View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5933_low_15 (Length: 344)

Name: NF5933_low_15
Description: NF5933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5933_low_15
NF5933_low_15
[»] chr6 (19 HSPs)
chr6 (14-329)||(11459829-11460155)
chr6 (68-149)||(5640258-5640339)
chr6 (23-148)||(4441308-4441441)
chr6 (32-146)||(1501857-1501979)
chr6 (68-149)||(3081724-3081805)
chr6 (22-149)||(12428886-12429010)
chr6 (68-151)||(17441211-17441294)
chr6 (68-149)||(10961802-10961883)
chr6 (69-149)||(33110512-33110592)
chr6 (23-146)||(6999267-6999398)
chr6 (68-145)||(7437357-7437434)
chr6 (68-149)||(13312075-13312158)
chr6 (67-113)||(18095571-18095617)
chr6 (68-134)||(18099869-18099935)
chr6 (22-134)||(8200641-8200750)
chr6 (68-150)||(9463359-9463441)
chr6 (20-66)||(10346718-10346764)
chr6 (68-149)||(9950766-9950847)
chr6 (21-65)||(21298911-21298955)
[»] chr3 (24 HSPs)
chr3 (22-149)||(9505127-9505262)
chr3 (68-149)||(12710755-12710836)
chr3 (68-149)||(52934865-52934946)
chr3 (17-146)||(52199423-52199560)
chr3 (22-150)||(28242582-28242718)
chr3 (68-149)||(54393449-54393530)
chr3 (68-134)||(20550223-20550289)
chr3 (68-134)||(30662152-30662218)
chr3 (68-146)||(33438740-33438818)
chr3 (68-149)||(25253755-25253836)
chr3 (68-149)||(26049546-26049627)
chr3 (73-149)||(19560780-19560856)
chr3 (68-145)||(1674682-1674759)
chr3 (68-145)||(30743625-30743702)
chr3 (68-149)||(40943614-40943695)
chr3 (70-142)||(15822362-15822434)
chr3 (77-149)||(54432183-54432255)
chr3 (71-147)||(28687128-28687204)
chr3 (28-149)||(39135359-39135488)
chr3 (22-151)||(41609887-41610023)
chr3 (68-134)||(39469552-39469618)
chr3 (68-149)||(45714749-45714830)
chr3 (22-66)||(32689168-32689212)
chr3 (22-66)||(52199388-52199432)
[»] chr2 (23 HSPs)
chr2 (22-149)||(3409194-3409329)
chr2 (20-149)||(40680218-40680343)
chr2 (69-149)||(44740489-44740569)
chr2 (68-134)||(24844687-24844753)
chr2 (68-149)||(30713209-30713290)
chr2 (35-151)||(41332243-41332367)
chr2 (68-146)||(27464581-27464659)
chr2 (68-149)||(11027961-11028042)
chr2 (68-149)||(29806959-29807040)
chr2 (68-146)||(11006983-11007059)
chr2 (68-147)||(20203722-20203801)
chr2 (68-145)||(17616320-17616397)
chr2 (68-111)||(13829931-13829974)
chr2 (68-143)||(27902451-27902526)
chr2 (70-146)||(17368999-17369075)
chr2 (69-148)||(2646981-2647060)
chr2 (68-147)||(9963812-9963891)
chr2 (22-149)||(27634670-27634805)
chr2 (68-146)||(40458974-40459052)
chr2 (68-149)||(34116179-34116260)
chr2 (67-115)||(14103319-14103367)
chr2 (22-66)||(33831494-33831538)
chr2 (22-66)||(34064704-34064748)
[»] chr4 (45 HSPs)
chr4 (14-129)||(16742362-16742474)
chr4 (23-146)||(27891387-27891517)
chr4 (22-146)||(11055235-11055367)
chr4 (68-151)||(12673032-12673115)
chr4 (19-146)||(9959339-9959462)
chr4 (23-148)||(26632936-26633069)
chr4 (23-149)||(22184503-22184637)
chr4 (68-149)||(51995131-51995212)
chr4 (68-149)||(80550-80631)
chr4 (68-159)||(46944540-46944631)
chr4 (68-146)||(49405644-49405722)
chr4 (68-149)||(38791745-38791825)
chr4 (69-149)||(28265679-28265759)
chr4 (23-149)||(43387268-43387391)
chr4 (68-151)||(36156298-36156381)
chr4 (68-147)||(50146926-50147005)
chr4 (69-156)||(52813655-52813742)
chr4 (78-151)||(9222136-9222209)
chr4 (68-121)||(13761852-13761905)
chr4 (20-111)||(38493032-38493120)
chr4 (68-149)||(40797883-40797964)
chr4 (69-149)||(22721381-22721461)
chr4 (14-147)||(48151134-48151275)
chr4 (72-146)||(24007912-24007986)
chr4 (68-134)||(51407970-51408036)
chr4 (69-134)||(55892006-55892071)
chr4 (68-115)||(28470872-28470919)
chr4 (68-134)||(34980525-34980591)
chr4 (67-133)||(39736735-39736801)
chr4 (68-114)||(43812098-43812144)
chr4 (68-146)||(48339108-48339186)
chr4 (68-129)||(19455184-19455245)
chr4 (68-113)||(43798265-43798310)
chr4 (67-146)||(15697092-15697171)
chr4 (22-146)||(19852977-19853109)
chr4 (159-218)||(54170888-54170947)
chr4 (22-149)||(53369871-53370006)
chr4 (68-109)||(6866149-6866190)
chr4 (22-156)||(21441580-21441722)
chr4 (72-149)||(48977633-48977710)
chr4 (22-66)||(12789649-12789693)
chr4 (22-66)||(44791340-44791384)
chr4 (22-66)||(50606007-50606051)
chr4 (69-149)||(52706271-52706351)
chr4 (22-66)||(53369687-53369731)
[»] chr7 (46 HSPs)
chr7 (23-149)||(33124700-33124834)
chr7 (69-149)||(33935567-33935647)
chr7 (14-134)||(41449747-41449864)
chr7 (23-149)||(22075068-22075202)
chr7 (22-150)||(10618925-10619061)
chr7 (68-149)||(18249999-18250080)
chr7 (68-145)||(21760593-21760670)
chr7 (69-146)||(44421910-44421987)
chr7 (68-149)||(46573618-46573699)
chr7 (68-149)||(49034230-49034311)
chr7 (68-146)||(26719873-26719951)
chr7 (68-146)||(35543565-35543643)
chr7 (69-149)||(222232-222312)
chr7 (68-148)||(18740225-18740305)
chr7 (68-159)||(17025357-17025448)
chr7 (14-134)||(23227020-23227148)
chr7 (14-134)||(23236173-23236301)
chr7 (68-151)||(24128504-24128587)
chr7 (14-133)||(48634443-48634570)
chr7 (69-149)||(45055787-45055867)
chr7 (67-146)||(33019358-33019437)
chr7 (68-146)||(3942234-3942312)
chr7 (68-146)||(36472497-36472575)
chr7 (22-156)||(5776129-5776271)
chr7 (69-146)||(11595805-11595882)
chr7 (22-151)||(37334282-37334419)
chr7 (72-151)||(43052934-43053013)
chr7 (14-149)||(33171540-33171683)
