View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5931-Insertion-4 (Length: 465)
Name: NF5931-Insertion-4
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5931-Insertion-4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 8 - 465
Target Start/End: Original strand, 35308692 - 35309149
Alignment:
| Q |
8 |
atggataacacatgtgaggagtcatagtcaaaggtcaactagatcctgtcaatattaaccatcaaaacacacatatagtcagaccatctacctgtaatac |
107 |
Q |
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| T |
35308692 |
atggataacacatgtgaggagtcatagtcaaaggtcaactagatcctgtcaatattaaccatcaaaacacacatatagtcagaccatctacctgtaatac |
35308791 |
T |
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| Q |
108 |
caattccctttgtcccttaacttagaggagaaagtactagaatgaaaatccattattttgcgatatgactaatatacctcaattgcatgaagttggtcac |
207 |
Q |
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| T |
35308792 |
caattccctttgtcccttaacttagaggagaaagtactagaatgaaaatccattattttgcgatatgactaatatacctcaattgcatgaagttggtcac |
35308891 |
T |
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| Q |
208 |
acaaaaatagtgatattgaatttcagtctactagattaggcaacttagccagcttatagaaaatggaaaattaaattggacagcaaacggcgcaacaaga |
307 |
Q |
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| T |
35308892 |
acaaaaatagtgatattgaatttcagtctactagattaggcaacttagccagcttatagaaaatggaaaattaaattggacagcaaacggcgcaacaaga |
35308991 |
T |
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| Q |
308 |
cagacaagtgccacaaacttccatcatattcatgggaaaaatcaaatcctcaattcatcattcaaaagacaatgatagctcactgtattcatgctacctt |
407 |
Q |
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| T |
35308992 |
cagacaagtgccacaaacttccatcatattcatgggaaaaatcaaatcctcaattcatcattcaaaagacaatgatagctcactgtattcatgctacctt |
35309091 |
T |
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| Q |
408 |
gacctctacagtgtaacaacagaaattgctatacctagctacaatattaattagttac |
465 |
Q |
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| T |
35309092 |
gacctctacagtgtaacaacagaaattgctatacctagctacaatattaattagttac |
35309149 |
T |
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