View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5931_low_43 (Length: 347)
Name: NF5931_low_43
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5931_low_43 |
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Alignment Details
Target: chr5 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 18 - 332
Target Start/End: Complemental strand, 17151490 - 17151176
Alignment:
| Q |
18 |
gatataagtatcctttcgtgataaaaatatgtaacaaacagattaaaattcaagttttaaatatagtttctatatagaccgttagaaaaattagggttgt |
117 |
Q |
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| T |
17151490 |
gatataagtatcctttcgtgataaaaatatgtaacaaacagattaaaattcaagttttaaatatagtttctatatagaccgttagaaaaattagggtggt |
17151391 |
T |
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| Q |
118 |
actttattttgaggtcccatgaaaggatgtggcatggaatcatttatttgggcagacatgaacttcagcaaaaataggctttaaaaagaacattcaatca |
217 |
Q |
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| T |
17151390 |
actttattttgaggtcccatgaaaggatgtggcatggaatcatttatttgggcagacatgaacttcagcaaaaataggctttaaaaagaacattcaatca |
17151291 |
T |
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| Q |
218 |
agaccacctacccaattcaatcatataattctctccattcctcctctaagctctgacaaattttatgaaagtaacctgtaaaagtggccaatcatcacat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17151290 |
agaccacctacccaattcaatcatataattctctccattcctcctctaagctctgacaaattttatgaaagtaacctgtaaaagtggccaatcatcacat |
17151191 |
T |
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| Q |
318 |
ccagctaatactctt |
332 |
Q |
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||||||||||||||| |
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| T |
17151190 |
ccagctaatactctt |
17151176 |
T |
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