View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5931_low_49 (Length: 315)

Name: NF5931_low_49
Description: NF5931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5931_low_49
NF5931_low_49
[»] chr6 (28 HSPs)
chr6 (17-237)||(23606959-23607180)
chr6 (29-237)||(16688535-16688744)
chr6 (23-237)||(19573604-19573821)
chr6 (22-237)||(20090415-20090631)
chr6 (29-238)||(22467515-22467725)
chr6 (40-237)||(8668070-8668267)
chr6 (40-225)||(19011614-19011801)
chr6 (23-238)||(11231281-11231497)
chr6 (23-238)||(19577223-19577439)
chr6 (40-238)||(8650040-8650235)
chr6 (17-159)||(19008533-19008675)
chr6 (17-192)||(18929399-18929575)
chr6 (40-157)||(19019315-19019432)
chr6 (27-192)||(17996834-17997001)
chr6 (29-150)||(16666257-16666379)
chr6 (26-192)||(25970102-25970271)
chr6 (26-192)||(25974542-25974711)
chr6 (27-136)||(13727716-13727826)
chr6 (128-192)||(13727252-13727317)
chr6 (180-237)||(26460037-26460094)
chr6 (180-239)||(4279450-4279509)
chr6 (180-238)||(4282733-4282791)
chr6 (180-238)||(11694869-11694927)
chr6 (180-238)||(34336073-34336131)
chr6 (115-150)||(12697257-12697292)
chr6 (77-150)||(11091908-11091981)
chr6 (136-192)||(13728606-13728663)
chr6 (128-176)||(13795519-13795568)
[»] chr8 (41 HSPs)
chr8 (17-237)||(21834790-21835011)
chr8 (29-237)||(14676549-14676758)
chr8 (29-238)||(14673343-14673552)
chr8 (54-238)||(21408365-21408549)
chr8 (54-238)||(21802857-21803041)
chr8 (30-225)||(31708885-31709081)
chr8 (27-225)||(31711102-31711301)
chr8 (23-238)||(14369702-14369911)
chr8 (23-238)||(14370253-14370462)
chr8 (23-238)||(20134878-20135095)
chr8 (54-238)||(20131753-20131940)
chr8 (40-237)||(3303148-3303345)
chr8 (23-238)||(14366113-14366322)
chr8 (29-226)||(36281244-36281442)
chr8 (40-238)||(3300082-3300280)
chr8 (30-176)||(21938590-21938737)
chr8 (22-140)||(21936072-21936191)
chr8 (42-226)||(17007778-17007965)
chr8 (42-226)||(17540985-17541172)
chr8 (53-226)||(2321-2495)
chr8 (39-226)||(753320-753508)
chr8 (42-226)||(17526566-17526753)
chr8 (242-302)||(14714522-14714582)
chr8 (111-211)||(44754245-44754345)
chr8 (47-226)||(37718103-37718285)
chr8 (47-207)||(16077780-16077941)
chr8 (52-226)||(16083467-16083643)
chr8 (52-226)||(16084874-16085050)
chr8 (52-226)||(16086281-16086457)
chr8 (52-226)||(16087688-16087864)
chr8 (181-225)||(21945924-21945968)
chr8 (180-238)||(18973320-18973378)
chr8 (180-238)||(25502708-25502766)
chr8 (180-238)||(26908483-26908541)
chr8 (180-237)||(18977835-18977892)
chr8 (180-237)||(25560310-25560367)
chr8 (180-237)||(26905214-26905271)
chr8 (40-193)||(36602524-36602678)
chr8 (40-193)||(36598332-36598486)
chr8 (178-226)||(32231449-32231498)
chr8 (192-238)||(25548052-25548098)
[»] chr4 (20 HSPs)
chr4 (21-238)||(10968706-10968923)
chr4 (21-238)||(10754937-10755154)
chr4 (21-237)||(10757214-10757430)
chr4 (21-237)||(10970385-10970601)
chr4 (22-226)||(23882330-23882537)
chr4 (16-226)||(27789015-27789229)
chr4 (30-226)||(23878690-23878890)
chr4 (52-226)||(30953168-30953345)
chr4 (40-226)||(7202741-7202929)
chr4 (130-226)||(22763078-22763176)
chr4 (127-226)||(22751797-22751898)
chr4 (129-226)||(28924663-28924763)
chr4 (115-227)||(12327891-12328008)
chr4 (180-240)||(726438-726498)
chr4 (180-238)||(722864-722922)
chr4 (118-226)||(36250884-36250994)
chr4 (242-282)||(50158077-50158117)
chr4 (39-226)||(20494564-20494755)
chr4 (176-226)||(28926777-28926828)
chr4 (180-237)||(29724643-29724700)
[»] chr3 (38 HSPs)
chr3 (21-237)||(8854057-8854273)
chr3 (21-225)||(94496-94702)
chr3 (16-237)||(17601653-17601877)
chr3 (49-237)||(26900539-26900727)
chr3 (43-238)||(16082663-16082860)
chr3 (49-238)||(18556645-18556835)
chr3 (43-237)||(16091839-16092035)
chr3 (16-238)||(17593645-17593870)
chr3 (54-225)||(103358-103531)
chr3 (16-226)||(8368205-8368418)
chr3 (21-238)||(8856903-8857111)
chr3 (44-226)||(15926673-15926858)
chr3 (49-238)||(26907147-26907331)
chr3 (43-226)||(14566211-14566395)
chr3 (43-226)||(14561027-14561211)
chr3 (54-240)||(10776810-10776996)
chr3 (43-192)||(10812992-10813143)
chr3 (22-194)||(38700143-38700317)
chr3 (44-238)||(14789662-14789859)
chr3 (107-238)||(15417785-15417916)
chr3 (46-238)||(19767616-19767811)
chr3 (43-192)||(10815893-10816039)
chr3 (47-226)||(12206649-12206830)
chr3 (52-214)||(14429821-14429984)
chr3 (39-226)||(12209061-12209250)
chr3 (52-212)||(14433306-14433467)
chr3 (180-226)||(54110948-54110995)
chr3 (180-230)||(5195580-5195630)
chr3 (180-237)||(33481011-33481068)
chr3 (180-238)||(2689138-2689196)
chr3 (180-238)||(33484800-33484858)
chr3 (180-237)||(2692813-2692870)
chr3 (180-237)||(19790105-19790162)
chr3 (162-230)||(20012431-20012499)
chr3 (192-239)||(19777222-19777269)
chr3 (179-230)||(20008610-20008661)
chr3 (191-237)||(11133947-11133993)
chr3 (193-238)||(11137180-11137225)
[»] scaffold0369 (1 HSPs)
scaffold0369 (27-225)||(7531-7730)
[»] chr1 (18 HSPs)
chr1 (16-238)||(19749484-19749706)
chr1 (16-237)||(19751710-19751931)
chr1 (40-238)||(15158020-15158218)
chr1 (21-225)||(12020180-12020386)
chr1 (40-231)||(15142601-15142792)
chr1 (22-225)||(20442480-20442685)
chr1 (36-225)||(20514355-20514546)
chr1 (21-225)||(24276784-24276990)
chr1 (21-225)||(24280897-24281103)
chr1 (28-225)||(18433168-18433364)
chr1 (30-238)||(20435185-20435384)
chr1 (43-237)||(36910420-36910610)
chr1 (39-219)||(20194837-20195020)
chr1 (159-226)||(33295686-33295754)
chr1 (192-238)||(546077-546123)
chr1 (192-238)||(555362-555408)
chr1 (192-238)||(19911091-19911137)
chr1 (192-238)||(19913752-19913798)
[»] scaffold0878 (1 HSPs)
scaffold0878 (27-225)||(4222-4421)
[»] scaffold0018 (1 HSPs)
scaffold0018 (27-225)||(194574-194773)
[»] chr2 (19 HSPs)
chr2 (20-237)||(29603722-29603941)
chr2 (40-237)||(7310827-7311024)
chr2 (40-237)||(45278932-45279129)
chr2 (27-225)||(4876762-4876961)
chr2 (40-237)||(5771849-5772045)
chr2 (40-206)||(45286231-45286397)
chr2 (40-237)||(26126026-26126223)
chr2 (16-238)||(23692699-23692922)
chr2 (16-238)||(23696486-23696709)
chr2 (27-192)||(3071586-3071753)
chr2 (40-108)||(26120693-26120761)
chr2 (127-237)||(7395020-7395133)
chr2 (180-238)||(8164787-8164845)
chr2 (180-238)||(8168720-8168778)
chr2 (52-226)||(26383947-26384125)
chr2 (180-238)||(8998178-8998236)
chr2 (141-237)||(41325812-41325909)
chr2 (180-237)||(9002102-9002159)
chr2 (125-212)||(2218544-2218632)
[»] scaffold0045 (1 HSPs)
scaffold0045 (28-238)||(78657-78867)
[»] chr7 (30 HSPs)
chr7 (16-238)||(23532453-23532676)
chr7 (21-225)||(11544703-11544908)
chr7 (21-225)||(11527298-11527503)
chr7 (23-238)||(44356976-44357193)
chr7 (37-214)||(15932250-15932428)
chr7 (54-238)||(44360128-44360315)
chr7 (27-192)||(11100124-11100291)
chr7 (16-139)||(23522322-23522445)
chr7 (22-203)||(43173402-43173584)
chr7 (52-226)||(9214540-9214715)
chr7 (47-226)||(18016850-18017032)
chr7 (134-225)||(23517841-23517934)
chr7 (52-226)||(6201929-6202106)
chr7 (130-227)||(11734943-11735044)
chr7 (180-238)||(12529369-12529427)
chr7 (180-238)||(12538420-12538478)
chr7 (57-205)||(9066367-9066516)
chr7 (180-237)||(21627496-21627553)
chr7 (180-237)||(37278662-37278719)
chr7 (40-226)||(30096662-30096850)
chr7 (180-238)||(15834932-15834990)
chr7 (180-237)||(15828438-15828495)
chr7 (114-226)||(6198717-6198832)
chr7 (180-238)||(362089-362147)
chr7 (180-226)||(37282861-37282907)
chr7 (68-157)||(30218049-30218138)
chr7 (192-239)||(5328170-5328217)
chr7 (180-238)||(357358-357416)
chr7 (77-151)||(27553181-27553255)
chr7 (192-237)||(37973372-37973417)
[»] scaffold1778 (1 HSPs)
scaffold1778 (34-238)||(911-1115)
[»] chr5 (22 HSPs)
chr5 (16-239)||(26857380-26857603)
chr5 (21-226)||(8460138-8460345)
chr5 (29-238)||(38836734-38836944)
chr5 (29-237)||(38840653-38840862)
chr5 (43-237)||(40936593-40936790)
chr5 (43-238)||(40933198-40933396)
chr5 (46-231)||(26863639-26863816)
chr5 (52-226)||(20680114-20680291)
chr5 (59-226)||(27073696-27073866)
chr5 (27-116)||(32965751-32965840)
chr5 (47-226)||(19049649-19049830)
chr5 (52-226)||(20675366-20675543)
chr5 (242-302)||(2260916-2260976)
chr5 (114-226)||(37256962-37257077)
chr5 (178-226)||(20675696-20675745)
chr5 (180-238)||(35415777-35415835)
chr5 (163-226)||(20671143-20671208)
chr5 (180-237)||(43041963-43042020)
chr5 (120-159)||(12722432-12722471)
chr5 (120-159)||(12783914-12783953)
chr5 (192-237)||(40569411-40569456)
chr5 (115-159)||(20817633-20817677)
[»] scaffold0264 (1 HSPs)
scaffold0264 (22-238)||(12948-13165)
[»] scaffold0202 (2 HSPs)
scaffold0202 (29-231)||(13808-14011)
scaffold0202 (29-237)||(10315-10524)
[»] scaffold0130 (2 HSPs)
scaffold0130 (29-243)||(14918-15133)
scaffold0130 (29-139)||(19021-19132)
[»] scaffold0320 (1 HSPs)
scaffold0320 (43-226)||(12018-12203)
[»] scaffold0023 (2 HSPs)
scaffold0023 (23-225)||(149857-150063)
scaffold0023 (23-225)||(146650-146856)
[»] scaffold0208 (1 HSPs)
scaffold0208 (21-225)||(1466-1672)
[»] scaffold1505 (1 HSPs)
scaffold1505 (40-237)||(365-562)
[»] scaffold0139 (1 HSPs)
scaffold0139 (27-225)||(2856-3056)
[»] scaffold0167 (1 HSPs)
scaffold0167 (43-226)||(10407-10592)
[»] scaffold0179 (2 HSPs)
scaffold0179 (32-226)||(27477-27673)
scaffold0179 (54-226)||(24840-25014)
[»] scaffold0074 (1 HSPs)
scaffold0074 (40-188)||(56481-56631)
[»] scaffold0037 (1 HSPs)
scaffold0037 (22-192)||(20527-20699)
[»] scaffold0071 (1 HSPs)
scaffold0071 (107-238)||(44322-44453)
[»] scaffold0123 (1 HSPs)
scaffold0123 (56-192)||(8733-8871)
[»] scaffold0076 (1 HSPs)
scaffold0076 (39-226)||(36862-37051)
[»] scaffold0022 (2 HSPs)
scaffold0022 (242-302)||(126487-126547)
scaffold0022 (242-276)||(126393-126427)
[»] scaffold0716 (1 HSPs)
scaffold0716 (57-226)||(2133-2307)
[»] scaffold0013 (4 HSPs)
scaffold0013 (127-226)||(133414-133514)
scaffold0013 (127-226)||(137943-138043)
scaffold0013 (130-226)||(135737-135834)
scaffold0013 (39-174)||(147418-147553)
[»] scaffold0888 (1 HSPs)
scaffold0888 (114-226)||(4133-4247)
[»] scaffold0012 (2 HSPs)
scaffold0012 (242-302)||(96724-96784)
scaffold0012 (242-282)||(96844-96884)
[»] scaffold0009 (1 HSPs)
scaffold0009 (40-226)||(96209-96397)
[»] scaffold0064 (1 HSPs)
scaffold0064 (166-226)||(25713-25775)
[»] scaffold0010 (1 HSPs)
scaffold0010 (180-238)||(245294-245352)
[»] scaffold0438 (1 HSPs)
scaffold0438 (52-222)||(3849-4022)
[»] scaffold0056 (1 HSPs)
scaffold0056 (163-237)||(19315-19390)
[»] scaffold0272 (1 HSPs)
scaffold0272 (185-229)||(5057-5101)


Alignment Details
Target: chr6 (Bit Score: 170; Significance: 3e-91; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 23607180 - 23606959
Alignment:
Q  17 atttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcca 116  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  23607180 atttctcatagcgccgccttactaacctctagaactttctagaaaccgcccaaaatacacaaatacccctattacttggagactaagcaaccaaaaccca 23607081  T
Q  117 agcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagta-aaaaccctagtatacgattcttaaccctagaatcctta 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  23607080 agcccatagaaggctataaatacctcccttgagaacactctcaggtatctaataatcagtaaaaaaccctagcatacgattcttaaccctagaatcctta 23606981  T
Q  216 ttgtactttttctgcatgtaca 237  Q
     ||||||||||||||| |||||    
T  23606980 ctgtactttttctgcaagtaca 23606959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 29 - 237
Target Start/End: Original strand, 16688535 - 16688744
Alignment:
Q  29 gccgccttacta-acctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    |||||||||||  ||||||| ||||||||||||||||||| ||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  16688535 gccgccttactggacctctaaaaccttctagaaaccgccctaaatacctaaatacccctattacttggagattaagcaaccaaaatccaagcccatagaa 16688634  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||  |||||||| || |||||||||||||||||||||||||||||||||||||    
T  16688635 ggctataaataccacccttgagaacactctcaggcatccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttc 16688734  T
Q  228 tgcatgtaca 237  Q
    |||| |||||    
T  16688735 tgcaggtaca 16688744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 19573821 - 19573604
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  |||||||| |||||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||| | ||||||||    
T  19573821 catatcgccgccatactaaatctctagaaacttctataaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagccc 19573722  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgt 219  Q
    ||||||||||||||||||||||||||||||||||||||   ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  19573721 atagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaaccctagtatacgattcttaaccctagaatccttattgt 19573622  T
Q  220 actttttctgcatgtaca 237  Q
    |||||||||||| |||||    
T  19573621 actttttctgcaagtaca 19573604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 20090631 - 20090415
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||||| ||||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||    
T  20090631 ccatggcgccgcctcactaatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagccc 20090532  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    |||| |||||||||||||||||||||||||||||||||   |||||| |||||||  |||||||| | |||||||||| |||||||||||||||||||||    
T  20090531 ataggaggctataaataccacccttgagaacactctcatctatccaagaatcagtctaaaaccctcgcatacgattctcaaccctagaatccttattgta 20090432  T
Q  221 ctttttctgcatgtaca 237  Q
    |||||| |||| |||||    
T  20090431 ctttttttgcaagtaca 20090415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 22467515 - 22467725
Alignment:
Q  29 gccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||  |||||||||||||||||  ||||||||||||| ||| ||||||||||||||    
T  22467515 gccgccttactaaacctctagaaccttatagaaaccccccaaaatacctaaatacccctattactttgagactaagcaaccgaaacccaagcccatagaa 22467614  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||||||||||||||||||||||||  |||| |||| |||||  |||||||| || |||||||||||| |||||||| |||||||||||||||    
T  22467615 ggctataaataccacccttgagaacactctcaaggatcgaatattcagtctaaaccctaatagacgattcttaacactagaatctttattgtactttttc 22467714  T
Q  228 tgcatgtacag 238  Q
    |||| ||||||    
T  22467715 tgcaagtacag 22467725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 8668070 - 8668267
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||||||||||||||||||||| |||||||  |  |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  8668070 aacctctagaaccttctagaaaccacccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaagactataaatac 8668169  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||||||| |||||   |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8668170 cacccttgagaacattctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 8668267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 19011801 - 19011614
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||||||||||||||||||||  ||||||||||  |||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||    
T  19011801 aacctctagaaccttctagaaactacccaaaatacctaaatacccctattacttggacactaagaaaccaaaacccaagcccatagaaggctataaatac 19011702  T
Q  140 cacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    ||||||||||||||||||||   ||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19011701 cacccttgagaacactctcaagtatctaataatcagtctaaaaaccctagaatacgattcttaaccctagaatccttattgtactttt 19011614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 11231281 - 11231497
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  |||||||| ||||||||| |||||| ||||||| ||||||| |||||||||| ||||||||||||||| | ||||||||    
T  11231281 catatcgccgccatactaaatctctagaaacttctagaagccgccctaaatacataaataccgctattacttggagactaagcaaccaagacccaagccc 11231380  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtac 221  Q
    ||||||| |||||||||||||||||||||| ||||||||  ||| |||| ||| | ||||||||||||||||||||||||||||| |||| |||||||||    
T  11231381 atagaagactataaataccacccttgagaagactctcagtaatctaatattcaatcaaaaccctagtatacgattcttaaccctaaaatctttattgtac 11231480  T
Q  222 tttttctgcatgtacag 238  Q
    ||||| |||| ||||||    
T  11231481 tttttatgcaagtacag 11231497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 19577439 - 19577223
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  |||||||| ||||||||||||||||    || | |||||||||||||||||| ||||||||||||||| | ||||| ||    
T  19577439 catatcgccgccatactaaatctctagaaacttctagaaaccgccc----tatataaatacccctattacttggagactaagcaaccaagacccaagtcc 19577344  T
Q  122 atagaaggctataaataccacccttgagaacactctca--gagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttatt 217  Q
    ||||||||||||||||||||||||||||||||||||||   | || ||||||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  19577343 atagaaggctataaataccacccttgagaacactctcaagtatatacaataatcagtctaaaaaccctagtatacgattcttaaccctagaatctttatt 19577244  T
Q  218 gtactttttctgcatgtacag 238  Q
    |||||||||||||| ||||||    
T  19577243 gtactttttctgcaagtacag 19577223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 40 - 238
Target Start/End: Original strand, 8650040 - 8650235
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||| ||| |||||||||||||||||  ||||| |||||||||||||||||||    
T  8650040 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattatttggagactaagcaaccaaaactcaagctcatagaaggctataaatac 8650139  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||||||||||||||   |||||||| |||||  |||||||| || |||||||||||||||||||||||||   ||||||||||||| ||||||    
T  8650140 cacccttgagaacactctcacgtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatcctta---tactttttctgcaagtacag 8650235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 19008675 - 19008533
Alignment:
Q  17 atttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||| || |||||||||||| | |||    
T  19008675 atttcccatagcgccgccttactaacctctagaaccttctagaaacctcccgaaatacgtaaatacccctattacttggaggctaagcaaccaagaccca 19008576  T
Q  117 agcccatagaaggctataaataccacccttgagaacactctca 159  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  19008575 agcccatagaaggctataaataccacctttgagaacactctca 19008533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 18929575 - 18929399
Alignment:
Q  17 atttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||| ||| || |||||||||||| | |||    
T  18929575 atttcccatagcgccgccttactaacctctagaaccttctagaaaccacccgaaatacgtaaatacccctattatttggaggctaagcaaccaagaccca 18929476  T
