View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5931-Insertion-2 (Length: 695)

Name: NF5931-Insertion-2
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5931-Insertion-2
NF5931-Insertion-2
[»] chr2 (34 HSPs)
chr2 (9-695)||(44714153-44714838)
chr2 (9-283)||(44703861-44704135)
chr2 (657-695)||(39423907-39423945)
chr2 (658-695)||(3555249-3555286)
chr2 (658-695)||(36755480-36755517)
chr2 (656-695)||(15848480-15848519)
chr2 (649-692)||(39498674-39498717)
chr2 (657-695)||(11163415-11163453)
chr2 (658-695)||(2318902-2318939)
chr2 (662-695)||(6588686-6588719)
chr2 (658-695)||(15848087-15848124)
chr2 (658-695)||(16099416-16099453)
chr2 (658-695)||(34447812-34447849)
chr2 (657-694)||(34448188-34448225)
chr2 (658-695)||(36382519-36382556)
chr2 (658-695)||(37895346-37895383)
chr2 (654-695)||(44045394-44045435)
chr2 (660-692)||(2318160-2318192)
chr2 (659-695)||(10713115-10713151)
chr2 (656-692)||(36382158-36382194)
chr2 (659-690)||(30729621-30729652)
chr2 (657-695)||(6657876-6657914)
chr2 (657-695)||(25231240-25231278)
chr2 (661-695)||(36480110-36480144)
chr2 (658-692)||(45556111-45556145)
chr2 (654-695)||(6658239-6658280)
chr2 (655-692)||(10712719-10712756)
chr2 (662-695)||(37895739-37895772)
chr2 (658-695)||(45556439-45556476)
chr2 (659-695)||(9076459-9076495)
chr2 (659-695)||(16099055-16099091)
chr2 (659-695)||(25230102-25230138)
chr2 (648-695)||(36479706-36479754)
chr2 (658-694)||(44044113-44044149)
[»] chr7 (42 HSPs)
chr7 (648-695)||(45010996-45011043)
chr7 (649-695)||(27396987-27397033)
chr7 (655-695)||(5457299-5457339)
chr7 (657-695)||(28469400-28469438)
chr7 (654-695)||(17102381-17102422)
chr7 (658-695)||(24389177-24389214)
chr7 (658-695)||(28469009-28469046)
chr7 (658-694)||(10936187-10936223)
chr7 (655-695)||(48788799-48788839)
chr7 (657-692)||(17886885-17886920)
chr7 (656-695)||(28105498-28105537)
chr7 (649-695)||(10935784-10935830)
chr7 (649-695)||(42019588-42019633)
chr7 (657-695)||(42731811-42731849)
chr7 (658-695)||(2640177-2640214)
chr7 (658-695)||(6253832-6253869)
chr7 (658-695)||(6571012-6571049)
chr7 (658-695)||(17102019-17102056)
chr7 (658-695)||(22871669-22871706)
chr7 (658-695)||(27991738-27991775)
chr7 (658-695)||(29141568-29141605)
chr7 (658-695)||(32298776-32298813)
chr7 (659-692)||(37657232-37657265)
chr7 (659-695)||(18670255-18670291)
chr7 (655-695)||(20426722-20426762)
chr7 (659-691)||(40380080-40380112)
chr7 (662-694)||(42019990-42020022)
chr7 (659-691)||(42362450-42362482)
chr7 (659-695)||(42731419-42731455)
chr7 (660-695)||(6253472-6253507)
chr7 (660-695)||(23181386-23181421)
chr7 (656-695)||(24388816-24388855)
chr7 (658-693)||(27396628-27396663)
chr7 (656-695)||(29144374-29144413)
chr7 (648-691)||(32299101-32299144)
chr7 (664-695)||(40379774-40379805)
chr7 (654-695)||(13386139-13386180)
chr7 (658-695)||(19204488-19204525)
chr7 (662-695)||(27992100-27992133)
chr7 (658-695)||(32053142-32053179)
chr7 (662-691)||(37656855-37656884)
chr7 (659-695)||(43123175-43123211)
[»] chr6 (24 HSPs)
chr6 (649-695)||(8090319-8090365)
chr6 (656-695)||(33647343-33647382)
chr6 (657-695)||(30726151-30726189)
chr6 (658-695)||(3059648-3059685)
chr6 (654-691)||(12081032-12081069)
chr6 (658-695)||(21628105-21628142)
chr6 (658-695)||(33517926-33517963)
chr6 (643-695)||(3059241-3059293)
chr6 (657-695)||(681120-681158)
chr6 (657-695)||(30337447-30337485)
chr6 (657-695)||(30804253-30804291)
chr6 (657-694)||(12408564-12408601)
chr6 (658-695)||(17734195-17734232)
chr6 (654-695)||(26463174-26463215)
chr6 (659-695)||(26464591-26464627)
chr6 (659-695)||(30337810-30337846)
chr6 (659-690)||(15115339-15115370)
chr6 (661-695)||(11434804-11434838)
chr6 (661-695)||(12080638-12080672)
chr6 (657-695)||(13379874-13379912)
chr6 (658-695)||(679865-679902)
chr6 (662-691)||(22617886-22617915)
chr6 (659-692)||(30725760-30725793)
chr6 (659-695)||(15116624-15116660)
[»] chr1 (57 HSPs)
chr1 (649-695)||(23209719-23209765)
chr1 (654-695)||(30711719-30711760)
chr1 (655-695)||(43759214-43759254)
chr1 (648-695)||(13914057-13914104)
chr1 (655-694)||(34464842-34464881)
chr1 (648-695)||(37578181-37578228)
chr1 (657-695)||(19515817-19515855)
chr1 (645-695)||(24009561-24009611)
chr1 (657-695)||(36694280-36694318)
chr1 (657-695)||(36710381-36710419)
chr1 (658-695)||(7820953-7820990)
chr1 (658-695)||(17661851-17661888)
chr1 (654-695)||(34464444-34464485)
chr1 (654-695)||(35152338-35152379)
chr1 (654-695)||(35473626-35473667)
chr1 (658-695)||(40772851-40772888)
chr1 (659-695)||(6367562-6367598)
chr1 (658-694)||(19017628-19017664)
chr1 (659-694)||(30711327-30711362)
chr1 (660-695)||(35152722-35152757)
chr1 (657-695)||(5734008-5734046)
chr1 (657-691)||(36694644-36694678)
chr1 (657-691)||(36710745-36710779)
chr1 (657-695)||(41098731-41098769)
chr1 (657-695)||(42533022-42533060)
chr1 (658-695)||(6367954-6367991)
chr1 (658-695)||(17662242-17662279)
chr1 (662-695)||(17692577-17692610)
chr1 (658-695)||(25647883-25647920)
chr1 (654-695)||(31197060-31197101)
chr1 (658-695)||(37578584-37578621)
chr1 (662-695)||(40435348-40435381)
chr1 (658-691)||(48779515-48779548)
chr1 (659-695)||(6518188-6518224)
chr1 (659-695)||(26024784-26024820)
chr1 (659-695)||(34849011-34849047)
chr1 (659-695)||(34850457-34850493)
chr1 (659-695)||(40772507-40772543)
chr1 (659-695)||(46899061-46899097)
chr1 (660-695)||(4960541-4960576)
chr1 (655-693)||(183586-183624)
chr1 (660-690)||(13914464-13914494)
chr1 (662-692)||(23209365-23209395)
chr1 (661-695)||(42248475-42248509)
chr1 (657-695)||(47999484-47999522)
chr1 (658-691)||(5735107-5735140)
chr1 (656-689)||(19018027-19018060)
chr1 (658-695)||(26024422-26024459)
chr1 (662-695)||(40210373-40210406)
chr1 (658-695)||(46899992-46900029)
chr1 (659-692)||(47999123-47999156)
chr1 (666-695)||(49723118-49723147)
chr1 (659-695)||(183221-183257)
chr1 (649-689)||(2828183-2828223)
chr1 (659-695)||(32917652-32917688)
chr1 (661-693)||(40210764-40210796)
chr1 (661-689)||(40439587-40439615)
[»] chr8 (40 HSPs)
chr8 (654-695)||(16388578-16388619)
chr8 (654-695)||(33357493-33357534)
chr8 (658-695)||(4995048-4995085)
chr8 (655-695)||(13186451-13186491)
chr8 (659-695)||(16388918-16388954)
chr8 (655-695)||(36186456-36186496)
chr8 (659-695)||(39071676-39071712)
chr8 (658-694)||(40318357-40318393)
chr8 (648-695)||(12273245-12273292)
chr8 (657-695)||(12198948-12198986)
chr8 (657-695)||(12443376-12443414)
chr8 (658-692)||(13186059-13186093)
chr8 (657-695)||(23663543-23663581)
chr8 (657-695)||(23663906-23663944)
chr8 (661-695)||(40317966-40318000)
chr8 (655-692)||(4994653-4994690)
chr8 (658-695)||(8316652-8316689)
chr8 (658-695)||(8316980-8317017)
chr8 (658-695)||(20386822-20386859)
chr8 (656-689)||(34060486-34060519)
chr8 (662-695)||(38862955-38862988)
chr8 (654-687)||(39072041-39072074)
chr8 (658-694)||(9065763-9065799)
chr8 (659-695)||(20385568-20385604)
chr8 (655-695)||(23698636-23698676)
chr8 (659-695)||(38956064-38956100)
chr8 (656-695)||(1425050-1425089)
chr8 (660-695)||(4405700-4405735)
chr8 (659-694)||(4406053-4406088)
chr8 (659-690)||(42803615-42803646)
chr8 (659-693)||(23698308-23698342)
chr8 (654-692)||(34685652-34685690)
chr8 (659-689)||(38862618-38862648)
chr8 (659-692)||(5960046-5960079)
chr8 (654-695)||(31608905-31608946)
chr8 (659-691)||(30459371-30459403)
chr8 (658-690)||(34061725-34061757)
chr8 (657-689)||(34176443-34176475)
chr8 (655-695)||(35756580-35756619)
chr8 (658-690)||(36928873-36928905)
[»] chr5 (63 HSPs)
chr5 (654-695)||(6150812-6150853)
chr5 (655-695)||(14194419-14194459)
chr5 (656-695)||(5993886-5993925)
chr5 (657-695)||(20814527-20814565)
chr5 (657-695)||(20840531-20840569)
chr5 (658-695)||(6150453-6150490)
chr5 (658-695)||(16157247-16157284)
chr5 (654-695)||(17202791-17202832)
chr5 (658-695)||(18247468-18247505)
chr5 (654-695)||(19892303-19892344)
chr5 (657-694)||(27937053-27937090)
chr5 (658-695)||(39453691-39453728)
chr5 (659-695)||(5024019-5024055)
chr5 (655-695)||(32242238-32242278)
chr5 (658-694)||(32242634-32242670)
chr5 (660-695)||(18247087-18247122)
chr5 (660-695)||(38442459-38442494)
chr5 (660-694)||(19518000-19518034)
chr5 (657-695)||(20840829-20840867)
chr5 (657-695)||(28269420-28269458)
chr5 (657-695)||(28770867-28770905)
chr5 (661-695)||(35512506-35512540)
chr5 (657-695)||(38475391-38475429)
chr5 (661-695)||(39453302-39453336)
chr5 (658-695)||(3528872-3528909)
chr5 (662-695)||(5024410-5024443)
chr5 (642-691)||(5835822-5835871)
chr5 (662-695)||(11740690-11740723)
chr5 (658-695)||(11761748-11761785)
chr5 (658-695)||(11762109-11762146)
chr5 (658-695)||(18670201-18670238)
chr5 (654-695)||(20814131-20814172)
chr5 (658-695)||(24547517-24547554)
chr5 (654-695)||(27587143-27587184)
chr5 (654-695)||(35512143-35512184)
chr5 (658-695)||(42265734-42265771)
chr5 (662-695)||(43159206-43159239)
chr5 (659-695)||(186811-186847)
chr5 (659-695)||(3529234-3529270)
chr5 (655-695)||(13962860-13962900)
chr5 (659-695)||(27587507-27587543)
chr5 (649-689)||(42265890-42265930)
chr5 (664-695)||(8322796-8322827)
chr5 (660-695)||(11741909-11741944)
chr5 (657-692)||(13362248-13362283)
chr5 (658-689)||(16083341-16083372)
chr5 (660-695)||(16156856-16156891)
chr5 (656-695)||(24547174-24547213)
chr5 (661-695)||(19892700-19892734)
chr5 (657-695)||(28269772-28269809)
chr5 (657-695)||(29646360-29646398)
chr5 (661-695)||(37992680-37992714)
chr5 (658-691)||(11047437-11047470)
chr5 (662-695)||(11047828-11047861)
chr5 (662-695)||(13362620-13362653)
chr5 (661-694)||(16082979-16083012)
chr5 (658-695)||(17202398-17202435)
chr5 (662-695)||(21257553-21257586)
chr5 (658-695)||(21265534-21265571)
chr5 (662-695)||(27937391-27937424)
chr5 (659-695)||(28771230-28771266)
chr5 (659-695)||(35920576-35920612)
chr5 (647-695)||(37991187-37991235)
[»] chr3 (29 HSPs)
chr3 (655-695)||(40758502-40758542)
chr3 (657-695)||(40033848-40033886)
chr3 (658-695)||(33689381-33689418)
chr3 (659-695)||(9294350-9294386)
chr3 (655-695)||(23458371-23458411)
chr3 (655-695)||(33689771-33689811)
chr3 (659-695)||(40758147-40758183)
chr3 (657-695)||(2796177-2796215)
chr3 (657-695)||(42342789-42342827)
chr3 (658-695)||(19741284-19741321)
chr3 (662-695)||(36150530-36150563)
chr3 (654-695)||(41558003-41558044)
chr3 (659-695)||(3850519-3850555)
chr3 (658-690)||(26463983-26464015)
chr3 (659-695)||(34142610-34142646)
chr3 (660-692)||(35712045-35712077)
chr3 (659-695)||(36418080-36418116)
chr3 (660-692)||(41989581-41989613)
chr3 (661-692)||(9292245-9292276)
chr3 (661-691)||(43384679-43384709)
chr3 (658-691)||(2796493-2796526)
chr3 (662-695)||(26463635-26463668)
chr3 (661-694)||(36150605-36150638)
chr3 (662-695)||(46474818-46474851)
chr3 (662-695)||(46475172-46475205)
chr3 (662-695)||(53756747-53756780)
chr3 (640-692)||(23272805-23272857)
chr3 (663-695)||(41558274-41558306)
chr3 (660-692)||(51994281-51994313)
[»] chr4 (59 HSPs)
chr4 (657-695)||(51692911-51692949)
chr4 (654-695)||(15508064-15508105)
chr4 (658-695)||(46661306-46661343)
chr4 (654-695)||(50419029-50419070)
chr4 (655-695)||(7451830-7451870)
chr4 (655-695)||(13058033-13058073)
