View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5932_low_17 (Length: 341)
Name: NF5932_low_17
Description: NF5932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5932_low_17 |
 | |
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| [»] chr3 (13 HSPs) |
| |
|
| [»] scaffold0691 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 14 - 341
Target Start/End: Original strand, 2748797 - 2749124
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2748797 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
2748896 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagcagcattagcataggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttattgaaga |
213 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2748897 |
aaatttcacacgaacaaggaacttcaagcagcattagcataggagagagagaaaatggaaaatggcatgatcctcgactgtcttctctttttattgaaga |
2748996 |
T |
|
| Q |
214 |
aacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatggga |
313 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
2748997 |
aacagaagttgttggtattgaagtcccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatggga |
2749096 |
T |
|
| Q |
314 |
ggcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
2749097 |
ggcctaggaaaaaccactcttgccaagc |
2749124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 15 - 341
Target Start/End: Original strand, 2807070 - 2807396
Alignment:
| Q |
15 |
tcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || | |||||||| | || |||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
2807070 |
tcaaaactttgattccccgtcatcatatagcatctaagatccgagacattaaggtgtcggttcgcggaatcaaggaaagaagtgagaggtataacttaca |
2807169 |
T |
|
| Q |
115 |
aatttcacacgaacgaggaacttcaagcagcattagcataggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttattgaagaa |
214 |
Q |
| |
|
||||||||| |||| |||| | |||||| ||| |||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2807170 |
aatttcacatgaacaaggatcatcaagccgcaacagcactagagagacagaaaatggaagatggcgtgatcctcgactgtcttccctttttattgaagaa |
2807269 |
T |
|
| Q |
215 |
acagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatgggag |
314 |
Q |
| |
|
| |||| |||| ||| ||||| |||| ||||||| |||||| |||||||||||| |||| |||||||||||||||||| || |||||||||||||||| |
|
|
| T |
2807270 |
agagaaattgtaggatttgaattcccaagagaagaaatgtctgtttggttattggagggtgtagctgagcgcacggtgatttcggtggtaggaatgggag |
2807369 |
T |
|
| Q |
315 |
gcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
| ||||||||||||||||||||||||| |
|
|
| T |
2807370 |
gtctaggaaaaaccactcttgccaagc |
2807396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 14 - 341
Target Start/End: Original strand, 5412706 - 5413015
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5412706 |
atcaaaactttgattccccatcatcagatagcatctgagattcaggacattaagttgtcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
5412805 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagcagcattagcataggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttattgaaga |
213 |
Q |
| |
|
|||||||| ||||||| |||| |||||| ||||||||||| |||||| ||||||||||||||||| || || ||| ||| |
|
|
| T |
5412806 |
aaatttca------------------agcagcaacagcagtagagagacagaaaatggaagatggcgagatcctcgactgtcttccctattcattacaga |
5412887 |
T |
|
| Q |
214 |
aacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatggga |
313 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| || || || || ||||| |||||||||||||| |
|
|
| T |
5412888 |
aacagaagttgtaggaattgaaggtccaaaagaagaattgtctggttggttattggatggtgcagcggaacgtacagtcatatcagtggtaggaatgggg |
5412987 |
T |
|
| Q |
314 |
ggcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
5412988 |
ggcctaggaaaaaccactcttgccaagc |
5413015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 341
Target Start/End: Complemental strand, 2856149 - 2855819
