View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5931_high_97 (Length: 203)
Name: NF5931_high_97
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5931_high_97 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 2664921 - 2664747
Alignment:
| Q |
12 |
attattcttaactacggaggaagtgttctatgggcctcaaattcatctggaccggcaaaaaatccggtagcacagcttctagacactggaaactttgtct |
111 |
Q |
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| T |
2664921 |
attattcttaactacggaggaagtgttctatgggcctcaaattcatctggaccggcaaaaactccggtagcacagcttctagacactggaaactttgtct |
2664822 |
T |
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| Q |
112 |
tgaagaactttgaagatgaaaactctgaagaaattttgtggcaaagtttcgattatccttctaatacattgttac |
186 |
Q |
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| T |
2664821 |
tgaagaactttgaagatgaaaactcagaagaaattttgtggcaaagtttcgattatccttctaatacattgttac |
2664747 |
T |
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