chr4 (659-695)||(18831709-18831745)
chr4 (647-695)||(24349662-24349710)
chr4 (655-695)||(24411740-24411780)
chr4 (655-695)||(24711472-24711512)
chr4 (658-694)||(35028391-35028427)
chr4 (656-695)||(35027995-35028034)
chr4 (656-695)||(39539310-39539349)
chr4 (657-695)||(148147-148185)
chr4 (657-695)||(10781876-10781914)
chr4 (657-695)||(34765772-34765810)
chr4 (657-695)||(50418666-50418704)
chr4 (657-695)||(51692551-51692589)
chr4 (654-695)||(7452195-7452236)
chr4 (658-695)||(10780712-10780749)
chr4 (658-695)||(10974321-10974358)
chr4 (658-691)||(14801735-14801768)
chr4 (658-691)||(17355924-17355957)
chr4 (658-695)||(23613308-23613345)
chr4 (658-695)||(24350824-24350861)
chr4 (658-695)||(24711110-24711147)
chr4 (658-695)||(48528484-48528521)
chr4 (658-695)||(53129898-53129935)
chr4 (662-695)||(54086698-54086731)
chr4 (658-691)||(54713615-54713648)
chr4 (659-695)||(23613670-23613706)
chr4 (657-689)||(52909651-52909683)
chr4 (660-695)||(15507674-15507709)
chr4 (656-695)||(35508632-35508671)
chr4 (656-695)||(37976545-37976584)
chr4 (660-695)||(49879208-49879243)
chr4 (660-695)||(52909254-52909289)
chr4 (87-177)||(2278152-2278242)
chr4 (658-692)||(5368946-5368980)
chr4 (662-692)||(11108235-11108265)
chr4 (657-695)||(34765378-34765416)
chr4 (661-695)||(44967071-44967105)
chr4 (657-695)||(44967430-44967468)
chr4 (661-695)||(53701814-53701848)
chr4 (657-695)||(55867506-55867544)
chr4 (658-695)||(1178056-1178093)
chr4 (658-695)||(1179192-1179229)
chr4 (658-695)||(13058374-13058411)
chr4 (658-695)||(18831348-18831385)
chr4 (661-694)||(24411360-24411393)
chr4 (655-692)||(36008840-36008877)
chr4 (656-693)||(36009208-36009245)
chr4 (662-695)||(37248597-37248630)
chr4 (662-695)||(37976156-37976189)
chr4 (654-691)||(54435493-54435530)
chr4 (654-695)||(55866106-55866147)
chr4 (659-695)||(147319-147355)
chr4 (658-690)||(53702195-53702227)
chr4 (655-695)||(54087087-54087127)
[»] scaffold0707 (1 HSPs)
scaffold0707 (658-695)||(6471-6508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (659-695)||(68965-69001)
scaffold0031 (659-690)||(69362-69393)
[»] scaffold0007 (2 HSPs)
scaffold0007 (657-695)||(1767-1805)
scaffold0007 (658-695)||(2133-2170)
[»] scaffold0075 (2 HSPs)
scaffold0075 (654-691)||(14424-14461)
scaffold0075 (659-695)||(14782-14818)
[»] scaffold0005 (1 HSPs)
scaffold0005 (658-691)||(37959-37992)
[»] scaffold0020 (2 HSPs)
scaffold0020 (655-695)||(139668-139708)
scaffold0020 (662-694)||(140034-140066)
[»] scaffold0775 (1 HSPs)
scaffold0775 (657-695)||(4960-4998)
[»] scaffold0295 (1 HSPs)
scaffold0295 (658-692)||(2524-2558)


Alignment Details
Target: chr2 (Bit Score: 579; Significance: 0; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 579; E-Value: 0
Query Start/End: Original strand, 9 - 695
Target Start/End: Complemental strand, 44714838 - 44714153
Alignment:
Q  9 aacccaggtgaggagtaccatatcgaagggtgtttctctcaacgtggttgcaaagtttttaacgcgatgaaggaaattgtggctgagatttatcgtaaag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44714838 aacccaggtgaggagtaccatatcgaagggtgtttctctcaacgtggttgcaaagtttttaacgcgatgaaggaaattgtggctgagatttatcgtaaag 44714739  T
Q  109 tggaccccactacaggtaatacgcttgggaaggaagtgttctctctttgtgttaagcctggttttgatgctgcttttgcaatgggatttattctcgtcct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44714738 tggaccccactacaggtaatacgcttgggaaggaagtgttctctctttgtgttaagcctggttttgatgctgcttttgcaatgggatttattctcgtcct 44714639  T
Q  209 tgatcatatcagcggtgatgattcccttgatgatgatgcaactgcggagtcttctgtgcatcctactacagaagattaataagataaatataccaaacaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  44714638 tgatcatatcagcggtgatgattcccttgatgatgatgcaactgcggagtcttctgtgcatcctaccacagaagattaataagataaataaaccaaacaa 44714539  T
Q  309 caatgcattgcattacgttaattatgctggggttttgtttagtttaacccactaatctttggagtgtcccttacaaagggagccactacgtaccccttct 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44714538 caatgcattgcattacgttaattatgctggggttttgtttagtttaacccactaatctttggagtgtcccttacaaagggagccactacgtaccccttct 44714439  T
Q  409 tttatgggtcatgccattgagnnnnnnngcgttttaaatttcctatgcgatcttgtaaattttattctattcatnnnnnnntacacatgtctaaagttga 508  Q
    |||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||    
T  44714438 tttatgggtcatgccattgagaaaaaaagcgttttaaatttcctatgccatcttgtaaattttattctattcataaaaaaatacacatgtctaaagttga 44714339  T
Q  509 ggttatctaaacttaaaaataaaattttaggctatctattttgcattatatgcaattatgcatcagttagcactcttatgaatggttgatctattctcta 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44714338 ggttatctaaacttaaaaataaaattttaggctatctattttgcattatatgcaattatgcatcagttagcactcttatgaatggttgatctattctcta 44714239  T
Q  609 tccatnnnnnnnnnnnnnntattatgagcacttttttattatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||              ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44714238 tccataaaaaaaataaaaatattatgagcacttttttattattttttttaggcttaaatatgt-tttcatccttgcaattaggggtc 44714153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 9 - 283
Target Start/End: Complemental strand, 44704135 - 44703861
Alignment:
Q  9 aacccaggtgaggagtaccatatcgaagggtgtttctctcaacgtggttgcaaagtttttaacgcgatgaaggaaattgtggctgagatttatcgtaaag 108  Q
    ||||| |||||||||||||| || ||||| || |||||||||||| ||||||  ||||||||||  ||||||||||  || ||||||||| |||| ||||    
T  44704135 aaccctggtgaggagtaccacattgaaggttgcttctctcaacgttgttgcacggtttttaacggaatgaaggaaaacgtagctgagattcatcgcaaag 44704036  T
Q  109 tggaccccactacaggtaatacgcttgggaaggaagtgttctctctttgtgttaagcctggttttgatgctgcttttgcaatgggatttattctcgtcct 208  Q
    |||||||||| ||||||  || |||||| || |||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||    
T  44704035 tggaccccaccacaggtgttatgcttggaaaagaagtgttatctctttgtgttaagcctggttttgacgctgcctttgctatgggattcgttctcgtcct 44703936  T
Q  209 tgatcatatcagcggtgatgattcccttgatgatgatgcaactgcggagtcttctgtgcatcctactacagaaga 283  Q
    |||||| |||| |||||||| |||  ||| ||||||||||||||||||| || | || || ||||||||||||||    
T  44703935 tgatcaaatcaacggtgatggttcaattggtgatgatgcaactgcggagcctacggtacaccctactacagaaga 44703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 39423945 - 39423907
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtc 39423907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 3555249 - 3555286
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtc 3555286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 36755517 - 36755480
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtc 36755480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 656 - 695
Target Start/End: Complemental strand, 15848519 - 15848480
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  15848519 ttaggcttaaataagtatttcatccttgcaattaggggtc 15848480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 649 - 692
Target Start/End: Complemental strand, 39498717 - 39498674
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  39498717 attttttttaggcttaaatatgtatttgatccttgcaattaggg 39498674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 11163453 - 11163415
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtc 11163415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 2318939 - 2318902
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtc 2318902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 6588686 - 6588719
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtc 6588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 15848087 - 15848124
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtc 15848124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 16099453 - 16099416
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtc 16099416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 34447812 - 34447849
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||| |||||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtc 34447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 657 - 694
Target Start/End: Complemental strand, 34448225 - 34448188
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34448225 taggcttaaacatgtatttcatccttgcaattaggggt 34448188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 36382556 - 36382519
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||| |||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtc 36382519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 37895346 - 37895383
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||| |||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtc 37895383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 44045435 - 44045394
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  44045435 ttttaggcttaaatatgtatttgatccctgcaattaggggtc 44045394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 692
Target Start/End: Original strand, 2318160 - 2318192
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||||||||||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattaggg 2318192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 10713151 - 10713115
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||| |||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtc 10713115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 656 - 692
Target Start/End: Original strand, 36382158 - 36382194
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36382158 ttaggcttaagtatgtatttcatccttgcaattaggg 36382194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 690
Target Start/End: Original strand, 30729621 - 30729652
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattag 690  Q
    ||||||||||||||||||||||||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattag 30729652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 6657876 - 6657914
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  6657876 taggcttaaatatgtatttgatccttgcaatttggggtc 6657914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 25231278 - 25231240
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  25231278 taggcttaaatatgtatttaatccctgcaattaggggtc 25231240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Complemental strand, 36480144 - 36480110
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||| |||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtc 36480110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 45556111 - 45556145
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||| ||||||||||||||||    
T  45556111 aggcttaaatatgtatttgatccttgcaattaggg 45556145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 6658280 - 6658239
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||| |||||||||||||| ||||    
T  6658280 tttttggcttaaatatgtatttgatccttgcaattagaggtc 6658239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 655 - 692
Target Start/End: Original strand, 10712719 - 10712756
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  10712719 tttagacttaagtatgtatttcatccttgcaattaggg 10712756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 37895772 - 37895739
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||| |||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtc 37895739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 45556476 - 45556439
