View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5931_high_66 (Length: 273)
Name: NF5931_high_66
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5931_high_66 |
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Alignment Details
Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 44424437 - 44424180
Alignment:
| Q |
1 |
aataataatatgaagttaaaaaatctacacaccaccacaaggcaaacaacaccactttgcaagttggtcaaaaaaccaattaagaggacttaagtggtcc |
100 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44424437 |
aataataatatgaatttaaaaaatctacacaccaccacaaggcaaacaacaccactttgcaagttggtcaaaaaaccaattaagaggacttaagtggtcc |
44424338 |
T |
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| Q |
101 |
tcgtcttccacatgagatggagttggcagcggtagctcatcgggcaggtggcgatgaaacgcgtcaactgctgcagcaacgccatcttcactctcaatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44424337 |
tcgtcttccacatgagatggagttggcagcggtagctcatcgggcaggtggcgatgaaacgcgtcaactgctgcagcaacgccatcttcactctcaatca |
44424238 |
T |
|
| Q |
201 |
acttagcaacttccattgtccgagatttcacctgaaatacactaagagtgaatattat |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44424237 |
acttagcaacttccattgtccgagatttcacctgaaatacactaagagtgaatattat |
44424180 |
T |
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