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
||||||||||||||||||| |||| | || ||||| || ||||||||||| || || |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2856149 |
atcaaaactttgattccccatcataaaattgcatcagagattcaggacatcaagttgtcaattcgtggaatcaaggaaagaagccagaggtataactttc |
2856050 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagc---agcattagcataggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttattga |
210 |
Q |
| |
|
||||||||||||| | |||| | |||||| || | ||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
2856049 |
aaatttcacacgagcaaggatcctcaagccaaagaaaccgcagtggagagacagaaaatggaagatggcgtgatcctcgactgtcttcccttttcattga |
2855950 |
T |
|
| Q |
211 |
agaaacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatg |
310 |
Q |
| |
|
||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||| || ||||| |||||| |
|
|
| T |
2855949 |
agaaacagaagttgtaggcattgaaggcccaaaagaagaattgtctggttggttattggaaggtatatctgagcgcaaagtgatttcagtggtgggaatg |
2855850 |
T |
|
| Q |
311 |
ggaggcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
|| || |||||||||| ||||||||||||| |
|
|
| T |
2855849 |
gggggtataggaaaaactactcttgccaagc |
2855819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 339
Target Start/End: Original strand, 2768868 - 2769196
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
||||||||||||| |||||||||| | || |||| || |||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
2768868 |
atcaaaactttgactccccgtcataaaattgcattagagattcaggacattaagttgtcaattcgtggaatcaaggaaagaagcgagaggtatagctttc |
2768967 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagcagcattagca-taggagagag--agaaaatggaaaatggcgtgatcctcgactgtcttctctttttattga |
210 |
Q |
| |
|
||| |||||| |||| |||| | |||| ||||| | || ||| ||||| ||||| ||||| ||||||||||||||| ||||||| || |||||||| |
|
|
| T |
2768968 |
aaacttcacatgaacaaggatcctcaaacagcaggaacagtagtggagagtcagaaagtggaagatggcgtgatcctcggatgtcttccctctttattga |
2769067 |
T |
|
| Q |
211 |
agaaacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatg |
310 |
Q |
| |
|
|||||||||| |||| ||| | ||||| |||| ||||||| | | ||||||||||||||| |||| |||| ||||||| |||||||| |||||||||||| |
|
|
| T |
2769068 |
agaaacagaaattgtaggattggaaggcccaagagaagaattatttggttggttattggagggtgcagctaagcgcacagtgatatcagtggtaggaatg |
2769167 |
T |
|
| Q |
311 |
ggaggcctaggaaaaaccactcttgccaa |
339 |
Q |
| |
|
|| || ||||||||||||||||||||||| |
|
|
| T |
2769168 |
gggggtctaggaaaaaccactcttgccaa |
2769196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 14 - 341
Target Start/End: Original strand, 2759013 - 2759343
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
||||||||||||||||||||||| | || ||||| || ||||| ||||| || | |||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
2759013 |
atcaaaactttgattccccgtcacaaaattgcatcagagattcaagacatcaagctgacaattcacggaatcaaggaaagaagcgtgaggtataactttc |
2759112 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagcagcattagca-ta--ggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttattga |
210 |
Q |
| |
|
|||||||| | |||| |||| | |||| ||||| | || || | ||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
2759113 |
aaatttcaaatgaacaaggatcctcaaacagcagcaacactaccgaagagaaagaaaatggaagatggcgtgatcctcgactgtcttcccttttcattga |
2759212 |
T |
|
| Q |
211 |
agaaacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatg |
310 |
Q |
| |
|
|||||||||| |||| ||| ||||||| |||||||||||||| | ||||||||||||||| ||| |||||| ||||| ||||| || |||||||||||| |
|
|
| T |
2759213 |
agaaacagaaattgtaggatttgaaggcccaaaagaagaactatatggttggttattggagggttcagctgaacgcacagtgatttcagtggtaggaatg |
2759312 |
T |
|
| Q |
311 |
ggaggcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
|| || || || ||||||||||||||||||| |
|
|
| T |
2759313 |
gggggtctcggcaaaaccactcttgccaagc |
2759343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 14 - 341
