View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5931-Insertion-11 (Length: 220)

Name: NF5931-Insertion-11
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5931-Insertion-11
NF5931-Insertion-11
[»] chr3 (19 HSPs)
chr3 (9-220)||(10554960-10555171)
chr3 (13-220)||(55291789-55291996)
chr3 (8-220)||(46722774-46722986)
chr3 (15-220)||(43929050-43929255)
chr3 (80-220)||(43549843-43549983)
chr3 (13-195)||(10833511-10833694)
chr3 (13-195)||(6805134-6805316)
chr3 (181-220)||(42353-42392)
chr3 (181-220)||(18890249-18890288)
chr3 (13-60)||(43549985-43550032)
chr3 (181-219)||(16324729-16324767)
chr3 (181-216)||(3803639-3803674)
chr3 (181-216)||(12305888-12305923)
chr3 (181-220)||(14641738-14641777)
chr3 (181-220)||(18893508-18893547)
chr3 (181-216)||(54521588-54521623)
chr3 (179-216)||(5224146-5224183)
chr3 (179-216)||(22652595-22652632)
chr3 (179-216)||(26054626-26054663)
[»] chr2 (14 HSPs)
chr2 (9-220)||(20590470-20590681)
chr2 (13-220)||(149695-149902)
chr2 (14-220)||(41301117-41301327)
chr2 (13-195)||(1383859-1384041)
chr2 (18-220)||(28345225-28345426)
chr2 (13-195)||(36734659-36734840)
chr2 (181-220)||(13100922-13100961)
chr2 (181-220)||(21072876-21072915)
chr2 (181-216)||(10684124-10684159)
chr2 (181-216)||(20261985-20262020)
chr2 (181-216)||(23338591-23338626)
chr2 (179-216)||(18358160-18358197)
chr2 (179-216)||(25184011-25184048)
chr2 (171-215)||(19647048-19647092)
[»] chr4 (14 HSPs)
chr4 (9-220)||(16277475-16277686)
chr4 (9-220)||(53387085-53387296)
chr4 (13-220)||(35660543-35660751)
chr4 (22-220)||(19434848-19435046)
chr4 (76-220)||(14549368-14549513)
chr4 (103-220)||(16296617-16296734)
chr4 (13-109)||(630162-630258)
chr4 (181-220)||(9638833-9638872)
chr4 (181-220)||(28386069-28386108)
chr4 (181-216)||(15534947-15534982)
chr4 (181-216)||(33849568-33849603)
chr4 (181-216)||(36038636-36038671)
chr4 (181-216)||(49547135-49547170)
chr4 (179-216)||(10694438-10694475)
[»] chr7 (26 HSPs)
chr7 (9-220)||(14105615-14105826)
chr7 (9-220)||(17505152-17505363)
chr7 (9-220)||(17547851-17548062)
chr7 (13-220)||(14415632-14415839)
chr7 (13-220)||(13647939-13648146)
chr7 (13-220)||(19194848-19195055)
chr7 (17-220)||(4325757-4325960)
chr7 (13-220)||(12754854-12755061)
chr7 (13-220)||(39431375-39431583)
chr7 (13-195)||(708728-708910)
chr7 (13-220)||(44190404-44190604)
chr7 (13-220)||(37539105-37539311)
chr7 (13-195)||(16462733-16462915)
chr7 (76-219)||(47975081-47975225)
chr7 (37-195)||(25942158-25942317)
chr7 (13-213)||(24270142-24270337)
chr7 (181-220)||(11661931-11661970)
chr7 (181-220)||(14188481-14188520)
chr7 (181-220)||(17070479-17070518)
chr7 (13-62)||(11309814-11309863)
chr7 (181-216)||(16108050-16108085)
chr7 (181-216)||(23664314-23664349)
chr7 (181-216)||(29797376-29797411)
chr7 (181-216)||(29801195-29801230)
chr7 (176-218)||(13256513-13256555)
chr7 (179-216)||(1856592-1856629)
[»] chr5 (16 HSPs)
chr5 (13-220)||(24668345-24668552)
chr5 (13-220)||(24738114-24738321)
chr5 (13-220)||(24750883-24751090)
chr5 (17-219)||(18419113-18419315)
chr5 (13-220)||(36508932-36509139)
chr5 (112-220)||(24594251-24594359)
chr5 (13-213)||(16604759-16604959)
chr5 (13-117)||(24617174-24617278)
chr5 (13-117)||(24746433-24746537)
chr5 (13-117)||(24713405-24713509)
chr5 (181-220)||(9776931-9776970)
chr5 (181-220)||(27868762-27868801)
chr5 (181-220)||(41875780-41875819)
chr5 (181-220)||(33472751-33472790)
chr5 (181-216)||(37804264-37804299)
chr5 (179-216)||(17011550-17011587)
[»] chr1 (11 HSPs)
chr1 (13-220)||(23194700-23194906)
chr1 (13-220)||(22130213-22130420)
chr1 (13-195)||(45574225-45574407)
chr1 (13-220)||(7052202-7052410)
chr1 (111-220)||(24723649-24723758)
chr1 (101-220)||(8306349-8306467)
chr1 (181-216)||(297181-297216)
chr1 (181-220)||(28313174-28313213)
chr1 (189-220)||(38056862-38056893)
chr1 (179-216)||(29763825-29763862)
chr1 (179-216)||(46197938-46197975)
[»] scaffold0151 (1 HSPs)
scaffold0151 (14-220)||(9753-9959)
[»] scaffold0016 (1 HSPs)
scaffold0016 (17-220)||(174296-174499)
[»] chr8 (8 HSPs)
chr8 (13-195)||(25483647-25483829)
chr8 (13-217)||(36732676-36732879)
chr8 (13-195)||(22483443-22483625)
chr8 (181-220)||(8413936-8413975)
chr8 (181-220)||(11775548-11775587)
chr8 (181-220)||(19882773-19882812)
chr8 (179-216)||(16198658-16198695)
chr8 (179-216)||(25657707-25657744)
[»] scaffold0334 (1 HSPs)
scaffold0334 (17-220)||(1786-1989)
[»] scaffold0026 (1 HSPs)
scaffold0026 (13-220)||(21778-21985)
[»] scaffold0070 (1 HSPs)
scaffold0070 (13-195)||(8754-8937)
[»] scaffold0364 (1 HSPs)
scaffold0364 (13-195)||(7830-8010)
[»] scaffold0555 (1 HSPs)
scaffold0555 (18-195)||(9004-9181)
[»] scaffold0040 (1 HSPs)
scaffold0040 (13-220)||(106350-106558)
[»] chr6 (11 HSPs)
chr6 (13-213)||(19234782-19234981)
chr6 (13-220)||(35057201-35057407)
chr6 (9-220)||(13285401-13285611)
chr6 (181-220)||(31021909-31021948)
chr6 (181-220)||(13765172-13765211)
chr6 (181-220)||(23956688-23956727)
chr6 (181-216)||(12942955-12942990)
chr6 (181-216)||(28288698-28288733)
chr6 (179-216)||(15891762-15891799)
chr6 (179-216)||(15900847-15900884)
chr6 (179-216)||(23415728-23415765)
[»] scaffold0149 (1 HSPs)
scaffold0149 (92-219)||(21275-21402)
[»] scaffold0058 (1 HSPs)
scaffold0058 (145-220)||(40000-40075)
[»] scaffold0086 (1 HSPs)
scaffold0086 (41-216)||(35679-35845)
[»] scaffold0676 (1 HSPs)
scaffold0676 (155-220)||(2612-2677)
[»] scaffold0462 (2 HSPs)
scaffold0462 (176-219)||(1089-1132)
scaffold0462 (176-219)||(6595-6638)
[»] scaffold0220 (1 HSPs)
scaffold0220 (181-220)||(13772-13811)
[»] scaffold0001 (2 HSPs)
scaffold0001 (181-220)||(169265-169304)
scaffold0001 (181-220)||(176618-176657)
[»] scaffold0328 (1 HSPs)
scaffold0328 (171-220)||(18831-18882)
[»] scaffold0453 (1 HSPs)
scaffold0453 (181-216)||(7202-7237)
[»] scaffold0422 (1 HSPs)
scaffold0422 (181-216)||(3789-3824)
[»] scaffold0061 (2 HSPs)
scaffold0061 (181-216)||(14779-14814)
scaffold0061 (181-216)||(23837-23872)
[»] scaffold0138 (1 HSPs)
scaffold0138 (179-216)||(20919-20956)
[»] scaffold0057 (1 HSPs)
scaffold0057 (179-216)||(70046-70083)
[»] scaffold0051 (1 HSPs)
scaffold0051 (179-216)||(31967-32004)
[»] scaffold0046 (1 HSPs)
scaffold0046 (179-216)||(21970-22007)
[»] scaffold0034 (1 HSPs)
scaffold0034 (179-216)||(29409-29446)
[»] scaffold1276 (1 HSPs)
scaffold1276 (176-220)||(960-1004)
[»] scaffold0213 (1 HSPs)
scaffold0213 (176-220)||(18934-18978)


Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 10554960 - 10555171
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 108  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10554960 aaacagacgcaagaacataaaacaaggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 10555059  T
Q  109 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10555060 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctaccgaaaccccaaatttgat 10555159  T
Q  209 aggaaacttaac 220  Q
    ||||||||||||    
T  10555160 aggaaacttaac 10555171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 55291996 - 55291789
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  55291996 agacgcaagaacataaaacagggtatgttgtcactgggcaatttcgctaatggcgaaaagtgagctaatagcgaaatagttatagggagtttcgctaata 55291897  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  55291896 gtgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccaaaaaaaccaaatttcatcaacccaaaccccaaatttgatagga 55291797  T
Q  213 aacttaac 220  Q
    ||||||||    
T  55291796 aacttaac 55291789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 46722986 - 46722774
Alignment:
Q  8 aaaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgc 107  Q
    |||| |||| |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46722986 aaaaaagacacaagaacataaaacagggtatgctgtcactgggcaagttcgctaatggcgaaaagtgagctaatagcgaaatagttacagggagtttcgc 46722887  T
Q  108 taatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttga 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||| |||||||||||||||    
T  46722886 taatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccaaaaaaaacaaatttcagcaaccgaaaccccaaatttga 46722787  T