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  45556476 aggcttaaatatgtatttgatccttgtaattaggggtc 45556439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 9076495 - 9076459
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| || ||||||||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtc 9076459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 16099055 - 16099091
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| || ||||||||||||||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtc 16099091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 25230102 - 25230138
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtc 25230138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 648 - 695
Target Start/End: Original strand, 36479706 - 36479754
Alignment:
Q  648 tatttcttttaggcttaaatatgtatttcatcc-ttgcaattaggggtc 695  Q
    ||||| ||| || |||||||||||||||||||| |||||||||||||||    
T  36479706 tatttttttaagacttaaatatgtatttcatcctttgcaattaggggtc 36479754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 694
Target Start/End: Original strand, 44044113 - 44044149
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||| |||| |||||||||||||    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggt 44044149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 648 - 695
Target Start/End: Complemental strand, 45011043 - 45010996
Alignment:
Q  648 tatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45011043 tattttttttaggcttaaatatgtatttcatccttgcaattaggggtc 45010996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 649 - 695
Target Start/End: Complemental strand, 27397033 - 27396987
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27397033 atttattttaggcttaaatatgtatttcatccttgcaattaggggtc 27396987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 5457339 - 5457299
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5457339 tttaggcttaaatatgtatttcatccttgcaattaggggtc 5457299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 28469438 - 28469400
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtc 28469400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 17102422 - 17102381
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  17102422 ttttaggcttaaatatgtatttgatccttgcaattaggggtc 17102381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 24389214 - 24389177
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtc 24389177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 28469009 - 28469046
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtc 28469046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 694
Target Start/End: Complemental strand, 10936223 - 10936187
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||||||||||||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggt 10936187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 48788799 - 48788839
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  48788799 tttaggcttaaatatgtatttcattcttgcaattaggggtc 48788839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 657 - 692
Target Start/End: Complemental strand, 17886920 - 17886885
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||||||||||||||||||||||||||||||||    
T  17886920 taggcttaaatatgtatttcatccttgcaattaggg 17886885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 656 - 695
Target Start/End: Original strand, 28105498 - 28105537
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  28105498 ttaggcttaaatatgtatttcatccttgcaattaagggtc 28105537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 649 - 695
Target Start/End: Original strand, 10935784 - 10935830
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||    
T  10935784 atttttttttggcttaaatgtgtatttcatccttgcaattaggggtc 10935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 649 - 695
Target Start/End: Original strand, 42019588 - 42019633
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  42019588 atttcttttag-cttaaatatgtatttcatccttgcaattaagggtc 42019633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 42731849 - 42731811
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtc 42731811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 2640177 - 2640214
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtc 2640214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 6253869 - 6253832
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtc 6253832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 6571012 - 6571049
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtc 6571049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 17102019 - 17102056
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtc 17102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 22871706 - 22871669
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtc 22871669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 27991738 - 27991775
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtc 27991775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 29141605 - 29141568
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtc 29141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 32298776 - 32298813
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtc 32298813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 692
Target Start/End: Complemental strand, 37657265 - 37657232
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||||||||||||||||||||||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattaggg 37657232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 18670291 - 18670255
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtc 18670255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 20426762 - 20426722
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  20426762 tttaggcttaaatatgtatttcatccctgcaattagaggtc 20426722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 691
Target Start/End: Complemental strand, 40380112 - 40380080
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||||||||||||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattagg 40380080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 662 - 694
Target Start/End: Complemental strand, 42020022 - 42019990
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggt 42019990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 691
Target Start/End: Original strand, 42362450 - 42362482
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||||||||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattagg 42362482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 42731419 - 42731455
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||| |||||||||||||||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtc 42731455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 6253472 - 6253507
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||| |||||||||||||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtc 6253507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Complemental strand, 23181421 - 23181386
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||| |||||||||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtc 23181386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 695
Target Start/End: Original strand, 24388816 - 24388855
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  24388816 ttagacttaaatatgtatttcatccttgcaattatgggtc 24388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 693
Target Start/End: Original strand, 27396628 - 27396663
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagggg 693  Q
    |||||||||||||||||||||||||| |||||||||    
T  27396628 aggcttaaatatgtatttcatccttgtaattagggg 27396663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 695
Target Start/End: Complemental strand, 29144413 - 29144374
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  29144413 ttaggcttaaatatgtatttcgtccctgcaattaggggtc 29144374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 691
Target Start/End: Complemental strand, 32299144 - 32299101
Alignment:
Q  648 tatttcttttaggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||    
T  32299144 tattttttttatgcttaaatatgtatttgatccttgcaattagg 32299101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 695
Target Start/End: Original strand, 40379774 - 40379805
Alignment:
Q  664 aaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtc 40379805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 13386180 - 13386139
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  13386180 tttttggcttaaatatgtatttaatacttgcaattaggggtc 13386139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 19204488 - 19204525
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtc 19204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 27992133 - 27992100
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||| |||||||||||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtc 27992100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 32053142 - 32053179
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  32053142 aggcttaaatatgtatttcatccttgtaattatgggtc 32053179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 691
Target Start/End: Original strand, 37656855 - 37656884
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||    
T  37656855 ttaaatatgtatttcatccttgcaattagg 37656884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 43123175 - 43123211
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtc 43123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 649 - 695
Target Start/End: Complemental strand, 8090365 - 8090319
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  8090365 atttcttttaggcttaaatatgtattacatccttgcaattaggggtc 8090319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 656 - 695
Target Start/End: Complemental strand, 33647382 - 33647343
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33647382 ttaggcttaaatatgtatttcatccttgcaattaggggtc 33647343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 30726189 - 30726151
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtc 30726151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 3059685 - 3059648
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtc 3059648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 12081069 - 12081032
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12081069 ttttaggcttaaatatgtatttcatccttgcaattagg 12081032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 21628142 - 21628105
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtc 21628105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 33517963 - 33517926
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtc 33517926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 695
Target Start/End: Original strand, 3059241 - 3059293
Alignment:
Q  643 tttattatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||| || |||| |||||||||||||||||||||||||||| |||||    