chr7 (22-66)||(665944-665988)
chr7 (68-124)||(32357019-32357075)
chr7 (69-121)||(40480084-40480136)
chr7 (74-133)||(33140824-33140883)
chr7 (68-146)||(7447934-7448012)
chr7 (68-146)||(33898953-33899031)
chr7 (68-134)||(37401587-37401653)
chr7 (72-149)||(36927061-36927138)
chr7 (69-146)||(45176304-45176381)
chr7 (73-145)||(2466526-2466598)
chr7 (22-66)||(3930813-3930857)
chr7 (22-66)||(5795033-5795077)
chr7 (22-66)||(15434247-15434291)
chr7 (68-146)||(17608770-17608845)
chr7 (68-156)||(37106884-37106972)
chr7 (22-66)||(42072087-42072131)
chr7 (14-66)||(44994061-44994113)
chr7 (22-66)||(48505885-48505929)
[»] chr5 (32 HSPs)
chr5 (22-151)||(1840691-1840828)
chr5 (68-134)||(19282135-19282201)
chr5 (68-146)||(32945030-32945108)
chr5 (25-146)||(31021865-31021994)
chr5 (68-146)||(27196130-27196208)
chr5 (29-134)||(40056384-40056497)
chr5 (68-146)||(10327983-10328061)
chr5 (69-145)||(14500716-14500792)
chr5 (68-146)||(20189026-20189104)
chr5 (68-146)||(41783378-41783456)
chr5 (68-149)||(3801370-3801451)
chr5 (68-149)||(20190591-20190671)
chr5 (72-149)||(27450587-27450664)
chr5 (23-134)||(28431066-28431174)
chr5 (23-149)||(38522867-38523001)
chr5 (72-145)||(39414239-39414312)
chr5 (69-149)||(26218101-26218181)
chr5 (73-149)||(34719663-34719739)
chr5 (72-149)||(15933220-15933297)
chr5 (72-149)||(26298368-26298445)
chr5 (72-145)||(26299904-26299977)
chr5 (72-145)||(39407463-39407536)
chr5 (22-149)||(27906097-27906232)
chr5 (74-156)||(34857406-34857488)
chr5 (69-134)||(5382846-5382911)
chr5 (68-149)||(10494038-10494119)
chr5 (72-109)||(19716240-19716277)
chr5 (68-109)||(36523808-36523849)
chr5 (78-146)||(28247473-28247541)
chr5 (23-91)||(32157010-32157077)
chr5 (72-148)||(34724761-34724837)
chr5 (20-56)||(39414178-39414214)
[»] chr1 (52 HSPs)
chr1 (68-148)||(28006403-28006483)
chr1 (68-146)||(12224584-12224662)
chr1 (68-149)||(15306546-15306627)
chr1 (68-149)||(44596570-44596651)
chr1 (32-133)||(20903971-20904069)
chr1 (18-146)||(24575904-24576040)
chr1 (68-146)||(31816621-31816699)
chr1 (68-146)||(45581017-45581095)
chr1 (68-145)||(5204479-5204556)
chr1 (68-149)||(6413292-6413373)
chr1 (68-149)||(25124891-25124972)
chr1 (68-149)||(35810771-35810852)
chr1 (68-156)||(15014368-15014456)
chr1 (14-147)||(23915605-23915746)
chr1 (68-157)||(3577724-3577813)
chr1 (74-151)||(21680660-21680737)
chr1 (68-149)||(29677525-29677606)
chr1 (22-146)||(31869593-31869725)
chr1 (68-151)||(47983308-47983391)
chr1 (68-146)||(7841676-7841753)
chr1 (68-157)||(7956377-7956466)
chr1 (68-149)||(42916120-42916201)
chr1 (72-151)||(7996028-7996107)
chr1 (68-146)||(7596446-7596524)
chr1 (68-146)||(14578594-14578672)
chr1 (22-149)||(39802773-39802908)
chr1 (68-134)||(45653452-45653518)
chr1 (68-134)||(50447394-50447460)
chr1 (69-146)||(19508582-19508659)
chr1 (68-149)||(46264950-46265031)
chr1 (68-149)||(51432144-51432225)
chr1 (68-146)||(7016084-7016162)
chr1 (68-134)||(14101916-14101982)
chr1 (70-132)||(14796643-14796705)
chr1 (70-132)||(14805517-14805579)
chr1 (68-146)||(15257180-15257258)
chr1 (22-149)||(24469823-24469958)
chr1 (22-149)||(32179857-32179992)
chr1 (72-149)||(38061184-38061261)
chr1 (68-149)||(40159636-40159717)
chr1 (68-149)||(42937127-42937208)
chr1 (14-119)||(51432239-51432352)
chr1 (74-149)||(7702894-7702969)
chr1 (22-146)||(47602871-47603003)
chr1 (68-134)||(23916863-23916929)
chr1 (67-101)||(29113579-29113613)
chr1 (68-146)||(36119124-36119202)
chr1 (22-149)||(36419100-36419235)
chr1 (69-146)||(572425-572502)
chr1 (22-66)||(37441283-37441327)
chr1 (69-121)||(43087500-43087552)
chr1 (69-113)||(48575122-48575166)
[»] chr8 (17 HSPs)
chr8 (22-149)||(3307933-3308068)
chr8 (20-149)||(9412530-9412667)
chr8 (68-149)||(39478103-39478184)
chr8 (68-147)||(43384847-43384926)
chr8 (68-146)||(33279986-33280064)
chr8 (68-145)||(32740692-32740769)
chr8 (67-149)||(22564058-22564140)
chr8 (68-133)||(27189104-27189169)
chr8 (69-113)||(1091781-1091825)
chr8 (69-149)||(34655089-34655169)
chr8 (68-107)||(12378405-12378444)
chr8 (67-133)||(9136004-9136070)
chr8 (68-114)||(23181208-23181254)
chr8 (28-94)||(28492722-28492787)
chr8 (72-149)||(453540-453617)
chr8 (22-66)||(11161571-11161615)
chr8 (69-149)||(43967564-43967644)
[»] scaffold0171 (1 HSPs)
scaffold0171 (69-146)||(21141-21218)
[»] scaffold0223 (1 HSPs)
scaffold0223 (68-146)||(14479-14557)
[»] scaffold0025 (1 HSPs)
scaffold0025 (68-146)||(11443-11521)
[»] scaffold0224 (1 HSPs)
scaffold0224 (68-149)||(7314-7395)
[»] scaffold0135 (1 HSPs)
scaffold0135 (78-151)||(32789-32862)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-149)||(124487-124621)
[»] scaffold0204 (1 HSPs)
scaffold0204 (68-146)||(26630-26708)
[»] scaffold0316 (1 HSPs)
scaffold0316 (22-66)||(19295-19339)


Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 14 - 329
Target Start/End: Complemental strand, 11460155 - 11459829
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  11460155 atattcaactcaagttcagctcatttatttaacaaacttaattctcagctcaacatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagt 11460056  T
