View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5931_low_28 (Length: 417)

Name: NF5931_low_28
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5931_low_28
NF5931_low_28
[»] chr3 (43 HSPs)
chr3 (3-394)||(55291605-55291996)
chr3 (22-399)||(46722609-46722986)
chr3 (78-398)||(10554960-10555280)
chr3 (1-226)||(12305888-12306113)
chr3 (1-226)||(3803639-3803864)
chr3 (123-392)||(43929050-43929319)
chr3 (4-226)||(29544038-29544260)
chr3 (120-327)||(43549776-43549983)
chr3 (4-226)||(54521588-54521810)
chr3 (110-394)||(10833416-10833694)
chr3 (156-394)||(6805085-6805316)
chr3 (110-226)||(42353-42469)
chr3 (3-141)||(15238972-15239108)
chr3 (110-226)||(16324651-16324767)
chr3 (123-210)||(6820011-6820098)
chr3 (110-228)||(5224146-5224264)
chr3 (144-226)||(18890249-18890331)
chr3 (123-208)||(16643926-16644011)
chr3 (110-218)||(13437072-13437180)
chr3 (110-228)||(15465918-15466036)
chr3 (110-228)||(26054545-26054663)
chr3 (123-208)||(50243656-50243741)
chr3 (110-226)||(18893508-18893623)
chr3 (124-208)||(24152509-24152593)
chr3 (3-153)||(11325049-11325199)
chr3 (1-124)||(12854990-12855112)
chr3 (152-228)||(22652595-22652671)
chr3 (152-228)||(16979734-16979810)
chr3 (2-153)||(13837039-13837190)
chr3 (178-226)||(14641729-14641777)
chr3 (152-210)||(13522502-13522560)
chr3 (152-210)||(48631172-48631230)
chr3 (152-236)||(45803491-45803575)
chr3 (347-394)||(43549985-43550032)
chr3 (345-395)||(36528021-36528071)
chr3 (2-62)||(11913786-11913847)
chr3 (77-141)||(15233104-15233166)
chr3 (157-229)||(50350976-50351048)
chr3 (345-398)||(3264808-3264861)
chr3 (2-62)||(51602525-51602586)
chr3 (1-29)||(9534355-9534383)
chr3 (1-29)||(17240512-17240540)
chr3 (1-29)||(18929273-18929301)
[»] chr7 (57 HSPs)
chr7 (22-398)||(14105450-14105826)
chr7 (22-394)||(14415467-14415839)
chr7 (78-398)||(17505043-17505363)
chr7 (78-398)||(17547851-17548171)
chr7 (110-394)||(13647939-13648223)
chr7 (4-226)||(23664127-23664349)
chr7 (1-226)||(11304013-11304238)
chr7 (127-390)||(4325757-4326020)
chr7 (4-226)||(29797376-29797599)
chr7 (4-226)||(29801195-29801418)
chr7 (123-394)||(39431311-39431583)
chr7 (154-394)||(19194848-19195088)
chr7 (123-394)||(44190340-44190604)
chr7 (156-394)||(12754823-12755061)
chr7 (123-394)||(16462733-16462997)
chr7 (156-394)||(708679-708910)
chr7 (164-394)||(37539105-37539334)
chr7 (156-394)||(25942134-25942366)
chr7 (156-331)||(47975049-47975225)
chr7 (110-226)||(14188404-14188520)
chr7 (3-141)||(12207693-12207829)
chr7 (110-226)||(11661931-11662047)
chr7 (110-226)||(16107969-16108085)
chr7 (110-228)||(1856511-1856629)
chr7 (3-141)||(12201088-12201224)
chr7 (120-231)||(13256513-13256624)
chr7 (123-210)||(13864486-13864573)
chr7 (110-228)||(13917683-13917801)
chr7 (110-228)||(25926410-25926528)
chr7 (123-208)||(18455712-18455797)
chr7 (194-394)||(24270142-24270337)
chr7 (3-103)||(7530081-7530181)
chr7 (123-180)||(23557404-23557461)
chr7 (155-210)||(14274063-14274118)
chr7 (3-103)||(39994857-39994958)
chr7 (156-228)||(13315239-13315311)
chr7 (152-228)||(16550156-16550232)
chr7 (152-228)||(16615430-16615506)
chr7 (178-226)||(17070470-17070518)
chr7 (2-146)||(15727367-15727512)
chr7 (345-394)||(11309814-11309863)
chr7 (123-180)||(23556215-23556272)
chr7 (152-228)||(32160354-32160430)
chr7 (152-210)||(29052336-29052394)
chr7 (156-250)||(33060240-33060333)
chr7 (156-226)||(42565990-42566060)
chr7 (110-163)||(42374415-42374468)
chr7 (41-97)||(14249708-14249764)
chr7 (164-228)||(19282868-19282932)
chr7 (156-236)||(38295416-38295496)
chr7 (1-56)||(42042163-42042218)
chr7 (1-35)||(11311080-11311114)
chr7 (1-29)||(11382870-11382898)
chr7 (1-29)||(11389347-11389375)
chr7 (41-97)||(14265178-14265234)
chr7 (3-62)||(15214543-15214603)
chr7 (1-29)||(16009604-16009632)
[»] chr4 (33 HSPs)
chr4 (78-398)||(16277366-16277686)
chr4 (78-398)||(53386976-53387296)
chr4 (4-226)||(15534947-15535169)
chr4 (4-226)||(36038636-36038858)
chr4 (4-226)||(49546949-49547170)
chr4 (156-394)||(35660543-35660782)
chr4 (156-385)||(19434817-19435046)
chr4 (78-226)||(33849568-33849716)
chr4 (156-331)||(14549368-14549544)
chr4 (156-304)||(16296617-16296765)
chr4 (110-226)||(28386069-28386185)
chr4 (298-394)||(630162-630258)
chr4 (123-210)||(15344776-15344863)
chr4 (3-141)||(32490656-32490792)
chr4 (3-153)||(15415882-15416031)
chr4 (123-210)||(12611752-12611839)
chr4 (123-208)||(15447501-15447586)
chr4 (110-231)||(18230561-18230682)
chr4 (123-208)||(23802528-23802613)
chr4 (123-210)||(51463152-51463239)
chr4 (3-153)||(16370724-16370872)
chr4 (3-124)||(15318849-15318969)
chr4 (1-84)||(15069727-15069812)
chr4 (1-88)||(15076323-15076412)
chr4 (152-228)||(10694399-10694475)
chr4 (123-210)||(13043893-13043980)
chr4 (178-226)||(9638833-9638881)
chr4 (152-228)||(10908165-10908241)
chr4 (152-228)||(40620354-40620430)
chr4 (110-169)||(45005827-45005886)
chr4 (156-247)||(14477436-14477526)
chr4 (2-62)||(56114762-56114823)
chr4 (156-220)||(18462853-18462917)
[»] chr2 (36 HSPs)
chr2 (82-398)||(20590365-20590681)
chr2 (4-226)||(13100739-13100961)
chr2 (4-226)||(10683937-10684159)
chr2 (4-226)||(20261985-20262207)
chr2 (110-393)||(41301040-41301327)
chr2 (156-394)||(149664-149902)
chr2 (78-226)||(23338478-23338626)
chr2 (164-394)||(1383818-1384041)
chr2 (167-389)||(28345205-28345426)
chr2 (156-394)||(36734610-36734840)
chr2 (110-226)||(21072799-21072915)
chr2 (123-210)||(43707171-43707258)
chr2 (3-144)||(25652134-25652273)
chr2 (123-210)||(7187267-7187354)
chr2 (123-210)||(22173101-22173188)
chr2 (110-228)||(31345943-31346061)
chr2 (3-153)||(24161179-24161328)
chr2 (152-228)||(18358121-18358197)
chr2 (152-236)||(19647048-19647132)
chr2 (152-228)||(25184011-25184087)
chr2 (152-228)||(21081123-21081199)
chr2 (156-220)||(45535756-45535820)
chr2 (151-218)||(14183619-14183686)
chr2 (159-250)||(20006133-20006223)
chr2 (153-210)||(12626587-12626644)
chr2 (165-210)||(31521018-31521063)
chr2 (2-62)||(23086392-23086452)
chr2 (150-208)||(14179880-14179938)
chr2 (41-103)||(22795837-22795899)
chr2 (156-210)||(28652709-28652763)
chr2 (1-29)||(6483745-6483773)
chr2 (1-29)||(6487212-6487240)
chr2 (3-62)||(10039062-10039122)
chr2 (1-29)||(21908387-21908415)
chr2 (1-29)||(23265170-23265198)
chr2 (1-29)||(23280238-23280266)
[»] chr5 (35 HSPs)
chr5 (154-394)||(24668312-24668552)
chr5 (154-394)||(24738081-24738321)
chr5 (154-394)||(24750850-24751090)
chr5 (110-390)||(18419113-18419393)
chr5 (1-226)||(41875594-41875819)
chr5 (4-226)||(9776931-9777153)
chr5 (1-226)||(37804074-37804299)
chr5 (154-295)||(24594218-24594359)
chr5 (156-394)||(36508901-36509139)
chr5 (194-394)||(16604759-16604959)
chr5 (110-226)||(27868685-27868801)
chr5 (290-394)||(24617174-24617278)
chr5 (290-394)||(24746433-24746537)
chr5 (110-226)||(33472674-33472790)
chr5 (3-144)||(7786090-7786229)
chr5 (290-394)||(24713405-24713509)
chr5 (3-132)||(26707296-26707423)
chr5 (3-132)||(26977030-26977157)
chr5 (123-208)||(22412930-22413015)
chr5 (2-97)||(17021914-17022010)
chr5 (152-228)||(17011550-17011626)
chr5 (152-228)||(265860-265936)
chr5 (152-236)||(21503953-21504037)
chr5 (2-153)||(21553390-21553541)
chr5 (152-228)||(29448662-29448738)
chr5 (159-210)||(30138244-30138295)
chr5 (156-229)||(21398956-21399029)
chr5 (155-210)||(17875897-17875952)
chr5 (2-62)||(36461034-36461095)
chr5 (3-61)||(17813473-17813533)
chr5 (1-29)||(18407943-18407971)
chr5 (1-29)||(19512414-19512442)
chr5 (156-236)||(20313089-20313169)
chr5 (1-29)||(23111199-23111227)
chr5 (1-29)||(28370054-28370082)
[»] chr1 (27 HSPs)
chr1 (110-394)||(22130136-22130420)
chr1 (41-394)||(23194554-23194906)
chr1 (110-394)||(45574130-45574407)
chr1 (156-394)||(7052171-7052410)
chr1 (78-226)||(297181-297329)
chr1 (156-296)||(24723618-24723758)
chr1 (156-306)||(8306349-8306498)
chr1 (110-226)||(28313174-28313290)
chr1 (123-208)||(13880660-13880745)
chr1 (1-102)||(24476279-24476381)
chr1 (1-153)||(21526783-21526933)
chr1 (1-88)||(25091417-25091505)
chr1 (152-228)||(46197899-46197975)
chr1 (156-228)||(17901960-17902032)
chr1 (156-228)||(6833988-6834060)
chr1 (178-218)||(38056853-38056893)
chr1 (152-228)||(50001298-50001374)
chr1 (156-247)||(21188191-21188281)
chr1 (178-226)||(8276170-8276218)
chr1 (172-228)||(29763806-29763862)
chr1 (156-231)||(21239201-21239276)
chr1 (345-398)||(10812867-10812920)
chr1 (3-42)||(8686037-8686076)
chr1 (2-61)||(21180280-21180339)
chr1 (41-88)||(21986077-21986124)
chr1 (1-29)||(20437023-20437051)
chr1 (1-29)||(32651600-32651628)
[»] scaffold0151 (1 HSPs)
scaffold0151 (121-393)||(9753-10025)
[»] chr6 (34 HSPs)
chr6 (2-226)||(28288510-28288733)
chr6 (1-226)||(12942955-12943180)
chr6 (194-394)||(19234782-19234981)
chr6 (164-394)||(35057201-35057430)
chr6 (110-226)||(13765172-13765288)
chr6 (110-226)||(23956688-23956804)
chr6 (120-226)||(31021842-31021948)
chr6 (3-153)||(9184999-9185150)
chr6 (123-210)||(611641-611728)
chr6 (110-208)||(23225968-23226066)
chr6 (164-398)||(13285401-13285634)
chr6 (3-102)||(18138497-18138596)
chr6 (123-210)||(20556156-20556243)
chr6 (125-208)||(25619023-25619106)
chr6 (110-228)||(23415728-23415846)
chr6 (123-197)||(14978665-14978739)
chr6 (110-228)||(27557486-27557604)
chr6 (152-228)||(15891723-15891799)
chr6 (152-228)||(15900808-15900884)
chr6 (156-228)||(29045086-29045158)
chr6 (2-146)||(1588649-1588794)
chr6 (1-88)||(21470738-21470826)
chr6 (1-88)||(21477238-21477326)
chr6 (1-88)||(25773516-25773605)
chr6 (152-228)||(15173607-15173683)
chr6 (178-226)||(19825667-19825715)
chr6 (162-208)||(5833817-5833863)
chr6 (152-210)||(18585519-18585577)
chr6 (1-35)||(25348509-25348543)
chr6 (2-62)||(1254822-1254883)
chr6 (1-29)||(4477885-4477913)
chr6 (1-29)||(9187523-9187551)
chr6 (183-247)||(14993611-14993674)
chr6 (1-29)||(23839226-23839254)
[»] scaffold0016 (2 HSPs)
scaffold0016 (123-390)||(174232-174499)
scaffold0016 (3-146)||(182049-182192)
[»] chr8 (34 HSPs)
chr8 (110-394)||(25483552-25483829)
chr8 (163-394)||(36732649-36732879)
chr8 (152-394)||(22483443-22483678)
chr8 (110-226)||(8413859-8413975)
chr8 (110-226)||(19882773-19882889)
chr8 (3-146)||(22617542-22617684)
chr8 (123-208)||(23661140-23661225)
chr8 (123-207)||(20455831-20455915)
chr8 (123-208)||(17460331-17460416)
chr8 (123-204)||(20463042-20463123)
chr8 (128-207)||(20460809-20460888)
chr8 (110-226)||(11775548-11775655)
chr8 (120-228)||(14397031-14397138)
chr8 (128-207)||(20455095-20455174)
chr8 (152-228)||(25657668-25657744)
chr8 (152-228)||(16198658-16198734)
chr8 (152-228)||(23478904-23478980)
chr8 (2-153)||(20387386-20387536)
chr8 (152-210)||(19880663-19880721)
chr8 (152-210)||(20879313-20879371)
chr8 (152-210)||(26454546-26454604)
chr8 (1-62)||(43113017-43113078)
chr8 (150-218)||(12037316-12037384)
chr8 (4-62)||(364854-364913)
chr8 (160-210)||(20517218-20517268)
chr8 (41-103)||(21299350-21299412)
chr8 (1-35)||(39364942-39364976)
chr8 (2-35)||(14056564-14056597)
chr8 (2-62)||(22433615-22433676)
chr8 (2-35)||(25111998-25112031)
chr8 (1-29)||(18614300-18614328)
chr8 (3-62)||(20494351-20494411)
chr8 (3-61)||(21860535-21860595)
chr8 (1-29)||(23482052-23482080)
[»] scaffold0070 (1 HSPs)
scaffold0070 (22-394)||(8754-9119)
[»] scaffold0334 (1 HSPs)
scaffold0334 (110-390)||(1786-2066)
[»] scaffold0364 (1 HSPs)
scaffold0364 (123-394)||(7830-8092)
[»] scaffold0026 (2 HSPs)
scaffold0026 (152-394)||(21778-22020)
scaffold0026 (41-101)||(36502-36562)
[»] scaffold0040 (1 HSPs)
scaffold0040 (162-394)||(106325-106558)
[»] scaffold0555 (1 HSPs)
scaffold0555 (152-389)||(8951-9181)
[»] scaffold0004 (3 HSPs)
scaffold0004 (3-140)||(385070-385208)
scaffold0004 (156-228)||(66237-66308)
scaffold0004 (1-29)||(116924-116952)
[»] scaffold0058 (1 HSPs)
scaffold0058 (110-262)||(39923-40075)
[»] scaffold0149 (1 HSPs)
scaffold0149 (156-315)||(21275-21434)
[»] scaffold0001 (2 HSPs)
scaffold0001 (110-226)||(169265-169381)
scaffold0001 (110-226)||(176618-176734)
[»] scaffold0956 (1 HSPs)
scaffold0956 (123-209)||(2219-2305)
[»] scaffold1276 (1 HSPs)
scaffold1276 (110-231)||(960-1081)
[»] scaffold0453 (1 HSPs)
scaffold0453 (110-226)||(7121-7237)
[»] scaffold0422 (1 HSPs)
scaffold0422 (110-226)||(3789-3905)
[»] scaffold0057 (2 HSPs)
scaffold0057 (123-210)||(72278-72365)
scaffold0057 (152-228)||(70007-70083)
[»] scaffold0106 (1 HSPs)
scaffold0106 (124-218)||(21817-21911)
[»] scaffold0090 (1 HSPs)
scaffold0090 (3-135)||(31449-31580)
[»] scaffold0200 (1 HSPs)
scaffold0200 (110-226)||(18419-18535)
[»] scaffold0086 (1 HSPs)
scaffold0086 (164-366)||(35652-35845)
[»] scaffold1439 (1 HSPs)
scaffold1439 (123-210)||(917-1004)
[»] scaffold0877 (1 HSPs)
scaffold0877 (123-208)||(2151-2236)
[»] scaffold0290 (1 HSPs)
scaffold0290 (123-208)||(916-1001)
[»] scaffold0125 (2 HSPs)
scaffold0125 (123-208)||(1174-1259)
scaffold0125 (156-229)||(28373-28446)
[»] scaffold0394 (1 HSPs)
scaffold0394 (123-210)||(12891-12978)
[»] scaffold0480 (1 HSPs)
scaffold0480 (1-102)||(1419-1521)
[»] scaffold0051 (1 HSPs)
scaffold0051 (110-228)||(31967-32084)
[»] scaffold0293 (1 HSPs)
scaffold0293 (110-228)||(19410-19528)
[»] scaffold0112 (1 HSPs)
scaffold0112 (123-208)||(23247-23332)
[»] scaffold0037 (1 HSPs)
scaffold0037 (129-210)||(82839-82920)
[»] scaffold0676 (1 HSPs)
scaffold0676 (156-252)||(2612-2708)
[»] scaffold0083 (2 HSPs)
scaffold0083 (123-195)||(42153-42225)
scaffold0083 (152-228)||(1759-1835)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-153)||(189630-189779)
[»] scaffold0061 (2 HSPs)
scaffold0061 (152-226)||(14740-14814)
scaffold0061 (152-226)||(23798-23872)
[»] scaffold0046 (2 HSPs)
scaffold0046 (152-228)||(21931-22007)
scaffold0046 (43-88)||(71510-71555)
[»] scaffold0117 (1 HSPs)
scaffold0117 (110-209)||(42514-42613)
[»] scaffold0023 (1 HSPs)
scaffold0023 (123-210)||(163175-163262)
[»] scaffold0138 (1 HSPs)
scaffold0138 (152-228)||(20919-20995)
[»] scaffold0034 (1 HSPs)
scaffold0034 (152-228)||(29370-29446)
[»] scaffold0790 (1 HSPs)
scaffold0790 (2-88)||(5421-5508)
[»] scaffold0462 (3 HSPs)
scaffold0462 (164-231)||(1089-1156)
scaffold0462 (164-231)||(6595-6662)
scaffold0462 (152-228)||(11045-11121)
[»] scaffold0439 (1 HSPs)
scaffold0439 (152-210)||(12081-12139)
[»] scaffold0220 (1 HSPs)
scaffold0220 (178-226)||(13772-13820)
[»] scaffold0213 (1 HSPs)
scaffold0213 (164-231)||(18934-19001)
[»] scaffold0436 (1 HSPs)
scaffold0436 (152-228)||(8782-8858)
[»] scaffold0217 (1 HSPs)
scaffold0217 (156-228)||(28536-28608)
[»] scaffold0328 (1 HSPs)
scaffold0328 (180-236)||(18824-18882)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-138)||(9569-9708)
[»] scaffold0113 (1 HSPs)
scaffold0113 (152-223)||(35319-35390)
[»] scaffold0278 (1 HSPs)
scaffold0278 (110-168)||(23829-23887)
[»] scaffold0205 (1 HSPs)
scaffold0205 (156-218)||(5774-5836)
[»] scaffold0696 (1 HSPs)
scaffold0696 (3-42)||(3342-3381)
[»] scaffold0594 (1 HSPs)
scaffold0594 (156-215)||(2075-2134)
[»] scaffold0371 (1 HSPs)
scaffold0371 (2-61)||(8516-8575)
[»] scaffold0092 (1 HSPs)
scaffold0092 (156-247)||(38600-38690)
[»] scaffold0230 (1 HSPs)
scaffold0230 (152-210)||(6948-7006)
[»] scaffold0148 (1 HSPs)
scaffold0148 (156-218)||(8673-8735)
[»] scaffold0007 (1 HSPs)
scaffold0007 (160-210)||(19022-19072)
[»] scaffold0599 (1 HSPs)
scaffold0599 (2-62)||(1062-1123)
[»] scaffold0256 (1 HSPs)
scaffold0256 (162-199)||(2005-2042)
[»] scaffold0071 (1 HSPs)
scaffold0071 (2-61)||(51991-52052)
[»] scaffold0635 (1 HSPs)
scaffold0635 (3-62)||(7948-8008)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-29)||(7-35)
[»] scaffold0222 (1 HSPs)
scaffold0222 (1-29)||(16848-16876)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-29)||(13660-13688)
[»] scaffold0049 (2 HSPs)
scaffold0049 (41-97)||(42111-42167)
scaffold0049 (41-97)||(52806-52862)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-29)||(101927-101955)