T  3059241 tttattatttattataggtttaaatatgtatttcatccttgcaattaagggtc 3059293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 681158 - 681120
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtc 681120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 30337447 - 30337485
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtc 30337485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 30804291 - 30804253
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  30804291 taggattaaatatgtatttcatccttgcaattaggggtc 30804253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 657 - 694
Target Start/End: Complemental strand, 12408601 - 12408564
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12408601 taggcttaaatatgtatttcatccttacaattaggggt 12408564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 17734195 - 17734232
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtc 17734232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 26463174 - 26463215
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  26463174 ttttaggcttaaatatgtatttgatccctgcaattaggggtc 26463215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 26464627 - 26464591
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| ||||||||||||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtc 26464591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 30337846 - 30337810
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtc 30337810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 690
Target Start/End: Original strand, 15115339 - 15115370
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattag 690  Q
    ||||||||||||||||||||||||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattag 15115370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Original strand, 11434804 - 11434838
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||| |||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtc 11434838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Original strand, 12080638 - 12080672
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||| |||||||||||||||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtc 12080672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 13379912 - 13379874
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  13379912 taggcttaaatatgtatttgatccctgcaattaggggtc 13379874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 679865 - 679902
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtc 679902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 691
Target Start/End: Original strand, 22617886 - 22617915
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattagg 22617915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 659 - 692
Target Start/End: Original strand, 30725760 - 30725793
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||||| |||||||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattaggg 30725793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 15116660 - 15116624
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtc 15116624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 649 - 695
Target Start/End: Complemental strand, 23209765 - 23209719
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  23209765 atttattttaggcttaaatatgtatttcatccttgcaattaggggtc 23209719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 30711760 - 30711719
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30711760 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 30711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 43759254 - 43759214
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43759254 tttaggcttaaatatgtatttcatccttgcaattaggggtc 43759214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 648 - 695
Target Start/End: Original strand, 13914057 - 13914104
Alignment:
Q  648 tatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  13914057 tattttttttaggcttaaatgtgtatttcatccttgcaattaggggtc 13914104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 655 - 694
Target Start/End: Complemental strand, 34464881 - 34464842
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34464881 tttaggcttaaatatgtatttcatccttgcaattaggggt 34464842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 648 - 695
Target Start/End: Original strand, 37578181 - 37578228
Alignment:
Q  648 tatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  37578181 tattttttttaggtttaaatatgtatttcatccttgcaattaggggtc 37578228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 19515817 - 19515855
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtc 19515855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 24009561 - 24009611
Alignment:
Q  645 tattatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  24009561 tattttttttttttggcttaaatatgtatttcatccttgcaattaggggtc 24009611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 36694280 - 36694318
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtc 36694318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 36710381 - 36710419
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtc 36710419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 7820953 - 7820990
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtc 7820990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 17661851 - 17661888
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtc 17661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 34464444 - 34464485
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  34464444 tttttggcttaaatatgtatttcatccttgcaattaggggtc 34464485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 35152338 - 35152379
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  35152338 ttttaggcttaaatatgtatttcatccttgcaattagaggtc 35152379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 35473626 - 35473667
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  35473626 ttttaggcttaaatatgtatttaatccttgcaattaggggtc 35473667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 40772888 - 40772851
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtc 40772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 6367562 - 6367598
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtc 6367598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 694
Target Start/End: Original strand, 19017628 - 19017664
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||||||||||||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggt 19017664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 659 - 694
Target Start/End: Original strand, 30711327 - 30711362
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    ||||||||||||||||||||||||||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggt 30711362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 660 - 695
Target Start/End: Complemental strand, 35152757 - 35152722
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtc 35152722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 5734008 - 5734046
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtc 5734046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 691
Target Start/End: Complemental strand, 36694678 - 36694644
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||||||||||||||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaattagg 36694644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 691
Target Start/End: Complemental strand, 36710779 - 36710745
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||||||||||||||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaattagg 36710745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 41098731 - 41098769
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtc 41098769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 42533022 - 42533060
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtc 42533060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 6367991 - 6367954
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||| |||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtc 6367954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 17662279 - 17662242
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtc 17662242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 17692610 - 17692577
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtc 17692577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 25647883 - 25647920
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtc 25647920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 31197060 - 31197101
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  31197060 tttttggcttaaatatgtatttcatccctgcaattaggggtc 31197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 37578621 - 37578584
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtc 37578584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 40435348 - 40435381
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtc 40435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 691
Target Start/End: Complemental strand, 48779548 - 48779515
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||||||    
T  48779548 aggcttaaatatgtatttcatccttgcaattagg 48779515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 6518224 - 6518188
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||| |||||||||||||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtc 6518188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 26024820 - 26024784
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtc 26024784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 34849011 - 34849047
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtc 34849047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 34850493 - 34850457
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtc 34850457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 40772507 - 40772543
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||| |||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtc 40772543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 46899061 - 46899097
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtc 46899097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 4960541 - 4960576
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||| |||||||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtc 4960576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 655 - 693
Target Start/End: Complemental strand, 183624 - 183586
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattagggg 693  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  183624 tttaggcttaaatatgtatttgatccttgtaattagggg 183586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 690
Target Start/End: Complemental strand, 13914494 - 13914464
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattag 690  Q
    |||||||||||||||||||||||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattag 13914464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 662 - 692