Q  114 tccgaactattatcgagttggatcgattcattgccaacactaatagagattgaaactttttgaaattggtcaaactataatgaacgaatcagaatcgtta 213  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  11460055 tccgaactattattgagttggatcggttcattgccaaccctaatagagattgaaacattttgaaattggtcaaattataatgaacgaatcagaatcgtta 11459956  T
Q  214 gatcaacttttaacttacccttaattaacttttaacata----------ttaattatttcaac-nnnnnnnctattaatattaacttacccttaatttta 302  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||        |||||||||||||||||||||||||||||    
T  11459955 gatcaacttttaacttacccttaattaacttttaacatataacaaacacttaattatttcaacaaaaaaaactattaatattaacttacccttaatttta 11459856  T
Q  303 aattgaatgtttaagtaatgatatatc 329  Q
    |||||||||||||||||||||||||||    
T  11459855 aattgaatgtttaagtaatgatatatc 11459829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 5640339 - 5640258
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| |||| |||||||||||||||| || |||||| | |||||||||| ||| ||||||||||    
T  5640339 atttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcggttcattgcca 5640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 4441441 - 4441308
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||| ||||||||||||||||||| ||||||||| ||| |||||         |||| |||| ||||||||||||||||||  |||| ||||||||||||    
T  4441441 tcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcgagtt 4441342  T
Q  115 ccgaactattatcgagttggatcgattcattgcc 148  Q
     ||||||||| ||||||||| ||| |||||||||    
T  4441341 tcgaactattgtcgagttggttcggttcattgcc 4441308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 1501857 - 1501979
Alignment:
Q  32 gctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactat 123  Q
    ||||||||||||||| ||||||||| |||||||||         ||||||||||||||| ||||||||||||| |||| || ||||||||| ||||| ||    
T  1501857 gctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaat 1501956  T
Q  124 tatcgagttggatcgattcattg 146  Q
    | ||||||||| ||| |||||||    
T  1501957 tgtcgagttggttcggttcattg 1501979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 3081805 - 3081724
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||  ||||||||| ||||| ||| ||| ||||||||||    
T  3081805 atttggttcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactattttcgagctggttcggttcattgcca 3081724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 12428886 - 12429010
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaact 121  Q
    ||||| ||| ||||||||||||||| ||||||||| |||||||| |   |||||||| ||||||||||||| |||  ||| |||| |||||||| |||||    
T  12428886 ctcaagttcggctcatttatttaacgaacttaattttcagctcagt---tggttcataaaccaagttcaacaagttcattgtcgagtcgagttctgaact 12428982  T
Q  122 attatcgagttggatcgattcattgcca 149  Q
    ||  | ||||||| ||| ||||||||||    
T  12428983 atatttgagttggttcggttcattgcca 12429010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 17441211 - 17441294
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    ||||||||||||||| ||||||||||| | ||||| | ||||||||| ||||||||| ||| ||||| ||| ||||||||||||    
T  17441211 atttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactattttcgggttggttcggttcattgccaac 17441294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 10961883 - 10961802
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||| |||||| ||||||| | || | |||| | |||||||||| ||| ||||||||||    
T  10961883 atttggttcatgaaccaagttcaacgaatcaattgtcgaatcaaattacaaactttaatcgagttggttcggttcattgcca 10961802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 33110512 - 33110592
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||   ||||| ||| |||||||||||||| |  |||||||| |||| ||||||||||    
T  33110512 tttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgcca 33110592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 6999267 - 6999398
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||| ||||| |||||| |||||||||||||||| |||||||||         |||| |||||| ||||||||||||||| | ||||||||||||||||     
T  6999267 tcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcgagtc 6999366  T
Q  115 ccgaactattatcgagttggatcgattcattg 146  Q
     | ||||||| ||||||||  |||||| ||||    
T  6999367 tcaaactattgtcgagttgcttcgatttattg 6999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 7437357 - 7437434
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    ||||||||| |||||||||||||||||  | |||||||||||||||  ||||||||| ||||||| | ||| ||||||    
T  7437357 atttggttcgtgaaccaagttcaacgaacccattatcgaatcgagtatcgaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 13312075 - 13312158
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgag--ttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||| ||| ||  ||||||||||||||||  |  ||||||||| ||||||||| ||| ||||||||||    
T  13312075 atttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatatcgaactattttcgagttggttcggttcattgcca 13312158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 18095571 - 18095617
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||    
T  18095571 tatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagt 18095617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 18099869 - 18099935
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||  | |||| || |||||||||    
T  18099869 atttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtctcaaacttttttcgagttgg 18099935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 8200641 - 8200750