Alignment Details
Target: chr3 (Bit Score: 352; Significance: 0; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 3 - 394
Target Start/End: Original strand, 55291605 - 55291996
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55291605 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 55291704  T
Q  103 gggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatca 202  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  55291705 gggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatca 55291804  T
Q  203 aatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcg 302  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  55291805 aatttggggtttgggttgatgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcactattagcg 55291904  T
Q  303 aaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  55291905 aaactccctataactatttcgctattagctcacttttcgccattagcgaaattgcccagtgacaacataccctgttttatgttcttgcgtct 55291996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 22 - 399
Target Start/End: Original strand, 46722609 - 46722986
Alignment:
Q  22 ctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46722609 ctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggat 46722708  T
Q  122 tgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtaga 221  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |     
T  46722709 tgaaaagtgtggaaactatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttcggttgc 46722808  T
Q  222 tgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 321  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46722809 tgaaatttgttttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 46722908  T
Q  322 cgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtctgtttt 399  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||||| |||| ||||    
T  46722909 cgctattagctcacttttcgccattagcgaacttgcccagtgacagcataccctgttttatgttcttgtgtctttttt 46722986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 78 - 398
Target Start/End: Complemental strand, 10555280 - 10554960
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10555280 aattgggaattggggtttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 10555181  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 277  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10555180 taatcataggttaagtttcctatcaaatttggggtttcggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 10555081  T
Q  278 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgt 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  10555080 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccttgt 10554981  T
Q  378 tttatgttcttgcgtctgttt 398  Q
    |||||||||||||||||||||    
T  10554980 tttatgttcttgcgtctgttt 10554960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 12306113 - 12305888
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12306113 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtt 12306014  T
Q  101 ttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctat 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||||||    
T  12306013 tttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctat 12305914  T
Q  201 caaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||| |||||||    
T  12305913 caaatttggggtttgggtggatgaaa 12305888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 3803864 - 3803639
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3803864 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtt 3803765  T
Q  101 ttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctat 200  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||||||    
T  3803764 tttggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctat 3803665  T
Q  201 caaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||| |||||||    
T  3803664 caaatttggggtttgggtggatgaaa 3803639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 123 - 392
Target Start/End: Complemental strand, 43929319 - 43929050
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 222  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  43929319 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggtagat 43929220  T
Q  223 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 322  Q
    | |||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||| |||||    
T  43929219 ggaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaggggaaaaactcgctaggagttcgctattggcgaaacactctgtaacaatttc 43929120  T
Q  323 gctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgt 392  Q
    |||||||||| |  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  43929119 gctattagctaacatttcgccattagcgaaattgctcagtgacagcatactctgttttatgttcttgcgt 43929050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 29544038 - 29544260
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  29544038 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 29544137  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||    
T  29544138 ggggtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaa 29544237  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    |||||||||||| || |||||||    
T  29544238 atttggggtttgagtggatgaaa 29544260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 120 - 327
Target Start/End: Original strand, 43549776 - 43549983
Alignment:
Q  120 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 219  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43549776 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggta 43549875  T
Q  220 gatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactat 319  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43549876 gatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactat 43549975  T
Q  320 ttcgctat 327  Q
    ||||||||    
T  43549976 ttcgctat 43549983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 54521810 - 54521588
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||     
T  54521810 aggtaagggtgagactatctctcaaggataatggttatataattctgatcttggtttagcatagttctagttgaaattggaaattgagggttaggttttt 54521711  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||  ||||||| |||||||||||||    
T  54521710 ggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaa 54521611  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  54521610 atttggggtttgggtggatgaaa 54521588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 110 - 394
Target Start/End: Original strand, 10833416 - 10833694
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||     
T  10833416 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtccagattgcagaataatcataggttaagtttcctatcaaatttg- 10833514  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
          ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  10833515 ------ggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaatggaaaaactcgctaggatttcgctattagcgaaactcc 10833608  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcgaa-attgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||||||||| ||||||| || ||| || | || ||||||||||||| | ||||||   ||||||||||||    
T  10833609 ctgtaactatttcgctattagctcacttttcgctatcagcaaatactgtccagtgacagcataccctgtttcgcgttcttgcgtct 10833694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 156 - 394
Target Start/End: Original strand, 6805085 - 6805316
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||       ||||||| |||||||| |||| || ||||||| |||||||    
T  6805085 aattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttg-------ggtagataaaatttggattttttgagtgaaaaatgtgcag 6805177  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 355  Q
    |||||||||||| | |||||||||||| ||| | ||||||||| ||||||| | ||||||| ||||||||||||||| | |||| || |||| |||||||    
T  6805178 aaatcgtaacagtaggggaaaaactcgttagaaattcgctattggcgaaaccctctgtaacaatttcgctattagctaactttttgctattaccgaaatt 6805277  T
Q  356 gcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||  ||||||||||| |   |||||||||||||||||||    
T  6805278 gcatagtgacagcatacctagttttatgttcttgcgtct 6805316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 42469 - 42353
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42469 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 42370  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  42369 ggtttgggtggatgaaa 42353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 15239108 - 15238972
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||    
T  15239108 aaggtaagggtgagactaactctcaatgataatggttatacaattctgattttggtttagcaaggttctagttaaaattgggaattgggggttaggtttt 15239009  T
Q  103 gggagtatgattcttggattgaaaagtgtagaaaccatg 141  Q
      |||||||||| ||| ||| || ||||||||| |||||    
T  15239008 --gagtatgatttttgaattaaagagtgtagaatccatg 15238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 16324651 - 16324767
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||| ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  16324651 tgatttttgaattggaaagtgtagaaaccattgaaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttgg 16324750  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  16324751 ggtttgggtggatgaaa 16324767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 6820098 - 6820011
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  6820098 gaaaagtgtagaaactatgtcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 6820011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 5224264 - 5224146
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  5224264 tgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 5224165  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | ||||||| |||||||||    
T  5224164 gatttgggttgatgaaatt 5224146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 18890331 - 18890249
Alignment:
Q  144 aattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18890331 aattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 18890249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 16644011 - 16643926
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  16644011 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagcttcctaacaaatttg 16643926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 13437180 - 13437072
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||||||||||    ||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  13437180 tgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttgg 13437081  T
Q  210 ggtttgggt 218  Q
    |||||||||    
T  13437080 ggtttgggt 13437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 15466036 - 15465918
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| ||||||||||||||| |||    
T  15466036 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgg 15465937  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | ||||||| |||||||||    
T  15465936 gatttgggttgatgaaatt 15465918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 26054545 - 26054663
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||| ||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  26054545 tgatttttgaattgaaaattgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 26054644  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | ||||||| |||||||||    
T  26054645 gatttgggttgatgaaatt 26054663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 50243741 - 50243656
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  50243741 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacaaatttg 50243656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 18893623 - 18893508
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||| |||| ||   |||||||||||||||||||||||| || || ||||||||||||||||||||| |||||||||||||    
T  18893623 tgatttttgaattgaaaagtgtaaaaac-atcgtaattgtgttaagaattgatgttcacgttgtggaataatcataggttaagttttctatcaaatttgg 18893525  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  18893524 ggtttgggtggatgaaa 18893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 24152509 - 24152593
Alignment:
Q  124 aaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  24152509 aaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcataacaaatttg 24152593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 11325049 - 11325199
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttt-agaatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| ||||||||| |||| ||| |||| ||||||||||| ||| | ||  |||||||||||| |||| || ||||||||||||||    
T  11325049 aaggtaagggtgagactaactctcaatgttaatagttctatacttctgattttgatttaacaaaggttctagttgaatttggaaaatgggggttaggttt 11325148  T
Q  102 tgggagtatga-ttcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |  || ||||| || ||| |||||| ||||||||||||||| |||| ||||||    
T  11325149 t--gactatgattttttgaattgaagagtgtagaaaccatggcaatagtgtta 11325199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12854990 - 12855112
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaa-ttgggggttaggt 99  Q
    |||||||||||   |||||||||||||||||||||||||||| ||||||||||||| ||||  | ||||||||||||||| || || |||| ||||||||    
T  12854990 ttaaggtaaggagtagactatctctcaatgataatggttatacaattctgattttgatttaacaaagttctagttgaaataggaaatttggaggttaggt 12855089  T
Q  100 tttgggagtatgattcttggattga 124  Q
    | |   ||||||||| |||||||||    
T  12855090 tct--aagtatgatttttggattga 12855112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 22652671 - 22652595
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  22652671 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 22652595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 16979810 - 16979734
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||  ||||||| |||||||||    
T  16979810 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggaatttgggttgatgaaatt 16979734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 13837190 - 13837039
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggt 99  Q
    ||||||||||||||||||| ||||||||||| || || | |||||||||||||||| ||||| ||  ||||| ||| ||||| |||| | ||| ||||||    
T  13837190 taaggtaagggtgagactaactctcaatgattatagtctgtataattctgattttgttttagcaagggttctggtt-aaatttggaaattgggattaggt 13837092  T
Q  100 tttgggagta-tgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |||  || || | ||| ||| |||||| |||||||||||||||||||||||||||    
T  13837091 ttt--gaatattaatttttgaattgaagagtgtagaaaccatgacaattgtgtta 13837039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 14641729 - 14641777
Alignment:
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  14641729 taatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 14641777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 13522502 - 13522560
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  13522502 taagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 13522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 48631230 - 48631172
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  48631230 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 48631172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 45803491 - 45803575
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 236  Q
    ||||||||||||| ||||| ||||||||| |||||||| ||||||||||  |||||||| || |||| | ||||| |||| ||||    
T  45803491 taagaattgatgtccaggttgtagaataaacataggttgagtttcctattgaatttgggattagggtggttgaaaattgggtttt 45803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 43549985 - 43550032
Alignment:
Q  347 agcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||    
T  43549985 agcgaaattgcccagtggcagcataccctgttttatgttcttgcgtct 43550032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 36528071 - 36528021
Alignment:
Q  345 ttagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtctg 395  Q
    ||||||||||||| | |||||| |||||||||||| |||||||||||||||    
T  36528071 ttagcgaaattgcacggtgacaacattctctgtttcatgttcttgcgtctg 36528021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 11913847 - 11913786
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || |||| |||||||||||||||| |||||    
T  11913847 taaggtaagggtgaggctaactctcaatgattataggttgtataattctgattttgatttag 11913786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 15233166 - 15233104
Alignment:
Q  77 aaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatg 141  Q
    ||||||||||||||||||||||||||  |||||||||| ||| ||| || ||||||||| |||||    
T  15233166 aaattgggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaatccatg 15233104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 50350976 - 50351048
Alignment:
Q  157 attgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 229  Q
    |||||||||||||| ||| ||||| ||||||   ||||| |||| ||||||||| ||||||||||||| ||||    
T  50350976 attgatgttcaggttgtataataaacataggaagagttttctataaaatttgggatttgggtagatgagattt 50351048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 3264808 - 3264861
Alignment:
Q  345 ttagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtctgttt 398  Q
    ||||||||||||| |||||||| |||||||| ||  ||||| ||||||||||||    
T  3264808 ttagcgaaattgcacagtgacatcattctctattgcatgtttttgcgtctgttt 3264861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 51602525 - 51602586
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  51602525 taaggtaagggtgaggctaactctcaatgattatagattgtataattctgattttgatttag 51602586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 9534383 - 9534355
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  9534383 ttaaggtaagggtgagactatctctcaat 9534355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 17240512 - 17240540
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  17240512 ttaaggtaagggtgagactatctctcaat 17240540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 18929301 - 18929273
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  18929301 ttaaggtaagggtgagactatctctcaat 18929273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 22 - 398
Target Start/End: Original strand, 14105450 - 14105826
Alignment:
Q  22 ctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggat 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14105450 ctctcaatgataatggttatataattctaattttggtttagaatagttctagctgaaattgggaattgggggttaggttttgggagtatgattcttggat 14105549  T
Q  122 tgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtaga 221  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14105550 tgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttga 14105649  T
Q  222 tgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14105650 tgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgttaggagttcgctattagcgaaactccctgtaactattt 14105749  T
Q  322 cgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtctgttt 398  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  14105750 cgctattagctcacttttcgccattagcgaaattgcccagtgacagcattccctattttatgttcttgcgtcagttt 14105826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 22 - 394
Target Start/End: Original strand, 14415467 - 14415839
Alignment:
Q  22 ctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggat 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14415467 ctctcaatgataatggttatataattctaattttggtttagaatagttctagctgaaattgggaattgggggttaggttttgggagtatgattcttggat 14415566  T
Q  122 tgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtaga 221  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14415567 tgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttga 14415666  T
Q  222 tgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14415667 tgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactattt 14415766  T
Q  322 cgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||| | |||||||||||||||||||||    
T  14415767 cgctattagctcacttttcgccattagcgaacttgcctagtgacagcataccctgttttatgttcttgcgtct 14415839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 78 - 398
Target Start/End: Original strand, 17505043 - 17505363
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17505043 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 17505142  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 277  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17505143 taatcataggttaagtttcctatcaaatttggagtttgggtagatgaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaa 17505242  T
Q  278 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgt 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17505243 actcgctaggagttcgctattagcaaaactccctgtaactatttcgctcttagctcagttttcgccattagcgaaattgcccagtgacagcattccctgt 17505342  T
Q  378 tttatgttcttgcgtctgttt 398  Q
    |||||||||||||||||||||    
T  17505343 tttatgttcttgcgtctgttt 17505363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 78 - 398
Target Start/End: Complemental strand, 17548171 - 17547851
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17548171 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 17548072  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 277  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17548071 taatcataggttaagtttcctatcaaatttggagtttgggtagatgaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaa 17547972  T
Q  278 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgt 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17547971 actcgctaggagttcgctattagcaaaactccctgtaactatttcgctcttagctcagttttcgccattagcgaaattgcccagtgacagcattccctgt 17547872  T
Q  378 tttatgttcttgcgtctgttt 398  Q
    |||||||||||||||||||||    
T  17547871 tttatgttcttgcgtctgttt 17547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 110 - 394
Target Start/End: Complemental strand, 13648223 - 13647939
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  13648223 tgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgg 13648124  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
    | ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13648123 gatttaggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaacttgctaggatttcgctattagcgaaactcc 13648024  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||| | |||||||||||||||| ||||    
T  13648023 ctgtaactatttcgctattagctcacttttcgctactagcgaaattgcctagtgacagcataccctgttttatgttcttgtgtct 13647939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 23664127 - 23664349
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  23664127 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 23664226  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||    
T  23664227 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaa 23664326  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  23664327 atttggggtttgggtggatgaaa 23664349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11304238 - 11304013
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11304238 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtt 11304139  T
Q  101 ttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctat 200  Q
    || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||||||    
T  11304138 tttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctat 11304039  T
Q  201 caaatttggggtttgggtagatgaaa 226  Q
    ||||||||| |||||||| |||||||    
T  11304038 caaatttggtgtttgggtggatgaaa 11304013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 127 - 390
Target Start/End: Complemental strand, 4326020 - 4325757
Alignment:
Q  127 agtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  4326020 agtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 4325921  T
Q  227 tttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgcta 326  Q
    ||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||| ||||| |||    
T  4325920 tttgggttttttaggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggaattcgctattggcgaaacactctgtaacaatttcacta 4325821  T
Q  327 ttagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgc 390  Q
    |||||| |  ||||||||||||||||||||| ||||||||||||   |||||||||||||||||    
T  4325820 ttagctaacctttcgccattagcgaaattgctcagtgacagcatatcctgttttatgttcttgc 4325757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 29797599 - 29797376
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||     
T  29797599 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagctgaaattgggaattgggggttaggttttt 29797500  T
Q  104 -ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatca 202  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||| | ||||||||| |||| ||| ||||||||||||    
T  29797499 tggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagtttcctatca 29797400  T
Q  203 aatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||| |||||||    
T  29797399 aatttggggtttgggtggatgaaa 29797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 29801418 - 29801195
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||     
T  29801418 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagctgaaattgggaattgggggttaggttttt 29801319  T
Q  104 -ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatca 202  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||| | ||||||||| |||| ||| ||||||||||||    
T  29801318 tggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagtttcctatca 29801219  T
Q  203 aatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||| |||||||    
T  29801218 aatttggggtttgggtggatgaaa 29801195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 123 - 394
Target Start/End: Original strand, 39431311 - 39431583
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 222  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||| |||||||| ||    
T  39431311 gaaaagtgtagaaaccatgtcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggatttgggtaaat 39431410  T
Q  223 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 322  Q
    ||||||||| |||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| | || |||| |||||    
T  39431411 gaaatttggattttttggatgaaaaatgtgcagaaatcgtaacaacaagggaaaaactcgctagaagttcgctattggcgaaaccctctctaacaatttc 39431510  T
Q  323 gctattagctcagttttcgccattagcgaaattgcccagtgacagcat-tctctgttttatgttcttgcgtct 394  Q
    |||||||||| | |||| ||| ||||||||||||| |||||||| |||  | |||||||||||||||||||||    
T  39431511 gctattagctaactttttgccgttagcgaaattgcacagtgacaacatacccctgttttatgttcttgcgtct 39431583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 154 - 394
Target Start/End: Complemental strand, 19195088 - 19194848
Alignment:
Q  154 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 253  Q
    ||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||    
T  19195088 agaattgttattcagattgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgc 19194989  T
Q  254 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 353  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||| ||||| | ||||||||||||||||||    
T  19194988 agaaatcgtaacagcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctactagctaacttttcgccattagcgaaa 19194889  T
Q  354 ttgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    |||| |||||| ||||| | |||||||||||||||||||||    
T  19194888 ttgcacagtgatagcataccctgttttatgttcttgcgtct 19194848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 123 - 394
Target Start/End: Original strand, 44190340 - 44190604
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 222  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  44190340 gaaaagtgaagaaaacatgacaattgagttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggatttgggtagat 44190439  T
Q  223 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 322  Q
    ||||||  |||||| ||| ||       |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||     
T  44190440 gaaattcagtttttttggatg-------tgcagaaatcataacagcaagggaaaaactcgctaggagttcgctattggcgaaacctcctgtaacaatttt 44190532  T
Q  323 gctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    |||||||||| | |||||||||||||||||||||| ||||| |||||| | || ||||||||| ||||||||    
T  44190533 gctattagctaacttttcgccattagcgaaattgctcagtggcagcataccctattttatgttattgcgtct 44190604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 156 - 394
Target Start/End: Original strand, 12754823 - 12755061
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || || |||| |||||||    
T  12754823 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgagtaaaaaatgtgcag 12754922  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 355  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||| |||| | ||||||| ||| ||||||||||| |  |||||| ||||||||||||    
T  12754923 aaatcgtaacagtaggggaaaaactcgctagaagtttgctattagctaaaccctctgtaacaattgcgctattagctaacgtttcgctattagcgaaatt 12755022  T
Q  356 gcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    || |||||||||||| | || ||| ||||||||||||||    
T  12755023 gcacagtgacagcataccctatttcatgttcttgcgtct 12755061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 123 - 394
Target Start/End: Complemental strand, 16462997 - 16462733
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 222  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||       |||||    
T  16462997 gaaatgtgtagaaacgatggcaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg-------tagat 16462905  T
Q  223 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 322  Q
    |||||||||||||| |||||||||| |||||||||||||||| || |  ||||||||| | ||| ||||||||||| ||||| | |  |||||| |||||    
T  16462904 gaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaaaagtagtggaaaaacttgatagaagttcgctattggcgaatccctttgtaacaatttc 16462805  T
Q  323 gctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    |||||||||| | ||||||| ||||||||| |||| |||||||||||| | || ||||||||||||| ||||    
T  16462804 gctattagctaacttttcgctattagcgaagttgcacagtgacagcatgccctattttatgttcttgtgtct 16462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 156 - 394
Target Start/End: Original strand, 708679 - 708910
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||| | |||||||| |||||||    
T  708679 aattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttg-------ggtagatgaaatttgggtttttttggtgaaaaatgtgcag 708771  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 355  Q
    |||||||||||||  |||||||||||||||| ||||  ||||| | ||||| | ||||||| ||||||||||||||| | ||||||| ||||||||||||    
T  708772 aaatcgtaacagcgggggaaaaactcgctagaagttttctattggtgaaaccctctgtaacaatttcgctattagctaacttttcgctattagcgaaatt 708871  T
Q  356 gcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    || |||||||||||| | |||||||||||||||||||||    
T  708872 gcacagtgacagcataccctgttttatgttcttgcgtct 708910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 164 - 394
Target Start/End: Complemental strand, 37539334 - 37539105
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaat-tgtgcagaaatcgt 262  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||  |||| |||||||||    
T  37539334 ttcaggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggtagatgaaatttggatttt-tgggtgaaaaagtgtgtagaaatcgt 37539236  T
Q  263 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagt 362  Q
    ||||||| ||||||| |||||||| ||||||||||| ||||||  | || |||| ||||||||| |||||   |||||||||||||||||||||| ||||    
T  37539235 aacagcatgggaaaa-ctcgctagaagttcgctattggcgaaatcctctataacaatttcgctaatagctagattttcgccattagcgaaattgcacagt 37539137  T
Q  363 gacagcattctctgttttatgttcttgcgtct 394  Q
    |||||||| |||||||| ||||||||| ||||    
T  37539136 gacagcatactctgtttcatgttcttgggtct 37539105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 156 - 394
Target Start/End: Complemental strand, 25942366 - 25942134
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 254  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||||| |||| |    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg-------tagatgaaatttgggtttttttgggtgaaaaatgtgta 25942274  T
Q  255 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 354  Q
    ||||||||||||||| | |||||||||||||| ||||||||||| | ||||  | ||||||| |||||| ||||||||   |||||| ||||||||||||    
T  25942273 gaaatcgtaacagcaggagaaaaactcgctagaagttcgctattggtgaaatcctctgtaacaatttcgatattagctagattttcgacattagcgaaat 25942174  T
Q  355 tgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||| |||||||||||| |||||||| ||||| ||| ||||    
T  25942173 tgcacagtgacagcatactctgtttcatgtttttgtgtct 25942134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 156 - 331
Target Start/End: Original strand, 47975049 - 47975225
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 254  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||| ||||| | |||||||| ||||||    
T  47975049 aattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgggtagatgaaatttgggtttttttcggtgaaaaatgtgca 47975148  T
Q  255 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagc 331  Q
     |||||||||||| | |||||||||||||||| ||||||||||| ||||||| | ||||||| ||||||||||||||    
T  47975149 aaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaaaccctctgtaacaatttcgctattagc 47975225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 14188404 - 14188520