Q  208 taggaaacttaac 220  Q
    |||||||||||||    
T  46722786 taggaaacttaac 46722774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 43929050 - 43929255
Alignment:
Q  15 acgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagc 114  Q
    ||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||  | ||||||||||||||| ||||||| | ||||||| ||||||    
T  43929050 acgcaagaacataaaacagagtatgctgtcactgagcaatttcgctaatggcgaaatgttagctaatagcgaaattgttacagagtgtttcgccaatagc 43929149  T
Q  115 gaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaa 214  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||    
T  43929150 gaactcctagcgagtttttcccctgctgttacgatttctgcacatttttcacccaaaaaaaccaaattccatctacccaaatcccaaatttgataggaaa 43929249  T
Q  215 cttaac 220  Q
    ||||||    
T  43929250 cttaac 43929255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 43549983 - 43549843
Alignment:
Q  80 atagcgaaatagttacagggagtttcgctaatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaa 179  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  43549983 atagcgaaatagttacagggagtttcgctaatagcgaaatcctagcgagtttttcccttgctgttacgatttctgcacatttttcacccaaaaaaaccaa 43549884  T
Q  180 atttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  43549883 atttcatctacccaaatcccaaatttgataggaaacttaac 43549843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 10833694 - 10833511
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaat-ttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaat 111  Q
    ||||||||||||   || ||||| ||||||||||||| || | || ||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  10833694 agacgcaagaacgcgaaacagggtatgctgtcactggacagtatttgctgatagcgaaaagtgagctaatagcgaaatagttacagggagtttcgctaat 10833595  T
Q  112 agcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  10833594 agcgaaatcctagcgagtttttccattgctgttacgatttctgcacatttttcacccaaaaaaaccaaatttcatctacccaaa 10833511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 6805316 - 6805134
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| |  || |||||||||||  ||||||||| |||| || |||| | ||||||||||||||| ||||||| | ||||||| ||||    
T  6805316 agacgcaagaacataaaactaggtatgctgtcactatgcaatttcggtaatagcaaaaagttagctaatagcgaaattgttacagagggtttcgccaata 6805217  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    ||||| | ||| |||||||||||| | ||||||||||||||||||| ||||||| || |||| |||||||| |||||||||||    
T  6805216 gcgaatttctaacgagtttttcccctactgttacgatttctgcacatttttcactcaaaaaatccaaattttatctacccaaa 6805134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 42353 - 42392
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  42353 tttcatccacccaaaccccaaatttgataggaaacttaac 42392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 18890249 - 18890288
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  18890249 tttcatccacccaaaccccaaatttgataggaaacttaac 18890288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 43550032 - 43549985
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgct 60  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  43550032 agacgcaagaacataaaacagggtatgctgccactgggcaatttcgct 43549985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 16324767 - 16324729
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaa 219  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  16324767 tttcatccacccaaaccccaaatttgataggaaacttaa 16324729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 3803639 - 3803674
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3803639 tttcatccacccaaaccccaaatttgataggaaact 3803674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 12305888 - 12305923
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  12305888 tttcatccacccaaaccccaaatttgataggaaact 12305923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 14641777 - 14641738
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  14641777 tttcatccacccaaatcccaaatttgataggaaacttaac 14641738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 18893508 - 18893547
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  18893508 tttcatccacccaaaccccaaatttgatagaaaacttaac 18893547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 54521588 - 54521623
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  54521588 tttcatccacccaaaccccaaatttgataggaaact 54521623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 5224146 - 5224183
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  5224146 aatttcatcaacccaaatcccaaatttgataggaaact 5224183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 22652595 - 22652632
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  22652595 aatttcatcaacccaaatcccaaatttgataggaaact 22652632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 26054663 - 26054626
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  26054663 aatttcatcaacccaaatcccaaatttgataggaaact 26054626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 20590681 - 20590470
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 108  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20590681 aaacagacgcaagaacataaaacagggaatgctgtcactggtcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 20590582  T
Q  109 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20590581 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 20590482  T
Q  209 aggaaacttaac 220  Q
    || |||||||||    
T  20590481 agaaaacttaac 20590470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 149902 - 149695
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||||| | ||||| | ||||||||||||    
T  149902 agacgcaagaacataaaacagggtatgctgtcactgtgcaatttcgctaatggcgaaaagttagctaatagcgaaattgctacagagggtttcgctaata 149803  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| ||||||||||| |||| ||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  149802 gcgaacttctagcgagtttctcccctgctgttacgatttccgcacatttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgatagga 149703  T
Q  213 aacttaac 220  Q
    ||||||||    
T  149702 aacttaac 149695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 41301327 - 41301117
Alignment:
Q  14 gacgcaagaacataaagcagggaatgctgtcactgggcaatt----tcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgcta 109  Q
    ||||||| |||||||| || || |||||||||||| ||||||    ||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  41301327 gacgcaaaaacataaaacaaggtatgctgtcactgagcaattaatttcgctgatagcgaaaagtgagctaatagcgaaatagttacagggagtttcgcta 41301228  T
Q  110 atagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgata 209  Q
    |||||||| |||||||||||||||||||||||  ||||| ||||||||| |||||||||| |||| |||||||||||||||||||| ||||| |||||||    
T  41301227 atagcgaaatcctagcgagtttttcccttgctactacgacttctgcacatttttcacccaaaaaatccaaatttcatctacccaaatcccaattttgata 41301128  T
Q  210 ggaaacttaac 220  Q
    |||||||||||    
T  41301127 ggaaacttaac 41301117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 1384041 - 1383859
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||| ||||| || ||||| |||||||||||  |||||||||||||||||||||| | ||||||| ||||||| ||||||| |  |||||| ||||    
T  1384041 agacgcaaaaacatgaaacagggtatgctgtcactttgcaatttcgctaatggcgaaaagttagctaatcgcgaaatcgttacagaggatttcgccaata 1383942  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    ||||||| ||||||||||| || | ||||||||||||||||||||| |||||||||| ||||  |||||||||||||||||||    
T  1383941 gcgaacttctagcgagtttctctcctgctgttacgatttctgcacatttttcacccaaaaaacacaaatttcatctacccaaa 1383859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 28345426 - 28345225
Alignment:
Q  18 caagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaa-actgagctaatagcgaaatagttacagggagtttcgctaatagcga 116  Q
    ||||||||| || ||||| |||||||||||| |||||||||||||||||||||  ||| |||| ||||||||| ||||||| |  |||||| ||||||||    
T  28345426 caagaacatgaatcagggtatgctgtcactgtgcaatttcgctaatggcgaaactctg-gctattagcgaaattgttacagaggatttcgccaatagcga 28345328  T
Q  117 actcctagcgagtttttcccttgctgttacgatttctgcaca-attttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaac 215  Q