Q  117 agcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    ||||||||||||||||||||||||||| |||||||||||||||   ||| |||||||| |  |||||||||||||||    
T  18929475 agcccatagaaggctataaataccacctttgagaacactctcaagcatctaataatcaatctaaaaccctagtatac 18929399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 19019432 - 19019315
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  19019432 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatac 19019333  T
Q  140 cacccttgagaacactct 157  Q
    ||||||||||||||||||    
T  19019332 cacccttgagaacactct 19019315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 17997001 - 17996834
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatag 125  Q
    ||||||||| | ||| |||||||| ||||||||||||||||  ||||||| ||||||||||||||||||  | ||||| |||  ||| ||||||||||||    
T  17997001 gcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttgggggctaagtaactgaaacccaagcccatag 17996902  T
Q  126 aaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||   ||||||||||||||    
T  17996901 aaggctataaataccacccttgggaacactctcaggtatccaataatcagtctgaaaccctagtatac 17996834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 16666257 - 16666379
Alignment:
Q  29 gccgccttacta-acctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    |||||||||||  ||||||||||||||||||||||||||| | ||||  ||||||||||| |||||| ||| ||||||||||||| ||||||||||||||    
T  16666257 gccgccttactggacctctagaaccttctagaaaccgccctatatacctaaatacccctactacttggagattaagcaaccaaaacccaagcccatagaa 16666356  T
Q  128 ggctataaataccacccttgaga 150  Q
    ||||||||||||||||| |||||    
T  16666357 ggctataaataccacccatgaga 16666379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 192
Target Start/End: Original strand, 25970102 - 25970271
Alignment:
Q  26 agcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccata 124  Q
    |||||| ||| | ||| |||||||| ||||||||||||||||  ||||||| ||| |||||||||||||| ||| ||||||||| ||| |||||||||||    
T  25970102 agcgccacctcaataaactctagaatcttctagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccata 25970201  T
Q  125 gaaggctataaataccacccttgagaacactctc-agagatccaataatcagt-aaaaaccctagtatac 192  Q
    ||||||||||||||| || ||||||| || |||| ||  ||||||||||||||  |||||||||||||||    
T  25970202 gaaggctataaatactactcttgagatcattctcaaggcatccaataatcagtctaaaaccctagtatac 25970271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 192
Target Start/End: Original strand, 25974542 - 25974711
Alignment:
Q  26 agcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccata 124  Q
    |||||| ||| | ||| |||||||| ||||||||||||||||  ||||||| ||| |||||||||||||| ||| ||||||||| ||| |||||||||||    
T  25974542 agcgccacctcaataaactctagaatcttctagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccata 25974641  T
Q  125 gaaggctataaataccacccttgagaacactctc-agagatccaataatcagt-aaaaaccctagtatac 192  Q
    ||||||||||||||| || ||||||| || |||| ||  ||||||||||||||  |||||||||||||||    
T  25974642 gaaggctataaatactactcttgagatcattctcaaggcatccaataatcagtctaaaaccctagtatac 25974711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 13727826 - 13727716
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatag 125  Q
    ||||||||| | ||| |||||||| ||||||||||||||||  ||||||| |||||||||||||||||  ||||||||||||| ||| ||||| ||||||    
T  13727826 gcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttagagactaagcaaccgaaacccaagtccatag 13727727  T
Q  126 aaggctataaa 136  Q
    |||||||||||    
T  13727726 aaggctataaa 13727716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 13727317 - 13727252
Alignment:
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||| |||||    
T  13727317 ggctataaataccacccttgagaacactctcaggtatccaataatcagtctaaaaccctaatatac 13727252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 26460037 - 26460094
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||    
T  26460037 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtaca 26460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 4279509 - 4279450
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacaga 239  Q
    ||||||| | ||||||||||| ||||||||||||||  |||||||||||||| |||||||    
T  4279509 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacaga 4279450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 4282791 - 4282733
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||| | ||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  4282791 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacag 4282733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 11694869 - 11694927
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||| | ||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  11694869 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacag 11694927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 34336131 - 34336073
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||| || |||||||||||  |||||||||||||| ||||||    
T  34336131 aaccctagtctacgattcttagccttagaatccttaccgtactttttctgcaagtacag 34336073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 12697292 - 12697257
Alignment:
Q  115 caagcccatagaaggctataaataccacccttgaga 150  Q
    |||||||||||| |||||||||||||||||||||||    
T  12697292 caagcccatagagggctataaataccacccttgaga 12697257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 11091908 - 11091981
Alignment:
Q  77 aaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgaga 150  Q
    |||||||| |||||||||  | ||||| ||||| ||| || ||||||||| |||||||||||| | ||||||||    
T  11091908 aaatacccttattacttgctgtctaagtaaccataattcaggcccatagagggctataaatacaaaccttgaga 11091981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 13728663 - 13728606
Alignment:
Q  136 ataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||| ||||||||||||||||||  ||||||||||||||  ||||||||| |||||    
T  13728663 ataccatccttgagaacactctcaggaatccaataatcagtctaaaaccctaatatac 13728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 13795519 - 13795568
Alignment:
Q  128 ggctataaataccacccttgagaacactctcagag-atccaataatcagt 176  Q
    |||||||||||||||||||| || |||||||| || ||||||||||||||    
T  13795519 ggctataaataccacccttgtgatcactctcacagcatccaataatcagt 13795568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 3e-79; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 21834790 - 21835011
Alignment:
Q  17 atttcccatagcgccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcc 115  Q
    |||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||| ||| ||    
T  21834790 atttcccagagagccgccttactaaacctctagaaccttctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaaccc 21834889  T
Q  116 aagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcctta 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||| ||||||||| || |||||||||||||||||||||||||    
T  21834890 aagcccatagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtcaaaaccctaatagacgattcttaaccctagaatcctta 21834989  T
Q  216 ttgtactttttctgcatgtaca 237  Q
    |||||||||||||||| |||||    
T  21834990 ttgtactttttctgcaagtaca 21835011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 29 - 237
Target Start/End: Original strand, 14676549 - 14676758
Alignment:
Q  29 gccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  14676549 gccgccttactaaacctctagaaccttctagaaaccgcccaaaatacctaaatatccctattacttggagactaagcaaccaaaacccaagcccatagaa 14676648  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||||||||||| ||||||||||||   |||||||| |||||| ||||||||  | |||||||||||||||||||||||||||||||||||||    
T  14676649 ggctataaataccacccttcagaacactctcaagtatccaatattcagtataaaccctaagagacgattcttaaccctagaatccttattgtactttttc 14676748  T
Q  228 tgcatgtaca 237  Q
    |||| |||||    
T  14676749 tgcaagtaca 14676758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 14673343 - 14673552
Alignment:
Q  29 gccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  14673343 gccgccttactaaacctctagaaccttctagaaaccgcccaaaatacctaaatatccctattacttggagactaagcaaccaaaacccaagcccatagaa 14673442  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||||||||||| |||||||||||||  |||||||| |||||| ||||||||  | ||||||||||| |||||||||||||||||||||||||    
T  14673443 ggctataaataccacccttcagaacactctcaggtatccaatattcagtataaaccctaagagacgattcttaa-cctagaatccttattgtactttttc 14673541  T
Q  228 tgcatgtacag 238  Q
    |||| ||||||    
T  14673542 tgcaagtacag 14673552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 54 - 238
Target Start/End: Original strand, 21408365 - 21408549
Alignment:
Q  54 tctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaaca 153  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  21408365 tctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaaca 21408464  T
Q  154 ctctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||   |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21408465 ctctcaagtatccaatattcagtcaaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacag 21408549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 54 - 238
Target Start/End: Original strand, 21802857 - 21803041
Alignment:
Q  54 tctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaaca 153  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  21802857 tctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaaca 21802956  T
Q  154 ctctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||   |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21802957 ctctcaagtatccaatattcagtcaaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacag 21803041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 30 - 225
Target Start/End: Original strand, 31708885 - 31709081
Alignment:
Q  30 ccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaagg 129  Q
    |||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||     
T  31708885 ccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccattgaaga 31708984  T
Q  130 ctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    ||||||||||||||||||||||||||||||   ||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31708985 ctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaccctagtatacgattcttaaccctagaatctttattgtactttt 31709081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 31711102 - 31711301
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccataga 126  Q
    ||||||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||| ||    
T  31711102 gcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagctcattga 31711201  T
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    |||||||||||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  31711202 aggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaccctagtatacgattcttaaccctaaaatctttattgtactttt 31711301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 14369702 - 14369911
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14369702 catatcgccgccatactaaatctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagccc 14369801  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    ||||||||||||||||||||||||||||||||||||||   ||| ||||| |||| |||||||||| ||||||||||        |||||||||||||||    
T  14369802 atagaaggctataaataccacccttgagaacactctcaagtatctaataaacagtcaaaaaccctaatatacgattc--------agaatccttattgta 14369893  T
Q  221 ctttttctgcatgtacag 238  Q
    ||||||||||| ||||||    
T  14369894 ctttttctgcaagtacag 14369911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 14370253 - 14370462
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14370253 catatcgccgccatactaaatctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagccc 14370352  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    ||||||||||||||||||||||||||||||||||||||   ||| ||||| |||| |||||||||| ||||||||||        |||||||||||||||    
T  14370353 atagaaggctataaataccacccttgagaacactctcaagtatctaataaacagtcaaaaaccctaatatacgattc--------agaatccttattgta 14370444  T
Q  221 ctttttctgcatgtacag 238  Q
    ||||||||||| ||||||    
T  14370445 ctttttctgcaagtacag 14370462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 20135095 - 20134878
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  ||||||||  ||||| ||||||||| ||||||| |||||||||||||| ||| ||||||||||||||| | ||||||||    
T  20135095 catatcgccgccatactaaatctctagaaatttctataaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagccc 20134996  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgt 219  Q
    |||||||||||||||||||||||||||||||| |||||   ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  20134995 atagaaggctataaataccacccttgagaaca-tctcaagtatctaataatcagtctaaaaaccctagtatacgattcttaaccctagaatccttattgt 20134897  T
Q  220 actttttctgcatgtacag 238  Q
    ||||||| |||| ||||||    
T  20134896 actttttatgcaagtacag 20134878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 20131940 - 20131753
Alignment:
Q  54 tctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaaca 153  Q
    |||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  20131940 tctagaaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaaca 20131841  T
Q  154 ctctcagagatccaataatcagt---aaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||   ||| ||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  20131840 ctctcaagtatctaataatcagtctaaaaacccctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacag 20131753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 3303148 - 3303345
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||||||||| |||||||||||| ||||||  |  |||||||||||||||||| ||| |||||||||| || |||||| |||||||||||||||||||    
T  3303148 aacctctagaactttctagaaaccgtccaaaaggcctaaatacccctattacttggagattaagcaaccacaacccaagctcatagaaggctataaatac 3303247  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||| ||||||||||||||||   |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  3303248 cacacttgagaacactctcaagtatccaatattcagtctaaaccctaataaacgattcttaaccctagaatccttattgtactttttctgcaagtaca 3303345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 14366113 - 14366322
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14366113 catatcgccgccatactaaatctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagccc 14366212  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    ||| ||||||||||||||||||||||||||||||||||   ||  ||||| |||| |||||||||| ||||||||||        |||||||||||||||    
T  14366213 atataaggctataaataccacccttgagaacactctcaagtatgtaataaacagtcaaaaaccctaatatacgattc--------agaatccttattgta 14366304  T
Q  221 ctttttctgcatgtacag 238  Q
    ||||||||||| ||||||    
T  14366305 ctttttctgcaagtacag 14366322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 36281442 - 36281244
Alignment:
Q  29 gccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    |||||||||||||  ||||||||||||||||| | ||||||||||||  |||||||||||||||||| ||||||||||| ||||| |||||||||||||     
T  36281442 gccgccttactaaaactctagaaccttctagagatcgcccaaaatacctaaatacccctattacttggagactaagcaatcaaaacccaagcccatagag 36281343  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtacttttt 226  Q
    ||||||||||| |||||||||||||||||||||  ||  ||| ||||||  |||||||| || ||||||||||||||||||||| ||||| ||||||||    
T  36281342 ggctataaatatcacccttgagaacactctcaggcatggaattatcagtctaaaccctaatagacgattcttaaccctagaatcattattatacttttt 36281244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 238
Target Start/End: Original strand, 3300082 - 3300280
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||||||||| |||||||||||||||||||  |  |||||||| ||||||||| ||||||||||||||||| |||||||||||||||  |||||||||    
T  3300082 aacctctagaactttctagaaaccgcccaaaaggcctaaataccc-tattacttggagactaagcaaccaaaacccaagcccatagaagagtataaatac 3300180  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaa-ccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||||||||||  ||   |||||||| |||||  |||||||| || ||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  3300181 cacccttgagaacacttccaagtatccaatattcagtctaaaccctaataaacgattcttaacccctagaatccttatggtactttttctgcaagtacag 3300280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 21938590 - 21938737
Alignment:
Q  30 ccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaag 128  Q
    |||||| | ||| |||||||| ||||||||||||||||  ||||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  21938590 ccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccccattacttggagactaagcaaccgaaatccaagcccatagaag 21938689  T
Q  129 gctataaataccacccttgagaacactctcagagatccaataatcagt 176  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  21938690 gctataaataccacccttgagaacactctcaggtatctaataatcagt 21938737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 21936072 - 21936191
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||| ||||||||| | ||| |||||||| ||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||| ||| ||||| |    
T  21936072 ccatggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagtc 21936171  T
Q  121 catagaaggctataaatacc 140  Q
    ||||||||||||||||||||    
T  21936172 catagaaggctataaatacc 21936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 17007778 - 17007965
Alignment:
Q  42 cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagact-aagcaaccaaaatccaagcccatagaaggctataaatacc 140  Q
    |||| |||| |||| |||||||||| |||||||| |||||||||| || ||||  || | |||||||| |||||||||||| ||  ||||||||||||      
T  17007778 cctccagaagcttccagaaaccgcctaaaatacataaatacccctgttgcttgg-gagtcaagcaaccgaaatccaagcccgtaacaggctataaatagt 17007876  T
Q  141 acccttgagaacactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || ||||||| || |||||| | ||||||||||||||  ||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  17007877 actcttgagatcattctcagggcatccaataatcagtctaaaaccctaatatccgattcttaaccctagaatcccttattgtacttttt 17007965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 17541172 - 17540985
Alignment:
Q  42 cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagact-aagcaaccaaaatccaagcccatagaaggctataaatacc 140  Q
    |||| |||| |||| |||||||||| |||||||| |||||||||| || ||||  || | |||||||| |||||||||||| ||  ||||||||||||      
T  17541172 cctccagaagcttccagaaaccgcctaaaatacataaatacccctgttgcttgg-gagtcaagcaaccgaaatccaagcccgtaacaggctataaatagt 17541074  T