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||| |||||||||||||   |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  14188404 tgatttttgaattgaaatgtgtagaaaccatcgaaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttgg 14188503  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  14188504 ggtttgggtggatgaaa 14188520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 12207693 - 12207829
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  12207693 aaggtaagggtgagactaactctcaatgataatggttgtacaattctgattttggtttagcaaggttctagttgaaattgggaattgggggttaggtttt 12207792  T
Q  103 gggagtatgattcttggattgaaaagtgtagaaaccatg 141  Q
      ||||||| || ||| ||| || ||||||||| |||||    
T  12207793 --gagtatgctttttgaattaaagagtgtagaatccatg 12207829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 11662047 - 11661931
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||| |||||||   ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  11662047 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttgg 11661948  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  11661947 ggtttgggtggatgaaa 11661931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 16107969 - 16108085
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  16107969 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttgg 16108068  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  16108069 ggtttgggtggatgaaa 16108085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 1856511 - 1856629
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  1856511 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 1856610  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | ||||||| |||||||||    
T  1856611 gatttgggttgatgaaatt 1856629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 12201088 - 12201224
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||| ||||||||| |||| ||| || ||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||    
T  12201088 aaggtaagggtgagactaactctcaatggtaatagttgtacaattctgattttggtttagcaagattctagttgaaattgggaattgggggttaggtttt 12201187  T
Q  103 gggagtatgattcttggattgaaaagtgtagaaaccatg 141  Q
      |||||||||| ||  ||| || ||||||||| |||||    
T  12201188 --gagtatgatttttcaattaaagagtgtagaatccatg 12201224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 13256624 - 13256513
Alignment:
Q  120 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 219  Q
    ||||||||||||||||| |||   |||||||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||| |||||||     
T  13256624 attgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgggatttgggtt 13256525  T
Q  220 gatgaaatttgg 231  Q
    ||||||| ||||    
T  13256524 gatgaaaattgg 13256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 13864486 - 13864573
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||    
T  13864486 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcagattgtataataatcataggttaagtttcctaacaaatttggg 13864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 13917683 - 13917801
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  13917683 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 13917782  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | | ||||| |||||||||    
T  13917783 gatctgggttgatgaaatt 13917801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 25926410 - 25926528
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||| ||||||||    
T  25926410 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgg 25926509  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | ||||||| |||||||||    
T  25926510 gatttgggttgatgaaatt 25926528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 18455712 - 18455797
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||    
T  18455712 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctaacaaatttg 18455797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 394
Target Start/End: Original strand, 24270142 - 24270337
Alignment:
Q  194 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 293  Q
    ||||||||||||||||| |||| ||||||||||||||  |||| | |||||||| |||| |||||||||||      |||||||||||||||| ||||||    
T  24270142 ttcctatcaaatttgggatttgagtagatgaaatttgagtttttttggtgaaaaatgtgtagaaatcgtaag-----gggaaaaactcgctagaagttcg 24270236  T
Q  294 ctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgt 392  Q
    ||||| ||||||  | ||||||| |||||| || |||| ||| |||| ||| ||||| ||||||| |||||||| ||| |  ||||| ||||||||||||    
T  24270237 ctattggcgaaatcctctgtaacaatttcggtaatagc-cagatttttgccgttagcaaaattgcacagtgacaacataccttgtttcatgttcttgcgt 24270335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 7530181 - 7530081
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| |||||||||||||  ||| |||| ||||||||||| ||||| || ||||||||||||| |||| ||||||||| |||||||    
T  7530181 aaggtaagggtgagactaactctcaatgataacagttgtatacttctgattttgatttagcaagagttctagttgaatttggaaattggggg-taggttt 7530083  T
Q  102 tg 103  Q
    ||    
T  7530082 tg 7530081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 23557461 - 23557404
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataa 180  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  23557461 gaaaagtgtagaaaccatgacaattgtgttatgaattgatgttcaggttgtagaataa 23557404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 14274118 - 14274063
Alignment:
Q  155 gaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  14274118 gaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 14274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 39994857 - 39994958
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttt-agaatagttctagttgaaattgggaattgggggttaggttt 101  Q
    ||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||| ||| | ||  |||||||||||| |||| |||| ||||||||||||    
T  39994857 aaggtaaaggtgagactaactctcaatgataatagttctatacttctgattttgatttaacaagggttctagttgaatttggaaattaggggttaggttt 39994956  T
Q  102 tg 103  Q
    ||    
T  39994957 tg 39994958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 13315239 - 13315311
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||    
T  13315239 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatgaaatt 13315311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 16550156 - 16550232
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  16550156 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaatt 16550232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 16615506 - 16615430
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  16615506 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaatt 16615430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 17070470 - 17070518
Alignment:
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17070470 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 17070518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 15727367 - 15727512
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggttta--gaatagttctagttgaaattgggaattgggggttagg 98  Q
    ||||||||||||||||||| ||||||||||| || || |||||||||||||| ||| ||||   ||  ||||||||| || |||||| ||| || |||||    
T  15727367 taaggtaagggtgagactaactctcaatgattatagtctatataattctgatgttgatttaacaaagggttctagtt-aatttgggatttgaggtttagg 15727465  T
Q  99 ttttgggagtat-gattcttggattgaaaagtgtagaaaccatgacaat 146  Q
    ||||  || ||| |||| ||| |||||||||||||||||||||||||||    
T  15727466 tttt--gattatagatttttgaattgaaaagtgtagaaaccatgacaat 15727512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 11309863 - 11309814
Alignment:
Q  345 ttagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  11309863 ttagcgaaattgcacagtgacagcattctctgtttcatgttcttgcgtct 11309814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 23556272 - 23556215
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataa 180  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  23556272 gaaaagtgtagaaaccatgacaatcgtgttatgaattgatgttaaggttgtagaataa 23556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 32160354 - 32160430
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | ||||| | |||||||||    
T  32160354 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttggattgatgaaatt 32160430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 29052336 - 29052394
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  29052336 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 29052394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 33060333 - 33060240
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattg 250  Q
    ||||||||||||||| |||||||||  |||||| | ||||| |||| |||||||| ||||||||| || |||| || |||| ||| |||||||||    
T  33060333 aattgatgttcaggtcgtagaataacaataggtaatgtttcatatcgaatttgggatttgggtagttgtaattggggtttt-tggatgaaaattg 33060240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 42565990 - 42566060
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||||  |||||| | |||||||||||||||||   ||||||||| |||||    
T  42565990 aattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgaaatttgggtagttgaaa 42566060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 42374415 - 42374468
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatg 163  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||    
T  42374415 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatg 42374468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 14249708 - 14249764
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 97  Q
    |||||||||||||||||||||  |||||||| ||| |||||||||||| ||| ||||    
T  14249708 tataattctgattttggtttaacatagttctggttaaaattgggaatttgggtttag 14249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 19282932 - 19282868
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||||| |||||||||||||||||  ||||| |||||||||||||  ||||| | |||||||||    
T  19282932 ttcaggttgtagaataatcataggtagagttttctatcaaatttggaatttggattgatgaaatt 19282868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 38295496 - 38295416
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 236  Q
    ||||| ||||||||  |||||||||||||||||  ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  38295496 aattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 38295416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42042218 - 42042163
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttg 56  Q
    |||||||||||||||||||| ||||||||||| || | | ||| ||||||||||||    
T  42042218 ttaaggtaagggtgagactaactctcaatgattatagatgtatgattctgattttg 42042163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 11311114 - 11311080
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataat 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  11311114 ttaaggtaagggtgagactatctctcaataataat 11311080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 11382870 - 11382898
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  11382870 ttaaggtaagggtgagactatctctcaat 11382898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 11389347 - 11389375
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  11389347 ttaaggtaagggtgagactatctctcaat 11389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 14265178 - 14265234
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 97  Q
    ||||||||||||||| |||||  |||||||| ||| |||||||||||| ||| ||||    
T  14265178 tataattctgattttagtttaacatagttctggttaaaattgggaatttgggtttag 14265234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 15214603 - 15214543
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  15214603 aaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 15214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 16009632 - 16009604
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  16009632 ttaaggtaagggtgagactatctctcaat 16009604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 297; Significance: 1e-167; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 78 - 398
Target Start/End: Original strand, 16277366 - 16277686
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16277366 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 16277465  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16277466 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaaattggtttttctgggtgaaaattgtgcagaaatcgcaacagcaagggaaaa 16277565  T
Q  278 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgt 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  16277566 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagcttagttttcgccattagcgaaattgcccagtgacagcattccctgt 16277665  T
Q  378 tttatgttcttgcgtctgttt 398  Q
    ||||||||||| |||||||||    
T  16277666 tttatgttcttccgtctgttt 16277686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 78 - 398
Target Start/End: Original strand, 53386976 - 53387296
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53386976 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 53387075  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53387076 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaaattggtttttctgggtgaaaattgtgcagaaatcgtaacagtaagggaaaa 53387175  T
Q  278 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgt 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  53387176 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattcgctcagttttcgccattagcgaaattgtccagtgacaacattccctgt 53387275  T
Q  378 tttatgttcttgcgtctgttt 398  Q
    |||||||||||||||||||||    
T  53387276 tttatgttcttgcgtctgttt 53387296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 15535169 - 15534947
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  15535169 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 15535070  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| |||||||||||||    
T  15535069 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaa 15534970  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  15534969 atttggggtttgggtggatgaaa 15534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 36038858 - 36038636
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  36038858 aggtaagggtgagactatctctcaatggtaatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 36038759  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||    
T  36038758 ggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaa 36038659  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  36038658 atttggggtttgggtggatgaaa 36038636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 49546949 - 49547170
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||     
T  49546949 aggtaagggtgagactatctctcaatgataatggttatataattctgatcttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 49547048  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||    
T  49547049 ggagtacga-tcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaa 49547147  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  49547148 atttggggtttgggtggatgaaa 49547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 156 - 394
Target Start/End: Complemental strand, 35660782 - 35660543
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 254  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||| ||||||    
T  35660782 aattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttttggtgaaaaatgtgca 35660683  T
Q  255 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 354  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||||| ||| | |||| ||||||||||||||    
T  35660682 gaaatcgtaacagcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattcgctaactttttgccattagcgaaat 35660583  T
Q  355 tgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||| |||||||||||| |  ||||||||||||||||||||    
T  35660582 tgcacagtgacagcataccatgttttatgttcttgcgtct 35660543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 156 - 385
Target Start/End: Original strand, 19434817 - 19435046
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||| |||||||||| |||||||    
T  19434817 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattttggtagatgaaatttgagttttttgggtgaaaaatgtgcag 19434916  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 355  Q
    |||||||||||| | |||||||||||||||| |||| |||||| ||||| | | ||||||| |||||||||||||||   | ||||| ||||||||||||    
T  19434917 aaatcgtaacagtaggggaaaaactcgctagaagtttgctattggcgaatccctctgtaacaatttcgctattagctacctgttcgctattagcgaaatt 19435016  T
Q  356 gcccagtgacagcattctctgttttatgtt 385  Q
    || |||||||| ||| ||||||||||||||    
T  19435017 gcacagtgacaacatactctgttttatgtt 19435046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 33849716 - 33849568
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  33849716 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcatgttgtagaa 33849617  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  33849616 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 33849568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 14549544 - 14549368
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt-ggtttttctgggtgaaaattgtgca 254  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||    
T  14549544 aattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgca 14549445  T
Q  255 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagc 331  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||| ||||| | | ||||||| ||||||||||||||    
T  14549444 gaaatcgtaacagtaggggaaaaactcgctagaagttctctattggcgaatccctctgtaacaatttcgctattagc 14549368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 156 - 304
Target Start/End: Complemental strand, 16296765 - 16296617
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||| |||||||||| |||||||    
T  16296765 aattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagattaaattttggttttttgggtgaaaaatgtgcag 16296666  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaa 304  Q
    |||| ||||||| |||||||||||||||||| ||||||||||| |||||    
T  16296665 aaattgtaacagtaagggaaaaactcgctagaagttcgctattggcgaa 16296617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 28386185 - 28386069
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28386185 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 28386086  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  28386085 ggtttgggtggatgaaa 28386069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 298 - 394
Target Start/End: Original strand, 630162 - 630258
Alignment:
Q  298 tagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| | |||||||||||||||||||||    
T  630162 tagcgaaactccctgtaactatttcgctattagctcatttttcgctatcagcgaaattgcccagtgacagcataccctgttttatgttcttgcgtct 630258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 15344863 - 15344776
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15344863 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 15344776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 32490792 - 32490656
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||| ||||||||  ||||||||||| ||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||    
T  32490792 aaggtaagggtgagactaactctcaatagtaatggttatacaattctgattttgatttagcaaggttctagttgaaattgggaattgggggttaggtttt 32490693  T
Q  103 gggagtatgattcttggattgaaaagtgtagaaaccatg 141  Q
      |||||||||| ||| ||| || ||||||||| |||||    
T  32490692 --gagtatgatttttgaattaaagagtgtagaatccatg 32490656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 15415882 - 15416031
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||| ||||| ||  |||||||||||| |||||| |||||||||||||||    
T  15415882 aaggtaagggtgagactaactctcaatgataatagttctatacttctgattttgatttagcaagggttctagttgaatttgggatttgggggttaggttt 15415981  T
Q  102 tgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |  || ||||||| ||| |||||||||||||||| ||||| |||| ||||||    
T  15415982 t--gattatgatttttgaattgaaaagtgtagaatccatggcaatagtgtta 15416031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 12611839 - 12611752
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  12611839 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 12611752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 15447501 - 15447586
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  15447501 gaaaagtgcagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttgctaacaaatttg 15447586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 18230682 - 18230561
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||||||| |||   ||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  18230682 tgatttttgaattgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgg 18230583  T
Q  210 ggtttgggtagatgaaatttgg 231  Q
    | |||| || ||||||| ||||    
T  18230582 gatttgtgttgatgaaaattgg 18230561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 23802528 - 23802613
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23802528 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 51463152 - 51463239
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||    
T  51463152 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggtaaagttttctaacaaatttggg 51463239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 16370724 - 16370872
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| |||||||||||||| | | |||| ||||||||||| ||||| ||  |||||||||||| |||| |||||||||||||||||    
T  16370724 aaggtaagggtgagactaactctcaatgataatag-tgtatacttctgattttgatttagcaagggttctagttgaatttggaaattgggggttaggttt 16370822  T
Q  102 tgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |  || ||||||| ||| |||||| ||||||||||| ||| |||| ||||||    
T  16370823 t--gattatgatttttgaattgaagagtgtagaaactatggcaatggtgtta 16370872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 15318969 - 15318849
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaa-ttgggggttaggttt 101  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||||  | ||||||||||||||||||||| ||| ||||||||||     
T  15318969 aaggtaagggtgagactatctctcaatgatattggttctacaattctgattttgatttaacaaagttctagttgaaattgggaatttgcgggttaggttc 15318870  T
Q  102 tgggagtatgattcttggattga 124  Q
    |   ||||||||| |||||||||    
T  15318869 t--aagtatgatttttggattga 15318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15069812 - 15069727
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt--ggtttagaatagttctagttgaaattggg 84  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||  ||||||| |||||| |||| |||||||||    
T  15069812 ttaaggtaagggtgagactatctctcaataatgatggttatgtaattctgatttttgggtttagcatagttatagtagaaattggg 15069727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15076412 - 15076323
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt--ggtttagaatagttctagttgaaattgggaatt 88  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||  | ||||| ||||||||||| |||||| ||||||    
T  15076412 ttaaggtaagggtgagactatctctcaataatgatggttatgtaattctgatttttggatttagcatagttctagtagaaatttggaatt 15076323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 10694399 - 10694475
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  10694399 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 10694475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 13043893 - 13043980
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||  |||||| | ||| | |||||||||||||    
T  13043893 gaaaagtgtagaaaccatagtaattgtgttaagaattgatgttcaggttgtagaataacaataggtgatgttccttatcaaatttggg 13043980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 9638881 - 9638833
Alignment:
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9638881 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 9638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 10908165 - 10908241
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||   ||||||| |||||||||    
T  10908165 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgttatttgggttgatgaaatt 10908241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 40620430 - 40620354
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  |||| |||| |||||||| |||||||| ||||||||||| ||||||| |||||||||    
T  40620430 taagaattgaagttcaggccgtaggataaacataggttgagtttcctctcaaatttgggatttgggttgatgaaatt 40620354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 45005886 - 45005827
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcagg 169  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||    
T  45005886 tgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgatgttcagg 45005827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 14477526 - 14477436
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 247  Q
    ||||||||||||| | |||||||||  ||| || | ||||||| ||||||||||  ||||||||| ||||| ||||  ||||||||||||||    
T  14477526 aattgatgttcagattgtagaataacaataagtaatgtttcctgtcaaatttggaatttgggtagttgaaa-ttggggtttctgggtgaaaa 14477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 56114762 - 56114823
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  56114762 taaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 56114823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 18462917 - 18462853
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 220  Q
    ||||||||||||| | |||||| ||  |||||| | ||||||| ||||||||||| |||||||||    
T  18462917 aattgatgttcagattgtagaacaacaataggtaatgtttcctgtcaaatttgggatttgggtag 18462853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 82 - 398
Target Start/End: Original strand, 20590365 - 20590681
Alignment:
Q  82 gggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataat 181  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20590365 gggaattgggggttaggttttgggagtatgattattggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataat 20590464  T
Q  182 cataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactc 281  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20590465 cataggttaagttttctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactc 20590564  T
Q  282 gctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgtttta 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  20590565 gctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgaccagtgacagcattccctgtttta 20590664  T
Q  382 tgttcttgcgtctgttt 398  Q
    |||||||||||||||||    
T  20590665 tgttcttgcgtctgttt 20590681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 13100739 - 13100961
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||     
T  13100739 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgtgaattgggggttaggttttt 13100838  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||||    
T  13100839 ggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaa 13100938  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  13100939 atttggggtttgggtggatgaaa 13100961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 10683937 - 10684159
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  10683937 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 10684036  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| |||||||||||||    
T  10684037 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaa 10684136  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  10684137 atttggggtttgggtggatgaaa 10684159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 20262207 - 20261985
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  20262207 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 20262108  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| |||||||||||||    
T  20262107 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaa 20262008  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  20262007 atttggggtttgggtggatgaaa 20261985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 110 - 393
Target Start/End: Original strand, 41301040 - 41301327
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41301040 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgg 41301139  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
    | |||||||||||||||||||| |||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  41301140 gatttgggtagatgaaatttggattttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 41301239  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcga----aattgcccagtgacagcattctctgttttatgttcttgcgtc 393  Q
    ||||||||||||||||||||||||| ||||||| || |||||    |||||| |||||||||||| |  ||||||||||| |||||||    
T  41301240 ctgtaactatttcgctattagctcacttttcgctatcagcgaaattaattgctcagtgacagcataccttgttttatgtttttgcgtc 41301327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 156 - 394
Target Start/End: Original strand, 149664 - 149902
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||| |    
T  149664 aattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcgg 149763  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 355  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||| | ||||| | ||||||||||||||| | ||||||||||||||||||||    
T  149764 aaatcgtaacagcaggggagaaactcgctagaagttcgctattagcgaaaccctctgtagcaatttcgctattagctaacttttcgccattagcgaaatt 149863  T
Q  356 gcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    || |||||||||||| | |||||||||||||||||||||    
T  149864 gcacagtgacagcataccctgttttatgttcttgcgtct 149902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 23338478 - 23338626
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  23338478 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaa 23338577  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  23338578 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23338626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 164 - 394
Target Start/End: Original strand, 1383818 - 1384041
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgta 263  Q
    ||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||  |||| |||||||||| |||||||||||||||    
T  1383818 ttcaggttgtagaataatcataggttaagtttcctatcaaatttg-------ggtagatgaaatttgtgttttttgggtgaaaaatgtgcagaaatcgta 1383910  T
Q  264 acagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtg 363  Q
    |||||| | || ||||||||||| ||||||||||| ||||||  | ||||||| ||||||| ||||||| | ||||||||||||||||||||||  ||||    
T  1383911 acagcaggagagaaactcgctagaagttcgctattggcgaaatcctctgtaacgatttcgcgattagctaacttttcgccattagcgaaattgcaaagtg 1384010  T
Q  364 acagcattctctgttttatgttcttgcgtct 394  Q
    ||||||| | |||||| ||||| ||||||||    
T  1384011 acagcataccctgtttcatgtttttgcgtct 1384041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 167 - 389
Target Start/End: Original strand, 28345205 - 28345426
Alignment:
Q  167 aggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgtaac 265  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||| |||| |||| ||||||||||||    
T  28345205 aggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagataaaatttgggtttt-tgggtgaaaaagtgtgtagaaatcgtaac 28345303  T
Q  266 agcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccagtga 364  Q
    |||| ||| |||||||||||| ||||||||||| ||||||  | ||||||| ||||||||| |||| |||  ||||||||||||||||||||| ||||||    
T  28345304 agcatggg-aaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctaatagc-cagagtttcgccattagcgaaattgcacagtga 28345401  T
Q  365 cagcattctctgttttatgttcttg 389  Q
    |||||| | ||| || |||||||||    
T  28345402 cagcataccctgattcatgttcttg 28345426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 394
Target Start/End: Original strand, 36734610 - 36734840
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaat-tgtgca 254  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||       |||||||||||||| |||| | ||||||||  |||| |    
T  36734610 aattggtgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg-------tagatgaaatttgggtttt-taggtgaaaaagtgtgta 36734701  T
Q  255 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 354  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||  | ||||||| ||||| | | |||||   |||||||||||||||||||    
T  36734702 gaaattgtaacagcaggggaaaa-ctcgctagaagttcgctattggcgaaatcctctgtaacaatttcaccaatagctagattttcgccattagcgaaat 36734800  T
Q  355 tgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||| | |||||| ||| |||||||||||||||||||||||    
T  36734801 tgcactgtgacaacatactctgttttatgttcttgcgtct 36734840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 21072799 - 21072915
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||| |||||||   ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  21072799 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttgg 21072898  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  21072899 ggtttgggtggatgaaa 21072915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 43707171 - 43707258
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  43707171 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 25652273 - 25652134
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||    
T  25652273 aaggtaagggtgggactaactctcaatgataatagttatacaattctgattttggtttagcaagattctagttgaaattgggaattgggggttaggtttt 25652174  T
Q  103 gggagtatgattcttggattgaaaagtgtagaaaccatgaca 144  Q
      ||  |||||| ||| ||| || ||||||||| ||||||||    
T  25652173 --gatgatgatttttgaattaaagagtgtagaatccatgaca 25652134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 7187354 - 7187267
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||    