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaact 121  Q
    ||||| |||| |||||||| ||||| ||||||||| |||||||  ||   |||||||||| |||||||||||  | || |||||| |||| |  ||||||    
T  8200641 ctcaagttcaactcatttaattaacgaacttaattttcagctcgtta---ggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaact 8200737  T
Q  122 attatcgagttgg 134  Q
    || ||||||||||    
T  8200738 ataatcgagttgg 8200750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 9463441 - 9463359
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaa 150  Q
    ||||||||||| ||| ||||| || |||| ||||||||| |||||||||||||| |  |||||| |  ||| |||||||||||    
T  9463441 atttggttcataaactaagtttaatgagttaattatcgagtcgagttccgaactttattcgagtagtctcggttcattgccaa 9463359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 10346718 - 10346764
Alignment:
Q  20 aactcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  10346718 aactcaagttcagctcatttaattaacgaacttaattttcagctcaa 10346764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 9950847 - 9950766
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| | || ||| || ||||||| | ||  ||||| | |||||||||  ||||||||||||||    
T  9950847 atttggttcatgaaccaagttcgatgaatcatttgtcgaatcaaattatgaactttaatcgagttgattcgattcattgcca 9950766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 21298911 - 21298955
Alignment:
Q  21 actcaaattcagctcatttatttaacaaacttaattctcagctca 65  Q
    |||||| ||||||||| ||| ||||||||||||||| ||||||||    
T  21298911 actcaagttcagctcagttaattaacaaacttaattttcagctca 21298955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 9505262 - 9505127
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||         ||||||||||||||||||||||||||||| |||| |||||||||||    
T  9505262 ctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 9505163  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||| ||||||||| ||| ||||||||||    
T  9505162 tccgaactattgtcgagttggttcggttcattgcca 9505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 12710755 - 12710836
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||||| ||| ||||||||||    
T  12710755 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgcca 12710836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 52934865 - 52934946
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || |||||| ||  ||||||||||    
T  52934865 atttggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactattgtcaagttggttcagttcattgcca 52934946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 52199423 - 52199560
Alignment:
Q  17 ttcaactcaaattcagctcatttatttaacaaacttaattctcagctcaatat--------ttggttcatgaaccaagttcaacgagtcaattatcgaat 108  Q
    |||| ||||| |||||||||||| |||||| ||||||||| |||||||||  |        ||||||||||||||||||||||||| | |||| ||||||    
T  52199423 ttcagctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaat 52199522  T
Q  109 cgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||| || ||||||| ||||||||| |||||||||||    
T  52199523 cgagtcccaaactattgtcgagttggttcgattcattg 52199560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 28242582 - 28242718
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||| ||||||||||||| || |||||| |||||||||         |||||||||||||||||| |||||||||| |||| ||||||| |||    
T  28242582 ctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcaagt 28242681  T
Q  114 tccgaactattatcgagttggatcgattcattgccaa 150  Q
    |||||| |||| ||||||||  ||| |||||||||||    
T  28242682 tccgaattattgtcgagttgattcggttcattgccaa 28242718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 54393530 - 54393449
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||| |||||||||||||||||| |||||| ||||||||| || |||||| | |||||||||| ||| ||||||||||    
T  54393530 atttggtttatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgcca 54393449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 20550289 - 20550223
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||  ||||||||| |||||||||    
T  20550289 atttggttcgtgaaccaagttcaacaaatcaattatcgaatcgagtatcgaactattttcgagttgg 20550223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 30662218 - 30662152
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |  | ||||||| |||||||||    
T  30662218 atttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttgg 30662152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 33438818 - 33438740
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| || | |||| | |||||||||| ||| |||||||    
T  33438818 atttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaactttaatcgagttggttcggttcattg 33438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 25253755 - 25253836
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||| |||  ||| |||| ||||||||| ||||||  ||||||||| ||| ||||||||||    
T  25253755 atttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttccaaactatattcgagttggttcggttcattgcca 25253836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 26049627 - 26049546
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||| |||||||||||||||||||  ||||||||||||||||| |  | ||||||| ||||||||| ||| ||||||||||    