Q  141 acccttgagaacactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || ||||||| || |||||| | ||||||||||||||  ||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  17541073 actcttgagatcattctcagggcatccaataatcagtctaaaaccctaatatccgattcttaaccctagaatcccttattgtacttttt 17540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 2495 - 2321
Alignment:
Q  53 ttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaac 152  Q
    |||||||||||||| |||||||  ||||| |||| || |||| || | ||||||    || ||||||||| || || ||||||||||||| || |||| |    
T  2495 ttctagaaaccgcctaaaatactaaaatatccctgttgcttggaggccaagcaatagtaacccaagcccacagcagactataaataccactctagagatc 2396  T
Q  153 actctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    | |||||   |||||||||||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  2395 attctcaagcatccaataatcagtcaaaaccctaatatacgattcttaaccctagaatcacctattgtacttttt 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 753320 - 753508
Alignment:
Q  39 taacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaata 138  Q
    ||||||| |||| |||||||||||| || |||||||  ||||| ||||  | |||| || | ||||||    || ||||||||| || || |||||||||    
T  753320 taacctccagaaacttctagaaaccacctaaaatactaaaatatccctgctgcttggaggccaagcaatagtaacccaagcccacagcagactataaata 753419  T
Q  139 ccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    |||| || |||| || |||||   |||||| ||||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  753420 ccactctagagatcattctcaagcatccaacaatcagtcaaaaccctaatatacgattcttaaccctagaatcacctattgtacttttt 753508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 17526753 - 17526566
Alignment:
Q  42 cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatacca 141  Q
    |||| |||| |||| |||||||||| |||||||| |||||||||| || ||||    | |||||||| ||| |||||| ||||  ||||||||||||| |    
T  17526753 cctccagaagcttccagaaaccgcctaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagctcataacaggctataaatacta 17526654  T
Q  142 cccttgagaacactctcagag-atccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    | ||||||| || |||||| | ||||||||||||||  |||| |||| |||  |||||||||||||||||| ||||||||||| ||||    
T  17526653 ctcttgagatcattctcagggcatccaataatcagtctaaaatcctaatatctgattcttaaccctagaatcccttattgtacatttt 17526566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 14714582 - 14714522
Alignment:
Q  242 tcatgccactgttgggccttctaagggagccaacattggtgagaatagtgtcaaactctct 302  Q
    ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  14714582 tcatgccactgttgggccttctaagggagccaacactggtgtggatagtgtcaaactctct 14714522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 44754245 - 44754345
Alignment:
Q  111 aatccaagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaat 210  Q
    ||||||| |||| || |||||||||||||||| || |||| || ||||||| ||||||||||||||  |||||||| ||||| ||||| |||||||||||    
T  44754245 aatccaaacccacagcaggctataaataccactctagagatcattctcagatatccaataatcagtctaaaccctaatatacaattctgaaccctagaat 44754344  T
Q  211 c 211  Q
    |    
T  44754345 c 44754345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 37718103 - 37718285
Alignment:
Q  47 agaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccaccctt 146  Q
    |||| |||| || ||||||| |||||||| |||||||||| || ||||    | |||||||| ||| |||||| ||||  ||||||||||||  || |||    
T  37718103 agaagcttccagtaaccgcctaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagctcataacaggctataaatagtactctt 37718202  T
Q  147 gagaacactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||| || |||||  | ||| ||||||||||  |||||| |||||||||||||||||||||||||| || |||||||||||||    
T  37718203 gagatcattctcaaggcatctaataatcagtctaaaaccttagtatacgattcttaaccctagaatcccctattgtacttttt 37718285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 207
Target Start/End: Complemental strand, 16077941 - 16077780
Alignment:
Q  47 agaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccaccctt 146  Q
    |||| |||| ||||| |||| |||||||| |||||||| | || |||| |  | |||||||| ||| |||||||||||| ||||||||||||| || |||    
T  16077941 agaagcttccagaaagcgcctaaaatacataaatacccatgttgcttggaagccaagcaaccgaaacccaagcccatagcaggctataaatactactctt 16077842  T
Q  147 gagaacactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctag 207  Q
    |||| || |||| ||  ||| ||| ||||||  ||||||||| ||||||| |||||||||||    
T  16077841 gagatcattctcaaggcatctaattatcagtctaaaccctagaatacgatacttaaccctag 16077780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 16083643 - 16083467
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||| |||||||||| |||||||| |||||||||| || |||||   | |||||||| ||| |||| | ||||| ||||||||||||| || |||||||     
T  16083643 cttccagaaaccgcctaaaatacaaaaatacccctgttgcttgagagcaaagcaaccgaaacccaacctcatagcaggctataaatactactcttgagat 16083544  T
Q  152 cactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || |||| ||  ||||||| |||| |  ||||||||| ||||||| ||||||||||  || ||||||||| ||||||    
T  16083543 cattctcaaggcatccaattatcaatctaaaccctagaatacgatacttaaccctaatatcccttattgtgcttttt 16083467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 16085050 - 16084874
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||| |||||||||| |||||||| |||||||||| || |||||   | |||||||| ||| |||| | ||||| ||||||||||||| || |||||||     
T  16085050 cttccagaaaccgcctaaaatacaaaaatacccctgttgcttgagagcaaagcaaccgaaacccaacctcatagcaggctataaatactactcttgagat 16084951  T
Q  152 cactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || |||| ||  ||||||| |||| |  ||||||||| ||||||| ||||||||||  || ||||||||| ||||||    
T  16084950 cattctcaaggcatccaattatcaatctaaaccctagaatacgatacttaaccctaatatcccttattgtgcttttt 16084874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 16086457 - 16086281
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||| |||||||||| |||||||| |||||||||| || |||||   | |||||||| ||| |||| | ||||| ||||||||||||| || |||||||     
T  16086457 cttccagaaaccgcctaaaatacaaaaatacccctgttgcttgagagcaaagcaaccgaaacccaacctcatagcaggctataaatactactcttgagat 16086358  T
Q  152 cactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || |||| ||  ||||||| |||| |  ||||||||| ||||||| ||||||||||  || ||||||||| ||||||    
T  16086357 cattctcaaggcatccaattatcaatctaaaccctagaatacgatacttaaccctaatatcccttattgtgcttttt 16086281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 16087864 - 16087688
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||| |||||||||| |||||||| |||||||||| || |||||   | |||||||| ||| |||| | ||||| ||||||||||||| || |||||||     
T  16087864 cttccagaaaccgcctaaaatacaaaaatacccctgttgcttgagagcaaagcaaccgaaacccaacctcatagcaggctataaatactactcttgagat 16087765  T
Q  152 cactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || |||| ||  ||||||| |||| |  ||||||||| ||||||| ||||||||||  || ||||||||| ||||||    
T  16087764 cattctcaaggcatccaattatcaatctaaaccctagaatacgatacttaaccctaatatcccttattgtgcttttt 16087688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 21945924 - 21945968
Alignment:
Q  181 accctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21945924 accctagtatacgattcttaaccctagaatccttattgtactttt 21945968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 18973320 - 18973378
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  18973320 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 18973378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 25502708 - 25502766
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  25502708 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 25502766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 26908541 - 26908483
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  26908541 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 26908483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 18977835 - 18977892
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||    
T  18977835 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtaca 18977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 25560310 - 25560367
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||    
T  25560310 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtaca 25560367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 26905271 - 26905214
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||    
T  26905271 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtaca 26905214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 36602524 - 36602678
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||| |||| ||||||||||||||| |||||||  ||||  |||| || |||| || | |||||||   || | ||||||| || |||||||||||||    
T  36602524 aacctccagaagcttctagaaaccgcctaaaatactaaaatgtccctgttgcttggaggccaagcaacagtaaccaaagcccacagcaggctataaatac 36602623  T
Q  140 cacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacg 193  Q
    ||| || |||| || |||||  |||| ||||||||||  ||||||||||||||||    
T  36602624 cactctagagatcattctcaaggatcgaataatcagtctaaaaccctagtatacg 36602678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 36598332 - 36598486
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||| |||| ||||||||||||||| |||||||  ||||  |||| || |||| || | |||||||   || | ||||||| || | |||||||||||    
T  36598332 aacctccagaagcttctagaaaccgcctaaaatactaaaatgtccctgttgcttggaggccaagcaacagtaaccaaagcccacagcatgctataaatac 36598431  T
Q  140 cacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacg 193  Q
    ||| || |||| || |||||  |||| ||||||||||  ||||||||||||||||    
T  36598432 cactctagagatcattctcaaggatcgaataatcagtctaaaaccctagtatacg 36598486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 32231498 - 32231449
Alignment:
Q  178 aaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  32231498 aaaaccctaatatacgattcttaaccctagaatcacctattgtacttttt 32231449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 25548052 - 25548098
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||||||||||||||| |||  |||||||||||||| ||||||    
T  25548052 cgattcttaaccctagaatctttaccgtactttttctgcaagtacag 25548098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 6e-77; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 21 - 238
Target Start/End: Original strand, 10968706 - 10968923
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  10968706 cccatagcgccgccttaatagtctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcc 10968805  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||  |||||||| || ||||||||||||||||||||| ||||||||    
T  10968806 catagaaggctataaataccacccttgagaacactctcaaggatccaatattcagtctaaaccctaatagacgattcttaaccctagaatctttattgta 10968905  T
Q  221 ctttttctgcatgtacag 238  Q
    |||||| |||| ||||||    
T  10968906 ctttttttgcaagtacag 10968923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 238
Target Start/End: Original strand, 10754937 - 10755154
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    ||||||||||||||||| ||  ||||| || |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  10754937 cccatagcgccgccttaatagtctctaaaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcc 10755036  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||  |||||||| || ||||||||||||||||||||| ||||||||    
T  10755037 catagaaggctataaataccacccttgagaacactctcaaggatccaatattcagtctaaaccctaatagacgattcttaaccctagaatctttattgta 10755136  T
Q  221 ctttttctgcatgtacag 238  Q
    |||||| |||| ||||||    
T  10755137 ctttttttgcaagtacag 10755154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 10757214 - 10757430
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||| |||||||    
T  10757214 cccatagcgccgccttaatagtctctagaatcttctagaaaccgccctaaatacataaatacccatattacttggagactaagcaaccaaaacccaagcc 10757313  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    |||||||||||| ||||||||||||||||||||| ||||  ||||||||| |||||  |||||||| || ||||||||||||||||||||| ||||||||    
T  10757314 catagaaggctacaaataccacccttgagaacacactcaaggatccaatattcagtctaaaccctaatagacgattcttaaccctagaatctttattgta 10757413  T
Q  221 ctttttctgcatgtaca 237  Q
    ||||||||||| |||||    
T  10757414 ctttttctgcaagtaca 10757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 10970385 - 10970601
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||| |||||||    
T  10970385 cccatagcgccgccttaatagtctctagaatcttctagaaaccgccctaaatacataaatacccttattacttggagactaagcaaccaaaacccaagcc 10970484  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    |||||||||||| ||||||||||||||||||||| ||||  ||||||||| |||||  |||||||| || ||||||||||||||||||||| ||||||||    
T  10970485 catagaaggctacaaataccacccttgagaacacactcaaggatccaatattcagtctaaaccctaatagacgattcttaaccctagaatctttattgta 10970584  T
Q  221 ctttttctgcatgtaca 237  Q
    ||||||||||| |||||    
T  10970585 ctttttctgcaagtaca 10970601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 22 - 226
Target Start/End: Original strand, 23882330 - 23882537
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||| ||||||||| | ||| || ||||| ||||||||||||||||  ||||||| |||||||||||||||||| || |||||||||| ||| |||||||    
T  23882330 ccatggcgccgcctcaataatctttagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagtctaagcaaccgaaacccaagcc 23882429  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatc-cttattg 218  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||| ||| |  ||||||||| |||||||||||||||||||||||| |||||||    
T  23882430 catagaaggctataaataccacccttgacaacactctcaggtatccaatagtcaatctaaaaccctaatatacgattcttaaccctagaatctcttattg 23882529  T
Q  219 tacttttt 226  Q
    | ||||||    
T  23882530 tgcttttt 23882537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 27789015 - 27789229
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatc 114  Q
    |||| ||||| ||||||||| | ||| |||||||| ||||||||||||||||  ||||||| ||||| || ||||||||| ||||||||||||| ||| |    
T  27789015 cattacccatggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatagccttattacttggagactaagcaaccgaaacc 27789114  T
Q  115 caagcccatagaa-ggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-c 211  Q
    |||||| | | || ||||||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||||||||||||| |    
T  27789115 caagcctaaaaaaaggctataaataccacccttgagaacactctcaagtatccaataatcagtctaaaaccctagtatacgattcttaaccctagaatcc 27789214  T
Q  212 cttattgtacttttt 226  Q
    |||||||||||||||    
T  27789215 cttattgtacttttt 27789229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 30 - 226
Target Start/End: Original strand, 23878690 - 23878890
Alignment:
Q  30 ccgccttactaacctctagaaccttctagaaaccgcc-caaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaag 128  Q
    |||||| | ||| |||||||| ||||||||||||||| | ||||||| |||||||| ||||||||| ||||||||||||| ||| |||||| |||||||     
T  23878690 ccgcctcaataatctctagaatcttctagaaaccgcctctaaatacataaatacccttattacttggagactaagcaaccgaaacccaagctcatagaa- 23878788  T
Q  129 gctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtat--acgattcttaaccctagaatc-cttattgtacttt 224  Q
    ||||||||||||||||||||||||| ||||||  |||||||| |||||  ||||||||| |||  |||||||||||| |||||||| |||||||| ||||    
T  23878789 gctataaataccacccttgagaacagtctcaggtatccaatagtcagtctaaaaccctaatatacacgattcttaacactagaatctcttattgtgcttt 23878888  T
Q  225 tt 226  Q
    ||    
T  23878889 tt 23878890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 30953168 - 30953345
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||| |||| ||||| |||||||| |||||||||| || ||||    | |||||||| ||| |||||||||||| ||||||||||||| || |||||||     
T  30953168 cttccagaagccgcctaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatactactcttgagat 30953267  T
Q  152 cactctca-gagatccaataatcagta-aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || ||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30953268 cattcttaagacatccaataatcagtataaaaccctagtatacgattcttaaccctagaatcccttattgtacttttt 30953345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 7202929 - 7202741
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||| |||| ||||||||||| |||||||||||  ||||| |||| || |||| |  |||||||||   || ||||||||| || |||||||||||||    
T  7202929 aacctccagaagcttctagaaactgcccaaaatactaaaatatccctgttgcttggaagctaagcaacagtaacccaagcccaaagcaggctataaatac 7202830  T
Q  140 cacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    ||| || |||| || ||||||| |||||||| |||||  ||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  7202829 cactctagagatcattctcagatatccaatagtcagtctaaaaccctaatatacgattcttaaccctagaatcccttattgtgcttttt 7202741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 22763078 - 22763176
Alignment:
Q  130 ctataaataccacccttgagaacactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaatccttattgtacttttt 226  Q
    ||||||||||||| ||||||| || |||||| | ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22763078 ctataaataccactcttgagatcattctcagggcatccaataatcagtctaaaatcctagtatacgattcttaaccctagaatccttattgtacttttt 22763176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 22751797 - 22751898
Alignment:
Q  127 aggctataaataccacccttgagaacactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaatccttattgtacttt 224  Q
    ||||| |||||||||| ||||||| || |||| | | |||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  22751797 aggctgtaaataccactcttgagatcattctctgggcatccaataataagtctaaaaccctagtatacgattcttaaccctagaatccttattgtacttt 22751896  T
Q  225 tt 226  Q
    ||    
T  22751897 tt 22751898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 28924763 - 28924663
Alignment:
Q  129 gctataaataccacccttgagaacactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaat-ccttattgtactttt 225  Q
    ||||||||||| ||| ||||||||| |||||  | ||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  28924763 gctataaatactacctttgagaacattctcaaggcatccaataatcagtctaaaaccctagtatacgattcttaaccccagaatcccttattgtactttt 28924664  T
Q  226 t 226  Q
    |    
T  28924663 t 28924663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 12327891 - 12328008
Alignment:
Q  115 caagcccata-gaaggctataaataccacccttgagaacactctcagag-atccaataatcagtaa--aaaccctagtatacgattcttaaccctagaat 210  Q
    |||||||||| | ||||||||||| | |||||||||||||||||||  | || ||||||||||| |  ||||||||| ||||||||||||| ||||||||    
T  12327891 caagcccataaggaggctataaattcaacccttgagaacactctcaaggcattcaataatcagttatgaaaccctagaatacgattcttaatcctagaat 12327990  T
Q  211 -ccttattgtactttttc 227  Q
     |||||||||||||||||    
T  12327991 cccttattgtactttttc 12328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 726438 - 726498