T  7187354 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttctggttgtagaataatcatagattaagtttcctaacaaatttggg 7187267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 22173101 - 22173188
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||    
T  22173101 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttatgttttctaacaaatttggg 22173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 31346061 - 31345943
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||   |||||||| |||||||| |||||||||||||||||||    
T  31346061 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttgg 31345962  T
Q  210 ggtttgggtagatgaaatt 228  Q
      ||||||| |||||||||    
T  31345961 tatttgggttgatgaaatt 31345943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 24161328 - 24161179
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||| ||||| ||  |||||||||||| |||| ||||||||||||| |||    
T  24161328 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttgatttagcaagggttctagttgaatttggaaattgggggttagattt 24161229  T
Q  102 tgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |  || ||||||| ||| ||| || |||||| |||||||| |||| ||||||    
T  24161228 t--gattatgatttttgaattaaagagtgtaaaaaccatggcaatggtgtta 24161179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 18358121 - 18358197
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  18358121 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 18358197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 19647132 - 19647048
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 236  Q
    ||||||||||||||||||| |||||||||  |||||| | ||||||||||||||||||| ||| ||||| ||||||| |||||||    
T  19647132 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgggatttaggtagttgaaattgggttttt 19647048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 25184087 - 25184011
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| ||||||   ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  25184087 taagaattgaagttcagactgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 25184011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 21081123 - 21081199
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||| ||| ||||||||||||||||| || ||||||| |||||||||    
T  21081123 taagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttaggatttgggttgatgaaatt 21081199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 45535820 - 45535756
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 220  Q
    ||||||||||||||| |||||||||  |||||| | ||||||| ||||||||||| |||||||||    
T  45535820 aattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatttgggtag 45535756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 14183619 - 14183686
Alignment:
Q  151 ttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 218  Q
    |||| ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||  |||||||    
T  14183619 ttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggaatttgggt 14183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 20006133 - 20006223
Alignment:
Q  159 tgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattg 250  Q
    ||||||||| || |||||||||  |||||| | ||||||||||||||||||| ||||||||| || |||| || |||| || ||||||||||    
T  20006133 tgatgttcatgttgtagaataacaataggtaatgtttcctatcaaatttgggatttgggtagttgtaattggggtttt-tgagtgaaaattg 20006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 12626587 - 12626644
Alignment:
Q  153 aagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||| ||||||||| |||| ||| ||||||||||  ||||||||    
T  12626587 aagaattgatgttcaggttgtagaataaacataagttgagtttcctattgaatttggg 12626644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 31521063 - 31521018
Alignment:
Q  165 tcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||    
T  31521063 tcaggttgtagaataatcataggttaagtttcctaactaatttggg 31521018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 23086452 - 23086392
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || | | |||||||||||||||| |||||    
T  23086452 taaggtaagggtgaggctaactctcaatgattatagatgtataattctgattttgatttag 23086392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 14179880 - 14179938
Alignment:
Q  150 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    ||||| ||||| ||||||||| || ||||||||||||||   |||||||||||||||||    
T  14179880 gttaataattggtgttcaggttgtggaataatcataggtagtgtttcctatcaaatttg 14179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 22795837 - 22795899
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    |||||||||||||||||||||   ||||||| || ||||||||||||| |||  |||||||||    
T  22795837 tataattctgattttggtttaacctagttctggtagaaattgggaatttgggtctaggttttg 22795899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 28652709 - 28652763
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||| ||||||||||||||||   ||||| |||| |||||||||    
T  28652709 aattgatgttcaggtagtagaataatcataggaagagttttctataaaatttggg 28652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 6483773 - 6483745
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  6483773 ttaaggtaagggtgagactatctctcaat 6483745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 6487240 - 6487212
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  6487240 ttaaggtaagggtgagactatctctcaat 6487212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 10039062 - 10039122
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  10039062 aaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 10039122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 21908415 - 21908387
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  21908415 ttaaggtaagggtgagactatctctcaat 21908387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 23265198 - 23265170
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  23265198 ttaaggtaagggtgagactatctctcaat 23265170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 23280266 - 23280238
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  23280266 ttaaggtaagggtgagactatctctcaat 23280238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 154 - 394
Target Start/End: Original strand, 24668312 - 24668552
Alignment:
Q  154 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24668411  T
Q  254 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 353  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  24668412 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24668511  T
Q  354 ttgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24668512 ttgcccagtgacagcattccctgttttatgttcttgcgtct 24668552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 154 - 394
Target Start/End: Original strand, 24738081 - 24738321
Alignment:
Q  154 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24738180  T
Q  254 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 353  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  24738181 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24738280  T
Q  354 ttgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24738281 ttgcccagtgacagcattccctgttttatgttcttgcgtct 24738321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 154 - 394
Target Start/End: Original strand, 24750850 - 24751090
Alignment:
Q  154 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24750949  T
Q  254 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 353  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  24750950 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24751049  T
Q  354 ttgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24751050 ttgcccagtgacagcattccctgttttatgttcttgcgtct 24751090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 110 - 390
Target Start/End: Complemental strand, 18419393 - 18419113
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||     
T  18419393 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttga 18419294  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
    | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18419293 gatttgggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 18419194  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgc 390  Q
    |||||||||||||||||||||| || ||||||| || | |||||||||||||||||||||| | |||||||||||||||||    
T  18419193 ctgtaactatttcgctattagcccacttttcgctatcaacgaaattgcccagtgacagcataccctgttttatgttcttgc 18419113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 41875594 - 41875819
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtt 100  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41875594 ttaaggtaagggtgagactctctctcattgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtt 41875693  T
Q  101 ttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctat 200  Q
    || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||||||||    
T  41875694 tttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtttcctat 41875793  T
Q  201 caaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||| |||||||    
T  41875794 caaatttggggtttgggtggatgaaa 41875819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 9777153 - 9776931
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  9777153 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 9777054  T
Q  104 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaa 203  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||    
T  9777053 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattatgttaagaatcgatgttcagattgtagaataaacataggttaagtttcctatcaa 9776954  T
Q  204 atttggggtttgggtagatgaaa 226  Q
    ||||||||||||||| |||||||    
T  9776953 atttggggtttgggtggatgaaa 9776931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 37804074 - 37804299
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtt 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  37804074 ttaaggtaagggcgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagtagaaattgggaattgggggttaggtt 37804173  T
Q  101 ttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctat 200  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||| ||| ||||||||||    
T  37804174 tttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctat 37804273  T
Q  201 caaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||| |||||||    
T  37804274 caaatttggggtttgggtggatgaaa 37804299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 24594218 - 24594359
Alignment:
Q  154 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttttgggtgaaaattgtgc 24594317  T
Q  254 agaaatcgtaacagcaagggaaaaactcgctaggagttcgct 295  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24594318 agaaatcgtaacagcaagggaaaaactcgctaggagttcgct 24594359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 156 - 394
Target Start/End: Original strand, 36508901 - 36509139
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||||||| |||| ||    
T  36508901 aattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagatcaaatttgggttttttgggtgaaaaatgtgtag 36509000  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 355  Q
    |||||||||||| | ||||| |||||||||| ||||||||||| ||||| | | ||||||| ||||||||||||||| | ||||||| |||||| |||||    
T  36509001 aaatcgtaacagtaggggaagaactcgctagaagttcgctattggcgaatccctctgtaacaatttcgctattagctaacttttcgctattagcaaaatt 36509100  T
Q  356 gcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||| ||||||| ||| | |||||| ||||||||||||||    
T  36509101 gcctagtgacaacataccctgtttcatgttcttgcgtct 36509139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 194 - 394
Target Start/End: Original strand, 16604759 - 16604959
Alignment:
Q  194 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 293  Q
    ||||||||||||||| | |||| ||||||||||||||| |||| |||||||||| |||| ||||||||||| |||| |||||||||||| ||| ||||||    
T  16604759 ttcctatcaaatttgagatttgagtagatgaaatttggattttttgggtgaaaaatgtgaagaaatcgtaatagcaggggaaaaactcgatagaagttcg 16604858  T
Q  294 ctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtc 393  Q
    ||||| ||||||  | ||||||| || |||||||||||    |||||||||||||||||||||| ||||| |||||| | |||||| |||||||||||||    
T  16604859 ctattggcgaaatcctctgtaacaatctcgctattagcaagattttcgccattagcgaaattgcacagtggcagcataccctgtttcatgttcttgcgtc 16604958  T
Q  394 t 394  Q
    |    
T  16604959 t 16604959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 27868685 - 27868801
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27868685 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 27868784  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  27868785 ggtttgggtggatgaaa 27868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 24617174 - 24617278
Alignment:
Q  290 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttg 389  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24617174 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacagcattccttgttttatgttcttg 24617273  T
Q  390 cgtct 394  Q
    |||||    
T  24617274 cgtct 24617278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 24746433 - 24746537
Alignment:
Q  290 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttg 389  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24746433 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacagcattccttgttttatgttcttg 24746532  T
Q  390 cgtct 394  Q
    |||||    
T  24746533 cgtct 24746537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 33472674 - 33472790
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33472674 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 33472773  T
Q  210 ggtttgggtagatgaaa 226  Q
    | ||||||| |||||||    
T  33472774 gatttgggtggatgaaa 33472790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 7786229 - 7786090
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |  |||| |||||||||||||||||||||||||||||||    
T  7786229 aaggtaagggtgagactaactctcaatgataatggttatacaattctaattttggtttagcagggttccagttgaaattgggaattgggggttaggtttt 7786130  T
Q  103 gggagtatgattcttggattgaaaagtgtagaaaccatgaca 144  Q
      |||||||||| ||| ||| || ||||||||| ||||||||    
T  7786129 --gagtatgatttttgaattaaagagtgtagaatccatgaca 7786090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 24713405 - 24713509
Alignment:
Q  290 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttg 389  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||  |||||||||||||||    
T  24713405 ttcgcttttagcgaaactccctgtaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacaacattccttgttttatgttcttg 24713504  T
Q  390 cgtct 394  Q
    |||||    
T  24713505 cgtct 24713509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 26707423 - 26707296
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||| |  ||||||||||||||||||||||||| ||||||||||    
T  26707423 aaggtaagggtgagactaactctcaatggtaatggttatacaactctgattttggtttagcaaggttctagttgaaattgggaattgggagttaggtttt 26707324  T
Q  103 gggagtatgattcttggattgaaaagtgta 132  Q
      |||||||||| ||| ||| || ||||||    
T  26707323 --gagtatgatttttgaattaaatagtgta 26707296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 26977157 - 26977030
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||| |  ||||||||||||||||||||||||| ||||||||||    
T  26977157 aaggtaagggtgagactaactctcaatggtaatggttatacaactctgattttggtttagcaaggttctagttgaaattgggaattgggagttaggtttt 26977058  T
Q  103 gggagtatgattcttggattgaaaagtgta 132  Q
      |||||||||| ||| ||| || ||||||    
T  26977057 --gagtatgatttttgaattaaatagtgta 26977030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 22413015 - 22412930
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  |||||||||||||||||||||| | || |||||||||||||||||||||||| ||| ||||||||    
T  22413015 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgtttatgttgtagaataatcataggttaagttttctaacaaatttg 22412930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 17021914 - 17022010
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttgg-tttagaatagttctagttgaaattgggaattgggggttag 97  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||| |||||||| ||| |||||||||||| ||| ||||    
T  17021914 taaggtaagggtgagactatctctcaatagtaatggttgtataattctgattttggatttagcatagttctggttaaaattgggaatttgggtttag 17022010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 17011626 - 17011550
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  17011626 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 17011550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 265936 - 265860
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||| | |||||||||    
T  265936 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttggattgatgaaatt 265860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 21504037 - 21503953
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 236  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  21504037 taagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 21503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 21553390 - 21553541
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggtttagaatag--ttctagttgaaattgggaattgggggttagg 98  Q
    ||||||||||||||| ||| ||||||||| | || || |||||||||||||||||| ||||| |  |  |||| ||| |||||||||||||||  |||||    
T  21553390 taaggtaagggtgaggctaactctcaatggttatagtctatataattctgattttgttttagcaaggggttctggtt-aaattgggaattgggt-ttagg 21553487  T
Q  99 ttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |||||    | ||||| ||| ||||||||||||||||||||||||||||||||||    
T  21553488 ttttgatcat-tgatttttgaattgaaaagtgtagaaaccatgacaattgtgtta 21553541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 29448738 - 29448662
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | |||| || |||||||||    
T  29448738 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaatt 29448662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 30138244 - 30138295
Alignment:
Q  159 tgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  30138244 tgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttggg 30138295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 21398956 - 21399029
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 229  Q
    ||||||||||||||| ||||||||| ||||||   ||||| |||| ||||||||| ||||||||||||| ||||    
T  21398956 aattgatgttcaggttgtagaataaacataggaagagttttctataaaatttgggatttgggtagatgagattt 21399029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 17875952 - 17875897
Alignment:
Q  155 gaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||| |||||||||  |||||| | ||||| |||||||||||||    
T  17875952 gaattgatgttcaggttgtagaataacaataggtgatgtttcttatcaaatttggg 17875897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 36461095 - 36461034
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  36461095 taaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 36461034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 17813533 - 17813473
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataat-ggttatataa-ttctgattttggttta 61  Q
    |||||||||||||||||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  17813533 aaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgattta 17813473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 18407943 - 18407971
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  18407943 ttaaggtaagggtgagactatctctcaat 18407971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 19512442 - 19512414
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  19512442 ttaaggtaagggtgagactatctctcaat 19512414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 20313169 - 20313089
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 236  Q
    |||||||||||| ||  |||||||| ||||| || ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  20313169 aattgatgttcaagttatagaataaacatagattgagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 20313089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 23111199 - 23111227
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  23111199 ttaaggtaagggtgagactatctctcaat 23111227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 28370054 - 28370082
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  28370054 ttaaggtaagggtgagactatctctcaat 28370082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 110 - 394
Target Start/End: Original strand, 22130136 - 22130420
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22130136 tgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgg 22130235  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
    | ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22130236 gatttgggtagatgaaatttggtttttttgggtgaaaaatatgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 22130335  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||| | ||||||||||||||| |||||    
T  22130336 ctgtaactatttcgctattagctcaattttcgctatcagcgaaactgcccagtgacagcataccctgttttatgttcttacgtct 22130420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 41 - 394
Target Start/End: Original strand, 23194554 - 23194906
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaa-agtgtagaaacca 139  Q
    |||||||||||||||||||||   ||||||| ||  ||||| |||| | ||| ||||||||||    |  |||| |||||| |||| ||||| ||||||     
T  23194554 tataattctgattttggtttaacgtagttctggtaaaaatttggaaattgggtttaggttttgattcttagatttttggatggaaagagtgtggaaacct 23194653  T
Q  140 tgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctg 239  Q
    ||  |||  ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  23194654 tgtaaatgatgtta-gaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggtagatgaaatttggtttttttg 23194752  T
Q  240 ggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagtttt 339  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  23194753 ggtaaaaattctgcagaaatcgtaacagcaagggaaaaactcgctagtagttcgctattagcgaaact-cctgtaactatttcgctattagctcactttt 23194851  T
Q  340 cgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  23194852 cgccattagcgaaattgcccagtgacagcataccctgttttatgttcttgcgtct 23194906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 110 - 394
Target Start/End: Original strand, 45574130 - 45574407
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||| |||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  45574130 tgatttttgaattgaaaagtgcagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg- 45574228  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
          ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45574229 ------ggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 45574322  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  45574323 ctgtaactatttcgctattagctcacttttcgctatcagcgaaattgcccggtgacagcataccctgttttatgttcttgcgtct 45574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 156 - 394
Target Start/End: Original strand, 7052171 - 7052410
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 254  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||| ||||||    
T  7052171 aattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgca 7052270  T
Q  255 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 354  Q
    ||||||||||||| | |||||||||||||||| ||||||||||| ||||| | | ||||||| ||||||||||||||| | |||||||||||||||||||    
T  7052271 gaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaatcactctgtaacaatttcgctattagctaacttttcgccattagcgaaat 7052370  T
Q  355 tgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||| |||||||||||| | |||||||||||||||||||||    
T  7052371 tgcacagtgacagcatacactgttttatgttcttgcgtct 7052410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 297329 - 297181
Alignment:
Q  78 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  297329 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaa 297230  T
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  297229 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 297181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 24723618 - 24723758
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||| |||||||    
T  24723618 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtaaatgaaatttgggttttttgggtgaaaaatgtgcag 24723717  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgcta 296  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  24723718 aaatcgtaacagcaggggaaaaactcgctagaagttcgcta 24723758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 8306498 - 8306349
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||| |||||||||| |||||||    
T  8306498 aattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaattttggttttttgggtgaaaa-tgtgcag 8306400  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 306  Q
    |||||||||||| | |||||||||| ||||||||||||||||| |||||||    
T  8306399 aaatcgtaacagtaggggaaaaacttgctaggagttcgctattggcgaaac 8306349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 28313290 - 28313174
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||| |||||||   ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||     
T  28313290 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttga 28313191  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  28313190 ggtttgggtggatgaaa 28313174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 13880660 - 13880745
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13880660 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 13880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24476381 - 24476279
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaattgggggttaggt 99  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||| ||| |||| |    
T  24476381 ttaaggtaagggtgagactatctctcaataatgatggttatgtaattctgattttgggtttagcatagttctagtagaaattgggaatttgggtttagat 24476282  T
Q  100 ttt 102  Q
    |||    
T  24476281 ttt 24476279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 21526783 - 21526933
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggt 99  Q
    ||||||||||||||||| || ||||||||||| || ||  |||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  21526783 ttaaggtaagggtgagaataactctcaatgatgatagtg-tatacttctgattttggtttagcaatggttctagttgaaattgagaattgggggttaggt 21526881  T
Q  100 tttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |||  || ||||||| ||| ||| || |||| |||| ||||| |||| ||||||    
T  21526882 ttt--gattatgatttttgaattaaagagtgaagaatccatggcaatagtgtta 21526933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25091417 - 25091505
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaatt 88  Q
    ||||||||||||||||||||||||||||| |||| |||||| | ||||||||||| ||||||| ||||||||||| | |||||||||||    
T  25091417 ttaaggtaagggtgagactatctctcaataataacggttatgtgattctgattttgggtttagcatagttctagtagtaattgggaatt 25091505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 46197899 - 46197975
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  46197899 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 46197975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 17901960 - 17902032
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||    
T  17901960 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatgaaatt 17902032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 6834060 - 6833988
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||| ||| |||||||||    
T  6834060 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggattttggttgatgaaatt 6833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 38056853 - 38056893
Alignment:
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggt 218  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38056853 taatcataggttaagtttcctatcaaatttggggtttgggt 38056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 50001374 - 50001298
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||| ||| ||||||||||||||||| || ||||||| |||||||||    
T  50001374 taagaattgaagttcaggctgtagaataaacatatgttgagtttcctatcaaattttggatttgggttgatgaaatt 50001298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 21188191 - 21188281
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 247  Q
    ||||||||||||||| |||||||||  ||| || | ||||||||||||||||||| ||||||||| || |||| || |||| ||||||||||    
T  21188191 aattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatttgggtagttgtaattggggtttt-tgggtgaaaa 21188281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 8276170 - 8276218
Alignment:
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  8276170 taatcataggttaagtttcctatcaaatttggagttttggtggatgaaa 8276218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 29763806 - 29763862
Alignment:
Q  172 gtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  29763806 gtagaataaacataagttgagtttcctatcaaatttgggatttgggtggatgaaatt 29763862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 21239201 - 21239276
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 231  Q
    ||||| ||||||| | |||||||||||||||||  ||||| ||||||||||| || ||||||| ||||||| ||||    
T  21239201 aattggtgttcagtttgtagaataatcataggtagagttttctatcaaatttaggatttgggttgatgaaaattgg 21239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 10812867 - 10812920
Alignment:
Q  345 ttagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtctgttt 398  Q
    |||||||||||||  |||| ||||||||||||||| ||||||| ||||||||||    
T  10812867 ttagcgaaattgcatagtggcagcattctctgtttcatgttctcgcgtctgttt 10812920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 8686076 - 8686037
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttata 42  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  8686076 aaggtaagggtgagactaactctcaatggtaatggttata 8686037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 21180280 - 21180339
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttta 61  Q
    ||||||||||||||||||| ||||||||||| || | | ||| |||||||||||| ||||    
T  21180280 taaggtaagggtgagactaactctcaatgattatagatgtatgattctgattttgattta 21180339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 21986077 - 21986124
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaatt 88  Q
    |||||||||||||||||||||  |||||||| ||| ||||||||||||    
T  21986077 tataattctgattttggtttaacatagttctggttaaaattgggaatt 21986124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 20437023 - 20437051
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  20437023 ttaaggtaagggtgagactatctctcaat 20437051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 32651628 - 32651600
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  32651628 ttaaggtaagggtgagactatctctcaat 32651600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 121 - 393
Target Start/End: Complemental strand, 10025 - 9753
Alignment:
Q  121 ttgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 220  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  10025 ttgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtag 9926  T
Q  221 atgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatt 320  Q
    ||||||||||| |||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9925 atgaaatttgggttttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatt 9826  T
Q  321 tcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtc 393  Q
    |||||||||||||| ||||||| || ||||||||| | ||||||||||||   ||||||||||||||||||||    
T  9825 tcgctattagctcaattttcgctatcagcgaaatttctcagtgacagcataacctgttttatgttcttgcgtc 9753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 28288510 - 28288733
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28288510 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 28288609  T
Q  102 tgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatc 201  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||    
T  28288610 t-ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatc 28288708  T
Q  202 aaatttggggtttgggtagatgaaa 226  Q
    ||||||||||||||||| |||||||    
T  28288709 aaatttggggtttgggtggatgaaa 28288733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 12943180 - 12942955
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12943180 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtt 12943081  T
Q  101 ttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctat 200  Q
    || |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| | |||||||||  ||||||| ||||||||||    
T  12943080 tttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtttcctat 12942981  T
Q  201 caaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||| |||||||    
T  12942980 caaatttggggtttgggtggatgaaa 12942955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 194 - 394
Target Start/End: Complemental strand, 19234981 - 19234782
Alignment:
Q  194 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 293  Q
    ||||||||||||||||| |||| ||||||||||||||  |||| |||||||||| |||||||||||||||||| || |||||||||||||||| ||||||    
T  19234981 ttcctatcaaatttgggatttgagtagatgaaatttgagttttttgggtgaaaaatgtgcagaaatcgtaacaacaggggaaaaactcgctagaagttcg 19234882  T
Q  294 ctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtc 393  Q
    ||||| ||||||  | ||||||| ||||||| | |||| ||  ||||||||||||||||||||| |||||||| ||| | |||||| |||||||||||||    
T  19234881 ctattggcgaaatcctctgtaacaatttcgcaaatagc-catatttcgccattagcgaaattgcacagtgacaacataccctgtttcatgttcttgcgtc 19234783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 164 - 394