Target Start/End: Original strand, 23209365 - 23209395
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||||||||||||||||    
T  23209365 ttaaatatgtatttcatccttgcaattaggg 23209395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Original strand, 42248475 - 42248509
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||| ||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtc 42248509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 47999522 - 47999484
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtc 47999484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 691
Target Start/End: Complemental strand, 5735140 - 5735107
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||| ||||||||||    
T  5735140 aggcttaaatatgtatttcatccctgcaattagg 5735107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 656 - 689
Target Start/End: Complemental strand, 19018060 - 19018027
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaatta 689  Q
    |||||||||||||||||||| |||||||||||||    
T  19018060 ttaggcttaaatatgtattttatccttgcaatta 19018027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 26024422 - 26024459
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| || ||||||||||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtc 26024459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 40210373 - 40210406
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||| ||||    
T  40210373 ttaaatatgtatttcatccttgcaattagtggtc 40210406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 46900029 - 46899992
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtc 46899992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 659 - 692
Target Start/End: Original strand, 47999123 - 47999156
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||||||||||||| ||||||||||||||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattaggg 47999156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 666 - 695
Target Start/End: Complemental strand, 49723147 - 49723118
Alignment:
Q  666 atatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtc 49723118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 183221 - 183257
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtc 183257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 649 - 689
Target Start/End: Original strand, 2828183 - 2828223
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaatta 689  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  2828183 atttcttaaaggcttaaatatgcatttcatccttgcaatta 2828223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 32917688 - 32917652
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||| |||||||||| |||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtc 32917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 661 - 693
Target Start/End: Complemental strand, 40210796 - 40210764
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattagggg 693  Q
    ||||||||||||||||||| |||||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattagggg 40210764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 661 - 689
Target Start/End: Complemental strand, 40439615 - 40439587
Alignment:
Q  661 cttaaatatgtatttcatccttgcaatta 689  Q
    |||||||||||||||||||||||||||||    
T  40439615 cttaaatatgtatttcatccttgcaatta 40439587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 16388578 - 16388619
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16388578 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 16388619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 33357493 - 33357534
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33357493 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 33357534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 4995085 - 4995048
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtc 4995048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 13186491 - 13186451
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  13186491 tttaggcttaaatatatatttcatccttgcaattaggggtc 13186451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 16388954 - 16388918
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtc 16388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 36186496 - 36186456
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  36186496 tttaggcttaaatatgtatttcatccttgcaattaagggtc 36186456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 39071676 - 39071712
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtc 39071712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 694
Target Start/End: Complemental strand, 40318393 - 40318357
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||||||||||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggt 40318357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 648 - 695
Target Start/End: Complemental strand, 12273292 - 12273245
Alignment:
Q  648 tatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  12273292 tattttttttaggtttaaatatgtatttgatccttgcaattaggggtc 12273245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 12198948 - 12198986
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  12198948 taggcttaaatatgtatttgatccttgcaattaggggtc 12198986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 12443376 - 12443414
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  12443376 taggcttaaatatgtatttgatccttgcaattaggggtc 12443414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 13186059 - 13186093
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||||||||||||||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattaggg 13186093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 23663543 - 23663581
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  23663543 taggcttaaatatgcatttcatccttgcaattaggggtc 23663581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 23663944 - 23663906
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtc 23663906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 695
Target Start/End: Original strand, 40317966 - 40318000
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtc 40318000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 655 - 692
Target Start/End: Original strand, 4994653 - 4994690
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  4994653 tttaggcttaaatatgtatttcatcgttgcaattaggg 4994690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 8316652 - 8316689
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtc 8316689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 8317017 - 8316980
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtc 8316980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 20386859 - 20386822
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtc 20386822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 656 - 689
Target Start/End: Original strand, 34060486 - 34060519
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaatta 689  Q
    ||||||||||||||||||||||||||||||||||    
T  34060486 ttaggcttaaatatgtatttcatccttgcaatta 34060519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 38862988 - 38862955
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtc 38862955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 687
Target Start/End: Complemental strand, 39072074 - 39072041
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaat 687  Q
    ||||||||||||||||||||||||||||||||||    
T  39072074 ttttaggcttaaatatgtatttcatccttgcaat 39072041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 658 - 694
Target Start/End: Complemental strand, 9065799 - 9065763
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9065799 aggcttaaatatgtattccatccttgcaattaggggt 9065763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 20385568 - 20385604
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtc 20385604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 23698676 - 23698636
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  23698676 tttaggcttaaatatgtatttgatccttgtaattaggggtc 23698636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 38956100 - 38956064
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtc 38956064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 695
Target Start/End: Original strand, 1425050 - 1425089
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  1425050 ttaggtttaaatatgtatttgatccttgcaattaggggtc 1425089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 4405700 - 4405735
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4405700 gcttaaatatgtatttcattcttgcaattaggggtc 4405735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 694
Target Start/End: Complemental strand, 4406088 - 4406053
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggt 4406053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 690
Target Start/End: Complemental strand, 42803646 - 42803615
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattag 690  Q
    ||||||||||||||||||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattag 42803615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 693
Target Start/End: Original strand, 23698308 - 23698342
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattagggg 693  Q
    ||||||||||||||||| |||||||||||||||||    
T  23698308 ggcttaaatatgtatttgatccttgcaattagggg 23698342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 654 - 692
Target Start/End: Complemental strand, 34685690 - 34685652
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  34685690 tttttggcttaaatatgtattttatccttgcaattaggg 34685652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 689
Target Start/End: Original strand, 38862618 - 38862648
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaatta 689  Q
    |||||||||||||||||||||||||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaatta 38862648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 659 - 692
Target Start/End: Original strand, 5960046 - 5960079
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||| |||||||||||||||||||||||||    
T  5960046 ggcttaaacatgtatttcatccttgcaattaggg 5960079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 31608946 - 31608905
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| |||||||||| |||||||||||||||||||| |||||    
T  31608946 tttttggcttaaataagtatttcatccttgcaattaagggtc 31608905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 691
Target Start/End: Original strand, 30459371 - 30459403
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||||||| ||||||||    
T  30459371 ggcttaaatatgtatttcatccttacaattagg 30459403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 690
Target Start/End: Complemental strand, 34061757 - 34061725
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattag 690  Q
    ||||||||||||||||| |||||||||||||||    
T  34061757 aggcttaaatatgtattgcatccttgcaattag 34061725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 657 - 689