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacagat 240  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  726438 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacagat 726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 722864 - 722922
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  722864 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 722922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 36250884 - 36250994
Alignment:
Q  118 gcccatagaaggctataaataccacccttgagaacactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcct-ta 215  Q
    |||||||||||| |||||||||||| ||||||| || |||| ||  ||||||||||||||  ||| ||||| ||| ||| ||||||||||| ||||| ||    
T  36250884 gcccatagaaggttataaataccactcttgagatcattctcaaggcatccaataatcagtctaaagcctagaatatgatacttaaccctagtatcctcta 36250983  T
Q  216 ttgtacttttt 226  Q
    |||||||||||    
T  36250984 ttgtacttttt 36250994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 50158117 - 50158077
Alignment:
Q  242 tcatgccactgttgggccttctaagggagccaacattggtg 282  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  50158117 tcatgccactgttgggtcttctaagggagccaacactggtg 50158077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 20494564 - 20494755
Alignment:
Q  39 taacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaata 138  Q
    ||||||| |||| ||||||||||||||| |||||||  ||||| || | || |||| || | ||||||    || ||||||||| |  ||||||||||||    
T  20494564 taacctccagaagcttctagaaaccgcctaaaatactaaaatatccatgttgcttggaggcgaagcaatagtaacccaagcccacaacaggctataaata 20494663  T
Q  139 ccacccttgagaacactctcagagatcca-ataatcagta-aaaaccctagtatacgattctt-aaccctagaat-ccttattgtacttttt 226  Q
    |||| || |||| || |||||   | ||  ||| |||||  ||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  20494664 ccactctagagatcattctcatgcaccccgatagtcagtctaaaaccctaatatacgattcttaaaccctagaatcccttattgtacttttt 20494755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 28926828 - 28926777
Alignment:
Q  176 taaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||||||||||||||||||||||||| | |||||| |||||||| |||||||    
T  28926828 taaaaaccctagtatacgattcttaatcatagaatcccttattgaacttttt 28926777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 29724700 - 29724643
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||| | ||||||||||  ||||||||||||||  |||||||||||||| |||||    
T  29724700 aaccctaatctacgattcttggccctagaatccttaccgtactttttctgcaagtaca 29724643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 8854273 - 8854057
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||| |||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||| |||||||    
T  8854273 cccatagcaccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccatattacttggagactaagcaaccaaaacccaagcc 8854174  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||    
T  8854173 catagaaggctataaataccacccttgagaacactctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgta 8854074  T
Q  221 ctttttctgcatgtaca 237  Q
    ||||||||||| |||||    
T  8854073 ctttttctgcaagtaca 8854057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 94702 - 94496
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||||||||| || | | |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  94702 cccatagcgccgccataatgatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcc 94603  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattg 218  Q
    ||| |||| |||||||||||| |||||||||||||||||   ||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  94602 catggaagactataaataccatccttgagaacactctcaagtatctaataatcagtctaaaaaccctaatatacgattcttaaccctagaatccttattg 94503  T
Q  219 tactttt 225  Q
    |||||||    
T  94502 tactttt 94496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 17601653 - 17601877
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatc 114  Q
    |||| ||||| ||||||||| | ||| || ||||| ||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||| ||| |    
T  17601653 cattacccatggcgccgcctcaataatctgtagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacc 17601752  T
Q  115 caagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-cc 212  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||  ||||||||| ||||||||||||||||||||||| ||    
T  17601753 caagcacatagaaggctataaatactacccttgagaacactctcaaatatccaataatcagtctaaaaccctaatatacgattcttaaccctagaatccc 17601852  T
Q  213 ttattgtactttttctgcatgtaca 237  Q
    ||||||||||||||||||| |||||    
T  17601853 ttattgtactttttctgcaagtaca 17601877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 49 - 237
Target Start/End: Complemental strand, 26900727 - 26900539
Alignment:
Q  49 aaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttga 148  Q
    |||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  26900727 aaccttctagaaaccgcccaaaaggcctaaatacccctattacttgaagactaagcaaccaaaactcaagcccatagaaagctataaataccacccttga 26900628  T
Q  149 gaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||||   |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26900627 gaacactctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 26900539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 16082663 - 16082860
Alignment:
Q  43 ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccac 142  Q
    |||||||| ||||||||||| |||| ||||||| ||||| |||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||    
T  16082663 ctctagaaacttctagaaactgccctaaatacataaataaccctattacttggaaactaagcaaccaagacccaagcccatagaaggctataaataccac 16082762  T
Q  143 ccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||||||||||||   ||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  16082763 ccttgagaacactctcaagtatctaataaccagtctaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacag 16082860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 18556645 - 18556835
Alignment:
Q  49 aaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttga 148  Q
    |||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18556645 aaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttga 18556744  T
Q  149 gaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcc-ttattgtactttttctgcatgtacag 238  Q
    |||||||||||   |||||||| |||||  |||||||| || |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18556745 gaacactctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatcctttattgtactttttctgcaagtacag 18556835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 16091839 - 16092035
Alignment:
Q  43 ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccac 142  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||    
T  16091839 ctctagaaacttctagaaaccgccctaaatacataaataaccctattacttggatactaagcaaccaagacccaagcccatagaaggctataaataccac 16091938  T
Q  143 ccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||||||||||   ||| ||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  16091939 ccttgagaacactctcaagtatctaataaccagtctaaaaaccctagtatacgattcttaaccctagaattcttattgtactttttatgcaagtaca 16092035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 17593645 - 17593870
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgcc-caaaatacacaaatacccctattacttgaagactaagcaaccaaaatc 114  Q
    |||| ||||| ||||||||| | ||| ||  |||| |||||||||||  || | ||||||| |||||||||||||||||| ||||||||||||| ||| |    
T  17593645 cattacccatggcgccgcctcaataatctgaagaatcttctagaaactacctctaaatacataaatacccctattacttggagactaagcaaccgaaacc 17593744  T
Q  115 caagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-cc 212  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||| ||    
T  17593745 caagcccatagaaggctataaataccacccttgacaacactctcagatatccaataatcagtctaaaaccctaatatacgattcttaaccctagaatccc 17593844  T
Q  213 ttattgtactttttctgcatgtacag 238  Q
    ||||||||||||||||||| ||||||    
T  17593845 ttattgtactttttctgcaagtacag 17593870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 103531 - 103358
Alignment:
Q  54 tctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaaca 153  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  103531 tctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatggaaggctataaataccatccttgagaaca 103432  T
Q  154 ctctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    ||||||   ||| |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  103431 ctctcaagtatctaataatcagtctaaaaaccctaatatacgattcttaaccctagaatccttattgtactttt 103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 8368418 - 8368205
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatc 114  Q
    |||| ||||||||||||||| | ||| |||||||| ||||||||||||||||  ||||||| |||||||||||||||||| |||||||| |||| ||| |    
T  8368418 cattacccatagcgccgcctcaataatctctagaatcttctagaaaccgcccttaaatacataaatacccctattacttggagactaagtaaccgaaacc 8368319  T
Q  115 caagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-cc 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||  |||| |||| |||||||||||||| |||||||| ||    
T  8368318 caagcccatagaaggctataaataccacccttgagaacactctcaaatatccaatagtcagtctaaaatcctaatatacgattcttaaacctagaatccc 8368219  T
Q  213 ttattgtacttttt 226  Q
    ||||||||||||||    
T  8368218 ttattgtacttttt 8368205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 21 - 238
Target Start/End: Complemental strand, 8857111 - 8856903
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||| |||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||  ||||||    
T  8857111 cccatagcaccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaactcaagcc 8857012  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
              |||||||||||||||||||||||||||||   |||||||| |||||  |||||||| || | ||||||||||||||||||||||||||||    
T  8857011 a---------tataaataccacccttgagaacactctcaagtatccaatattcagtctaaaccctaatagatgattcttaaccctagaatccttattgta 8856921  T
Q  221 ctttttctgcatgtacag 238  Q
    ||||||||||| ||||||    
T  8856920 ctttttctgcaagtacag 8856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 44 - 226
Target Start/End: Complemental strand, 15926858 - 15926673
Alignment:
Q  44 tctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacc 143  Q
    ||||||| | ||||||||||||| ||||||| ||||||||| | || ||||  ||| |||||||||||| |||||||||||| |||||||||||||||||    
T  15926858 tctagaaacctctagaaaccgcctaaaatacgcaaatacccatgttgcttggggaccaagcaaccaaaacccaagcccatagcaggctataaataccacc 15926759  T
Q  144 cttgagaacactctcagag-atccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgtacttttt 226  Q
    ||||||| || |||||| | |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15926758 cttgagagcattctcagggcatccaatattcagtctaaaaaccctagtatacgattcttaaccctagaatccttattgtacttttt 15926673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 26907331 - 26907147
Alignment:
Q  49 aaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttga 148  Q
    |||||||||||||||||||||||  |  |||||||||||||||||||||||     |||||||| |||||||||||||| |||||||||||||| |||||    
T  26907331 aaccttctagaaaccgcccaaaaggcctaaatacccctattacttgaagac-----aaccaaaacccaagcccatagaaagctataaataccactcttga 26907237  T
Q  149 gaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||||||   |||||||  |||||  |||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26907236 gaacactctcaagtatccaattttcagtctaaaccctaatagacgattcttaaccctagaattcttattgtactttttctgcaagtacag 26907147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 14566395 - 14566211
Alignment:
Q  43 ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccac 142  Q
    ||||| || |||||||||||||||  ||||||  |||||||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||||||||||    
T  14566395 ctctaaaatcttctagaaaccgccataaatacgtaaatacccctattacttggagaataagaaaccaaaacccaagtccatagaaggctataaataccac 14566296  T
Q  143 ccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    ||||||||||| |||||  |||| ||| ||||||  ||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  14566295 ccttgagaacaatctcaaggatcgaatgatcagtctaaaccctagtatatgattcttagccctagaatctcttattgtacttttt 14566211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 14561211 - 14561027
Alignment:
Q  43 ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccac 142  Q
    ||||| || |||||||||||||||  ||||||  |||||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  14561211 ctctaaaatcttctagaaaccgccataaatacgtaaatacccctattacttggagaataagcaaccaaaacccaagtccatagaaggctataaataccac 14561112  T
Q  143 ccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    ||| |||||||||||||  |||| ||| ||||||  ||||||||||||| |||||||| ||||| |||| ||||||||| |||||    
T  14561111 cctcgagaacactctcaaggatcgaatgatcagtctaaaccctagtatatgattcttagccctaaaatctcttattgtatttttt 14561027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 240
Target Start/End: Complemental strand, 10776996 - 10776810
Alignment:
Q  54 tctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaaca 153  Q
    |||||||||| ||| ||||||| |||||||||||||||||| || ||||||||||||   |||||||||||||||| |||||||||||||||||||||||    
T  10776996 tctagaaaccaccctaaatacataaatacccctattacttggaggctaagcaaccaaggcccaagcccatagaaggttataaataccacccttgagaaca 10776897  T
Q  154 ctctcaga-gatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacagat 240  Q
    |||| ||| ||   |||| ||||| ||||||||| || || |||||||||||||||||||||  ||||||||||||||| ||||||||    
T  10776896 ctct-agaggaggaaatattcagtcaaaaccctaatagacaattcttaaccctagaatcctttctgtactttttctgcaagtacagat 10776810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 10813143 - 10812992
Alignment:
Q  43 ctctagaaccttctagaaaccgcc-caaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatacca 141  Q
    |||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||     
T  10813143 ctctagaatcttctagaaatcgcctctaaatacataaatacccctattacttgaagactaagaaaccaaaacccaagcccatagaaggctataaataccg 10813044  T
Q  142 cccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||||||| ||||||||  |||||||||||| |  |||||||||||||||    
T  10813043 cccttgagaatactctcaggtatccaataatcaatctaaaaccctagtatac 10812992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 38700143 - 38700317
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||| ||||||||| | ||||||||||||  |||||||||||||||  ||||||  |||||||||||||||||| ||||||||||||||||| |||||||    
T  38700143 ccatggcgccgcctcaataacctctagaatgttctagaaaccgcccttaaatacgtaaatacccctattacttggagactaagcaaccaaaacccaagcc 38700242  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacga 194  Q
    ||||  |||||||||||||||||||| ||||||||||||   ||| ||||||||||  |||||||||||||||||    
T  38700243 cataagaggctataaataccacccttaagaacactctcacctatcgaataatcagtctaaaaccctagtatacga 38700317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 44 - 238
Target Start/End: Complemental strand, 14789859 - 14789662
Alignment:
Q  44 tctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccat-agaaggctataaatacca 141  Q
    ||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||   ||||||||||||| |||||||||| ||||||||||||||||||    
T  14789859 tctagaatcttctagaaaccgcccttaaatacgtaaatacccctattacttgaaagttaagcaaccaaaacccaagcccataagaaggctataaatacca 14789760  T
Q  142 cccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
     | ||||||| |||||||   |||||||||||||  |||||| |||| | ||||||||| ||||||||||||||||  |||| ||||||||| ||||||    
T  14789759 tcgttgagaagactctcatctatccaataatcagtctaaaaatcctaatttacgattctcaaccctagaatccttaccgtac-ttttctgcaagtacag 14789662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 15417785 - 15417916
Alignment:
Q  107 ccaaaatccaagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccct 205  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||   |||||||| |||||  ||||||||| ||||||||||||||||||    
T  15417785 ccaaaacccaagcccatagaaggttataaataccacccttgagaacactctcaagtatccaatagtcagtctaaaaccctaatatacgattcttaaccct 15417884  T
Q  206 agaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||||||||||  |||||||| ||||||    
T  15417885 agaatccttattgtac-ctttctgcaagtacag 15417916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 238
Target Start/End: Complemental strand, 19767811 - 19767616
Alignment:
Q  46 tagaaccttctagaaaccgccc--aaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacc 143  Q
    ||||| ||||||||||||||||  ||| |||| ||||||||||||||||| ||  ||||| |||  ||| |||||||||||||||||||||||||||| |    
T  19767811 tagaatcttctagaaaccgcccccaaagtacataaatacccctattacttaaacgctaagtaactgaaacccaagcccatagaaggctataaataccatc 19767712  T
Q  144 cttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtactttttctgcatgtacag 238  Q
    |||||||| ||||||    ||| ||||||||||  |||||||||  ||| |||||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  19767711 cttgagaagactctcgattatcgaataatcagtctaaaaccctaagatatgattcttaaccctataatcccttattgtac-ttttctgcaagtacag 19767616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 10816039 - 10815893
Alignment:
Q  43 ctctagaaccttctagaaaccgcc-caaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatacca 141  Q
    |||||||| |||||||||| |||| | ||||||| |||||||     |||||| |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  10816039 ctctagaatcttctagaaatcgcctctaaatacataaatacc-----tacttggagactaagcaactaaaacccaagtccatagaaggctataaatacca 10815945  T
Q  142 cccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||||||||||||||||  |||||||||||| |  |||||||||||||||    
T  10815944 cccttgagaacactctcaggtatccaataatcaatctaaaaccctagtatac 10815893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 12206830 - 12206649
Alignment:
Q  47 agaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccaccctt 146  Q
    |||| |||||| |||||||| |||||||  ||||| |||| || |||| || | ||||||    || ||||||||| || | ||| |||||||||| ||     
T  12206830 agaagcttctataaaccgcctaaaatactaaaatatccctgttgcttggaggccaagcaatagtaacccaagcccacagcaagctttaaataccactcta 12206731  T
Q  147 gagaacactctcagagatccaataat-cagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||| || |||||  ||||||| ||| ||||  |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  12206730 gagatcattctcaaggatccaagaattcagtctaaaccctaatatacgattcttaaccctagaatcccttattgtacttttt 12206649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 14429821 - 14429984
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||||||||||||||||||||||  |||||||||| || |||| |  | ||||||    |  ||||||||| || |||||||||||||||| ||| |||     
T  14429821 cttctagaaaccgcccaaaatacctaaatacccctgttgcttggaagccaagcaatagtagcccaagcccacagcaggctataaataccactctttagat 14429920  T
