View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5931_low_22 (Length: 470)
Name: NF5931_low_22
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5931_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 1 - 450
Target Start/End: Complemental strand, 35309141 - 35308692
Alignment:
| Q |
1 |
ttaatattgtagctaggtatagcaatttctgttgttacactgtagaggtcaaggtagcatgaatacagtgagctatcattgtcttttgaatgatgaattg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35309141 |
ttaatattgtagctaggtatagcaatttctgttgttacactgtagaggtcaaggtagcatgaatacagtgagctatcattgtcttttgaatgatgaattg |
35309042 |
T |
|
| Q |
101 |
aggatttgatttttcccatgaatatgatggaagtttgtggcacttgtctgtcttgttgcgccgtttgctgtccaatttaattttccattttctataagct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35309041 |
aggatttgatttttcccatgaatatgatggaagtttgtggcacttgtctgtcttgttgcgccgtttgctgtccaatttaattttccattttctataagct |
35308942 |
T |
|
| Q |
201 |
ggctaagttgcctaatctagtagactgaaattcaatatcactatttttgtgtgaccaacttcatgcaattgaggtatattagtcatatcgcaaaataatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35308941 |
ggctaagttgcctaatctagtagactgaaattcaatatcactatttttgtgtgaccaacttcatgcaattgaggtatattagtcatatcgcaaaataatg |
35308842 |
T |
|
| Q |
301 |
gattttcattctagtactttctcctctaagttaagggacaaagggaattggtattacaggtagatggtctgactatatgtgtgttttgatggttaatatt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35308841 |
gattttcattctagtactttctcctctaagttaagggacaaagggaattggtattacaggtagatggtctgactatatgtgtgttttgatggttaatatt |
35308742 |
T |
|
| Q |
401 |
gacaggatctagttgacctttgactatgactcctcacatgtgttatccat |
450 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35308741 |
gacaggatctagttgacctttgactatgactcctcacatgtgttatccat |
35308692 |
T |
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