Target Start/End: Complemental strand, 35057430 - 35057201
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 262  Q
    ||||||| ||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||| |||| |||  |||||| ||    
T  35057430 ttcaggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggtagatgaaatttggatttt-tgggtgaaaaagtgtttagaaattgt 35057332  T
Q  263 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccag 361  Q
    |||||| |||| |||||||||||| ||||||||||| ||||||  | ||||||| ||||| ||| |||| ||| |||||||||||||| ||||||| |||    
T  35057331 aacagc-aggggaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcactaatagc-cagattttcgccattagcaaaattgcacag 35057234  T
Q  362 tgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||||| | |||||| ||||||||||||||    
T  35057233 tgacagcataccctgtttcatgttcttgcgtct 35057201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 13765288 - 13765172
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13765288 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 13765189  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  13765188 ggtttgggtggatgaaa 13765172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 23956804 - 23956688
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23956804 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 23956705  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  23956704 ggtttgggtggatgaaa 23956688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 31021842 - 31021948
Alignment:
Q  120 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 219  Q
    |||||||||||||||||| ||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31021842 attgaaaagtgtagaaactatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggta 31021941  T
Q  220 gatgaaa 226  Q
    |||||||    
T  31021942 gatgaaa 31021948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 9184999 - 9185150
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataa-ttctgattttggtttagaatagttctagttgaaatt-gggaattgggggttaggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||| || |||| | |||||||||    
T  9184999 aaggtaagggtgagactatctctcaatgataatggttatataatttctgattttggtttagcaaggttctagttgaaattaggaaattagaggttaggtt 9185098  T
Q  101 ttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    || ||||||||||| ||| ||| |||||||||||| |||||||| | ||||||    
T  9185099 tt-ggagtatgatttttgaattaaaaagtgtagaatccatgacattagtgtta 9185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 611728 - 611641
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  611728 gaaaagtgtagaaaccatgacaattgtgttaggaattaatgttcaggtggtagaataatcataggttaagtttcctaacaaatttggg 611641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 23225968 - 23226066
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23225968 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 164 - 398
Target Start/End: Complemental strand, 13285634 - 13285401
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 262  Q
    ||||||| ||||||||||| || |||||||||||||||||||| ||| |||||   |||||||||||| |||| |||| | |||| |||| |||||||||    
T  13285634 ttcaggttgtagaataatcttaagttaagtttcctatcaaattagggatttggaatgatgaaatttgggtttt-tgggcgaaaaagtgtgtagaaatcgt 13285536  T
Q  263 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccag 361  Q
    |||||  || | |||||||||||| |||| |||||| ||||||  | ||||||| ||||||| | |||  ||| |||||||||||||||||||||| ||     
T  13285535 aacag-tagcggaaaactcgctagaagtttgctattggcgaaatcctctgtaacaatttcgcgaatag-acagattttcgccattagcgaaattgcacaa 13285438  T
Q  362 tgacagcattctctgttttatgttcttgcgtctgttt 398  Q
    ||||| ||| |  ||||| ||||||||||||||||||    
T  13285437 tgacatcataccatgtttcatgttcttgcgtctgttt 13285401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 18138596 - 18138497
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctga-ttttggtttagaatagttctagttgaaattgggaattgggggttaggttt 101  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||| ||||||||||||    
T  18138596 aaggtaaaggtgagactatctctcaatgataatggttatataattctgatttttggtttagcatagttccagttgaaattgagaatt-ggggttaggttt 18138498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 20556156 - 20556243
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  20556156 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 20556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 25619023 - 25619106
Alignment:
Q  125 aaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25619023 aaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 25619106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 23415846 - 23415728
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||| |||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  23415846 tgatttttgaattgaaaagcgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 23415747  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | ||||||| |||||||||    
T  23415746 gatttgggttgatgaaatt 23415728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 14978665 - 14978739
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcc 197  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14978665 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcc 14978739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 27557604 - 27557486
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| ||||||||||||||||||||    ||||||||||| |||||| |||||||| ||||||||| |||||||| ||||| |||||||||||||    
T  27557604 tgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaataattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgg 27557505  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | |||| || |||||||||    
T  27557504 gatttgagtcgatgaaatt 27557486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 15891723 - 15891799
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||| ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15891723 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 15891799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 15900808 - 15900884
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||| ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15900808 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 15900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 29045158 - 29045086
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||||||||||||| |||||||||||||||||  ||||| |||||||||||||| |||| || |||||||||    
T  29045158 aattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgagttgatgaaatt 29045086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 1588794 - 1588649
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggttta--gaatagttctagttgaaattgggaattgggggttagg 98  Q
    ||||||||||||||||||| ||||||||||| || || |||||||||||||| ||| ||||   ||  ||||||||| || |||||| ||| || |||||    
T  1588794 taaggtaagggtgagactaactctcaatgattatagtctatataattctgatgttgatttaacaaagggttctagtt-aatttgggatttgaggtttagg 1588696  T
Q  99 ttttgggagtat-gattcttggattgaaaagtgtagaaaccatgacaat 146  Q
    ||||  || ||| |||| ||| |||||||||||||||||||||||||||    
T  1588695 tttt--gattatagatttttgaattgaaaagtgtagaaaccatgacaat 1588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21470826 - 21470738
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaatt 88  Q
    ||||||||| ||||||||||||| ||||   ||||| |||||||||| ||||||| ||||||| |||||||| || |||||||||||||    
T  21470826 ttaaggtaatggtgagactatctttcaacattaatgattatataattttgattttgggtttagcatagttctggtagaaattgggaatt 21470738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21477326 - 21477238
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaatt 88  Q
    ||||||||||||||||||||||| ||||   ||||| |||||||||||||||||| ||||||||||  || | || |||||||||||||    
T  21477326 ttaaggtaagggtgagactatctttcaacattaatgattatataattctgattttgggtttagaatgattatggtagaaattgggaatt 21477238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25773605 - 25773516
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt--ggtttagaatagttctagttgaaattgggaatt 88  Q
    |||||||||| |||||||||||| ||||   ||||| |||||||| |||||||||  ||||||| |||||||| || |||||||||||||    
T  25773605 ttaaggtaagagtgagactatctttcaacattaatgattatataagtctgatttttgggtttagcatagttctggtagaaattgggaatt 25773516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 15173607 - 15173683
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| ||||||   |||| |||| |||||||| |||||||||||||||||||| ||||| | |||||||||    
T  15173607 taagaattgaagttcagcctgtaggataaacataggttgagtttcctatcaaatttgggatttggattgatgaaatt 15173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 19825667 - 19825715
Alignment:
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  19825667 taatcataggttaagtttcctatcaaatttggagtttaggtggatgaaa 19825715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 5833817 - 5833863
Alignment:
Q  162 tgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  5833817 tgttcaggttgtagaataatcatatgttaagtgtcctatcaaatttg 5833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 18585577 - 18585519
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||| |||||||||  ||| || | ||||| |||||||||||||    
T  18585577 taagaattgatgttcaggttgtagaataacaatatgtgatgtttcttatcaaatttggg 18585519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 25348543 - 25348509
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataat 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  25348543 ttaaggtaagggtgagactatctctcaataataat 25348509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 1254883 - 1254822
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  1254883 taaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 1254822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 4477913 - 4477885
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  4477913 ttaaggtaagggtgagactatctctcaat 4477885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 9187551 - 9187523
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  9187551 ttaaggtaagggtgagactatctctcaat 9187523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 14993674 - 14993611
Alignment:
Q  183 ataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 247  Q
    |||||| | ||||||| ||||||||||| ||||||||| ||||||| || |||| ||||||||||    
T  14993674 ataggtaatgtttcctgtcaaatttgggatttgggtagttgaaattggggtttt-tgggtgaaaa 14993611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 23839254 - 23839226
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  23839254 ttaaggtaagggtgagactatctctcaat 23839226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 123 - 390
Target Start/End: Original strand, 174232 - 174499
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  174232 gaaaagtgtagaaaccatgacaattgtgttaagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagatttgggtagat 174331  T
Q  223 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 322  Q
    |||||||||||||| | |||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| || |||||| |||||    
T  174332 gaaatttggtttttttaggtgaaaaatgtgtagaaatcgtaacaacaacggaaaaactcgctaggagttcgctattggcgaaaccccttgtaacaatttc 174431  T
Q  323 gctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgc 390  Q
    |||||||||| | |||||||| ||||||||||||| |||||||||||| | |||||||||||||||||    
T  174432 gctattagctaacttttcgcctttagcgaaattgctcagtgacagcataccctgttttatgttcttgc 174499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 182049 - 182192
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||    
T  182049 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaaaggttctagttgaaattgggaagtgggggttaggttt 182148  T
Q  102 tgggagtatga-ttcttggattgaaaagtgtagaaaccatgacaat 146  Q
    |  || ||||| || ||| ||| |||||||||||| ||||| ||||    
T  182149 t--gattatgattttttgaattaaaaagtgtagaatccatggcaat 182192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 1e-91; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 110 - 394
Target Start/End: Original strand, 25483552 - 25483829
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  25483552 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttgg 25483651  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
    |        |||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25483652 ga-------agatgaaatttgttttttttgggtgaaaaatgtgcagaaatggtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 25483744  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    || ||||||||| |||||||||||| ||||||| || |||||||||||| ||||||||||| | || ||||||||||||||||||    
T  25483745 ctttaactattttgctattagctcacttttcgctatcagcgaaattgcctagtgacagcataccctattttatgttcttgcgtct 25483829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 163 - 394
Target Start/End: Original strand, 36732649 - 36732879
Alignment:
Q  163 gttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgt 262  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||| ||||||||||||||    
T  36732649 gttcagattgtagaataatcataggtcaagtttcctatcaaatttgggatttgggtagacgaaatttgggttttttgggtgaaaaatgtgcagaaatcgt 36732748  T
Q  263 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagt 362  Q
    |||||| | ||||||||||||||| ||||||||||| ||||    | ||||||| ||||||||||||||| | |||||||||||||||||||||| ||||    
T  36732749 aacagc-atggaaaaactcgctagaagttcgctattggcgatttcctctgtaacaatttcgctattagctaaattttcgccattagcgaaattgcacagt 36732847  T
Q  363 gacagcattctctgttttatgttcttgcgtct 394  Q
    |||||||| |  ||||||||||||||||||||    
T  36732848 gacagcataccttgttttatgttcttgcgtct 36732879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 152 - 394
Target Start/End: Complemental strand, 22483678 - 22483443
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattg 250  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||  ||||||||       |||||||||||||| ||||| ||||||| || ||    
T  22483678 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttggg-------tagatgaaatttgggtttttttgggtgataaatg 22483586  T
Q  251 tgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcg 350  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| || |||  |  |||||| |||||||||||||||   ||||||||||||| |    
T  22483585 tgcagaaatcgtaacagcaagggaaaa-ctcgctagaagttcgctattggcaaaatcctatgtaacaatttcgctattagctagattttcgccattagtg 22483487  T
Q  351 aaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    ||||||| |||||||| ||| | |||||| |||||| |||||||    
T  22483486 aaattgcacagtgacaacataccctgtttcatgttcatgcgtct 22483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 8413859 - 8413975
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8413859 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 8413958  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  8413959 ggtttgggtggatgaaa 8413975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 19882889 - 19882773
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19882889 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 19882790  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  19882789 ggtttgggtggatgaaa 19882773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 22617684 - 22617542
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  22617684 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaagggttctagttgaaattgggaattgggggttaggttt 22617585  T
Q  102 tgggagtatgattcttggattgaaaagtgtagaaaccatgacaat 146  Q
    |  || | ||||| ||| ||| || ||||||||||||||| ||||    
T  22617584 t--gattttgatttttgaattaaagagtgtagaaaccatggcaat 22617542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 23661225 - 23661140
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23661225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23661140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 20455915 - 20455831
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 207  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20455915 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 17460331 - 17460416
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17460331 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttg 17460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 20463123 - 20463042
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaa 204  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  20463123 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaa 20463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 20460888 - 20460809
Alignment:
Q  128 gtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 207  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20460888 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20460809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 11775655 - 11775548
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  11775655 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttca---------ataatcataggttaagtttcctatcaaatttgg 11775565  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  11775564 ggtttgggtggatgaaa 11775548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 14397031 - 14397138
Alignment:
Q  120 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 219  Q
    |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || |||||||     
T  14397031 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattt-ggatttgggtt 14397129  T
Q  220 gatgaaatt 228  Q
    |||||||||    
T  14397130 gatgaaatt 14397138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 20455174 - 20455095
Alignment:
Q  128 gtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 207  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  20455174 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtgtcctaacaaattt 20455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 25657668 - 25657744
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  25657668 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 25657744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 16198734 - 16198658
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  16198734 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 16198658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 23478980 - 23478904
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||    
T  23478980 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttaggatttgggttgatgaaatt 23478904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 20387536 - 20387386
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag--aatagttctagttgaaattgggaattgggggttaggt 99  Q
    ||||||||||||||| ||| ||||||||  | |||||| |||||||||||||||| |||||  |   ||||| ||| || ||||||||| ||| ||||||    
T  20387536 taaggtaagggtgaggctaactctcaatagttatggttgtataattctgattttgatttagcaaggggttctggttaaatttgggaatt-gggattaggt 20387438  T
Q  100 tttgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    ||||  |   ||||| ||| ||||||||||||||||||||||||||| ||||||    
T  20387437 tttgtta--ttgatttttgaattgaaaagtgtagaaaccatgacaatagtgtta 20387386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 19880721 - 19880663
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  19880721 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 19880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 20879371 - 20879313
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||| |||||||||  |||||| | ||||||| |||||||||||    
T  20879371 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttggg 20879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 26454604 - 26454546
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||| | |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  26454604 taagaattaaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 26454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43113078 - 43113017
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag 62  Q
    |||||||||||||||| ||| ||||||||||| || ||| ||||||||||||| || |||||    
T  43113078 ttaaggtaagggtgaggctaactctcaatgattatagttttataattctgattatgttttag 43113017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 12037316 - 12037384
Alignment:
Q  150 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 218  Q
    ||||| ||||| |||| |||| |||||||||||||||||  ||  |||||||||||||||| |||||||    
T  12037316 gttaataattggtgtttaggttgtagaataatcataggtagagactcctatcaaatttgggatttgggt 12037384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 364913 - 364854
Alignment:
Q  4 aggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    ||||||||||||||||| ||||||||||| || | || |||||||||||||||| |||||    
T  364913 aggtaagggtgagactaactctcaatgattatagtttgtataattctgattttgatttag 364854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 20517218 - 20517268
Alignment:
Q  160 gatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  20517218 gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 20517268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 21299350 - 21299412
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttg 103  Q
    |||||||||||||||||||||   ||||||| || ||||||||||||| |||  |||||||||    
T  21299350 tataattctgattttggtttaacctagttctggtagaaattgggaatttgggtctaggttttg 21299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39364976 - 39364942
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataat 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  39364976 ttaaggtaagggtgagactatctctcaataataat 39364942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 14056564 - 14056597
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat 35  Q
    |||||||||||||||||||||||||||| |||||    
T  14056564 taaggtaagggtgagactatctctcaataataat 14056597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 22433615 - 22433676
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggt-tatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || || | |||||||||||||||| |||||    
T  22433615 taaggtaagggtgaggctaactctcaatgattatagtctgtataattctgattttgttttag 22433676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 25112031 - 25111998
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat 35  Q
    |||||||||||||||||||||||||||| |||||    
T  25112031 taaggtaagggtgagactatctctcaataataat 25111998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 18614328 - 18614300
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  18614328 ttaaggtaagggtgagactatctctcaat 18614300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 20494351 - 20494411
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  20494351 aaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 20494411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 21860535 - 21860595
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataat-ggttatataa-ttctgattttggttta 61  Q
    |||||||||||||||||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  21860535 aaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgattta 21860595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 23482052 - 23482080
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  23482052 ttaaggtaagggtgagactatctctcaat 23482080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 22 - 394
Target Start/End: Complemental strand, 9119 - 8754
Alignment:
Q  22 ctctcaatgataatggttatataattctgattttggtttagaatag--ttctagttgaaattgggaattgggggttaggttttgggagtatgattcttgg 119  Q
    ||||||||||| || ||| |||||||||||||||| ||||| |  |  |||| ||| || ||||||||||||  ||||||||||  | ||| | | |||     
T  9119 ctctcaatgattatagttgtataattctgattttgatttagcaaggggttctggttaaatttgggaattggga-ttaggttttg--attattaattttga 9023  T
Q  120 attgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 219  Q
     | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||       ||    
T  9022 ttagaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg-------ta 8930  T
Q  220 gatgaaatttggtttttctggg-tgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaacta 318  Q
    ||||||||||||||||| | || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |    
T  8929 gatgaaatttggttttttttggatgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaaccctctgtaacaa 8830  T
Q  319 tttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    |||||||||||||| |||||||||||||||||||||| |   |||||| ||| | |||||| ||||||||||||||    
T  8829 tttcgctattagctaagttttcgccattagcgaaattacatggtgacaacataccctgtttcatgttcttgcgtct 8754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 110 - 390
Target Start/End: Complemental strand, 2066 - 1786
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||| |||  |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  2066 tgatttttgaattgaaaagtgtagaaactatgctaattgtgttaagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgg 1967  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 309  Q
    | |||||||| ||||||||||| |||| ||| |||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| | |     
T  1966 gatttgggtatatgaaatttgggttttttggatgaaaaatgtgcagaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaatccct 1867  T
Q  310 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgc 390  Q
    ||||||| ||||||||||| ||| | ||||||| |||||||||||||| |||||||||||| | |||||||||||||||||    
T  1866 ctgtaacaatttcgctattcgctaacttttcgctattagcgaaattgctcagtgacagcataccctgttttatgttcttgc 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 123 - 394
Target Start/End: Complemental strand, 8092 - 7830
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 222  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||    
T  8092 gaaaagtgtagaaatcatggcaattgttttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg-------tagat 8000  T
Q  223 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 322  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | || |||| ||||     
T  7999 gaaatttggtttttttgggtgaaaat-gtgcagaaatcgtaacagcaagggaaaaactcgctaggagatcgctattggcgaaacactct-taacaatttt 7902  T
Q  323 gctattagctcagttttcgccattagcgaaattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    |||||| ||| | |||||||||||||| ||||||| |||||||||||| | |||||||||||||||||||||    
T  7901 gctattcgctaacttttcgccattagcaaaattgctcagtgacagcataccctgttttatgttcttgcgtct 7830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 152 - 394
Target Start/End: Complemental strand, 22020 - 21778
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgt 251  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||    
T  22020 taagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgt 21921  T
Q  252 gcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcga 351  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||| ||||||| |  |||||| ||||||||||||||| |  |||||| ||||||||    
T  21920 gcagaaatcgtaacagtgggggaaaaactcgctagaagttcgctattggcgaaaccctttgtaacaatttcgctattagctaaagtttcgctattagcga 21821  T
Q  352 aattgcccagtgacagcattctctgttttatgttcttgcgtct 394  Q
    |||||  |||||||||||| | || ||||||||||||||||||    
T  21820 aattgtacagtgacagcataccctattttatgttcttgcgtct 21778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 36562 - 36502
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||||||  ||  |||| || ||||||||||||| ||| ||||||||    
T  36562 tataattctgattttggtttaacatgtttctggtagaaattgggaatttgggtttaggttt 36502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 162 - 394
Target Start/End: Original strand, 106325 - 106558
Alignment:
Q  162 tgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgcagaaatc 260  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||  || |||||||||||||||| ||||| | |||||||| ||| ||||||||    
T  106325 tgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttgggagttcggtagatgaaatttgggtttttttaggtgaaaaatgttcagaaatc 106424  T
Q  261 gtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgccca 360  Q
    ||||||| | |||||||||||||||  ||||||||||| ||||| | | ||||||| ||||||||||| ||| | ||||||| |||||||||||||| ||    
T  106425 gtaacagtaggggaaaaactcgctattagttcgctattggcgaatccctctgtaacaatttcgctattggctaacttttcgctattagcgaaattgcaca 106524  T
Q  361 gtgacagcattctctgttttatgttcttgcgtct 394  Q
    |||||| |||   |||||||||||||||||||||    
T  106525 gtgacaacataacctgttttatgttcttgcgtct 106558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 152 - 389
Target Start/End: Original strand, 8951 - 9181
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgt 251  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||||||||  ||||||       |||||||||||||||| |||| |||||||||| | |    
T  8951 taagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttg-------ggtagatgaaatttgggttttttgggtgaaaaatat 9043  T
Q  252 gcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcga 351  Q
    ||| |||||||||| ||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||||||||| | ||||| ||||||||||    
T  9044 gcataaatcgtaactgcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattagctaacttttcaccattagcga 9143  T
Q  352 aattgcccagtgacagcattctctgttttatgttcttg 389  Q
    |||||| |||||||||||| | ||||||||||||||||    
T  9144 aattgcacagtgacagcataccctgttttatgttcttg 9181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 111; Significance: 7e-56; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 385208 - 385070
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  385208 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattggggattaggtttt 385109  T
Q  103 gggagtatgattcttggattgaaaa-gtgtagaaaccat 140  Q
     ||||||||||| |||||||||||| ||||||| |||||    
T  385108 tggagtatgatttttggattgaaaaggtgtagagaccat 385070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 66237 - 66308
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| |||| || |||||||||    
T  66237 aattggtgttcaggttgtagaataatcataggtagagttt-ctatcaaatttgggatttgagttgatgaaatt 66308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 116952 - 116924
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  116952 ttaaggtaagggtgagactatctctcaat 116924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 110 - 262
Target Start/End: Original strand, 39923 - 40075
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39923 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgg 40022  T
Q  210 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgt 262  Q
    | |||||||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  40023 gatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcagaagtcgt 40075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 315
Target Start/End: Complemental strand, 21434 - 21275
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 255  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||    
T  21434 aattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgggtatatgaaatttggtttttttgggtgaaaaatgtgcag 21335  T
Q  256 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaa 315  Q
    |||||||||||  | |||||||||||||||| ||||||||||| || |||| | ||||||    
T  21334 aaatcgtaacaataggggaaaaactcgctagaagttcgctattggcaaaaccctctgtaa 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 169381 - 169265
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  169381 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 169282  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  169281 ggtttgggtggatgaaa 169265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 176734 - 176618
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  176734 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 176635  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  176634 ggtttgggtggatgaaa 176618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 2219 - 2305
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  2219 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttgg 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 1081 - 960
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1081 tgatttttgaattgaaaagtgtagaaaccatagaaattgtgttaagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttgg 982  T
Q  210 ggtttgggtagatgaaatttgg 231  Q
    | ||||||| | ||||| ||||    
T  981 gatttgggttggtgaaaattgg 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 7121 - 7237
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||||  ||||||||| |||||||| |||||||||||||||||||    
T  7121 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 7220  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  7221 ggtttgggtggatgaaa 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 3905 - 3789
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||||| || |||||| |||||||| |||||||||||||||||||    
T  3905 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttgg 3806  T
Q  210 ggtttgggtagatgaaa 226  Q
    ||||||||| |||||||    
T  3805 ggtttgggtggatgaaa 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 72365 - 72278
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  72365 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 72278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 70007 - 70083
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  |||||| ||  ||||||| |||||||||||||||||||| ||||||| |||||||||    
T  70007 taagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 70083  T