    ||| |||||||| ||||||| |||||||||||||||| ||||  |||||||||| |||| |||||||| ||||||| ||| |||||||||||||||||||    
T  28345327 acttctagcgag-ttttcccatgctgttacgatttctacacactttttcaccca-aaaacccaaattttatctacctaaatcccaaatttgataggaaac 28345230  T
Q  216 ttaac 220  Q
    |||||    
T  28345229 ttaac 28345225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 36734840 - 36734659
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||| | ||| |||||| | ||||||||||||||||||||||   ||||| | | ||||| ||||||| |  |||||| ||||    
T  36734840 agacgcaagaacataaaacagagtatgttgtcacagtgcaatttcgctaatggcgaaaatctagctattggtgaaattgttacagaggatttcgccaata 36734741  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcaca-attttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    ||||||| |||||||| ||||||| ||||||||| |||||| ||||  |||||||| | |||| ||||||||||||||||||||    
T  36734740 gcgaacttctagcgag-ttttcccctgctgttacaatttctacacactttttcaccta-aaaacccaaatttcatctacccaaa 36734659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 13100961 - 13100922
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  13100961 tttcatccacccaaaccccaaatttgataggaaacttaac 13100922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 21072915 - 21072876
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  21072915 tttcatccacccaaaccccaaatttgataggaaacttaac 21072876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 10684159 - 10684124
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10684159 tttcatccacccaaaccccaaatttgataggaaact 10684124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 20261985 - 20262020
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20261985 tttcatccacccaaaccccaaatttgataggaaact 20262020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 23338626 - 23338591
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  23338626 tttcatccacccaaaccccaaatttgataggaaact 23338591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 18358197 - 18358160
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  18358197 aatttcatcaacccaaatcccaaatttgataggaaact 18358160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 25184011 - 25184048
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  25184011 aatttcatcaacccaaatcccaaatttgataggaaact 25184048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 19647048 - 19647092
Alignment:
Q  171 aaaaaccaaatttcatctacccaaaccccaaatttgataggaaac 215  Q
    ||||||| ||||||| ||||| ||| |||||||||||||||||||    
T  19647048 aaaaacccaatttcaactacctaaatcccaaatttgataggaaac 19647092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 16277686 - 16277475
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 108  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16277686 aaacagacggaagaacataaaacagggaatgctgtcactgggcaatttcgctaatggcgaaaactaagctaatagcgaaatagttacagggagtttcgct 16277587  T
Q  109 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16277586 aatagcgaactcctagcgagtttttcccttgctgttgcgatttctgcacaattttcacccagaaaaaccaattttcatctacccaaaccccaaatttgat 16277487  T
Q  209 aggaaacttaac 220  Q
    ||||||||||||    
T  16277486 aggaaacttaac 16277475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 53387296 - 53387085
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 108  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53387296 aaacagacgcaagaacataaaacagggaatgttgtcactggacaatttcgctaatggcgaaaactgagcgaatagcgaaatagttacagggagtttcgct 53387197  T
Q  109 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 208  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  53387196 aatagcgaactcctagcgagtttttcccttactgttacgatttctgcacaattttcacccagaaaaaccaattttcatctacccaaaccccaaatttgat 53387097  T
Q  209 aggaaacttaac 220  Q
    ||||||||||||    
T  53387096 aggaaacttaac 53387085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 35660543 - 35660751
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| || || |||||||||||| ||||||||||||||||| |||| | ||| ||||||||||| ||||||| |  |||||| ||||    
T  35660543 agacgcaagaacataaaacatggtatgctgtcactgtgcaatttcgctaatggcaaaaagttagcgaatagcgaaattgttacagaggatttcgccaata 35660642  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaa-ccaaatttcatctacccaaaccccaaatttgatagg 211  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||| |||||||||||||||    
T  35660643 gcgaacttctagcgagtttttcccctgctgttacgatttctgcacatttttcaccaaaaaaaacccaaatttcatctacccaaatcccaaatttgatagg 35660742  T
Q  212 aaacttaac 220  Q
    |||||||||    
T  35660743 aaacttaac 35660751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 19435046 - 19434848
Alignment:
Q  22 aacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagcgaactcc 121  Q
    |||||||| ||| | ||| |||||||| |||||||||||||| ||||| |   ||||||||||||||| ||||||| | | ||||| |||||| |||| |    
T  19435046 aacataaaacagagtatgttgtcactgtgcaatttcgctaatagcgaacaggtagctaatagcgaaattgttacagagggattcgccaatagcaaacttc 19434947  T
Q  122 tagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||||| ||||  ||||||||||||||| ||| ||||||||||||||||||||||||    
T  19434946 tagcgagtttttcccctactgttacgatttctgcacatttttcacccaaaaaactcaaatttcatctaccaaaatcccaaatttgataggaaacttaac 19434848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 14549368 - 14549513
Alignment:
Q  76 gctaatagcgaaatagttacagggagtttcgctaatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaa 175  Q
    |||||||||||||| ||||||| | | ||||| ||||| ||||| |||||||||||||||| | ||||||||||||||||||| |||||||||| |||||    
T  14549368 gctaatagcgaaattgttacagagggattcgccaatagagaacttctagcgagtttttcccctactgttacgatttctgcacatttttcacccaaaaaaa 14549467  T
Q  176 -ccaaatttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
     |||||||||||||||||||| ||||||||||||||||||||||||    
T  14549468 cccaaatttcatctacccaaatcccaaatttgataggaaacttaac 14549513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 16296617 - 16296734
Alignment:
Q  103 ttcgctaatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaa 202  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||| |||| | |||||| ||||||||||| ||||||    
T  16296617 ttcgccaatagcgaacttctagcgagtttttcccttactgttacaatttctgcacatttttcacccaaaaaaccaaaatttaatctacccaaatcccaaa 16296716  T
Q  203 tttgataggaaacttaac 220  Q
    ||||||||||||||||||    
T  16296717 tttgataggaaacttaac 16296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 630258 - 630162
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgcta 109  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  630258 agacgcaagaacataaaacagggtatgctgtcactgggcaatttcgctgatagcgaaaaatgagctaatagcgaaatagttacagggagtttcgcta 630162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 9638833 - 9638872
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  9638833 tttcatccacccaaaccccaaatttgataggaaacttaac 9638872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 28386069 - 28386108
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  28386069 tttcatccacccaaaccccaaatttgataggaaacttaac 28386108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 15534947 - 15534982
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15534947 tttcatccacccaaaccccaaatttgataggaaact 15534982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 33849568 - 33849603
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33849568 tttcatccacccaaaccccaaatttgataggaaact 33849603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 36038636 - 36038671
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36038636 tttcatccacccaaaccccaaatttgataggaaact 36038671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 49547170 - 49547135
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  49547170 tttcatccacccaaaccccaaatttgataggaaact 49547135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 10694475 - 10694438
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  10694475 aatttcatcaacccaaatcccaaatttgataggaaact 10694438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 1e-100; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 14105826 - 14105615