T  26049627 atttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatctcaaactattttcgagttggttcggttcattgcca 26049546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 19560856 - 19560780
Alignment:
Q  73 gttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| | |||| |||| |||| |||||||||||  ||||||||| ||| ||||||||||    
T  19560856 gttcatgaaccaagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcattgcca 19560780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 1674682 - 1674759
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    ||||||||||||||||||||||||| ||  |||| | ||||||| ||| |||||||| ||||||||| ||| ||||||    
T  1674682 atttggttcatgaaccaagttcaacaagataattgttgaatcgaattctgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 30743625 - 30743702
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    |||||||||||||||||||||||||||||  ||  |||| ||||| ||||||||||  ||||||||| ||| ||||||    
T  30743625 atttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggttcggttcatt 30743702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 40943614 - 40943695
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||| ||| ||  |||||||| ||||||||  ||||||||| ||||||||| ||| || |||||||    
T  40943614 atttggttcatgaaccaagtccaatgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggtttattgcca 40943695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 15822434 - 15822362
Alignment:
Q  70 ttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattc 142  Q
    |||| ||||||||||||||||||||  |||||| |||||||| || ||||||||| |||| |||||| |||||    
T  15822434 ttggatcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactattttcgaattggattgattc 15822362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 54432255 - 54432183
Alignment:
Q  77 atgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||| ||| ||  |||||||||||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  54432255 atgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgcca 54432183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 28687128 - 28687204
Alignment:
Q  71 tggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgc 147  Q
    |||||||||||||||||||||| ||  |||||| || ||||||||||||| ||  |||| |||| ||| ||||||||    
T  28687128 tggttcatgaaccaagttcaacaagcaaattattgagtcgagttccgaaccatattcgatttggttcgcttcattgc 28687204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 39135359 - 39135488
Alignment:
Q  28 ttcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaa 119  Q
    ||||||||||||| ||||| ||||||||| |||||||||         |||||||||||||||||||||||| ||  ||||| |||| |||| ||  |||    
T  39135359 ttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaa 39135458  T
Q  120 ctattatcgagttggatcgattcattgcca 149  Q
    ||||  ||||||||| ||| || |||||||    
T  39135459 ctatattcgagttggttcggtttattgcca 39135488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 41609887 - 41610023
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | || |||||| |||| |    
T  41609887 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 41609986  T
Q  114 tccgaactattatcgagttggatcgattcattgccaac 151  Q
      |||||||| |||||||||| ||| ||||||||||||    
T  41609987 gtcgaactataatcgagttgg-tcggttcattgccaac 41610023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 39469618 - 39469552
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||| |||||||||||||||||| |   ||||||||||||||| || ||||||||  |||||||||    
T  39469618 atttgattcatgaaccaagttcaatggaccaattatcgaatcgaattacgaactatattcgagttgg 39469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 45714749 - 45714830
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||| || ||||| |||||||||||| |||||| ||||||||| |  |||||| | |||||||||| ||  ||||||||||    
T  45714749 atttgatttatgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattgcca 45714830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 32689168 - 32689212
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  32689168 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 32689212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 52199388 - 52199432
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| |||||||||||| |||||| ||||||||| |||||||||    
T  52199388 ctcaagttcagctcatttgtttaacgaacttaattttcagctcaa 52199432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 3409329 - 3409194
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||         ||||||||||||||||||||||||||||| |||| |||||||||||    
T  3409329 ctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 3409230  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
    | ||||||||| ||||||||| ||| ||||||||||    
T  3409229 ttcgaactattgtcgagttggttcggttcattgcca 3409194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 40680218 - 40680343
Alignment:
Q  20 aactcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaa 119  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||||||   |||| ||||| ||| || ||||||||||||||||||||||||| |||||||    
T  40680218 aactcaaattcagctcatttatttaacgaacataattttcagctca---tttgattcat-aactaaattcaacgagtcaattatcgaatcgaattccgaa 40680313  T
Q  120 ctattatcgagttggatcgattcattgcca 149  Q
    ||||||| ||||||| ||| ||||||||||    