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Target: scaffold0106 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 21911 - 21817
Alignment:
Q  124 aaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 218  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  21911 aaaagtgtagaaaccatggcaattgtgttaacaattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggatttgggt 21817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 31449 - 31580
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttag-aatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  31449 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaagggttctagttgaaattgggaattgggggttaggttt 31548  T
Q  102 tgggagtatgattcttggattgaaaagtgtagaa 135  Q
    |  || ||||||| ||| ||| || |||||||||    
T  31549 t--gattatgatttttgaattaaagagtgtagaa 31580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 18535 - 18419
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  18535 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 18436  T
Q  210 ggtttgggtagatgaaa 226  Q
    | ||||||| |||||||    
T  18435 gatttgggttgatgaaa 18419  T

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Target: scaffold0086 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 164 - 366
Target Start/End: Original strand, 35652 - 35845
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 262  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||         |||||| |||| |||| |||||||||    
T  35652 ttcaggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggtagataaaatt---------tgggtgaaaaaatgtgtagaaatcgt 35742  T
Q  263 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccag 361  Q
    |||||| |||  |||||||||||| ||||| ||||| ||||||  | ||||||| ||||||||||||| |||| ||||||||||||||||||||||  ||    
T  35743 aacagc-aggagaaaactcgctagaagttctctattggcgaaatcctctgtaacaatttcgctattag-tcagattttcgccattagcgaaattgcatag 35840  T