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 108  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14105826 aaactgacgcaagaacataaaatagggaatgctgtcactgggcaatttcgctaatggcgaaaagtgagctaatagcgaaatagttacagggagtttcgct 14105727  T
Q  109 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 208  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14105726 aatagcgaactcctaacgagtttttcccttgctgttacgatttctgcacaattttcacccaaaaaaaccaaatttcatcaacccaaaccccaaatttgat 14105627  T
Q  209 aggaaacttaac 220  Q
    ||||||||||||    
T  14105626 aggaaacttaac 14105615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 17505363 - 17505152
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 108  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  17505363 aaacagacgcaagaacataaaacagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaagagcgaaatagttacagggagttttgct 17505264  T
Q  109 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  17505263 aatagcgaactcctagcgagtttttcccatgctgttacgatttctgcacaattttcacctagaaaaaccaattttcatctacccaaactccaaatttgat 17505164  T
Q  209 aggaaacttaac 220  Q
    ||||||||||||    
T  17505163 aggaaacttaac 17505152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 17547851 - 17548062
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgct 108  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  17547851 aaacagacgcaagaacataaaacagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaagagcgaaatagttacagggagttttgct 17547950  T
Q  109 aatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgat 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  17547951 aatagcgaactcctagcgagtttttcccatgctgttacgatttctgcacaattttcacctagaaaaaccaattttcatctacccaaactccaaatttgat 17548050  T
Q  209 aggaaacttaac 220  Q
    ||||||||||||    
T  17548051 aggaaacttaac 17548062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 14415839 - 14415632
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14415839 agacgcaagaacataaaacagggtatgctgtcactaggcaagttcgctaatggcgaaaagtgagctaatagcgaaatagttacagggagtttcgctaata 14415740  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  14415739 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccaaaaaaaccaaatttcatcaacccaaaccccaaatttgatagga 14415640  T
Q  213 aacttaac 220  Q
    ||||||||    
T  14415639 aacttaac 14415632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 13647939 - 13648146
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||| |||||||||||| ||||| ||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13647939 agacacaagaacataaaacagggtatgctgtcactaggcaatttcgctagtagcgaaaagtgagctaatagcgaaatagttacagggagtttcgctaata 13648038  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  13648039 gcgaaatcctagcaagtttttcccttgctgttacgatttctgcacatttttcacccaaaaaaaccaaatttcatctacctaaatcccaaatttgatagga 13648138  T
Q  213 aacttaac 220  Q
    || |||||    
T  13648139 aatttaac 13648146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 19194848 - 19195055
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| ||||| |||||| |||||||||||||||||||||| | ||||| ||||||||| ||||||| |  |||||| ||||    
T  19194848 agacgcaagaacataaaacagggtatgctatcactgtgcaatttcgctaatggcgaaaagttagctagtagcgaaattgttacagaggatttcgccaata 19194947  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  19194948 gcgaacttctagcgagtttttcccctgctgttacgatttctgcacatttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgatagga 19195047  T
Q  213 aacttaac 220  Q
    ||||||||    
T  19195048 aacttaac 19195055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 17 - 220
Target Start/End: Original strand, 4325757 - 4325960
Alignment:
Q  17 gcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagcga 116  Q
    ||||||||||||| ||||  |||||||||||| |||||||||||||||||||||  | ||||||||| ||||| ||||||| | ||||||| ||||||||    
T  4325757 gcaagaacataaaacaggatatgctgtcactgagcaatttcgctaatggcgaaaggttagctaatagtgaaattgttacagagtgtttcgccaatagcga 4325856  T
Q  117 actcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaact 216  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||| ||||||| ||||||||||||||||||||    
T  4325857 attcctagcgagtttttcccttgctgttacgatttctgcacatttttcacctaaaaaacccaaatttcatccacccaaatcccaaatttgataggaaact 4325956  T
Q  217 taac 220  Q
    ||||    
T  4325957 taac 4325960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 12755061 - 12754854
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||||||||| ||  |||| |||||||||||| |||||||||||||| ||||||  | ||||||||||| ||| ||||||| | |||| |||||||    
T  12755061 agacgcaagaacatgaaatagggtatgctgtcactgtgcaatttcgctaatagcgaaacgttagctaatagcgcaattgttacagagggtttagctaata 12754962  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    || |||| |||||||||||||||| | ||||||||||||||||||| |||| || || |||| |||||||||||||||||||| ||||||||||||||||    
T  12754961 gcaaacttctagcgagtttttcccctactgttacgatttctgcacattttttactcaaaaaacccaaatttcatctacccaaatcccaaatttgatagga 12754862  T
Q  213 aacttaac 220  Q
    ||||||||    
T  12754861 aacttaac 12754854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 39431583 - 39431375
Alignment:
Q  13 agacgcaagaacataaagcaggga-atgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaat 111  Q
    ||||||||||||||||| |||||  ||| |||||||| ||||||||||||| ||| |||| | ||||||||||||||| |||| || | ||||||| |||    
T  39431583 agacgcaagaacataaaacaggggtatgttgtcactgtgcaatttcgctaacggcaaaaagttagctaatagcgaaattgttagagagggtttcgccaat 39431484  T
Q  112 agcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagg 211  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| |||||| ||| |||| ||||||||||| |||||||| |||| ||||||||||    
T  39431483 agcgaacttctagcgagtttttcccttgttgttacgatttctgcacatttttcatccaaaaaatccaaatttcatttacccaaatcccatatttgatagg 39431384  T
Q  212 aaacttaac 220  Q
    |||| ||||    
T  39431383 aaacataac 39431375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 708910 - 708728
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||| | ||||||||||||||| ||||||| | ||||| | ||||    
T  708910 agacgcaagaacataaaacagggtatgctgtcactgtgcaatttcgctaatagcgaaaagttagctaatagcgaaattgttacagagggtttcaccaata 708811  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    |  |||| ||||||||||||||||  |||||||||||||||||||| |||||||| | |||| ||||||||||||||||||||    
T  708810 gaaaacttctagcgagtttttcccccgctgttacgatttctgcacatttttcaccaaaaaaacccaaatttcatctacccaaa 708728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 44190604 - 44190404
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||| ||||||||  |||| |||||| ||||| |||||||||||||||||||||| | |||||||||| |||| ||||||||  ||||||| ||||    
T  44190604 agacgcaataacataaaatagggtatgctgccactgagcaatttcgctaatggcgaaaagttagctaatagcaaaattgttacaggaggtttcgccaata 44190505  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||||||||||||||||||||||||||||| ||||||||||       || ||| ||||||  ||||||||||||||||| |||| |||||||||||    
T  44190504 gcgaactcctagcgagtttttcccttgctgttatgatttctgca-------catccaaaaaaactgaatttcatctacccaaatcccacatttgatagga 44190412  T
Q  213 aacttaac 220  Q
    ||||||||    
T  44190411 aacttaac 44190404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 37539105 - 37539311
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||| ||||||||| || ||| | |||||||||||| ||||||||||||||||||||||   ||||| ||||||||| |||| || |  |||||| ||||    
T  37539105 agacccaagaacatgaaacagagtatgctgtcactgtgcaatttcgctaatggcgaaaatctagctattagcgaaattgttatagaggatttcgccaata 37539204  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcaca-attttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagg 211  Q
    ||||||| |||||||| ||||||| |||||||||||||||| ||||  |||||||||| |||| ||||||||||||||||||||  ||||||||||||||    
T  37539205 gcgaacttctagcgag-ttttcccatgctgttacgatttctacacactttttcaccca-aaaatccaaatttcatctacccaaattccaaatttgatagg 37539302  T
Q  212 aaacttaac 220  Q
    |||||||||    
T  37539303 aaacttaac 37539311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 16462733 - 16462915
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||| ||||||||||||  |||| |||||||||||| |||| ||||||||| ||||||| | ||||||||||||||| ||||||  | | ||||| ||||    