Q  152 cactctcagag-atccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcctt 214  Q
    || ||| |  | ||||||||||||||  |||||||||| |||||||||||| | ||||||||||    
T  14429921 cattctaaaggcatccaataatcagtctaaaccctagtttacgattcttaatcttagaatcctt 14429984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 12209250 - 12209061
Alignment:
Q  39 taacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaata 138  Q
    ||||||| |||| |||||| |||||||| |||||||  ||||| |||| || |||| || | || |||    || ||| ||||| || | ||||||||||    
T  12209250 taacctcaagaagcttctataaaccgcctaaaatactaaaatatccctgttgcttggaggccaatcaatagtaacccatgcccacagcatgctataaata 12209151  T
Q  139 ccacccttgagaacactctcagagatccaataat-cagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||| || |||| || |||||  ||||||| ||| ||||  |||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  12209150 ccactctagagatcattctcaaggatccaagaattcagtctaaaccctaatatacgattcctaaccctagaatcccttattgtacttttt 12209061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 212
Target Start/End: Original strand, 14433306 - 14433467
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||||| |||||| |||||||||  |||||||||| || |||| |  | |||||||   |  ||||||||| || |||||||||||||||| ||| |||     
T  14433306 cttctaaaaaccgaccaaaatacctaaatacccctgttgcttggaagccaagcaacagtagcccaagcccacagcaggctataaataccactctttagat 14433405  T
Q  152 cactctcagag-atccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcc 212  Q
    || ||| |  | ||||||||||||||  |||||||||| |||||||||||| ||||||||||    
T  14433406 cattctaaaggcatccaataatcagtctaaaccctagtttacgattcttaatcctagaatcc 14433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 54110948 - 54110995
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  54110948 aaccctagtatacgattcttaaccctagaatcccttattgtacttttt 54110995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 5195580 - 5195630
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgc 230  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  5195580 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgc 5195630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 33481068 - 33481011
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| |||||||||||||||||||||| |||  |||||||||||||| |||||    
T  33481068 aaccctagtctacgattcttaaccctagaatctttaccgtactttttctgcaagtaca 33481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 2689138 - 2689196
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||||||| || ||||||    
T  2689138 aaccctaatctacgattcttaaccctagaatccttaccgtactttttctacaagtacag 2689196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 33484858 - 33484800
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| |||||||||||||||||||||| |||   ||||||||||||| ||||||    
T  33484858 aaccctagtctacgattcttaaccctagaatctttaccatactttttctgcaagtacag 33484800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 2692813 - 2692870
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||||||| || |||||    
T  2692813 aaccctaatctacgattcttaaccctagaatccttaccgtactttttctacaagtaca 2692870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 19790105 - 19790162
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||| ||| |||||||||||||||||||| |||  |||||||||||||| |||||    
T  19790105 aaccctaatatgcgattcttaaccctagaatctttaccgtactttttctgcaagtaca 19790162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 20012499 - 20012431
Alignment:
Q  162 gatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgc 230  Q
    ||||||||| | |||  |||||||| || ||||||||||||||||||||| |||  |||||||||||||    
T  20012499 gatccaatattgagtctaaaccctaatagacgattcttaaccctagaatctttaccgtactttttctgc 20012431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 19777269 - 19777222
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtacaga 239  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||    
T  19777269 cgattcttaaccctagaatctttaccgtactttttctgcaagtacaga 19777222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 20008661 - 20008610
Alignment:
Q  179 aaaccctagtatacgattcttaaccctagaatccttattgtactttttctgc 230  Q
    |||||||| || ||||||||||||||||||||| |||  |||||||||||||    
T  20008661 aaaccctaatagacgattcttaaccctagaatctttaccgtactttttctgc 20008610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 11133993 - 11133947
Alignment:
Q  191 acgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||| ||||||||||||||  |||||||||||||| |||||    
T  11133993 acgattcttagccctagaatccttaccgtactttttctgcaagtaca 11133947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 11137225 - 11137180
Alignment:
Q  193 gattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||    
T  11137225 gattcttagccctagaatccttaccgtactttttctgcaagtacag 11137180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 7531 - 7730
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccataga 126  Q
    |||||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7531 gcgccgccttactagcctctagaatcttctagaaaccgcgctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccataga 7630  T
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
     ||||||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7631 gggctataaataccacccttgagaacactctcatctatccaataatcagtctaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 7730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 1e-75; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 19749484 - 19749706
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcc 115  Q
    |||| |||||||||||||| |||||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| | ||    
T  19749484 cattacccatagcgccgccatactaatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagaccc 19749583  T
Q  116 aagcccatagaaggctataaataccacccttgagaacactctcagag-atccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcctt 214  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||| ||||| ||||||||| || ||||||||||||||||||||||||    
T  19749584 aagcccatagaaggctataaataccacctttgagaacactctc-gagtatctaatattcagtcaaaaccctaatagacgattcttaaccctagaatcctt 19749682  T
Q  215 attgtactttttctgcatgtacag 238  Q
    ||||||||||||||||| ||||||    
T  19749683 attgtactttttctgcaagtacag 19749706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 19751710 - 19751931
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcc 115  Q
    |||| |||||||||||||| |||||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||| |||||| | ||    
T  19751710 cattacccatagcgccgccatactaatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagaaaccaagaccc 19751809  T
Q  116 aagcccatagaaggctataaataccacccttgagaacactctcagag-atccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcctt 214  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||| ||||||||| || ||||||||||||||||||||||||    
T  19751810 aagcccatagaaggctataaataccacctttgagaacactctc-gagtatccaatattcagtcaaaaccctaatagacgattcttaaccctagaatcctt 19751908  T
Q  215 attgtactttttctgcatgtaca 237  Q
    ||||||||||||||||| |||||    
T  19751909 attgtactttttctgcaagtaca 19751931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 40 - 238
Target Start/End: Complemental strand, 15158218 - 15158020
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||||||||||||||||||| ||||  |  |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  15158218 aacctctagaaccttctagaaaccgccgaaaaggcctaaattcccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatac 15158119  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||||||||||||||   ||||||||  ||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15158118 cacccttgagaacactctcaagtatccaatatacagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacag 15158020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 12020386 - 12020180
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||||| ||| || | | ||||||||  ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  12020386 cccatagcgctgccataatgatctctagaatattctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcc 12020287  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattg 218  Q
    |||||||||||||||||||||||||||||||||||||||   ||| |||||||||  |||||||| ||| ||||||||||||||||||||||||||||||    
T  12020286 catagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaaccatagaatacgattcttaaccctagaatccttattg 12020187  T
Q  219 tactttt 225  Q
    |||||||    
T  12020186 tactttt 12020180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 40 - 231
Target Start/End: Complemental strand, 15142792 - 15142601
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||||||||||||||||| ||||||  |  |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  15142792 aacctctagaaccttctagaaaccgtccaaaaggcctaaatacccttattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatac 15142693  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgca 231  Q
    |||||||||||||||||| |   ||||||||  ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15142692 cacccttgagaacactcttaagtatccaatatacagtctaaaccctaatatacgattcttaaccctagaatccttattgtactttttctgca 15142601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 225
Target Start/End: Original strand, 20442480 - 20442685
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    ||||| ||| ||| |||||| |||||||| ||||||||| |||||| ||||||  |||| ||||||||||||| | ||||||||||||||| |||||| |    
T  20442480 ccatatcgctgccatactaatctctagaaacttctagaagccgccctaaatacttaaatgcccctattacttggaaactaagcaaccaaaacccaagctc 20442579  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgt 219  Q
    ||||||||||||||||||||||||||||||||||||||   ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  20442580 atagaaggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaaccctagtatacgattcttaaccctagaatccttattgt 20442679  T
Q  220 actttt 225  Q
    ||||||    
T  20442680 actttt 20442685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 20514355 - 20514546
Alignment:
Q  36 tactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataa 135  Q
    |||||| |||||||| ||||||||| |||||| ||||||  |||| ||||||||||||| | | ||||||||||||| |||||| |||||||||||||||    
T  20514355 tactaatctctagaaacttctagaagccgccctaaatacttaaatgcccctattacttggaaagtaagcaaccaaaacccaagctcatagaaggctataa 20514454  T
Q  136 ataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    ||||||||||||||||||||||||   ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20514455 ataccacccttgagaacactctcaagtatctaataatcagtctaaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 20514546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 24276990 - 24276784
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||||||||| || | | |||| ||| |||||| ||||||||| ||| ||| |||||||||||||||||| ||||||||||||||||| |||| ||    
T  24276990 cccatagcgccgccataatgatctctcgaatcttctaaaaaccgccctaaaaacataaatacccctattacttggagactaagcaaccaaaacccaaacc 24276891  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtat-acgattcttaaccctagaatccttattg 218  Q
    |||||||||||||||||||||||||||||||||||||||   ||| ||||||||||   |||||||||||| ||||||||||||||||||||||||||||    
T  24276890 catagaaggctataaataccacccttgagaacactctcaagtatcgaataatcagtcttaaaccctagtataacgattcttaaccctagaatccttattg 24276791  T
Q  219 tactttt 225  Q
    |||||||    
T  24276790 tactttt 24276784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 24281103 - 24280897
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||||||||| || | | |||||||| ||||| ||||| |||| ||| ||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  24281103 cccatagcgccgccataatgatctctagaatcttctggaaactgccctaaaaacataaatacccctattacttggagactaagcaaccaaaacccaagcc 24281004  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtat-acgattcttaaccctagaatccttattg 218  Q
    |||||||||||||||||| |||||||||||||||| |||   ||| ||||||||||   |||||||||||| ||||||||||||||||||||||||||||    
T  24281003 catagaaggctataaatatcacccttgagaacactttcaagtatcgaataatcagtcttaaaccctagtataacgattcttaaccctagaatccttattg 24280904  T
Q  219 tactttt 225  Q
    |||||||    
T  24280903 tactttt 24280897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 28 - 225
Target Start/End: Original strand, 18433168 - 18433364
Alignment:
Q  28 cgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccataga 126  Q
    |||||||| | ||| |||||||| ||||||||||||||||  ||||||| ||||| |||||||||||| |||||||||||||  || |||||||||||||    
T  18433168 cgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaataaccctattacttggagactaagcaaccggaacccaagcccataga 18433267  T
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    || ||||||||||||||  |||||||||||||||  ||| |||||| |||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  18433268 agactataaataccacc--tgagaacactctcaggtatctaataattagtctaaaacctagtatacgattcttaaccctagaatccttattgtactttt 18433364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 20435384 - 20435185
Alignment:
Q  30 ccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaag 128  Q
    |||||||||||| ||||||||| ||||||||||| |||  ||||||  |||||||  ||||||||| |||||||||||| |||| |||||||||||||||    
T  20435384 ccgccttactaaacctctagaatcttctagaaacagccataaatacctaaatacctttattacttggagactaagcaactaaaacccaagcccatagaag 20435285  T
Q  129 gctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttct 228  Q
    ||||||||||||||| |||||| |          |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  20435284 gctataaataccaccattgagagc----------atccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttct 20435195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 36910610 - 36910420
Alignment:
Q  43 ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccac 142  Q
    |||||||| |||||||||||||||     |||||||||||||||||||||||  ||||||||||||||||  ||||||||   |||||||||||||||||    
T  36910610 ctctagaatcttctagaaaccgcct----tacacaaatacccctattacttggggactaagcaaccaaaactcaagcccacgaaaggctataaataccac 36910515  T
Q  143 ccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    | |||||||||||||||| ||   |||| | | |  |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  36910514 ctttgagaacactctcagggagggaatattgattctaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 36910420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 20194837 - 20195020
Alignment:
Q  39 taacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaata 138  Q
    |||| ||||||| | ||| ||||||||| |||||| ||||||||||||  | ||||  ||  |||||||| |||  ||||||||||| ||||||||||||    
T  20194837 taacttctagaaacctctggaaaccgcctaaaatatacaaatacccctgctgcttggggaacaagcaaccgaaactcaagcccatagcaggctataaata 20194936  T
Q  139 ccacccttgagaacactctcagag-atccaataatcagt--aaaaaccctagtatacgattcttaaccctagaatccttattgt 219  Q
    ||| ||||||||||| |||||  | |||||||| |||||  ||||||||||||| ||||||||||||| |||||||||||||||    
T  20194937 ccagccttgagaacattctcaaggcatccaatattcagtctaaaaaccctagtacacgattcttaaccatagaatccttattgt 20195020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 33295686 - 33295754
Alignment:
Q  159 agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcct-tattgtacttttt 226  Q
    ||||||||||||||||||  ||||||||| ||||||| || |||||||| ||||| |||||| ||||||    
T  33295686 agagatccaataatcagtctaaaccctagaatacgatactgaaccctagtatcctctattgtgcttttt 33295754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 546123 - 546077
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||||||||||||||| |||  |||||||||||||| ||||||    
T  546123 cgattcttaaccctagaatctttaccgtactttttctgcaagtacag 546077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 555408 - 555362
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||||||||||||||| |||  |||||||||||||| ||||||    
T  555408 cgattcttaaccctagaatctttaccgtactttttctgcaagtacag 555362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 19911137 - 19911091
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||||||||||||||| |||  |||||||||||||| ||||||    
T  19911137 cgattcttaaccctagaatctttaccgtactttttctgcaagtacag 19911091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 19913798 - 19913752
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    |||||||||||||||||||| |||  |||||||||||||| ||||||    
T  19913798 cgattcttaaccctagaatctttaccgtactttttctgcaagtacag 19913752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 4222 - 4421
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccataga 126  Q
    |||||||||||||| ||||||||| |||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  4222 gcgccgccttactagcctctagaatcttctagaaatcgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccataga 4321  T
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
     ||||||||||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4322 gggctataaataccacccttgagaacactctcatctatctaataatcagtctaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 4421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 194574 - 194773
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccataga 126  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  194574 gcgccgccttactagcctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccataga 194673  T
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
      ||||||||||||||| |||||||||||||||   ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  194674 gagctataaataccaccattgagaacactctcatctatccaataatcagtctaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 194773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 29603941 - 29603722
Alignment:
Q  20 tcccatagcgccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaag 118  Q
    |||||||  ||||||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||| |    
T  29603941 tcccataaagccgccttaataaacctctagaaccttctagaaaccgcccaaaatacctaaatacccctattacttggagactaagcaaccaaaacccatg 29603842  T
Q  119 cccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttatt 217  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||| |||||| |||||||||| || |||||||| ||||||||||||||||||    
T  29603841 cccatagaaggctataaataccacccttgagaacactctcatctatccaattatcagtcaaaaaccctaatagacgattctgaaccctagaatccttatt 29603742  T
Q  218 gtactttttctgcatgtaca 237  Q
    |||||||||||||| |||||    
T  29603741 gtactttttctgcaagtaca 29603722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 40 - 237
Target Start/End: Complemental strand, 7311024 - 7310827
