View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5932_low_32 (Length: 256)
Name: NF5932_low_32
Description: NF5932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5932_low_32 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27725430 - 27725629
Alignment:
| Q |
1 |
aataacatgttctgtgtgactgtaatttgagcagctatgcttaggaaaaccaacttgttcggttccaatggtcaaagcaactttcaccggtggcaatgat |
100 |
Q |
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| T |
27725430 |
aataacatgttctgtgtgactgtaatttgagcagctatgcttaggaaaaccaacttgttcggttccaatggtcaaagcaactttcaccggtggcaatgat |
27725529 |
T |
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| Q |
101 |
ggttgtccagatattgtgaagacgcttgcaatccaagtgaagtgtggatgagttgagctagtagtgatttggttggtgaagttgatggagtccatgagct |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
27725530 |
ggttgtccagatgttgtgaagacgcttgcaatccaagtgaagtgtggatgagttgagc---tagtgatttggttggtgaagttgatggagtccatgagct |
27725626 |
T |
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