T  16462733 agacacaagaacataaaatagggcatgctgtcactgtgcaacttcgctaatagcgaaaagttagctaatagcgaaattgttacaaagggattcgccaata 16462832  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    ||||||| ||| | |||||||||  | || |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  16462833 gcgaacttctatcaagtttttccactacttttacgatttctgcacatttttcacccaaaaaaaccaaatttcatctacccaaa 16462915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 47975225 - 47975081
Alignment:
Q  76 gctaatagcgaaatagttacagggagtttcgctaatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaa 175  Q
    |||||||||||||| ||||||| | ||||||| ||||||||||| |||||||||||||||| | |||||||||||| |||||| |||||||| | |||||    
T  47975225 gctaatagcgaaattgttacagagggtttcgccaatagcgaacttctagcgagtttttcccctactgttacgatttttgcacatttttcaccgaaaaaaa 47975126  T
Q  176 -ccaaatttcatctacccaaaccccaaatttgataggaaacttaa 219  Q
     ||||||||||||||||||||  ||||||||||||| ||||||||    
T  47975125 cccaaatttcatctacccaaattccaaatttgatagaaaacttaa 47975081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 195
Target Start/End: Original strand, 25942158 - 25942317
Alignment:
Q  37 atgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagcgaactcctagcgagtttttccc 136  Q
    |||||||||||| ||||||||||||||| ||||||   |||||||| |||||| ||||||| |  |||| | ||||||||||| |||||||||||||| |    
T  25942158 atgctgtcactgtgcaatttcgctaatgtcgaaaatctagctaatatcgaaattgttacagaggatttcaccaatagcgaacttctagcgagtttttctc 25942257  T
Q  137 ttgctgttacgatttctgcacaattttcacccagaaaaa-ccaaatttcatctacccaaa 195  Q
     |||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||    
T  25942258 ctgctgttacgatttctacacatttttcacccaaaaaaacccaaatttcatctacccaaa 25942317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 24270337 - 24270142
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaa-ctgagctaatagcgaaatagttacagggagtttcgctaat 111  Q
    |||||||||||||| || || || ||| |||||||| ||||||| ||||| ||| |||| ||| |||| || |||||| ||||||| |  |||||| |||    
T  24270337 agacgcaagaacatgaaacaaggtatgttgtcactgtgcaattttgctaacggcaaaaatctg-gctattaccgaaattgttacagaggatttcgccaat 24270239  T
Q  112 agcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagg 211  Q
    |||||||| ||||||||||||||||      ||||||||||| |||| |||||||| | ||||  |||||||||||||| |||| |||||||||||||||    
T  24270238 agcgaacttctagcgagtttttccc-----cttacgatttctacacatttttcaccaaaaaaactcaaatttcatctactcaaatcccaaatttgatagg 24270144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 11661931 - 11661970
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  11661931 tttcatccacccaaaccccaaatttgataggaaacttaac 11661970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 14188520 - 14188481
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  14188520 tttcatccacccaaaccccaaatttgataggaaacttaac 14188481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 17070518 - 17070479
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  17070518 tttcatccacccaaaccccaaatttgataggaaacttaac 17070479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 11309814 - 11309863
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaa 62  Q
    |||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  11309814 agacgcaagaacatgaaacagagaatgctgtcactgtgcaatttcgctaa 11309863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 16108085 - 16108050
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16108085 tttcatccacccaaaccccaaatttgataggaaact 16108050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 23664349 - 23664314
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  23664349 tttcatccacccaaaccccaaatttgataggaaact 23664314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 29797376 - 29797411
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29797376 tttcatccacccaaaccccaaatttgataggaaact 29797411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 29801195 - 29801230
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29801195 tttcatccacccaaaccccaaatttgataggaaact 29801230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 13256513 - 13256555
Alignment:
Q  176 ccaaatttcatctacccaaaccccaaatttgataggaaactta 218  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||    
T  13256513 ccaattttcatcaacccaaatcccaaatttgataggaaactta 13256555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 1856629 - 1856592
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  1856629 aatttcatcaacccaaatcccaaatttgataggaaact 1856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 24668552 - 24668345
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24668552 agacgcaagaacataaaacagggaatgctgtcactgggcaaattcgctaatggcgaaaattgagctaatagcgaaatagttacagggagtttcgctaata 24668453  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24668452 gcgaactcctagcgagttttccccttgctgttacgatttatgcacaattttcacccaaaaaaaccaaatgtcatctacccaaaccccaaatttgatagga 24668353  T
Q  213 aacttaac 220  Q
    ||||||||    
T  24668352 aacttaac 24668345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 24738321 - 24738114
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24738321 agacgcaagaacataaaacagggaatgctgtcactgggcaaattcgctaatggcgaaaattgagctaatagcgaaatagttacagggagtttcgctaata 24738222  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24738221 gcgaactcctagcgagttttccccttgctgttacgatttatgcacaattttcacccaaaaaaaccaaatgtcatctacccaaaccccaaatttgatagga 24738122  T
Q  213 aacttaac 220  Q
    ||||||||    
T  24738121 aacttaac 24738114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 24751090 - 24750883
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24751090 agacgcaagaacataaaacagggaatgctgtcactgggcaaattcgctaatggcgaaaattgagctaatagcgaaatagttacagggagtttcgctaata 24750991  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24750990 gcgaactcctagcgagttttccccttgctgttacgatttatgcacaattttcacccaaaaaaaccaaatgtcatctacccaaaccccaaatttgatagga 24750891  T
Q  213 aacttaac 220  Q
    ||||||||    
T  24750890 aacttaac 24750883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 18419113 - 18419315
Alignment:
Q  17 gcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagcga 116  Q
    ||||||||||||| ||||| |||||||||||||||||||||| | || ||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  18419113 gcaagaacataaaacagggtatgctgtcactgggcaatttcgttgatagcgaaaagtgggctaatagcgaaatagttacagggagtttcgctaatagcga 18419212  T
Q  117 actcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaact 216  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  18419213 aatcctagcgagtttttcccttgctgttacgatttctgcacatttttcacccaaaaaaaccaaatttcatctacccaaatctcaaatttgataggaaact 18419312  T
Q  217 taa 219  Q
    |||    
T  18419313 taa 18419315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 36509139 - 36508932
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||||||||| || ||||| ||| ||||||| |||||||| |||||| ||||||| | ||||||||||||||| ||||||| | | ||||| ||||    
T  36509139 agacgcaagaacatgaaacagggtatgttgtcactaggcaattttgctaatagcgaaaagttagctaatagcgaaattgttacagagggattcgccaata 36509040  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| |||||||||| ||||| | |||||||||||||| |||| |||||||||| |||| |||||||| ||||||| ||| ||||||||||||||||    
T  36509039 gcgaacttctagcgagttcttcccctactgttacgatttctacacatttttcacccaaaaaacccaaatttgatctacctaaatcccaaatttgatagga 36508940  T
Q  213 aacttaac 220  Q
    ||||||||    
T  36508939 aacttaac 36508932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 24594359 - 24594251
Alignment:
Q  112 agcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24594359 agcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccaaaaaaaccaaatttcatctacccaaaccccaaatttgatagg 24594260  T
Q  212 aaacttaac 220  Q
    |||||||||    
T  24594259 aaacttaac 24594251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 16604959 - 16604759
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||||||    ||||||||||| || ||||||| |  |||||| ||||    