Target Start/End: Original strand, 34176443 - 34176475
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaatta 689  Q
    |||| ||||||||||||||||||||||||||||    
T  34176443 taggtttaaatatgtatttcatccttgcaatta 34176475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 35756580 - 35756619
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  35756580 tttaggcttaaatatgtatttcat-catgcaattaggggtc 35756619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 690
Target Start/End: Complemental strand, 36928905 - 36928873
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattag 690  Q
    |||||||||||||||||||||| ||||||||||    
T  36928905 aggcttaaatatgtatttcatcgttgcaattag 36928873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 6150853 - 6150812
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6150853 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 6150812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 14194419 - 14194459
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14194419 tttaggcttaaatatgtatttcatccttgcaattaggggtc 14194459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 656 - 695
Target Start/End: Original strand, 5993886 - 5993925
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5993886 ttaggcttaaatatgtatttcatccttgcaattaggggtc 5993925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 20814565 - 20814527
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtc 20814527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 20840531 - 20840569
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtc 20840569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 6150453 - 6150490
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtc 6150490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 16157284 - 16157247
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtc 16157247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 17202832 - 17202791
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  17202832 tttttggcttaaatatgtatttcatccttgcaattaggggtc 17202791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 18247505 - 18247468
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtc 18247468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 19892303 - 19892344
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  19892303 ttttagacttaaatatgtatttcatccttgcaattaggggtc 19892344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 657 - 694
Target Start/End: Original strand, 27937053 - 27937090
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27937053 taggcttaaatatgtatttcatccttgcaattaggggt 27937090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 39453728 - 39453691
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtc 39453691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 5024019 - 5024055
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtc 5024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 32242238 - 32242278
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  32242238 tttagggttaaatatgtatttcatccttgcaattaggggtc 32242278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 694
Target Start/End: Complemental strand, 32242670 - 32242634
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||||||||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggt 32242634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 18247087 - 18247122
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtc 18247122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 660 - 695
Target Start/End: Complemental strand, 38442494 - 38442459
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtc 38442459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 694
Target Start/End: Complemental strand, 19518034 - 19518000
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||||||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggt 19518000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 20840867 - 20840829
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtc 20840829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 28269420 - 28269458
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28269420 taggcttaaatatgtatttcatcattgcaattaggggtc 28269458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 28770867 - 28770905
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtc 28770905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 695
Target Start/End: Complemental strand, 35512540 - 35512506
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtc 35512506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 38475429 - 38475391
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  38475429 taggcttaaatatgcatttcatccttgcaattaggggtc 38475391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 695
Target Start/End: Original strand, 39453302 - 39453336
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtc 39453336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 3528872 - 3528909
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtc 3528909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 5024443 - 5024410
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtc 5024410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 5835871 - 5835822
Alignment:
Q  642 ttttattatttcttttaggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||| ||||| |||| || ||||||||||||||||||||||||||||||    
T  5835871 ttttactatttatttttggtttaaatatgtatttcatccttgcaattagg 5835822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 11740690 - 11740723
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtc 11740723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 11761748 - 11761785
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtc 11761785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 11762146 - 11762109
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtc 11762109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 18670201 - 18670238
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtc 18670238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 20814131 - 20814172
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||| ||||||| ||||    
T  20814131 ttttaggcttaaatatgtatttcatccttacaattagaggtc 20814172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 24547554 - 24547517
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtc 24547517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 27587143 - 27587184
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  27587143 tttttggcttaaatatgtatttgatccttgcaattaggggtc 27587184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 35512143 - 35512184
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  35512143 ttttaggtttaaatatgtatttcatccttgcaattaagggtc 35512184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 42265734 - 42265771
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtc 42265771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 43159239 - 43159206
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtc 43159206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 186847 - 186811
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||| ||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtc 186811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 3529270 - 3529234
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtc 3529234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 13962860 - 13962900
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  13962860 tttaggcttaaatatatattttatccttgcaattaggggtc 13962900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 27587543 - 27587507
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtc 27587507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 649 - 689
Target Start/End: Complemental strand, 42265930 - 42265890
Alignment:
Q  649 atttcttttaggcttaaatatgtatttcatccttgcaatta 689  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  42265930 atttgtttaaggcttaaatatgtatttcatccttgcaatta 42265890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 695
Target Start/End: Complemental strand, 8322827 - 8322796
Alignment:
Q  664 aaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtc 8322796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Complemental strand, 11741944 - 11741909
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||| |||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtc 11741909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Original strand, 13362248 - 13362283
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||| |||||||||||||||||||||||||||||||    
T  13362248 taggtttaaatatgtatttcatccttgcaattaggg 13362283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 689
Target Start/End: Complemental strand, 16083372 - 16083341
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaatta 689  Q
    ||||||||||||||||||||||||||||||||    
T  16083372 aggcttaaatatgtatttcatccttgcaatta 16083341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 16156856 - 16156891
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtc 16156891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 695
Target Start/End: Original strand, 24547174 - 24547213
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  24547174 ttaggcttaaatatgtacttgatccttgcaattaggggtc 24547213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Complemental strand, 19892734 - 19892700
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||| ||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtc 19892700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 28269809 - 28269772
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  28269809 taggcttaaatatgtatttcat-cttgcaattaggggtc 28269772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 29646360 - 29646398
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  29646360 taggcttaaatatgtattttatccttgtaattaggggtc 29646398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Complemental strand, 37992714 - 37992680
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||| ||||||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtc 37992680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 691
Target Start/End: Original strand, 11047437 - 11047470
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||| |||||||||||||    
T  11047437 aggcttaaatatgtatttcacccttgcaattagg 11047470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 11047861 - 11047828
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||| ||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtc 11047828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 13362653 - 13362620
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtc 13362620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 661 - 694
Target Start/End: Original strand, 16082979 - 16083012
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||| |||||||||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggt 16083012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 17202398 - 17202435