Target Start/End: Original strand, 2797160 - 2797490
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
|||||||| |||||| ||| ||| || ||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2797160 |
atcaaaacattgatttcccttcaccagatagcatctgagattaagaacattaagatatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
2797259 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagcagcattagcat-aggagagaga--gaaaatggaaaatggcgtgatcctcgactgtcttctctttttattga |
210 |
Q |
| |
|
|||||||||| || |||| | |||||||||| | || || ||||||| || ||| ||| |||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
2797260 |
aaatttcacagacaccaggatcatcaagcagcaacaacagcagtagagagacggataatagaagatggtgtgatcctcgactgtcttccctttttattga |
2797359 |
T |
|
| Q |
211 |
agaaacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatg |
310 |
Q |
| |
|
|||||| | | |||| ||| ||||||| || | |||||| |||||||||||||| | || || |||||||||||| ||||| || ||||| |||||| |
|
|
| T |
2797360 |
agaaactgcaattgtcggatttgaaggcccgagggaagaattgtctggttggttactagagggcacagctgagcgcacagtgatttcagtggttggaatg |
2797459 |
T |
|
| Q |
311 |
ggaggcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |
|
|
| T |
2797460 |
ggaggtctaggaaaaaccactcttgccaagc |
2797490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 336
Target Start/End: Original strand, 2790166 - 2790491
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2790166 |
atcaaaactttgattccccatcatcagatagcatctgagattaaaaacattaagatatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
2790265 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagcagcattagca-taggagagaga--gaaaatggaaaatggcgtgatcctcgactgtcttctctttttattga |
210 |
Q |
| |
|
|||||||||| || |||| | |||||||||| | || || ||||||| || ||| ||| ||||| ||||||||| ||||||| ||||| ||||| |
|
|
| T |
2790266 |
aaatttcacagacaccaggatcatcaagcagcagcaacagcagtagagagacggacaatagaagatggcatgatcctcggttgtcttcccttttcattga |
2790365 |
T |
|
| Q |
211 |
agaaacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatg |
310 |
Q |
| |
|
|||||| | | |||| ||| ||||||| || | |||||| ||||||||||||||||||| || |||||||||||| ||||| || ||||| |||||| |
|
|
| T |
2790366 |
agaaactgcaattgtcggatttgaaggcccgagggaagaattgtctggttggttattggagggcacagctgagcgcacagtgatttcagtggttggaatg |
2790465 |
T |
|
| Q |
311 |
ggaggcctaggaaaaaccactcttgc |
336 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
2790466 |
ggaggtctaggaaaaaccactcttgc |
2790491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 341
Target Start/End: Original strand, 2818362 - 2818686
Alignment:
| Q |
20 |
actttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttcaaattt |
119 |
Q |
| |
|
||||||| ||||||| || | || ||||| || ||||||||||| || || |||||||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
2818362 |
actttgactccccgttatgaaattgcatcagagattcaggacatcaagttgtcaattcgtggaatcaaggaaagaagcgagaggtataacttccaaattt |
2818461 |
T |
|
| Q |
120 |
cacacgaacgaggaacttcaagc---agcattagcataggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttattgaagaaac |
216 |
Q |
| |
|
| || |||| |||| | || || |||| | |||||| ||| | ||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2818462 |
cgcatgaacaaggatcctcgtgccaaagcaacggatgtggagagtcagacacaggaggatggcgtgatcctcgactgtcttctcttttcattgaagaaac |
2818561 |
T |
|
| Q |
217 |
agaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatgggaggc |
316 |
Q |
| |
|
|||| | || ||| ||||||| || | ||||||||| | ||||||||||||||| |||| ||| |||||||| |||||||| |||||||||||||| || |
|
|
| T |
2818562 |
agaaatcgtaggatttgaaggcccgagagaagaactatatggttggttattggagggtgcagccgagcgcacagtgatatcagtggtaggaatggggggt |
2818661 |
T |
|
| Q |
317 |
ctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
2818662 |
ctaggaaaaaccactcttgccaagc |
2818686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 14 - 341