T  16604959 agacgcaagaacatgaaacagggtatgctgccactgtgcaatttcgctaatggcgaaaatcttgctaatagcgagattgttacagaggatttcgccaata 16604860  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| ||| |||||||||||| |||| ||||||||||| |||| |||||||||| |||| ||||||||||||||| |||| | ||||||||||||||    
T  16604859 gcgaacttctatcgagtttttcccctgctattacgatttcttcacatttttcacccaaaaaatccaaatttcatctactcaaatctcaaatttgatagga 16604760  T
Q  213 a 213  Q
    |    
T  16604759 a 16604759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 24617278 - 24617174
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  24617278 agacgcaagaacataaaacaaggaatgctgtcactgggcaatttcgctaatggcaaaaattgagctaatagcgaaatagttagagggagtttcgctaata 24617179  T
Q  113 gcgaa 117  Q
    |||||    
T  24617178 gcgaa 24617174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 24746537 - 24746433
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  24746537 agacgcaagaacataaaacaaggaatgctgtcactgggcaatttcgctaatggcaaaaattgagctaatagcgaaatagttagagggagtttcgctaata 24746438  T
Q  113 gcgaa 117  Q
    |||||    
T  24746437 gcgaa 24746433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 24713509 - 24713405
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |    
T  24713509 agacgcaagaacataaaacaaggaatgttgtcactgggcaatttcgctaatggcaaaaattgagctaatagcgaaatagttacagggagtttcgctaaaa 24713410  T
Q  113 gcgaa 117  Q
    |||||    
T  24713409 gcgaa 24713405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 9776931 - 9776970
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  9776931 tttcatccacccaaaccccaaatttgataggaaacttaac 9776970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 27868801 - 27868762
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  27868801 tttcatccacccaaaccccaaatttgataggaaacttaac 27868762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 41875819 - 41875780
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  41875819 tttcatccacccaaaccccaaatttgataggaaacttaac 41875780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 33472790 - 33472751
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  33472790 tttcatccacccaaatcccaaatttgataggaaacttaac 33472751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 37804299 - 37804264
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37804299 tttcatccacccaaaccccaaatttgataggaaact 37804264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 17011550 - 17011587
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  17011550 aatttcatcaacccaaatcccaaatttgataggaaact 17011587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 23194906 - 23194700
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  23194906 agacgcaagaacataaaacagggtatgctgtcactgggcaatttcgctaatggcgaaaagtgagctaatagcgaaatagttacagg-agtttcgctaata 23194808  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  23194807 gcgaactactagcgagtttttcccttgctgttacgatttctgcagaatttttacccaaaaaaaccaaatttcatctacccaaactccaaatttgatagga 23194708  T
Q  213 aacttaac 220  Q
    ||||||||    
T  23194707 aacttaac 23194700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 22130420 - 22130213
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||| ||||||||||| ||||| |||||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22130420 agacgtaagaacataaaacagggtatgctgtcactgggcagtttcgctgatagcgaaaattgagctaatagcgaaatagttacagggagtttcgctaata 22130321  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  22130320 gcgaaatcctagcgagtttttcccttgctgttacgatttctgcatatttttcacccaaaaaaaccaaatttcatctacccaaatcccaaatttgatagga 22130221  T
Q  213 aacttaac 220  Q
    ||||||||    
T  22130220 aacttaac 22130213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 45574407 - 45574225
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45574407 agacgcaagaacataaaacagggtatgctgtcaccgggcaatttcgctgatagcgaaaagtgagctaatagcgaaatagttacagggagtttcgctaata 45574308  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  45574307 gcgaaatcctagcgagtttttcccttgctgttacgatttctgcacatttttcacccaaaaaaaccaaatttcatctacccaaa 45574225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 7052410 - 7052202
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||| | | ||||| ||||    
T  7052410 agacgcaagaacataaaacagtgtatgctgtcactgtgcaatttcgctaatggcgaaaagttagctaatagcgaaattgttacagagtgattcgccaata 7052311  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaa-ccaaatttcatctacccaaaccccaaatttgatagg 211  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||| |||||||    
T  7052310 gcgaacttctagcgagtttttcccctactgttacgatttctgcacatttttcacccaaaaaaacccaaatttcatctacccaaatcccaaatatgatagg 7052211  T
Q  212 aaacttaac 220  Q
    |||||||||    
T  7052210 aaacttaac 7052202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 24723758 - 24723649
Alignment:
Q  111 tagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatag 210  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||| ||||||||||||||    
T  24723758 tagcgaacttctagcgagtttttcccctgctgttacgatttctgcacatttttcacccaaaaaacccaaatttcatttacccaaatcccaaatttgatag 24723659  T
Q  211 gaaacttaac 220  Q
    ||||||||||    
T  24723658 gaaacttaac 24723649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 8306349 - 8306467
Alignment:
Q  101 gtttcgctaatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaacccca 200  Q
    ||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||| |||| | |||||||||||||||||| ||||    
T  8306349 gtttcgccaatagcgaactcctagcaagtttttcccctactgttacgatttctgcaca-ttttcacccaaaaaaccaaaatttcatctacccaaatccca 8306447  T
Q  201 aatttgataggaaacttaac 220  Q
    ||||||||||||||||||||    
T  8306448 aatttgataggaaacttaac 8306467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 297181 - 297216
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  297181 tttcatccacccaaaccccaaatttgataggaaact 297216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 28313174 - 28313213
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  28313174 tttcatccacccaaacctcaaatttgataggaaacttaac 28313213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Complemental strand, 38056893 - 38056862
Alignment:
Q  189 acccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||||||||||||||||||||||||||||    
T  38056893 acccaaaccccaaatttgataggaaacttaac 38056862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 29763862 - 29763825
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  29763862 aatttcatccacccaaatcccaaatttgataggaaact 29763825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 46197975 - 46197938
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  46197975 aatttcatcaacccaaatcccaaatttgataggaaact 46197938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 9753 - 9959
Alignment:
Q  14 gacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatag 113  Q
    |||||||||||||||| ||||  |||||||||||| | ||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9753 gacgcaagaacataaaacaggttatgctgtcactgagaaatttcgctgatagcgaaaattgagctaatagcgaaatagttacagggagtttcgctaatag 9852  T
Q  114 cgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaa 213  Q
    |||| |||||||||||||||||||||||  ||||| ||||||||| |||||||||| |||| |||||||||||||||||||| ||||| |||||||||||    
T  9853 cgaaatcctagcgagtttttcccttgctactacgacttctgcacatttttcacccaaaaaacccaaatttcatctacccaaatcccaattttgataggaa 9952  T
Q  214 acttaac 220  Q
    |||||||    
T  9953 acttaac 9959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 174499 - 174296
Alignment:
Q  17 gcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagcga 116  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||| | ||||||||||||||| |||||| || ||||||| ||||||||    
T  174499 gcaagaacataaaacagggtatgctgtcactgagcaatttcgctaaaggcgaaaagttagctaatagcgaaattgttacaaggggtttcgccaatagcga 174400  T
Q  117 actcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||||||||||||| ||| ||||||||||||| |||| |||||||| | ||||||||||||||||||||||||| | ||||||||||||||||||    
T  174399 actcctagcgagtttttccgttgttgttacgatttctacacatttttcacctaaaaaaaccaaatttcatctacccaaatctcaaatttgataggaaact 174300  T
Q  217 taac 220  Q
    ||||    
T  174299 taac 174296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 2e-63; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 25483829 - 25483647