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtc 17202435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 21257586 - 21257553
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| ||||||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtc 21257553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 21265571 - 21265534
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtc 21265534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 27937424 - 27937391
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||| |||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtc 27937391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 28771266 - 28771230
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtc 28771230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 35920612 - 35920576
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||| | |||||||||||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtc 35920576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 647 - 695
Target Start/End: Original strand, 37991187 - 37991235
Alignment:
Q  647 ttatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||  ||||||||||||||| | ||||||| ||||||||||||||    
T  37991187 ttatttcaattaggcttaaatatgaaattcatccctgcaattaggggtc 37991235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 40758542 - 40758502
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40758542 tttaggcttaaatatgtatttcatccttgcaattaggggtc 40758502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 40033886 - 40033848
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtc 40033848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 33689381 - 33689418
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtc 33689418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 9294386 - 9294350
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtc 9294350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 23458411 - 23458371
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  23458411 tttaggcttaaatatgtatttcatccttgcaattatgggtc 23458371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 33689811 - 33689771
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  33689811 tttaggcttaaatatgtatttcatctttgcaattaggggtc 33689771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 40758147 - 40758183
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtc 40758183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 2796177 - 2796215
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtc 2796215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 42342789 - 42342827
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtc 42342827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 19741321 - 19741284
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtc 19741284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 36150530 - 36150563
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtc 36150563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 41558003 - 41558044
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  41558003 ttttaggcttaaatatgtatttcattcttgcaattatgggtc 41558044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 3850555 - 3850519
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| ||||||||||||||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtc 3850519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 658 - 690
Target Start/End: Complemental strand, 26464015 - 26463983
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattag 690  Q
    |||||||||||||||||||||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattag 26463983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 34142646 - 34142610
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtc 34142610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 692
Target Start/End: Original strand, 35712045 - 35712077
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||||||||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattaggg 35712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 36418116 - 36418080
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtc 36418080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 692
Target Start/End: Complemental strand, 41989613 - 41989581
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||||||||||||||||||    
T  41989613 gcttaaatatgtatttcatccttgcaattaggg 41989581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 692
Target Start/End: Original strand, 9292245 - 9292276
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||||||||||||||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattaggg 9292276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 691
Target Start/End: Complemental strand, 43384709 - 43384679
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||||||||||||||    
T  43384709 cttaaatatgtatttcatccttgcaattagg 43384679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 691
Target Start/End: Complemental strand, 2796526 - 2796493
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||| ||||||||||||||||||    
T  2796526 aggcttaaatatgtacttcatccttgcaattagg 2796493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 26463635 - 26463668
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||| |||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtc 26463668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 661 - 694
Target Start/End: Complemental strand, 36150638 - 36150605
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||| |||||||||||||||    
T  36150638 cttaaatatgtatttcattcttgcaattaggggt 36150605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 46474818 - 46474851
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtc 46474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 46475205 - 46475172
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||| ||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtc 46475172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 53756747 - 53756780
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtc 53756780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 640 - 692
Target Start/End: Original strand, 23272805 - 23272857
Alignment:
Q  640 ttttttattatttcttttaggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||| | ||| |||||||||| ||||||| |||||||| |||||||||||    
T  23272805 ttttttaattttttttttaggctttaatatgtctttcatccctgcaattaggg 23272857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 663 - 695
Target Start/End: Complemental strand, 41558306 - 41558274
Alignment:
Q  663 taaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| ||||||||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtc 41558274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 692
Target Start/End: Complemental strand, 51994313 - 51994281
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||| ||||||||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattaggg 51994281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 51692949 - 51692911
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtc 51692911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 15508105 - 15508064
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  15508105 ttttagacttaaatatgtatttcatccttgcaattaggggtc 15508064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 46661343 - 46661306
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtc 46661306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 50419070 - 50419029
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  50419070 ttttaggcttaaatatgtatttgatccttgcaattaggggtc 50419029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 7451830 - 7451870
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7451830 tttaggcttaaatatgtatttgatccttgcaattaggggtc 7451870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 13058033 - 13058073
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  13058033 tttaggcttaaatatgtatttgatccttgcaattaggggtc 13058073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 18831745 - 18831709
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtc 18831709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 695
Target Start/End: Original strand, 24349662 - 24349710
Alignment:
Q  647 ttatttcttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||    
T  24349662 ttatttattctaggcttaaatatgtatttgatccttgcaattaggggtc 24349710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 24411780 - 24411740
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  24411780 tttaggcttaaatatgtatttcatccttgcaattaagggtc 24411740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 24711512 - 24711472
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  24711512 tttaggcttaaatatgtatttgatccttgcaattaggggtc 24711472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 694
Target Start/End: Complemental strand, 35028427 - 35028391
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||||||||||||||||||||||||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggt 35028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 656 - 695
Target Start/End: Original strand, 35027995 - 35028034
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  35027995 ttaggtttaaatatgtatttcatccttgcaattaggggtc 35028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 656 - 695
Target Start/End: Complemental strand, 39539349 - 39539310
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  39539349 ttaggcttaaatatgtatttcatccttgcaattaagggtc 39539310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 148185 - 148147
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtc 148147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 10781914 - 10781876
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtc 10781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 34765810 - 34765772
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  34765810 taggcttaaatatgtattttatccttgcaattaggggtc 34765772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 50418666 - 50418704
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtc 50418704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 51692551 - 51692589
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  51692551 taggcttaaatatgtatttcatccttgcaattagaggtc 51692589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 7452236 - 7452195
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  7452236 tttttggcttaaatatgtatttgatccttgcaattaggggtc 7452195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 10780712 - 10780749
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtc 10780749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 10974321 - 10974358
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtc 10974358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 691
Target Start/End: Original strand, 14801735 - 14801768