T  40680314 ctattattgagttggttcggttcattgcca 40680343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 44740569 - 44740489
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| || ||||||| ||||||||| ||| ||||||||||    
T  44740569 tttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgcca 44740489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 24844753 - 24844687
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||||    
T  24844753 atttggttcatgaaccaagttcaacgagataattgccgaatcgagtttcgaactattatcgagttgg 24844687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 30713209 - 30713290
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| |||| |||||||||||||||| || |||||  | |||||||||| ||| ||||||||||    
T  30713209 atttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgagttggttcggttcattgcca 30713290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 41332243 - 41332367
Alignment:
Q  35 catttatttaacaaacttaattctcagctcaatat--------ttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattat 126  Q
    |||||||||||||||||||||| |||||||||  |        |||||| |||||||||||||||| ||| |||| |||||||||||| ||||||||  |    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  127 cgagttggatcgattcattgccaac 151  Q
    |||||||| | | ||||||||||||    
T  41332343 cgagttggtttggttcattgccaac 41332367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 27464659 - 27464581
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||| |||||| | |||||||||||||| |||  ||||||||| ||||||||| ||| |||||||    
T  27464659 atttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcgagttggttcggttcattg 27464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 11027961 - 11028042
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| |||| ||||||||||||| || || |||||| | || ||||||| ||| ||||||||||    
T  11027961 atttggttcatgaaccaagttcgacgaatcaattatcgaattgaattacgaactctaattgagttggttcggttcattgcca 11028042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 29806959 - 29807040
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||   |||||||| |||| |||| ||| ||||||||||    
T  29806959 atttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattgcca 29807040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 11007059 - 11006983
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||  | ||||||| ||||||||| ||| |||||||    
T  11007059 atttggttcgtgaaccaagttcaacgaatcaattatcggatcgagt--caaactattttcgagttggttcggttcattg 11006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 20203801 - 20203722
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgc 147  Q
    ||||||||||||||||||||||||||| |||||| | ||||||| || |||||| | |||||||||| ||| || |||||    
T  20203801 atttggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaattgc 20203722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 17616320 - 17616397
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    |||||||||||| | ||| |||||||||  |||| |||||||||||| | ||||||| ||||||||| ||||||||||    
T  17616320 atttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcgagttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 13829931 - 13829974
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcga 111  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  13829931 atttggtttatgaaccaagttcaacgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 27902526 - 27902451
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattca 143  Q
    |||| ||||||||||||||||| |||| |||||| ||||||||| || |||||| | |||||||||| ||| ||||    
T  27902526 attttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttca 27902451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 17369075 - 17368999
Alignment:
Q  70 ttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||| ||| || |||||||||| |||| |||| | ||||||||||||||  ||||||||| ||| |||||||    
T  17369075 ttggttcataaactaaattcaacgagttaattgtcgagttgagttccgaactatattcgagttggctcggttcattg 17368999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 2647060 - 2646981
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcc 148  Q
    ||||||||||||||||||||||||||   ||||| ||| |||||||| ||||| |  | |||||| |||| |||||||||    
T  2647060 tttggttcatgaaccaagttcaacgaactaattaccgagtcgagttctgaactttatttgagttgtatcggttcattgcc 2646981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 9963812 - 9963891
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgc 147  Q
    |||||||||||||||| |||||||||||| |||| ||||||  |||| |||| |||||| || |||  ||| ||||||||    
T  9963812 atttggttcatgaacccagttcaacgagttaattgtcgaattaagtttcgaattattattgaattgactcggttcattgc 9963891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 27634670 - 27634805
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||| ||||||||||  | || |||||| |||| |    
T  27634670 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcgagtcgaat 27634769  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
      |||||||| |||||||||| ||| ||||||||||    
T  27634770 gtcgaactataatcgagttggttcggttcattgcca 27634805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 40458974 - 40459052
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||| ||||||||||||||| |  ||||||| |||||||||  | ||||||| || |||||| ||| |||||||    
