View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5932_high_36 (Length: 206)
Name: NF5932_high_36
Description: NF5932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5932_high_36 |
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Alignment Details
Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 34541337 - 34541512
Alignment:
| Q |
15 |
atgaaaataaatgataaaattcataaagaagctgcacaaaattaacaatttccggcaataccagaaactaacataacaactaattaccaacacttgtcta |
114 |
Q |
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| T |
34541337 |
atgaaaataaatgataaaattcataaagaagctgcacaaaattaacaatttccggcaataccagaaactaacataacaactaattgccaacacttgtcta |
34541436 |
T |
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| Q |
115 |
tnnnnnnnncaaacaaattaacataattaagagaaagaaggaagacagtcgaacgtaccgaatctgccaacgcaatc |
191 |
Q |
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| T |
34541437 |
t-aaaaaaacaaacaaattaacataattaagagaaagaaggaagacagtcgaatgtaccgaatctgccaacgcaatc |
34541512 |
T |
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