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  7311024 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatac 7310925  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||||||||||||||  |||||||| |||||  |||||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||    
T  7310924 cacccttgagaacactctcaggtatccaatattcagtctaaaccctaatagacgtttcttaaccctagaatccttattgtactttttctgcaagtaca 7310827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 45278932 - 45279129
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  45278932 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatac 45279031  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||||||||||||||||||| |||| |||||  |||||||| || ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  45279032 cacccttgagaacactctcagagatcgaatattcagtctaaaccctaatagacgattcttaaccctaggatccttattgtactttatctgcaagtaca 45279129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 4876762 - 4876961
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccataga 126  Q
    ||||||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||| ||    
T  4876762 gcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagctcattga 4876861  T
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    |||||||||||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  4876862 aggctataaataccacccttgagaacactctcaagtatctaataatcagtctaaaaccctagtatacgattcttaaccctaaaatctttattgtactttt 4876961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 5771849 - 5772045
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||||||| |||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  5771849 aacctctaga-ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatac 5771947  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||||| ||||||||   |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5771948 cacccttgagagcactctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 5772045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 40 - 206
Target Start/End: Original strand, 45286231 - 45286397
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  45286231 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatac 45286330  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaacccta 206  Q
    |||||||||||||||||||||||||| |||| |||||  |||||||| || ||||||||||||||||    
T  45286331 cacccttgagaacactctcagagatcgaatattcagtctaaaccctaatagacgattcttaacccta 45286397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 40 - 237
Target Start/End: Complemental strand, 26126223 - 26126026
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||| ||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||| |||  |||||||||||||||||||||||||    
T  26126223 aacctctagaatcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaaactcaagcccatagaaggctataaatac 26126124  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||||| ||||||||   || ||||| |||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26126123 cacccttgagagcactctcaagcattcaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 26126026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 23692699 - 23692922
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatc 114  Q
    |||| ||||| ||||||||| |  || |||||||| ||||||||||||||||  ||||||  ||| |||||||||||||| ||||||||||||| ||| |    
T  23692699 cattacccatggcgccgcctcaacaatctctagaatcttctagaaaccgcccctaaatacctaaaaacccctattacttggagactaagcaaccgaaacc 23692798  T
Q  115 caagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatcct 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||  || |||||| ||||||||||||||||||||||||||    
T  23692799 caagcccatagaaggctataaataccacccttgagaacactctcatttatccaatagtcagtctaataccctattatacgattcttaaccctagaatcct 23692898  T
Q  214 tattgtactttttctgcatgtacag 238  Q
    | |||||| ||||||||| ||||||    
T  23692899 tgttgtac-ttttctgcaagtacag 23692922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 23696486 - 23696709
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatc 114  Q
    |||| ||||| ||||||||| |  || |||||||| ||||||||||||||||  ||||||  ||| |||||||||||||| ||||||||||||| ||| |    
T  23696486 cattacccatggcgccgcctcaacaatctctagaatcttctagaaaccgcccctaaatacctaaaaacccctattacttggagactaagcaaccgaaacc 23696585  T
Q  115 caagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatcct 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||  || |||||| ||||||||||||||||||||||||||    
T  23696586 caagcccatagaaggctataaataccacccttgagaacactctcatttatccaatagtcagtctaagaccctaatatacgattcttaaccctagaatcct 23696685  T
Q  214 tattgtactttttctgcatgtacag 238  Q
    | |||||| ||||||||| ||||||    
T  23696686 tgttgtac-ttttctgcaagtacag 23696709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 3071586 - 3071753
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatag 125  Q
    ||||||||| | ||| |||||||| ||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  3071586 gcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccatag 3071685  T
Q  126 aaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||| |||||    
T  3071686 aaggctataaataccacccttgagaacactctcaggtatccaataatcagtctaaaaccctaatatac 3071753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 26120761 - 26120693
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaacc 108  Q
    ||||||||||| ||||||||||||||||||||  |  |||||||||||||||||| |||||||||||||    
T  26120761 aacctctagaatcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaacc 26120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 7395133 - 7395020
Alignment:
Q  127 aggctataaataccacccttgagaacactctcaga-gatccaataatcagt--aaaaaccctagtatacgattcttaaccctagaatccttattgtactt 223  Q
    |||||||||||| | | ||||||| || ||||||| ||||| ||| |||||  |||||||||| | ||||||||||| ||||||||||||||  ||||||    
T  7395133 aggctataaataaccctcttgagatcattctcagaagatccgatattcagtttaaaaaccctaatctacgattcttagccctagaatccttaccgtactt 7395034  T
Q  224 tttctgcatgtaca 237  Q
    |||||||| |||||    
T  7395033 tttctgcaagtaca 7395020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 8164787 - 8164845
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  8164787 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 8164845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 8168720 - 8168778
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  8168720 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 8168778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 26383947 - 26384125
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||| |||||||||| |||||||  |||||| ||| || ||||    | |||||||| ||| |||||||||||| || |||||||||| || |||||||     
T  26383947 cttccagaaaccgcctaaaatacgtaaatacgcctgttgcttgggagccaagcaaccgaaacccaagcccatagcagactataaatactactcttgagat 26384046  T
Q  152 cactctcagag-atccaataatcagta--aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
     | ||||| || || ||||| |||||   |||||||||| ||| |||||||||||||||||| || |||||||||||||    
T  26384047 tattctcaaagcatacaatattcagttctaaaaccctagaatatgattcttaaccctagaatcccctattgtacttttt 26384125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 8998178 - 8998236
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| |||||||||||||||||||||| |||  |||||||||||||| ||||||    
T  8998178 aaccctagtctacgattcttaaccctagaatctttaccgtactttttctgcaagtacag 8998236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 41325909 - 41325812
Alignment:
Q  141 acccttgagaacactctcagagatccaataatcagta-aaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||||||||||||||  ||| |||| | |||  ||||  ||| || |||||||| |||||||||||| ||||| ||||||||||||| |||||    
T  41325909 acccttgagaacactctcaggtatctaatatttagtctaaaattctaatagacgattctgaaccctagaatctttattatactttttctgcaagtaca 41325812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 9002102 - 9002159
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| |||||||||||||| ||||||| ||   |||||||||||||| |||||    
T  9002102 aaccctagtctacgattcttaaccatagaatctttcccgtactttttctgcaagtaca 9002159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 2218632 - 2218544
Alignment:
Q  125 gaaggctataaataccacccttgagaacactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcc 212  Q
    ||||||||||||||| |||||||||| || |||| ||  |||||||||||| |  || |||||| |||||||  |||||||||| ||||    
T  2218632 gaaggctataaatacaacccttgagagcattctcaaggcatccaataatcaatctaatccctagaatacgatatttaaccctagtatcc 2218544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 28 - 238
Target Start/End: Original strand, 78657 - 78867
Alignment:
Q  28 cgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||| || ||| |||||||| ||||||||| |||||| ||||||  ||||  |||||||||||| ||||||||||||||||| ||||||||||||||    
T  78657 cgccgccatattaatctctagaaacttctagaagccgccctaaatacttaaatgtccctattacttggagactaagcaaccaaaacccaagcccatagaa 78756  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  78757 ggctataaataccacccttgagaacactctcaagtatctaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttactgtactttttg 78856  T
Q  228 tgcatgtacag 238  Q
    |||| ||||||    
T  78857 tgcaagtacag 78867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 9e-70; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 23532676 - 23532453
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcc 115  Q
    |||| ||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||| ||| ||    
T  23532676 cattacccatagcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaataccactattacttggagactaagcaaccgaaaccc 23532577  T
Q  116 aagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatcct 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||  || |||||||| || |||||||||||||||||||||||    
T  23532576 aagcccatagaaggctataaataccacccttgagaacactctcaagcatccaatagtcagtctataaaccctaatagacgattcttaaccctagaatcct 23532477  T
Q  214 tattgtactttttctgcatgtacag 238  Q
    |||||||| ||||||||| ||||||    
T  23532476 tattgtac-ttttctgcaagtacag 23532453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 225
Target Start/End: Original strand, 11544703 - 11544908
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    ||||||||||| || || | | |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  11544703 cccatagcgccaccataatgatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcc 11544802  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgt 219  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||  |||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  11544803 catagaaggctataaataccacccttgggaacactctcaaggatctgataatcagtctaaaatcctagtatacgattcttaaccctagaatccttattgt 11544902  T
Q  220 actttt 225  Q
    ||||||    
T  11544903 actttt 11544908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 225
Target Start/End: Original strand, 11527298 - 11527503
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    ||||||||||| || || | | |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  11527298 cccatagcgccaccataatgatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcc 11527397  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgt 219  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||  |||||||||  ||||||||||||||||||||||||| ||| ||||||||||||    
T  11527398 catagaaggctataaataccacccttgggaacactctcaaggatctgataatcagtctaaaaccctagtatacgattcttaacactataatccttattgt 11527497  T
Q  220 actttt 225  Q
    ||||||    
T  11527498 actttt 11527503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 44356976 - 44357193
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||| ||||||  ||||||||  ||||| ||||||||| ||||||| |||||||||||||| ||| ||||||||||||||| | ||||||||    
T  44356976 catatcgccgccatactaaatctctagaaatttctataaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagccc 44357075  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattgt 219  Q
    |||||||||||||||||||||||||||||||| |||||   ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  44357076 atagaaggctataaataccacccttgagaaca-tctcaagtatctaataatcagtctaaaaaccctagtatacgattcttaaccctagaatccttattgt 44357174  T
Q  220 actttttctgcatgtacag 238  Q
    ||||||| |||| ||||||    
T  44357175 actttttatgcaagtacag 44357193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 37 - 214
Target Start/End: Complemental strand, 15932428 - 15932250
Alignment:
Q  37 actaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaa 136  Q
    ||||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||    
T  15932428 actaatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagcccataaaaggctataaa 15932329  T
Q  137 taccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatcctt 214  Q
    |||||||||||||||||||||||   ||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  15932328 taccacccttgagaacactctcaagtatccaataatcagtctaaaaccctaatatacgattcttaaccctagaatcctt 15932250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 238
Target Start/End: Original strand, 44360128 - 44360315
Alignment:
Q  54 tctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaaca 153  Q
    |||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  44360128 tctagaaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaaca 44360227  T
Q  154 ctctcagagatccaataatcagt---aaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||   ||| ||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  44360228 ctctcaagtatctaataatcagtctaaaaacccctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacag 44360315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 11100124 - 11100291
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatag 125  Q
    ||||||||| | ||| |||||||| ||||||||||||||||  ||||||| ||||||||||||||||||  | ||||| |||  ||| ||||||||||||    
T  11100124 gcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttgggggctaagtaactgaaacccaagcccatag 11100223  T
Q  126 aaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||   ||||||||||||||    
T  11100224 aaggctataaataccacccttgggaacactctcaggtatccaataatcagtctgaaaccctagtatac 11100291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 23522445 - 23522322
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcc 115  Q
    |||| |||||| || ||||||| ||| |||||||| |||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||| ||| ||    
T  23522445 cattacccataacgtcgccttaataatctctagaatcttctagaaacctccctaaatacataaatacccctattacttggagactaagcaaccgaaaccc 23522346  T
Q  116 aagcccatagaaggctataaatac 139  Q
    || |||||||||||||||||||||    
T  23522345 aaacccatagaaggctataaatac 23522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 43173584 - 43173402
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| |||||||||   ||| |||||||| ||| ||||| ||||| ||||||||||||||| |||||| ||| | ||| |||||||| ||| |||||| |    
T  43173584 ccatggcgccgcctcgataatctctagaatcttatagaatccgcctaaaatacacaaatactcctattgcttaaggaccaagcaaccgaaacccaagctc 43173485  T
Q  122 atagaaggctataaataccacccttgagaacactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaacc 203  Q
    |||  |||||||||||||||||||||||| ||  ||| ||  ||||||||||||||  ||||||||| ||||||| |||||||    
T  43173484 ataacaggctataaataccacccttgagagcatcctcaaggcatccaataatcagtctaaaccctagaatacgatacttaacc 43173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 9214715 - 9214540
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||||||||||| |||||| |||  |||||||| | || |||| | || ||||||| | |  ||||||||| || | |||||||||||||| |||||||     
T  9214715 cttctagaaaccacccaaagtacctaaatacccatgttgcttggaaaccaagcaacaagagcccaagcccacagcatgctataaataccactcttgagat 9214616  T
Q  152 cactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    || |||||  ||||  |||||||||  |||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  9214615 cattctcaaggatcggataatcagtctaaaccctagtttacgattcttaaccctagaatctcttattgtgcttttt 9214540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 18016850 - 18017032
Alignment:
Q  47 agaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccaccctt 146  Q
    |||| ||| ||||||||||| |||||||| |||||||| | || ||||    | |||||||||||| |||||||||||| |||||||| |||| |  |||    
T  18016850 agaagcttatagaaaccgcctaaaatacataaatacccttgttgcttgggagccaagcaaccaaaacccaagcccatagcaggctatatatactaatctt 18016949  T
Q  147 gagaacactctc-agagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||| || |||| ||  ||||||||||||||  ||||| || |||||| ||||||||||||||||| ||||||||||||||||    
T  18016950 gagatcattctcaaggcatccaataatcagtctaaaactctggtatacaattcttaaccctagaatcccttattgtacttttt 18017032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 23517934 - 23517841
Alignment:
Q  134 aaataccacccttgagaacactctcagagatccaataatcagt--aaaaaccctagtatacgattcttaaccctagaatccttattgtactttt 225  Q
    |||||| |||||||||||||||||||   |||||||| |||||  |||||||||| || ||||||||||||||||||||||||||| |||||||    
T  23517934 aaatacgacccttgagaacactctcaagcatccaatagtcagtctaaaaaccctaatagacgattcttaaccctagaatccttattatactttt 23517841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 6201929 - 6202106
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    ||||||||||||||| |||||||  ||||| |||||||  ||| |  | |||||||   || |||||||||||| ||||||||||||| || || ||||     
T  6201929 cttctagaaaccgcctaaaatacctaaatatccctattggttggaagccaagcaacagtaacccaagcccatagcaggctataaatactactctggagat 6202028  T
Q  152 cactctc-agagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    || |||| ||  ||||||||||||||  ||||||||| |||||||||| |||||||| |||| |||||||||||||||    
T  6202029 cattctcaaggtatccaataatcagtctaaaaccctaatatacgattcataaccctataatctcttattgtacttttt 6202106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 11734943 - 11735044
Alignment:
Q  130 ctataaataccacccttgagaacactctcagag-atccaataatcagta--aaaaccctagtatacgattcttaaccctagaat-ccttattgtactttt 225  Q
    ||||||||||||| ||||||| |||| |||  | ||||||||||||||   |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  11734943 ctataaataccactcttgagatcactatcaaggcatccaataatcagttctaaaaccctagaatacgattcttaaccctagaatcccttattgtgctttt 11735042  T
Q  226 tc 227  Q
    ||    
T  11735043 tc 11735044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 12529427 - 12529369
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  12529427 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 12529369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 12538478 - 12538420
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  12538478 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 12538420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 205