T  40458974 atttggttcgtgaaccaagttcaacaaaccaattattgaatcgagtatcaaactattttcaagttggttcggttcattg 40459052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 34116260 - 34116179
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||| |||||| || | ||||||||  |||||| || |||||| | |||||||||| |||  |||||||||    
T  34116260 atttggttcatgaactaagttcgacaaatcaattattaaatcgaattacgaactctaatcgagttggttcggctcattgcca 34116179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 14103319 - 14103367
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttc 115  Q
    ||||||| |||||||||||||| ||||||| |||||| || ||||||||    
T  14103319 tatttggctcatgaaccaagttaaacgagttaattattgagtcgagttc 14103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 33831494 - 33831538
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  33831494 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 33831538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 34064704 - 34064748
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  34064704 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 34064748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 16742474 - 16742362
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| ||| ||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  16742474 atatacaactcaagttcagctcatttatttaacgaacttaattttcaactca---tttggttcatgaaccaagttcaacgaatcaattgccgaatcgagt 16742378  T
Q  114 tccgaactattatcga 129  Q
    || |||||||||||||    
T  16742377 tctgaactattatcga 16742362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 27891387 - 27891517
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaatat-------ttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttc 115  Q
    ||||||||||||||||||||||||||| || ||| |||||||||  |       || |||||||||||||||||||||||| |||| |||||||||||||    
T  27891387 tcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcatttgttcatgaaccaagttcaacgagttaattgtcgaatcgagttc 27891486  T
Q  116 cgaactattatcgagttggatcgattcattg 146  Q
    ||||||||| ||||||||  |||||||||||    
T  27891487 cgaactattgtcgagttgattcgattcattg 27891517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 11055367 - 11055235
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||| ||||||||||||||| ||||||||| || ||||||         |||||||||||||||||||||||| |||| ||||||||||||||||    
T  11055367 ctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagt 11055268  T
Q  114 tccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||| ||||||||| ||| |||||||    
T  11055267 tccgaactattgtcgagttggttcggttcattg 11055235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 12673115 - 12673032
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||||| ||| ||||||||||||    
T  12673115 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgccaac 12673032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 9959339 - 9959462
Alignment:
Q  19 caactcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccga 118  Q
    |||||||| ||||||| ||||||||||| ||||||||| ||||||||   |||| ||||||||| ||||||||||||| | |||| |||||||||| |||    
T  9959339 caactcaagttcagcttatttatttaacgaacttaattttcagctca---tttgattcatgaac-aagttcaacgagttatttatagaatcgagtttcga 9959434  T
Q  119 actattatcgagttggatcgattcattg 146  Q
    |||||| ||||||||| ||| |||||||    
T  9959435 actattgtcgagttggttcggttcattg 9959462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 26632936 - 26633069
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||||         |||||||| |||| ||||||||||||||| |||| ||||||||||||    
T  26632936 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagtt 26633035  T
Q  115 ccgaactattatcgagttggatcgattcattgcc 148  Q
     ||||||||||||||||||| ||| |||||||||    
T  26633036 acgaactattatcgagttggttcggttcattgcc 26633069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 22184503 - 22184637
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaatat--------ttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||| |||||||||||| |||||| ||||||||| |||||||||  |        ||||||||||||||||||||||||||| |||| |||||||||||     
T  22184503 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 22184602  T
Q  115 ccgaactattatcgagttggatcgattcattgcca 149  Q
    || ||||||| ||||||||| ||| ||||||||||    
T  22184603 ccaaactattgtcgagttggttcggttcattgcca 22184637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 51995131 - 51995212
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  51995131 atttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaactattttcgagttggttcggttcattgcca 51995212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 80550 - 80631
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||||||  |||||| |||||| | || ||||||||| ||||||||||||| ||||||||||    
T  80550 atttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcgaactattttcgagttggatcggttcattgcca 80631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 46944631 - 46944540
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaatag 159  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||| | ||||||| ||| ||||||| || | |||||||    
T  46944631 atttggttcatgaaccaagttcaacgagccaattatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagccctaatag 46944540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 49405722 - 49405644