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||||||||||||  |||| ||||||||||| |||||||||||| || ||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  25483829 agacgcaagaacataaaatagggtatgctgtcactaggcaatttcgctgatagcgaaaagtgagctaatagcaaaatagttaaagggagtttcgctaata 25483730  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||    
T  25483729 gcgaaatcctagcgagtttttcccttgctgttaccatttctgcacatttttcacccaaaaaaaacaaatttcatcttcccaaa 25483647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 13 - 217
Target Start/End: Complemental strand, 36732879 - 36732676
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| || || |||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||| |    |||| ||||    
T  36732879 agacgcaagaacataaaacaaggtatgctgtcactgtgcaatttcgctaatggcgaaaatttagctaatagcgaaattgttacagaggaaatcgccaata 36732780  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  36732779 gcgaacttctagcgagtttttccat-gctgttacgatttctgcacatttttcacccaaaaaacccaaatttcgtctacccaaatcccaaatttgatagga 36732681  T
Q  213 aactt 217  Q
    |||||    
T  36732680 aactt 36732676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 22483443 - 22483625
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||| |||||| || ||||| ||| |||||||| |||||||| |||||||||||||   ||||||||||||||| ||||||  |  ||| || ||||    
T  22483443 agacgcatgaacatgaaacagggtatgttgtcactgtgcaatttcactaatggcgaaaatctagctaatagcgaaattgttacataggattttgccaata 22483542  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaa-ccaaatttcatctacccaaa 195  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||    
T  22483543 gcgaacttctagcgag-ttttcccttgctgttacgatttctgcacatttatcacccaaaaaaacccaaatttcatctacccaaa 22483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 8413975 - 8413936
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  8413975 tttcatccacccaaaccccaaatttgataggaaacttaac 8413936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 11775548 - 11775587
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  11775548 tttcatccacccaaaccccaaatttgataggaaacttaac 11775587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 19882773 - 19882812
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  19882773 tttcatccacccaaaccccaaatttgataggaaacttaac 19882812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 16198658 - 16198695
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  16198658 aatttcatcaacccaaatcccaaatttgataggaaact 16198695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 25657744 - 25657707
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  25657744 aatttcatcaacccaaatcccaaatttgataggaaact 25657707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 17 - 220
Target Start/End: Original strand, 1786 - 1989
Alignment:
Q  17 gcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagcga 116  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||| | ||| ||||||||||| ||||||| | | ||||| ||||||||    
T  1786 gcaagaacataaaacagggtatgctgtcactgagcaatttcgctaatagcgaaaagttagcgaatagcgaaattgttacagagggattcgccaatagcga 1885  T
Q  117 actcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||| |||||||||||||||| | ||||||||||||||||||| |||||| ||| |||| ||||||||||| |||||||| ||||||||||||||||||||    
T  1886 acttctagcgagtttttcccctactgttacgatttctgcacatttttcatccaaaaaacccaaatttcatatacccaaatcccaaatttgataggaaact 1985  T
Q  217 taac 220  Q
    ||||    
T  1986 taac 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 21778 - 21985
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||||||||||||  |||| ||||||||||||  ||||||||||||| ||||||  | ||||||||||||||| ||||||  | ||||||| ||||    
T  21778 agacgcaagaacataaaatagggtatgctgtcactgtacaatttcgctaatagcgaaactttagctaatagcgaaattgttacaaagggtttcgccaata 21877  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  21878 gcgaacttctagcgagtttttcccccactgttacgatttctgcacatttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgatagga 21977  T
Q  213 aacttaac 220  Q
    ||||||||    
T  21978 aacttaac 21985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 8754 - 8937
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||||||||| || ||||| ||| ||||||   | |||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||    
T  8754 agacgcaagaacatgaaacagggtatgttgtcaccatgtaatttcgctaatggcgaaaacttagctaatagcgaaattgttacagagggtttcgctaata 8853  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttca-cccagaaaaaccaaatttcatctacccaaa 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || | |||||||||||||||||||||||||    
T  8854 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacatttttcatccaaaaaaaaccaaatttcatctacccaaa 8937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 7830 - 8010
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||| | ||| |||||| |||| |||| || | ||||||| ||||    
T  7830 agacgcaagaacataaaacagggtatgctgtcactgagcaattttgctaatggcgaaaagttagcgaatagcaaaattgtta-agagtgtttcgccaata 7928  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  7929 gcgatctcctagcgagtttttcccttgctgttacgatttctgcac-attttcacccaaaaaaaccaaatttcatctacccaaa 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 9181 - 9004
Alignment:
Q  18 caagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaatagcgaa 117  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||| ||||| | ||||||||||||||| ||||||| |  |||||| |||||||||    
T  9181 caagaacataaaacagggtatgctgtcactgtgcaatttcgctaatggtgaaaagttagctaatagcgaaattgttacagaggatttcgccaatagcgaa 9082  T
Q  118 ctcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaa 195  Q
    || |||||||||||||||| ||| |||||||||| |||| | |||||||||| |||| ||||||||||||||||||||    
T  9081 cttctagcgagtttttcccctgcagttacgatttatgcatatttttcacccaaaaaacccaaatttcatctacccaaa 9004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 106558 - 106350
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    ||||||||||||||||| ||||  ||| |||||||| |||||||||||||| ||||||| | ||| ||||||||||| ||||||| | | ||||| ||||    
T  106558 agacgcaagaacataaaacaggttatgttgtcactgtgcaatttcgctaatagcgaaaagttagccaatagcgaaattgttacagagggattcgccaata 106459  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaa-ccaaatttcatctacccaaaccccaaatttgatagg 211  Q
    |||||||  ||||||||||||||| | ||||||||||||||| ||| |||||||| | ||||| |||||||||||||||| ||  |||||||||||||||    
T  106458 gcgaactaatagcgagtttttcccctactgttacgatttctgaacatttttcacctaaaaaaacccaaatttcatctaccgaactcccaaatttgatagg 106359  T
Q  212 aaacttaac 220  Q
    |||||||||    
T  106358 aaacttaac 106350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 19234782 - 19234981
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaactgagctaatagcgaaatagttacagggagtttcgctaata 112  Q
    |||||||||||||| || ||||| ||| |||||||| |||||||||||||||||||||  || |||| | ||||||| ||||||| |  |||||| ||||    
T  19234782 agacgcaagaacatgaaacagggtatgttgtcactgtgcaatttcgctaatggcgaaatatg-gctatttgcgaaattgttacagaggatttcgccaata 19234880  T
Q  113 gcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatagga 212  Q
    ||||||| |||||||||||||||| || |||||||||||||||||| |||||||||| ||||  |||||||||||||| |||| ||||||||||||||||    
T  19234881 gcgaacttctagcgagtttttcccctgttgttacgatttctgcacatttttcacccaaaaaactcaaatttcatctactcaaatcccaaatttgatagga 19234980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 35057201 - 35057407
Alignment:
Q  13 agacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaa-ctgagctaatagcgaaatagttacagggagtttcgctaat 111  Q
    |||||||||||||| || ||||| |||||||||||| ||||||| |||||||||||||| ||| |||| ||| ||||| ||||||| |  |||||| |||    
T  35057201 agacgcaagaacatgaaacagggtatgctgtcactgtgcaattttgctaatggcgaaaatctg-gctattagtgaaattgttacagaggatttcgccaat 35057299  T
Q  112 agcgaactcctagcgagtttttcccttgctgttacgatttctgcaca-attttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgatag 210  Q
    |||||||| |||||||| ||||||| ||||||||| ||||||  |||  |||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  35057300 agcgaacttctagcgag-ttttcccctgctgttacaatttctaaacactttttcaccca-aaaatccaaatttcatctacccaaatcccaaatttgatag 35057397  T
