View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5931-Insertion-9 (Length: 375)
Name: NF5931-Insertion-9
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5931-Insertion-9 |
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Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 9 - 290
Target Start/End: Complemental strand, 22042849 - 22042567
Alignment:
| Q |
9 |
caacttttattccatctcacatatgcaacttgggttttctctccatatat--ctttctatataaaccatatattgacataattgaatgttcacaataaaa |
106 |
Q |
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| T |
22042849 |
caacttttattccatctcacatatgcaacttggcttttctctccatatatatctttatatataacccatctcttgacattattgcatcttcacaataaaa |
22042750 |
T |
|
| Q |
107 |
aatataactacatcatctttcacaactctttccacttcaaatggctggatatcgtgttgtacttaaaagacaagttttgggaggttttgaaactgtacat |
206 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |
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| T |
22042749 |
aatataactacatcatctttaacaactctttccacttcaaatggctggatatcgtgttgtacttaaaagacaaattctaggaggttttgaaactgtacat |
22042650 |
T |
|
| Q |
207 |
cttccatatcaggtattctatattttcagctttcctaactgctgattttaat-ttgttatactactctgcactgttgttaaactt |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| | | | ||||||||||||||||||||||||||| |||| |
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| T |
22042649 |
cttccatatcaggtattctatattttcagctttcctaactgct--ctgcactgttgttatactactctgcactgttgttatactt |
22042567 |
T |
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