Target Start/End: Original strand, 9066367 - 9066516
Alignment:
Q  57 agaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacactc 156  Q
    |||||||||| |||||||| |||||||| | || ||||    | |||||||| ||| |||||||||||| ||||||||||||| || ||||||| || ||    
T  9066367 agaaaccgcctaaaatacataaataccctttttgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatactactcttgagatcattc 9066466  T
Q  157 tc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccct 205  Q
    || ||  |||||||||||| |  ||||||||| ||||||| |||| ||||    
T  9066467 tcaaggcatccaataatcaatctaaaccctagaatacgatacttagccct 9066516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 21627496 - 21627553
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||    
T  21627496 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtaca 21627553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 37278719 - 37278662
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  37278719 aaccctagtctacgattcttaaccctagaatccttatcgtactttttttgcaagtaca 37278662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 30096662 - 30096850
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||| |||| ||||||||||||||| ||||||   ||||| ||||||| |||| |  | | ||||    |||||||||||| |  ||  |||||||||    
T  30096662 aacctccagaagcttctagaaaccgcctaaaatattaaaatatccctattgcttggaagccacgcaatagtaatccaagcccacatcagattataaatac 30096761  T
Q  140 cacccttgagaacactctcagagatccaataatcagta-aaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    ||| || |||| || | ||||  |||| |||||||||  ||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  30096762 cactctagagatcattttcaggaatccgataatcagtctaaaaccctaatatacgattcttaaccctagaatctcttatcgtacttttt 30096850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 15834990 - 15834932
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| |||||||||||||||||||||| |||  |||||||||||||| ||||||    
T  15834990 aaccctagtctacgattcttaaccctagaatctttaccgtactttttctgcaagtacag 15834932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 15828495 - 15828438
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||| |||||||||||||||||||||| |||  |||||||||||||| |||||    
T  15828495 aaccctagtctacgattcttaaccctagaatctttaccgtactttttctgcaagtaca 15828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 6198717 - 6198832
Alignment:
Q  114 ccaagcccatagaaggctataaataccacccttgagaacactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaat- 210  Q
    ||||||||| || ||||||||||||| || ||||||| || |||||  | || ||||||||| |  ||||||||| |||||||||||||| | ||||||     
T  6198717 ccaagcccacagcaggctataaatactactcttgagatcattctcaaggtattcaataatcactctaaaaccctaatatacgattcttaatcttagaatc 6198816  T
Q  211 ccttattgtacttttt 226  Q
    ||||||||||||||||    
T  6198817 ccttattgtacttttt 6198832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 362147 - 362089
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||| | ||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  362147 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacag 362089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 37282907 - 37282861
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtacttttt 226  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||    
T  37282907 aaccctagtctacgattcttaaccctagaatccttaccgtacttttt 37282861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 30218138 - 30218049
Alignment:
Q  68 aaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacactct 157  Q
    |||||| | ||||||||||||||||||    | |||||||| ||| |||||| ||||| || |||||||||||||||||| || ||||||    
T  30218138 aaaatatataaatacccctattacttgggagccaagcaaccgaaacccaagctcatagcagactataaataccacccttgggagcactct 30218049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 5328217 - 5328170
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtacaga 239  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||    
T  5328217 cgattcttaaccctagaatctttaccgtactttttctgcaagtacaga 5328170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 357416 - 357358
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||| | ||||||||||| ||||||||||||||   ||||||||||||| ||||||    
T  357416 aaccctaatctacgattcttagccctagaatccttaccttactttttctgcaagtacag 357358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 27553255 - 27553181
Alignment:
Q  77 aaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    ||||| |||| ||||||| ||| ||||||||  ||| |||| || |||||| ||||||||||||||| |||||||    
T  27553255 aaatatccctgttacttggagattaagcaactgaaacccaaaccaatagaaagctataaataccaccattgagaa 27553181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 37973417 - 37973372
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||    
T  37973417 cgattcttaaccctagaatctttaccgtactttttctgcaagtaca 37973372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1778 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold1778
Description:

Target: scaffold1778; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 1115 - 911
Alignment:
Q  34 cttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctat 133  Q
    |||| ||| |||||| | |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  1115 cttaataatctctaggatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctat 1016  T
Q  134 aaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatg 233  Q
    ||||||||||||||||||||||||||   |||||||| |||||  |||||||| || ||||||||||||||||||||||||| ||||||||||||||| |    
T  1015 aaataccacccttgagaacactctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttagtgtactttttctgcaag 916  T
Q  234 tacag 238  Q
    |||||    
T  915 tacag 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 26857603 - 26857380
Alignment:
Q  16 catttcccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcc 115  Q
    |||| |||||||| |||||||| ||| |||||||| |||||||||||||||| ||||||  |||| ||||||||||||| ||| ||||||||||||| ||    
T  26857603 cattacccatagcaccgccttaataatctctagaatcttctagaaaccgccctaaatacctaaatccccctattacttggagattaagcaaccaaaaccc 26857504  T
Q  116 aagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcctta 215  Q
    |||||||||||||||||||||||||||||||||| |||||||||   |||||||| |||||  |||||||| || |||||||||||||||||||||||||    
T  26857503 aagcccatagaaggctataaataccacccttgaggacactctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatcctta 26857404  T
Q  216 ttgtactttttctgcatgtacaga 239  Q
     ||||||||||||||| |||||||    
T  26857403 ctgtactttttctgcaagtacaga 26857380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 8460138 - 8460345
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||||||||| || | | || ||||| |||||||||||| ||| ||||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  8460138 cccatagcgccgccataatgatctttagaatcttctagaaaccaccctaaatacataaatacccctattacttggagactaagaaaccaaaacccaagcc 8460237  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattg 218  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||| ||||||||||||||||||||||| ||||||||    
T  8460238 catagaaggctataaataccacccttgagaacactctcagatatccaataatgagtctaaaaccctaatatacgattcttaaccctagaataccttattg 8460337  T
Q  219 tacttttt 226  Q
    ||||||||    
T  8460338 tacttttt 8460345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 38836734 - 38836944
Alignment:
Q  29 gccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    |||||||||||||  ||||||||||||||||| | ||||||||||||  |||||||||||||||||| |||||||||||  |||| |||||||||||||     
T  38836734 gccgccttactaaaactctagaaccttctagagatcgcccaaaatacctaaatacccctattacttggagactaagcaataaaaacccaagcccatagag 38836833  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||| ||||||||||| ||||||||| ||   ||| ||||||  |||||||| || ||||||||||||||||||||| |||||||||||||||    
T  38836834 ggctataaatatcacccttgagagcactctcagggagggaattatcagtctaaaccctaatagacgattcttaaccctagaatcattattgtactttttc 38836933  T
Q  228 tgcatgtacag 238  Q
    |||| ||||||    
T  38836934 tgcaagtacag 38836944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 29 - 237
Target Start/End: Original strand, 38840653 - 38840862
Alignment:
Q  29 gccgccttactaac-ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    |||||||||||||  ||||||||||||||||| | ||||||||||||  ||||| || ||||||||| ||||||||||| ||||| ||||| |||||||     
T  38840653 gccgccttactaaaactctagaaccttctagagatcgcccaaaatacctaaatatccttattacttggagactaagcaatcaaaacccaagtccatagag 38840752  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||| ||||||||||||||||||||| ||   ||| ||||||  |||||||| || ||||||||||||||||||||| |||||||||||||||    
T  38840753 ggctataaatatcacccttgagaacactctcagggagggaattatcagtctaaaccctaatagacgattcttaaccctagaatcattattgtactttttc 38840852  T
Q  228 tgcatgtaca 237  Q
    |||| |||||    
T  38840853 tgcaagtaca 38840862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 40936593 - 40936790
Alignment:
Q  43 ctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatacca 141  Q
    |||||||| |||||||||| |||| | ||||||| |||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||    
T  40936593 ctctagaatcttctagaaatcgcctataaatacataaatacccctattacttggaggctaagcaacaaaaacccaagcccatagaaggctataaatacca 40936692  T
Q  142 cccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtactttttctgcatgtaca 237  Q
    |||||||||||| |||||   ||||||||||||||  ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||| |||||    
T  40936693 cccttgagaacagtctcaagtatccaataatcagtctaaaaccctaatatactattcttaaccctataatcccttattgtactttttctgcaagtaca 40936790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 40933198 - 40933396
Alignment:
Q  43 ctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatacca 141  Q
    |||||||| |||||| ||| |||| | ||||||| |||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  40933198 ctctagaaacttctaaaaatcgcctataaatacataaatacccctattacttggaggctaagcaaccaaaacccaagcccatagaaggctataaatacca 40933297  T
Q  142 cccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaa-tccttattgtactttttctgcatgtacag 238  Q
    |||||||||||||||| |   ||||||||||||||  |||||||||  |||| ||||||||||||| || |||||||||||||||||||||| ||||||    
T  40933298 cccttgagaacactcttaagtatccaataatcagtctaaaaccctaacatactattcttaaccctataattccttattgtactttttctgcaagtacag 40933396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 26863816 - 26863639
Alignment:
Q  46 tagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccaccct 145  Q
    ||||| |||||||||||||||| ||||||  |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  26863816 tagaatcttctagaaaccgccctaaatacctaaatacccctattacttggagattaagcaaccaaaacccaagcccatagaaggctataaataccaccct 26863717  T
Q  146 tgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgca 231  Q
    |||| |||||||        ||||| |||||  |||||||| || ||||||||||||||||||||||||| |||||||||| ||||    
T  26863716 tgaggacactct--------caatattcagtccaaaccctaatagacgattcttaaccctagaatccttactgtactttttatgca 26863639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 20680291 - 20680114
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    |||| |||||||||| |||||||| ||||||||||  | ||||    | |||||||| ||| |||||||||||| ||||||||||||| || |||||||     
T  20680291 cttccagaaaccgcctaaaatacataaatacccctgctgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatactactcttgagat 20680192  T
Q  152 cactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || |||||  | ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20680191 cattctcaaggcatccaataatcagtctaaaaccctagtatacgattcttaaccctagaatcccttattgtacttttt 20680114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 27073696 - 27073866
Alignment:
Q  59 aaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacactctc 158  Q
    |||||||| ||||||||||||||||||| || ||||  ||  |||||||| ||| | ||| |||||| || ||||||||||||||||||||| || ||||    
T  27073696 aaaccgcctaaaatacacaaatacccctgttgcttggggatcaagcaaccgaaacctaagtccatagcagactataaataccacccttgagagcattctc 27073795  T
Q  159 -agagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
     ||  ||| ||||||||||  |||| |||||||||||||| |||||| |||||| ||||||||||||||||    
T  27073796 aaggcatctaataatcagtctaaaaacctagtatacgatttttaaccttagaatcccttattgtacttttt 27073866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 32965751 - 32965840
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatcca 116  Q
    ||||||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |||| ||||    
T  32965751 gcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaatcaaagtcca 32965840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 19049830 - 19049649
Alignment:
Q  47 agaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccaccctt 146  Q
    |||||||||| ||| ||||| ||||||||||||| || ||||| ||||  ||| |||||||| ||| |||||||||||  | |||||||||||||| |||    
T  19049830 agaaccttctggaacccgcctaaaatacacaaatgcctctattgcttggggaccaagcaaccgaaacccaagcccataacatgctataaataccactctt 19049731  T
Q  147 gagaacactctc-agagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||| || |||| ||  ||| ||||| || |  ||||||||| ||||||| |||| |||||| || ||||||||| ||||||    
T  19049730 gagagcattctcaaggtatcaaataaccaatctaaaccctagaatacgatacttagccctagtatcccttattgtgcttttt 19049649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 20675543 - 20675366
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    ||||||||||||||  |||||||| |||||||| |  | ||||    | |||||||| ||| ||||||||| |  ||||||||||||| || |||||||     
T  20675543 cttctagaaaccgcgtaaaatacataaatacccatgctgcttgggagccaagcaaccgaaacccaagcccagaacaggctataaatactactcttgagat 20675444  T
Q  152 cactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    || |||||  | |||||||||| ||   ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20675443 cattctcaaggcatccaataataagactaaaaccctagtatacgattcttaaccctagaatcccttattgtacttttt 20675366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 2260916 - 2260976
Alignment:
Q  242 tcatgccactgttgggccttctaagggagccaacattggtgagaatagtgtcaaactctct 302  Q
    ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  2260916 tcatgccactgttgggccttctaagggagccaacactggtgtggatagtgtcaaactctct 2260976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 37257077 - 37256962
Alignment:
Q  114 ccaagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaa-ccctagaatc 211  Q
    ||||||||| || || ||||||||||||| || |||| || ||||||| |||||||||||||| | |||||||| |||||||||||||| ||||||||||    
T  37257077 ccaagcccaaagcagactataaataccactctagagatcattctcagatatccaataatcagtcataaaccctaatatacgattcttaacccctagaatc 37256978  T
Q  212 -cttattgtacttttt 226  Q
     | |||||||||||||    
T  37256977 acctattgtacttttt 37256962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 20675745 - 20675696
Alignment:
Q  178 aaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20675745 aaaaccctagtatacgattcttaaccctagaatcccttattgtacttttt 20675696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 35415777 - 35415835
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||| |||| ||||||    
T  35415777 aaccctagtctacgattcttaaccctagaatccttaccgtactttttttgcaagtacag 35415835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 20671208 - 20671143
Alignment:
Q  163 atccaataatcagtaaaa-accctagtatacgattcttaaccctagaatcc-ttattgtacttttt 226  Q
    ||||||||||||||  || ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  20671208 atccaataatcagtctaagaccctagtatacgattcttaaccttagaatccattattgtacttttt 20671143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 43041963 - 43042020
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||| | ||||||||||||||||||||||||||  |||||||||||||| |||||    
T  43041963 aaccctattctacgattcttaaccctagaatccttaccgtactttttctgcaagtaca 43042020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 12722432 - 12722471
Alignment:
Q  120 ccatagaaggctataaataccacccttgagaacactctca 159  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  12722432 ccatagaaggctataaatacaacccttgagagcactctca 12722471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 12783914 - 12783953
Alignment:
Q  120 ccatagaaggctataaataccacccttgagaacactctca 159  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  12783914 ccatagaaggctataaatacaacccttgagagcactctca 12783953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 40569456 - 40569411
Alignment:
Q  192 cgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||    
T  40569456 cgattcttaaccctagaatctttaccgtactttttctgcaagtaca 40569411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 20817633 - 20817677
Alignment:
Q  115 caagcccatagaaggctataaataccacccttgagaacactctca 159  Q
    |||||||||||| |||||||||||| |||||||||| || |||||    
T  20817633 caagcccatagagggctataaatacaacccttgagagcattctca 20817677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 22 - 238
Target Start/End: Complemental strand, 13165 - 12948
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagccc 121  Q
    |||| ||||||||| ||||| ||||| || |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||    
T  13165 ccatggcgccgcctcactaatctctaaaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagccc 13066  T
Q  122 atagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatccttattgta 220  Q
    |||| |||||||||||||||||||||||||||||||||   |||||| ||| |||  |||||||||| |||||||||| |||||||||||||||||||||    
T  13065 ataggaggctataaataccacccttgagaacactctcatctatccaagaattagtctaaaaccctagcatacgattctcaaccctagaatccttattgta 12966  T
Q  221 ctttttctgcatgtacag 238  Q
    |||||| |||| ||||||    
T  12965 ctttttttgcaagtacag 12948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 14011 - 13808
Alignment:
Q  29 gccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||  |||||||| ||||||||| | ||||||||||||||| ||||||||||||||    
T  14011 gccgccttactaaacctctagaaccttctagagatcgcccaaaatacctaaatacccttattacttggatactaagcaaccaaaacccaagcccatagaa 13912  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||||||||||||||| |||||||| | ||| |||| |||||  |||||||| || ||||||||||||||||||||||||||||||||||||     
T  13911 ggctataaataccacccttgagagcactctcaaatatctaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttt 13812  T
Q  228 tgca 231  Q
    ||||    
T  13811 tgca 13808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 29 - 237
Target Start/End: Complemental strand, 10524 - 10315
Alignment:
Q  29 gccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||||||||| |||||||||||||||||| | |||| |||||||  |||||||| ||||||||| | ||||||||||||||| ||||||||||||||    