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Target: scaffold1439 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 1004 - 917
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  1004 gaaaagtgtagaaatcatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 2151 - 2236
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  2151 gaaaagtgtagaaaccatggtaattgtgttaagaactgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 2236  T

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Target: scaffold0290 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 1001 - 916
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  1001 gaaaagtgtagaaaccatggtaattgtgttaagagttgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 1174 - 1259
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  1174 gaaaagtgtagaaaccatggtaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 28446 - 28373
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 229  Q
    |||||||| |||||| ||||||||| ||||||   ||||| |||| ||||| ||| ||||||||||||| ||||    
T  28446 aattgatggtcaggttgtagaataaacataggaagagttttctataaaattagggatttgggtagatgagattt 28373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 12978 - 12891
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||    
T  12978 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagttttctaacaaatttggg 12891  T

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Target: scaffold0480 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1521 - 1419
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaattgggggttaggt 99  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||  ||||||||||| ||||||||||||| ||| |||| |    
T  1521 ttaaggtaagggtgagactatctctcaatgataatggttatgttattctgattttgggtttaacatagttctagtagaaattgggaatttgggtttagat 1422  T
Q  100 ttt 102  Q
    |||    
T  1421 ttt 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 32084 - 31967
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||| |||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  32084 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttgg 31986  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | ||||||| |||||||||    
T  31985 gatttgggttgatgaaatt 31967  T