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattagg 14801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 691
Target Start/End: Original strand, 17355924 - 17355957
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||||||    
T  17355924 aggcttaaatatgtatttcatccttgcaattagg 17355957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 23613308 - 23613345
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtc 23613345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 24350861 - 24350824
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtc 24350824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 24711110 - 24711147
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtc 24711147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 48528484 - 48528521
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtc 48528521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 53129935 - 53129898
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||| |||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtc 53129898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 54086698 - 54086731
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtc 54086731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 691
Target Start/End: Original strand, 54713615 - 54713648
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||||||    
T  54713615 aggcttaaatatgtatttcatccttgcaattagg 54713648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 23613706 - 23613670
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||| |||||||||||||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtc 23613670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 657 - 689
Target Start/End: Complemental strand, 52909683 - 52909651
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaatta 689  Q
    |||||||||||||||||||||||||||||||||    
T  52909683 taggcttaaatatgtatttcatccttgcaatta 52909651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 15507674 - 15507709
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||| |||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtc 15507709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 695
Target Start/End: Complemental strand, 35508671 - 35508632
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  35508671 ttaggcttaaatatgtattttatcattgcaattaggggtc 35508632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 695
Target Start/End: Complemental strand, 37976584 - 37976545
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  37976584 ttaggcttaaatatgtatttcatcatggcaattaggggtc 37976545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 49879208 - 49879243
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||| |||||||||||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtc 49879243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 695
Target Start/End: Original strand, 52909254 - 52909289
Alignment:
Q  660 gcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||| |||||||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtc 52909289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 2278152 - 2278242
Alignment:
Q  87 gtggctgagatttatcgtaaagtggaccccactacaggtaatacgcttgggaaggaagtgttctctctttgtgttaagcctggttttgatg 177  Q
    ||||||||||||  |||||||||||||||||| ||  ||  || ||||||||| |||||||||   ||||||||| | |||| ||||||||    
T  2278152 gtggctgagattcgtcgtaaagtggaccccaccactagtgttatgcttgggaaagaagtgttcatgctttgtgttcaacctgattttgatg 2278242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 5368946 - 5368980
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||| ||||||||||||||||    
T  5368946 aggcttaaatatgtatttgatccttgcaattaggg 5368980  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 662 - 692
Target Start/End: Complemental strand, 11108265 - 11108235
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggg 692  Q
    |||||||||||||||||||||||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattaggg 11108235  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 34765378 - 34765416
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtc 34765416  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Original strand, 44967071 - 44967105
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||| |||||||||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtc 44967105  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 44967468 - 44967430
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  44967468 taggcttaaatatgtatttgatccttgcaattagaggtc 44967430  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 661 - 695
Target Start/End: Original strand, 53701814 - 53701848
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||| |||||||||||||||||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtc 53701848  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 55867544 - 55867506
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  55867544 taggcttaaatatgtatttgatccctgcaattaggggtc 55867506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 1178056 - 1178093
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtc 1178093  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 1179229 - 1179192
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtc 1179192  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 13058411 - 13058374
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtc 13058374  T

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Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 695
Target Start/End: Original strand, 18831348 - 18831385
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtc 18831385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 661 - 694
Target Start/End: Original strand, 24411360 - 24411393
Alignment:
Q  661 cttaaatatgtatttcatccttgcaattaggggt 694  Q
    ||||||||||||||||||||| ||||||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggt 24411393  T

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Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 655 - 692
Target Start/End: Original strand, 36008840 - 36008877
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  36008840 tttaggcttaaatatgtatttgatccttgtaattaggg 36008877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 656 - 693
Target Start/End: Complemental strand, 36009245 - 36009208
Alignment:
Q  656 ttaggcttaaatatgtatttcatccttgcaattagggg 693  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  36009245 ttaggcttaaatatgtatttgatccttgtaattagggg 36009208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Complemental strand, 37248630 - 37248597
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||| |||||||||||||||||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtc 37248597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 662 - 695
Target Start/End: Original strand, 37976156 - 37976189
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||| ||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtc 37976189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 54435530 - 54435493
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  54435530 ttttaggcttaaatatgtatttcgtgcttgcaattagg 54435493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 55866106 - 55866147
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||| |||||||||||||||||| ||| ||||||||||||||    
T  55866106 tttttggcttaaatatgtatttcgtccctgcaattaggggtc 55866147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 147319 - 147355
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||| | ||||||||||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtc 147355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 690
Target Start/End: Complemental strand, 53702227 - 53702195
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattag 690  Q
    |||||||||||||||||||||| ||||||||||    
T  53702227 aggcttaaatatgtatttcatctttgcaattag 53702195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 655 - 695
Target Start/End: Complemental strand, 54087127 - 54087087
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  54087127 tttagacttaaatatgtatttcatcattgtaattaggggtc 54087087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 6508 - 6471
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtc 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 695
Target Start/End: Original strand, 68965 - 69001
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||||||||||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtc 69001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 690
Target Start/End: Complemental strand, 69393 - 69362
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattag 690  Q
    ||||||||||||||||||||||||||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaattag 69362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 1767 - 1805
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtc 1805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 695
Target Start/End: Complemental strand, 2170 - 2133
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||| |||||||||||||||||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtc 2133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 14424 - 14461
Alignment:
Q  654 ttttaggcttaaatatgtatttcatccttgcaattagg 691  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14424 ttttaggcttaaatatgtatttcatcattgcaattagg 14461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 695
Target Start/End: Complemental strand, 14818 - 14782
Alignment:
Q  659 ggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||| ||||||||||||||||||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtc 14782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 691
Target Start/End: Complemental strand, 37992 - 37959
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattagg 691  Q
    ||||||||||||||||||||||||||||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattagg 37959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 695
Target Start/End: Original strand, 139668 - 139708
Alignment:
Q  655 tttaggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  139668 tttaggattaaatatgtatttgatccttgcaattaggggtc 139708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 662 - 694
Target Start/End: Complemental strand, 140066 - 140034
Alignment:
Q  662 ttaaatatgtatttcatccttgcaattaggggt 694  Q
    |||||||||||||| ||||||||||||||||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggt 140034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 4960 - 4998
Alignment:
Q  657 taggcttaaatatgtatttcatccttgcaattaggggtc 695  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  4960 taggcttaaatatgtatttcatccctacaattaggggtc 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 2558 - 2524
Alignment:
Q  658 aggcttaaatatgtatttcatccttgcaattaggg 692  Q
    ||||||||||||||||||||| |||||||||||||    
T  2558 aggcttaaatatgtatttcattcttgcaattaggg 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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