T  10524 gccgccttactaaacctctagaaccttctagagatcgcctaaaatacctaaatacccttattacttggatactaagcaaccaaaacccaagcccatagaa 10425  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||||||||||| ||| |||||||| | ||| |||| |||||  |||||||| || |||||||||||||||||||||||||||||||||||||    
T  10424 ggctataaataccacccttaagagcactctcaaatatctaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttc 10325  T
Q  228 tgcatgtaca 237  Q
    |||| |||||    
T  10324 tgcaagtaca 10315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 15133 - 14918
Alignment:
Q  29 gccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||||||||| |||||||||||||||||| | || |||||||||  |||||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  15133 gccgccttactaaacctctagaaccttctagagatcgtccaaaatacctaaatacccttattacttggtgactaagcaaccaaaacccaagcccatagaa 15034  T
Q  128 ggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttc 227  Q
    ||||||||||||||||||||||| ||||||||   |||||||| |||||  |||||||| || |||||||||||||||||||||||||||||||||||||    
T  15033 ggctataaataccacccttgagagcactctcaagtatccaatattcagtctaaaccctaatagacgattcttaaccctagaatccttattgtactttttc 14934  T
Q  228 tgcatgtacagatttc 243  Q
    | || |||||| ||||    
T  14933 tacaagtacagttttc 14918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 19132 - 19021
Alignment:
Q  29 gccgccttactaa-cctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaa 127  Q
    ||||||||||||| |||||||||||||||||| | || |||||||||  |||||||| ||||||||| ||||||||||||||||| |||||| |||||||    
T  19132 gccgccttactaaacctctagaaccttctagagatcgtccaaaatacctaaatacccttattacttggagactaagcaaccaaaacccaagctcatagaa 19033  T
Q  128 ggctataaatac 139  Q
    ||||||||||||    
T  19032 ggctataaatac 19021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 43 - 226
Target Start/End: Original strand, 12018 - 12203
Alignment:
Q  43 ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccac 142  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  12018 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaatccaagcccatagaaggctataaataccat 12117  T
Q  143 ccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    ||||||  ||||||||||| ||||||||||||||  ||||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  12118 ccttgaacacactctcagatatccaataatcagtctaaaaccctaatatatgattcttaaccctagaatcccttattgtacttttt 12203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 225
Target Start/End: Original strand, 149857 - 150063
Alignment:
Q  23 catagcgccgccttactaac-ctctagaaccttctagaaacc-gcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||| ||||||| ||||||  |||||||| ||||||||| || |||| ||||||  |||| ||||||||||||| ||||||||||||||||| |||||||    
T  149857 catatcgccgccatactaaatctctagaaacttctagaagcccgccctaaatacttaaatgcccctattacttggagactaagcaaccaaaacccaagcc 149956  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattg 218  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  |||| ||||||||||||||||||||||| ||||||||||||||    
T  149957 catagaaggctataaataccacccttgagaacactctcagatatctaataatcagtctaaataccctagtatacgattcttaaccatagaatccttattg 150056  T
Q  219 tactttt 225  Q
    |||||||    
T  150057 tactttt 150063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 23 - 225
Target Start/End: Original strand, 146650 - 146856
Alignment:
Q  23 catagcgccgccttact-aacctctagaaccttctagaaacc-gcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||| ||||||| |||| || |||||||| ||||||||| || |||| ||||||  |||| ||||||||||||||||||||||||||||||| ||||||     
T  146650 catatcgccgccatactgaatctctagaaacttctagaagcccgccctaaatacttaaatgcccctattacttgaagactaagcaaccaaaacccaagct 146749  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcag--taaaaaccctagtatacgattcttaaccctagaatccttattg 218  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||  ||| |||||||||||||||||    
T  146750 catagaaggctataaataccacccttgagaacactctcagatatctaataatcagtctaaaaaccctagtatacgatatttatccctagaatccttattg 146849  T
Q  219 tactttt 225  Q
    |||||||    
T  146850 tactttt 146856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 1672 - 1466
Alignment:
Q  21 cccatagcgccgccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||||||||||| | || | | |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| |||  ||||||    
T  1672 cccatagcgccgtcataatgatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaactcaagcc 1573  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtat-acgattcttaaccctagaatccttattg 218  Q
    |||||||||||||||||||||||||| ||||||||||||   ||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  1572 catagaaggctataaataccacccttaagaacactctcaagtatctaataatcagtctaaaaccctagtataacgattcttaaccctagaatccttattg 1473  T
Q  219 tactttt 225  Q
    |||||||    
T  1472 tactttt 1466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1505 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 40 - 237
Target Start/End: Complemental strand, 562 - 365
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    ||||||||||| ||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||| ||  ||||||||||||||| ||||||||||    
T  562 aacctctagaatcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaagcccaagcccatagaagactataaatac 463  T
Q  140 cacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtaca 237  Q
    ||||||||||||||||||||   |||||||| |||||  |||||||| || |||||||||||||||| |||||||||||||||||||||||| |||||    
T  462 cacccttgagaacactctcaagcatccaatattcagtctaaaccctaatagacgattcttaaccctataatccttattgtactttttctgcaagtaca 365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 3056 - 2856
Alignment:
Q  27 gcgccgccttactaacctctagaaccttctagaaaccgccc-aaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatag 125  Q
    ||||||||| | ||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||     
T  3056 gcgccgcctcaataatctctagaatcttctagaaaccgccccaaaatacataaatacccctattacttggagactaagcaaccgaaatccaagcccatac 2957  T
Q  126 aaggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttt 224  Q
    ||||||||||||||| |||||||||| |||||| |  ||| ||||||||||  |||||||| || |||||||||||||||||||| ||||||||||||||    
T  2956 aaggctataaatacctcccttgagaagactctcgggcatcgaataatcagtctaaaccctaatagacgattcttaaccctagaatcccttattgtacttt 2857  T
Q  225 t 225  Q
    |    
T  2856 t 2856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 10592 - 10407
Alignment:
Q  43 ctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccac 142  Q
    |||||||| |||||||||||||||| |||| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||     
T  10592 ctctagaatcttctagaaaccgccctaaatgcataaatacccctattacttggagactaagcaaccgaaatccaatcccatagaaggccataaataccat 10493  T
Q  143 ccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    ||||||  ||||||||||| ||||||||||||||  |||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  10492 ccttgaacacactctcagatatccaataatcagtctaaaaccttaatatacgattcttaaccctagaatcccttattgtacttttt 10407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 109; Significance: 8e-55; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 32 - 226
Target Start/End: Original strand, 27477 - 27673
Alignment:
Q  32 gccttactaacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggct 131  Q
    |||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||| | |||||| |||| ||| ||||||||||||||||||    
T  27477 gccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggaaactaagtaaccgaaacccaagcccatagaaggct 27576  T
Q  132 ataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatcc-ttattgtacttttt 226  Q
    |||||||||| ||||||||||||||||| | |||||||||||| |  ||||||||| |||||| |||||||||||||||||| ||| ||||||||||    
T  27577 ataaataccatccttgagaacactctcaaatatccaataatcaatctaaaaccctaatatacgtttcttaaccctagaatcctttactgtacttttt 27673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 24840 - 25014
Alignment:
Q  54 tctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaaca 153  Q
    |||||||||||||  ||||||| |||||||||||||||||| | |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  24840 tctagaaaccgccttaaatacataaatacccctattacttggaaactaagtaaccgaaacccaagcccatagaaggctataaataccacccttgagaaca 24939  T
Q  154 ctctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaatcc-ttattgtacttttt 226  Q
    ||||||   ||||||||||||||  |||||||||  ||||| |||||||||||||||||| ||||||||||||||    
T  24940 ctctcaagtatccaataatcagtctaaaaccctaagatacgtttcttaaccctagaatcctttattgtacttttt 25014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 56481 - 56631
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  56481 aacctctagaaccttctagaaaccgcccaaaatacctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 56580  T
Q  140 cacccttgagaacactctcagagatccaataatcag--taaaaaccctagt 188  Q
    ||||||||||||||||||||   ||| |||||||||  |||||||||||||    
T  56581 cacccttgagaacactctcaagtatctaataatcagcctaaaaaccctagt 56631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 20699 - 20527
Alignment:
Q  22 ccatagcgccgccttactaacctctagaaccttctagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcc 120  Q
    |||| ||||||||| | ||| |||||||| |||||||| |||||||  ||||||| ||||||| |||||||||| ||||||||||||| ||| |||||||    
T  20699 ccatggcgccgcctcaataatctctagaatcttctagagaccgcccctaaatacataaataccgctattacttggagactaagcaaccgaaacccaagcc 20600  T
Q  121 catagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    |||||||||||||||||||||||||||||||||| |||||  ||| ||||||||||  |||||| ||||||||    
T  20599 catagaaggctataaataccacccttgagaacaccctcaggtatctaataatcagtctaaaaccttagtatac 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 107 - 238
Target Start/End: Complemental strand, 44453 - 44322
Alignment:
Q  107 ccaaaatccaagcccatagaaggctataaataccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccct 205  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||   |||||||| |||||  ||||||||| ||||||||||||||||||    
T  44453 ccaaaacccaagcccatagaaggttataaataccacccttgagaacactctcaagtatccaatagtcagtctaaaaccctaatatacgattcttaaccct 44354  T
Q  206 agaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||||||||||  |||||||| ||||||    
T  44353 agaatccttattgtac-ctttctgcaagtacag 44322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 8871 - 8733
Alignment:
Q  56 tagaaaccgccca-aaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacac 154  Q
    ||||||||||||  ||||||| ||| |||||||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||| || ||||||| ||     
T  8871 tagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccatagaaggctataaatactactcttgagatcat 8772  T
Q  155 tctcagagatccaataatcagt-aaaaaccctagtatac 192  Q
    | |||  ||||| ||||||| | ||||||||||||||||    
T  8771 tgtcaaggatccgataatcaatgaaaaaccctagtatac 8733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 36862 - 37051
Alignment:
Q  39 taacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaata 138  Q
    ||||||| |||| |||||||||||| || |||||||  ||||| |||| || |||| || | ||||||    || ||||||||| || ||||||||||||    
T  36862 taacctccagaagcttctagaaaccacctaaaatactaaaatatccctgttgcttggaggccaagcaatagtaacccaagcccacagcaggctataaata 36961  T
Q  139 ccacccttgagaacactctcagagatccaataatcagt-aaaaaccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||| ||  ||| || ||||| | ||||||||||||||  ||| ||| | ||||||||||||||||||||||| ||||||||||||||||    
T  36962 ccactctaaagatcattctcaaacatccaataatcagtctaaagcccgaatatacgattcttaaccctagaatcccttattgtacttttt 37051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 126547 - 126487
Alignment:
Q  242 tcatgccactgttgggccttctaagggagccaacattggtgagaatagtgtcaaactctct 302  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  126547 tcatgccactgttgggccttctaagggagccaacattggtgtgaatggtgtcaaactctct 126487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 276
Target Start/End: Complemental strand, 126427 - 126393
Alignment:
Q  242 tcatgccactgttgggccttctaagggagccaaca 276  Q
    |||||||||||||||||||||||||||||||||||    
T  126427 tcatgccactgttgggccttctaagggagccaaca 126393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 2133 - 2307
Alignment:
Q  57 agaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaacactc 156  Q
    ||||||| || |||||||| |||||||||| || ||||    | |||||||| ||| |||||||||||| ||||||||||||| ||  |||||| || ||    
T  2133 agaaacctcctaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatactactattgagatcattc 2232  T
Q  157 tcagag-atcc--aataatcagtaaaaa-ccctagtatacgattcttaaccctagaat-ccttattgtacttttt 226  Q
    |||  | ||||  |||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2233 tcaaggcatccccaatagtcagtaaaaaaccctaatatacgattcttaaccctagaatcccttattgtacttttt 2307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 49; Significance: 5e-19; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 133514 - 133414
Alignment:
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtactttt 225  Q
    |||||||||||||||| || |||| || |||||   |||||||||||| | ||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  133514 aggctataaataccactctagagatcattctcaagcatccaataatcattcaaaaccctaatatacgattcttaaccctagaatcacctattgtactttt 133415  T
Q  226 t 226  Q
    |    
T  133414 t 133414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 138043 - 137943
Alignment:
Q  127 aggctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtactttt 225  Q
    |||||||||||||||| || |||| || |||||   |||||||||||| | ||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  138043 aggctataaataccactctagagatcattctcaagcatccaataatcattcaaaaccctaatatacgattcttaaccctagaatcacctattgtactttt 137944  T
Q  226 t 226  Q
    |    
T  137943 t 137943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 135834 - 135737
Alignment:
Q  130 ctataaataccacccttgagaacactctcagagatccaataatcagtaaaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    ||||||||||||| || |||| || |||||   |||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  135834 ctataaataccactctagagatcattctcaagcatccaataatcactcaaaaccctaatatacgattcttaaccctagaatcacctattgtacttttt 135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 147553 - 147418
Alignment:
Q  39 taacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaata 138  Q
    ||||||| |||| ||||||||||||||| |||||||  ||||| || | || |||| || | ||||||    || |||||||||||| ||||||||||||    
T  147553 taacctccagaaacttctagaaaccgcctaaaatactaaaatatccatgttgcttggaggcgaagcaatagtaacccaagcccatagcaggctataaata 147454  T
Q  139 ccacccttgagaacactctcagagatccaataatca 174  Q
    |||| || |||| || |||||   ||||||||||||    
T  147453 ccactctagagatcattctcaagcatccaataatca 147418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 4133 - 4247
Alignment:
Q  114 ccaagcccatagaaggctataaataccacccttgagaacactctcagagatcc-aataatcagtaaaaaccctagtatacgattcttaaccctagaatc- 211  Q
    |||||||||||| |||||||||||||||| || |||| || ||||| |||||| |||| | ||| |||||||||  ||| |||||||||||||||||||     
T  4133 ccaagcccatagcaggctataaataccactctagagatcattctcaaagatccgaatagttagtcaaaaccctaaaataagattcttaaccctagaatca 4232  T
Q  212 cttattgtacttttt 226  Q
    | |||||||||||||    
T  4233 cctattgtacttttt 4247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 96724 - 96784
Alignment:
Q  242 tcatgccactgttgggccttctaagggagccaacattggtgagaatagtgtcaaactctct 302  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||||||||||||||    
T  96724 tcatgccactgttgggccgtctaagggagccaacactggtgtggatagtgtcaaactctct 96784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 96844 - 96884
Alignment:
Q  242 tcatgccactgttgggccttctaagggagccaacattggtg 282  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  96844 tcatgccactgttcggccttctaagggagccaacattggtg 96884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 96397 - 96209
Alignment:
Q  40 aacctctagaaccttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaatac 139  Q
    |||||| |||| ||||||||||||||| |||||||  ||||| | || || |||| || | ||||||    || ||||||||| || |||||||||||||    
T  96397 aacctccagaagcttctagaaaccgcctaaaatactaaaatatctctgttgcttggaggccaagcaatagtaacccaagcccacagcaggctataaatac 96298  T
Q  140 cacccttgagaacactctcagagatccaataatcag-taaaaaccctagtatacgattcttaaccctagaa-tccttattgtacttttt 226  Q
    ||| || |||| || |||||   |||| ||| ||||   ||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  96297 cactctagagatcattctcaagcatccgatagtcagcctaaaaccctaatatacgattcttaaccctagaatttcttattgtacttttt 96209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 25775 - 25713
Alignment:
Q  166 caataatcagta-aaaaccctagtatacgattcttaaccctagaatc-cttattgtacttttt 226  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25775 caataatcagtctaaaaccctagtatacgattcttaaccctagaatcacttattgtacttttt 25713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 245294 - 245352
Alignment:
Q  180 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcatgtacag 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  245294 aaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacag 245352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 222
Target Start/End: Complemental strand, 4022 - 3849
Alignment:
Q  52 cttctagaaaccgcccaaaatacacaaatacccctattacttgaagactaagcaaccaaaatccaagcccatagaaggctataaataccacccttgagaa 151  Q
    ||||| ||||||||  ||| |||  ||||| ||||||| |||| |  | |||||||| ||| |||||||||||  ||||||||||||| || |||||||     
T  4022 cttctggaaaccgcttaaagtacctaaatatccctattgcttggaagccaagcaaccgaaacccaagcccataacaggctataaatactacacttgagat 3923  T
Q  152 cactctcagag-atccaataatcagta-aaaaccctagtatacgattcttaaccctagaatcc-ttattgtact 222  Q
    || |||||  | ||||||||  ||||  ||||||||| |||||||||||||||| |||||||| ||||||||||    
T  3922 cattctcaaggcatccaatagacagtctaaaaccctaatatacgattcttaaccttagaatcctttattgtact 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 19315 - 19390
Alignment:
Q  163 atccaataatcagtaaaaaccctagtatacgattcttaaccctagaatcc-ttattgtactttttctgcatgtaca 237  Q
    ||||||||||||||  ||||||||| |||||||  | |||||||| |||| ||||||||||||||||||| |||||    
T  19315 atccaataatcagtccaaaccctagaatacgatattgaaccctagtatccattattgtactttttctgcaagtaca 19390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 5057 - 5101
Alignment:
Q  185 tagtatacgattcttaaccctagaatccttattgtactttttctg 229  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||    
T  5057 tagtttacgattcttaaccctagaatccttaccgtactttttctg 5101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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