Q  211 gaaacttaac 220  Q
     |||||||||    
T  35057398 aaaacttaac 35057407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 13285401 - 13285611
Alignment:
Q  9 aaacagacgcaagaacataaagcagggaatgctgtcactgggcaatttcgctaatggcgaaaa-ctgagctaatagcgaaatagttacagggagtttcgc 107  Q
    |||||||||||||||||| || || || ||| ||||| || |||||||||||||||||||||| |||  ||| | ||||||| ||||||| |  ||||||    
T  13285401 aaacagacgcaagaacatgaaacatggtatgatgtcattgtgcaatttcgctaatggcgaaaatctgt-ctattcgcgaaattgttacagaggatttcgc 13285499  T
Q  108 taatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaatttt-cacccagaaaaaccaaatttcatctacccaaaccccaaatttg 206  Q
     |||||| |||| |||||||||||| | ||  |||||||||||||| |||| |||| | |||| |||| ||||||||||||   ||||| ||| ||||||    
T  13285500 caatagcaaacttctagcgagttttccgcta-ctgttacgatttctacacactttttcgccca-aaaacccaaatttcatcattccaaatccctaatttg 13285597  T
Q  207 ataggaaacttaac 220  Q
    ||||||||||||||    
T  13285598 ataggaaacttaac 13285611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 31021948 - 31021909
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31021948 tttcatctacccaaaccccaaatttgataggaaacttaac 31021909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 13765172 - 13765211
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  13765172 tttcatccacccaaaccccaaatttgataggaaacttaac 13765211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 23956688 - 23956727
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  23956688 tttcatccacccaaaccccaaatttgataggaaacttaac 23956727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 12942955 - 12942990
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  12942955 tttcatccacccaaaccccaaatttgataggaaact 12942990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 28288733 - 28288698
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28288733 tttcatccacccaaaccccaaatttgataggaaact 28288698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 15891799 - 15891762
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  15891799 aatttcatcaacccaaatcccaaatttgataggaaact 15891762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 15900884 - 15900847
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  15900884 aatttcatcaacccaaatcccaaatttgataggaaact 15900847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 23415728 - 23415765
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  23415728 aatttcatcaacccaaatcccaaatttgataggaaact 23415765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 21275 - 21402
Alignment:
Q  92 ttacagggagtttcgctaatagcgaactcctagcgagtttttcccttgctgttacgatttctgcacaattttcacccagaaaaaccaaatttcatctacc 191  Q
    |||||| | |||| || ||||||||||| |||||||||||||||| |  |||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  21275 ttacagagggttttgccaatagcgaacttctagcgagtttttcccctattgttacgatttctgcacatttttcacccaaaaaaaccaaatttcatatacc 21374  T
Q  192 caaaccccaaatttgataggaaacttaa 219  Q
    |||| |||||||||||||| ||||||||    
T  21375 caaatcccaaatttgatagaaaacttaa 21402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 40075 - 40000
Alignment:
Q  145 acgatttctgcacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    |||| ||||||||| |||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  40075 acgacttctgcacatttttcacccaaaaaacccaaatttcatctacccaaatcccaattttgataggaaacttaac 40000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 216
Target Start/End: Complemental strand, 35845 - 35679
Alignment:
Q  41 tgtcactgggcaatttcgctaatggcgaaaa-ctgagctaatagcgaaatagttacagggagtttcgctaatagcgaactcctagcgagtttttcccttg 139  Q
    |||||||  |||||||||||||||||||||| |||| ||||||||||||| ||||||| |  |||||| ||||| ||||| |||||||| ||||| | ||    
T  35845 tgtcactatgcaatttcgctaatggcgaaaatctga-ctaatagcgaaattgttacagaggatttcgccaatagagaacttctagcgag-ttttctcctg 35748  T
Q  140 ctgttacgatttctgcaca-attttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaact 216  Q
    |||||||||||||| ||||  |||||||         |||||||| |||||||||||  |||||||||||||||||||    
T  35747 ctgttacgatttctacacattttttcac---------ccaaattttatctacccaaattccaaatttgataggaaact 35679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 2612 - 2677
Alignment:
Q  155 cacaattttcacccagaaaaaccaaatttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    |||| |||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  2612 cacatttttcacccaaaaaacccaaatttcatctactcaaatcccaaatttgataggaaacttaac 2677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 1089 - 1132
Alignment:
Q  176 ccaaatttcatctacccaaaccccaaatttgataggaaacttaa 219  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  1089 ccaaatttcatctacccaaatccaaaatttgataggaaacttaa 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 6595 - 6638
Alignment:
Q  176 ccaaatttcatctacccaaaccccaaatttgataggaaacttaa 219  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  6595 ccaaatttcatctacccaaatccaaaatttgataggaaacttaa 6638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 13772 - 13811
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  13772 tttcatccacccaaaccccaaatttgataggaaacttaac 13811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 169265 - 169304
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  169265 tttcatccacccaaaccccaaatttgataggaaacttaac 169304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 176618 - 176657
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  176618 tttcatccacccaaaccccaaatttgataggaaacttaac 176657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 18882 - 18831
Alignment:
Q  171 aaaaaccaaa--tttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||||||  ||||||| ||||||||| ||||||||||||||||||||||    
T  18882 aaaaaccaaaattttcatccacccaaaccacaaatttgataggaaacttaac 18831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 7237 - 7202
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7237 tttcatccacccaaaccccaaatttgataggaaact 7202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 3789 - 3824
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3789 tttcatccacccaaaccccaaatttgataggaaact 3824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 14814 - 14779
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  14814 tttcatccacccaaaccccaaatttgataggaaact 14779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 23872 - 23837
Alignment:
Q  181 tttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  23872 tttcatccacccaaaccccaaatttgataggaaact 23837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 20919 - 20956
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  20919 aatttcatcaacccaaatcccaaatttgataggaaact 20956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 70083 - 70046
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  70083 aatttcatcaacccaaatcccaaatttgataggaaact 70046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 31967 - 32004
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  31967 aatttcatcaacccaaatcccaaatttgataggaaact 32004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22007 - 21970
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  22007 aatttcatcaacccaaatcccaaatttgataggaaact 21970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 29446 - 29409
Alignment:
Q  179 aatttcatctacccaaaccccaaatttgataggaaact 216  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  29446 aatttcatcaacccaaatcccaaatttgataggaaact 29409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 960 - 1004
Alignment:
Q  176 ccaaatttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    |||| ||||| | ||||||| ||||||||||||||||||||||||    
T  960 ccaattttcaccaacccaaatcccaaatttgataggaaacttaac 1004  T

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Target: scaffold0213 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 18934 - 18978
Alignment:
Q  176 ccaaatttcatctacccaaaccccaaatttgataggaaacttaac 220  Q
    ||||||||||||||||| || |  |||||||||||||||||||||    
T  18934 ccaaatttcatctaccctaatcaaaaatttgataggaaacttaac 18978  T

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