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Target: scaffold0293 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 19410 - 19528
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| |||| ||| |||||||||||||||||||    
T  19410 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgg 19509  T
Q  210 ggtttgggtagatgaaatt 228  Q
    | | || || |||||||||    
T  19510 gatatgagttgatgaaatt 19528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 23247 - 23332
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 208  Q
    ||||| |||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||    
T  23247 gaaaaatgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacgaatttg 23332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 82920 - 82839
Alignment:
Q  129 tgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||||| ||| ||||||||||    
T  82920 tgtagaaaccatgataattgtgttaagaattgatgttcaagttgtagaataatcatacgttaagttttctaacaaatttggg 82839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 2708 - 2612
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtg 252  Q
    ||||| ||||||| | || ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||| ||||    
T  2708 aattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttgggatttgagtagatgaaatttgggttttttgggtgaaaaatgtg 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 42225 - 42153
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttt 195  Q
    |||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  42225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagttt 42153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 1835 - 1759
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||    
T  1835 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattttggatttgggttgatgaaatt 1759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 189779 - 189630
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttt-agaatagttctagttgaaattgggaattgggggttaggttt 101  Q
    |||||||||||||||| | |||||||||||||| ||| |||| ||||||||||| ||| | ||  |||||||||||| |||| || ||||||||||||||    
T  189779 aaggtaagggtgagaccaactctcaatgataatagttctatacttctgattttgatttaacaagggttctagttgaatttggaaaatgggggttaggttt 189680  T
Q  102 tgggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgtta 153  Q
    |  || ||||||| ||| |||||| |||||| |||||||| |||| ||||||    
T  189679 t--gattatgatttttgaattgaagagtgtacaaaccatggcaatggtgtta 189630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 14740 - 14814
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  14740 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 23798 - 23872
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  23798 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 21931 - 22007
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  21931 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 22007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 71555 - 71510
Alignment:
Q  43 taattctgattttggtttagaatagttctagttgaaattgggaatt 88  Q
    |||||||||||||||||||  |||||||| ||| ||||||||||||    
T  71555 taattctgattttggtttaacatagttctggttaaaattgggaatt 71510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 42613 - 42514
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 209  Q
    ||||| ||| |||||||||||||||||||||   ||| |||||||||||||| |||||||  ||||||||| | |||||| |||||||||||||||||||    
T  42613 tgatttttgaattgaaaagtgtagaaaccattgaaatagtgttaagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttgg 42514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 163262 - 163175
Alignment:
Q  123 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||  |||||| | ||| | |||||||||||||    
T  163262 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataacaataggtgatgttccttatcaaatttggg 163175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 20995 - 20919
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  20995 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 20919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 29370 - 29446
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  29370 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 29446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 5508 - 5421
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttgg-tttagaatagttctagttgaaattgggaatt 88  Q
    |||||||||||||||||||||| |||||  |||||| ||||| ||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  5508 taaggtaagggtgagactatctttcaatagtaatgggtatatgattctgattttggatttagcatagttctggttaaaattgggaatt 5421  T

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Target: scaffold0462 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 1156 - 1089
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 231  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  1156 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgg 1089  T

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Target: scaffold0462; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 6662 - 6595
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 231  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  6662 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgg 6595  T

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Target: scaffold0462; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 11121 - 11045
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| ||||  || |||||||||||||||||||| ||| ||| |||||||||    
T  11121 taagaattgaagttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttggttgatgaaatt 11045  T

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Target: scaffold0439 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 12139 - 12081
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  12139 taagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggg 12081  T

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Target: scaffold0220 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 13820 - 13772
Alignment:
Q  178 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13820 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 13772  T

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Target: scaffold0213 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 19001 - 18934
Alignment:
Q  164 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 231  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  | || |||||||||||||||||    
T  19001 ttcaggttgtagaataatcatatgttaagtttcctatcaaatttttgattagggtagatgaaatttgg 18934  T

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Target: scaffold0436 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 8858 - 8782
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | |||| || |||||||||    
T  8858 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaatt 8782  T

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Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 28608 - 28536
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 228  Q
    ||||||||||||||| |||||||||| ||| || | ||||||| ||||||||||| ||||||||| |||||||    
T  28608 aattgatgttcaggttgtagaataataatacgtaatgtttcctgtcaaatttgggatttgggtagttgaaatt 28536  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 18824 - 18882
Alignment:
Q  180 atcataggttaagtttcctatcaaatttggggtttgggtagatgaaa--tttggttttt 236  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  18824 atcataggttaagtttcctatcaaatttgtggtttgggtggatgaaaattttggttttt 18882  T

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Target: scaffold0207 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 9708 - 9569
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaatgataatggttatataattctgatttt-ggtttagaatagttctagttgaaattgggaattgggggttaggt 99  Q
    ||||||||||||||||| |||||||||||  | |||| ||| ||||||||||||| ||||||  |||||||| || ||| ||||||||| ||| |||| |    
T  9708 ttaaggtaagggtgagattatctctcaatagtgatggctatgtaattctgattttgggtttaacatagttctggtagaatttgggaatttgggtttagat 9609  T
Q  100 tttgggagtatgattcttggattgaaa-agtgtagaaacc 138  Q
    |||     | ||||| ||||||||||| ||||||||||||    
T  9608 tttaattctttgatttttggattgaaagagtgtagaaacc 9569  T

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Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 35390 - 35319
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatg 223  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||  |||||||| ||| ||| ||||    
T  35390 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttgggatttaggttgatg 35319  T

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Target: scaffold0278 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 23829 - 23887
Alignment:
Q  110 tgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcag 168  Q
    ||||| ||| |||||||||||||||||||||   |||||||||||||||||||||||||    
T  23829 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcag 23887  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 5774 - 5836
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 218  Q
    ||||||||||||||| ||||||||| |||||||| ||||||| ||  |||||||| |||||||    
T  5774 aattgatgttcaggttgtagaataaacataggttgagtttcccattgaatttgggatttgggt 5836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 3381 - 3342
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataatggttata 42  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  3381 aaggtaagggtgagactaactctcaatggtaatggttata 3342  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 2134 - 2075
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttg 215  Q
    ||||| ||||||||| |||||||||||||||||  | ||| |||||||||||||| ||||    
T  2134 aattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttgggatttg 2075  T

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Target: scaffold0371 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 8575 - 8516
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggttta 61  Q
    ||||||||||||||| ||| ||||||||||| || | | |||||||||||||||| ||||    
T  8575 taaggtaagggtgaggctaactctcaatgattatagatgtataattctgattttgattta 8516  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 38600 - 38690
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 247  Q
    ||||||||||||||| || ||||||  |||||| | ||||| | ||||||||| | ||||||||| ||||||| || |||| ||||||||||    
T  38600 aattgatgttcaggttgtggaataacaataggtaatgtttcttgtcaaatttgagatttgggtagttgaaattggggtttt-tgggtgaaaa 38690  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 6948 - 7006
Alignment:
Q  152 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||||||||||| |||||||||  ||| || | ||||| |||||||||||||    
T  6948 taagaattgatgttcaggttgtagaataacaatatgtgatgtttcttatcaaatttggg 7006  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 8735 - 8673
Alignment:
Q  156 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 218  Q
    ||||| ||||||||| | ||| |||||||||||  ||||| |||||||||||||| |||||||    
T  8735 aattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttgggatttgggt 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 19022 - 19072
Alignment:
Q  160 gatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 210  Q
    ||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  19022 gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 19072  T

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Target: scaffold0599 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 1123 - 1062
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    ||||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  1123 taaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 1062  T

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Target: scaffold0256 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 2005 - 2042
Alignment:
Q  162 tgttcaggtggtagaataatcataggttaagtttccta 199  Q
    |||||| || ||||||||||||||||||||||||||||    
T  2005 tgttcatgttgtagaataatcataggttaagtttccta 2042  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 52052 - 51991
Alignment:
Q  2 taaggtaagggtgagactatctctcaatgataat-ggttatataa-ttctgattttggttta 61  Q
    ||||||||||||||||||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  52052 taaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgattta 51991  T

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Target: scaffold0635 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 8008 - 7948
Alignment:
Q  3 aaggtaagggtgagactatctctcaatgataat-ggttatataattctgattttggtttag 62  Q
    |||||||||||||| ||| ||||||||||| || | || |||||||||||||||| |||||    
T  8008 aaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttag 7948  T

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Target: scaffold0461 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 7 - 35
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  7 ttaaggtaagggtgagactatctctcaat 35  T

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Target: scaffold0222 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 16876 - 16848
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  16876 ttaaggtaagggtgagactatctctcaat 16848  T

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Target: scaffold0146 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 13688 - 13660
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  13688 ttaaggtaagggtgagactatctctcaat 13660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 42111 - 42167
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 97  Q
    ||||||||||| |||||||||  |||||||| ||| |||||||||||| ||| ||||    
T  42111 tataattctgagtttggtttaacatagttctggttaaaattgggaatttgggtttag 42167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 52806 - 52862
Alignment:
Q  41 tataattctgattttggtttagaatagttctagttgaaattgggaattgggggttag 97  Q
    ||||||||||| |||||||||  |||||||| ||| |||||||||||| ||| ||||    
T  52806 tataattctgagtttggtttaacatagttctggttaaaattgggaatttgggtttag 52862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 101927 - 101955
Alignment:
Q  1 ttaaggtaagggtgagactatctctcaat 29  Q
    |||||||||||||||||||||||||||||    
T  101927 ttaaggtaagggtgagactatctctcaat 101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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