Target Start/End: Complemental strand, 2838942 - 2838609
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
||||||||||||||||||||||| | || ||||| || ||||| ||||| || | ||| || ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
2838942 |
atcaaaactttgattccccgtcacaaaattgcatcagagattcaagacatcaagctgacaactcacggaatcaagaaaagaagcgagaggtataactttc |
2838843 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaagcagcattagcata------ggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttat |
207 |
Q |
| |
|
|||||||| | |||| |||| | |||||||||| | || |||||| ||||||||||| ||||| || |||||||||||||| ||||| || |
|
|
| T |
2838842 |
aaatttcaaatgaacaaggatcctcaagcagcagcaacagcagtcctggagaggcagaaaatggaagatggcacgaccctcgactgtcttcccttttcat |
2838743 |
T |
|
| Q |
208 |
tgaagaaacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtagga |
307 |
Q |
| |
|
||||||||||||| |||| ||| ||||||| |||| ||||||| | | ||||||||||||||| |||| |||||||||||| || ||||| ||||||||| |
|
|
| T |
2838742 |
tgaagaaacagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagctgagcgcacagtcatatcagtggtagga |
2838643 |
T |
|
| Q |
308 |
atgggaggcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| |
|
|
| T |
2838642 |
atggggggtctaggaaaaaccactcttgccaagc |
2838609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 22648590 - 22648533
Alignment:
| Q |
281 |
gagcgcacggtgatatccgtggtaggaatgggaggcctaggaaaaaccactcttgcca |
338 |
Q |
| |
|
|||||||| || || || |||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
22648590 |
gagcgcactgtcatctctgtggtaggtatgggagggctaggaaaaaccactcttgcca |
22648533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 21945673 - 21945717
Alignment:
| Q |
296 |
tccgtggtaggaatgggaggcctaggaaaaaccactcttgccaag |
340 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||| |||||| |
|
|
| T |
21945673 |
tccgtggtaggaatgggagggcaaggaaaaaccactctagccaag |
21945717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 22621328 - 22621288
Alignment:
| Q |
299 |
gtggtaggaatgggaggcctaggaaaaaccactcttgccaa |
339 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
22621328 |
gtggtaggaatgggaggacaaggaaaatccactcttgccaa |
22621288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0691 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0691
Description:
Target: scaffold0691; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 341
Target Start/End: Complemental strand, 6491 - 6161
Alignment:
| Q |
14 |
atcaaaactttgattccccgtcatcatatagcatctgaaattcaggacattaaattatcaattcgtggaatcaaggaaagaagtgagaggtataactttc |
113 |
Q |
| |
|
||||||||||||||| | | ||||| ||||||||||| ||||||||||| || | |||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
6491 |
atcaaaactttgatttctcagcatcagatagcatctgagattcaggacataaagctgtcaattcgtggaatcaaggacagaagtgaaaggtataactttc |
6392 |
T |
|
| Q |
114 |
aaatttcacacgaacgaggaacttcaag---cagcattagcataggagagagagaaaatggaaaatggcgtgatcctcgactgtcttctctttttattga |
210 |
Q |
| |
|
|||||| ||| |||| ||| | ||||| ||||| |||| ||||||| ||||||||||| |||||||||||||||| | ||| | ||||||||||| |
|
|
| T |
6391 |
aaattttacatgaacctggatcatcaagtgtcagcagcagcacaggagaggcagaaaatggaagatggcgtgatcctcgattatctgccctttttattga |
6292 |
T |
|
| Q |
211 |
agaaacagaagttgttggaattgaaggtccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatg |
310 |
Q |
| |
|
|||||| |||||||| ||| | ||||| |||| ||| ||| | | ||||||||||||||| || |||||||||||| || || || |||||||||||| |
|
|
| T |
6291 |
agaaactgaagttgtaggattcgaaggcccaagagaggaattatatggttggttattggagagtccagctgagcgcaccgtaatttcagtggtaggaatg |
6192 |
T |
|
| Q |
311 |
ggaggcctaggaaaaaccactcttgccaagc |
341 |
Q |
| |
|
||||| |||| ||||||||||||||||||| |
|
|
| T |
6191 |
ggaggtatagggaaaaccactcttgccaagc |
6161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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