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||| ||| ||||| ||| |||||||    
T  49405722 atttggttcataaaccaagttcaacgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattg 49405644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 38791745 - 38791825
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||||| |||| |||||| || |||| ||||||| ||||||||| ||| ||||||||||    
T  38791745 atttggttcatgaaccaagttcaacgagttaattgtcgaattga-ttccaaactattgtcgagttggttcggttcattgcca 38791825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 28265759 - 28265679
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||  ||||||||| ||||||||| ||  ||||||||||    
T  28265759 tttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgcca 28265679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 43387268 - 43387391
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaacta 122  Q
    |||| |||||||||||| ||||||  | |||||| ||||||   | ||||||||||||||||| |||||||||| |||| ||||||| ||| |  |||||    
T  43387268 tcaagttcagctcatttgtttaacggatttaattttcagct---tgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcctaaacta 43387364  T
Q  123 ttatcgagttggatcgattcattgcca 149  Q
    || ||||||||| ||| ||||||||||    
T  43387365 ttgtcgagttggttcggttcattgcca 43387391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 36156381 - 36156298
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    |||||||||| |||||||||||||||| |||||| ||||||||| || |||||| | |||||||||| ||| ||||||| ||||    
T  36156381 atttggttcaagaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgtcaac 36156298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 50147005 - 50146926
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgc 147  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| || |||||| | ||||| |||| ||| ||||||||    
T  50147005 atttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgaattggttcggttcattgc 50146926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 52813655 - 52813742
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaa 156  Q
    |||||||||||||||||||||||||||| |||| || ||| |||| || ||||||| ||||||||| ||| ||||||| |||| ||||    
T  52813655 tttggttcatgaaccaagttcaacgagttaattgtcaaatagagtcccaaactattgtcgagttggttcggttcattgtcaaccctaa 52813742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 9222209 - 9222136
Alignment:
Q  78 tgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    |||||||||||||||||  ||||| |||||||||||  ||||||||| ||||||||| ||| ||||||||||||    
T  9222209 tgaaccaagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattgccaac 9222136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 13761852 - 13761905
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaact 121  Q
    |||||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  13761852 atttggttcatgaaccaagtccaacgagttaattgtcgaatcgagttccgaact 13761905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 38493120 - 38493032
Alignment:
Q  20 aactcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcga 111  Q
    ||||||| |||| |||||||| ||||||||||||||| |||||||   |||||||||||||||||| |||||| ||| |||| |||| ||||    
T  38493120 aactcaagttcaactcatttaattaacaaacttaattttcagctc---atttggttcatgaaccaaattcaacaagttaattgtcgagtcga 38493032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 40797883 - 40797964
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||| ||  ||||||||||||| |||  ||||||||| | ||||||| ||| ||||||||||    
T  40797883 atttggttcatgaaccaagttcaatgaaccaattatcgaatcaagtatcgaactatttttgagttggttcggttcattgcca 40797964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 22721381 - 22721461
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||| ||   ||||| |||||||||||||||||| |  ||||||||  ||||||||||||||    
T  22721381 tttggttcatgaaccaagttcaatgaactaattaccgaatcgagttccgaactttattcgagttgtctcgattcattgcca 22721461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 48151275 - 48151134
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcg 105  Q
    |||| |||||||| |||  || ||||||||||| ||||||||| |||||||||         ||||||||  ||||||||||||||| ||  |||| |||    
T  48151275 atatacaactcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcg 48151176  T
Q  106 aatcgagttccgaactattatcgagttggatcgattcattgc 147  Q
    ||||||||| ||||||||| ||||||||| |||| |||||||    
T  48151175 aatcgagtttcgaactattgtcgagttggttcgaatcattgc 48151134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 24007986 - 24007912
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||| ||||| ||| |||||| |  ||||||||| ||||||||| || ||||||||    
T  24007986 ggttcatgaaccaagttcaacgaatcaatcatcaaatcgaatctcgaactattttcgagttggttcaattcattg 24007912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 51408036 - 51407970
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||||||||||||||| ||||| | ||||| ||||||||||  ||||||||| |||||||||    
T  51408036 atttggttcatgaaccaagttgaacgaattaattaccgaatcgagtctcgaactattttcgagttgg 51407970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 55892071 - 55892006
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||  ||||||||| | |||||||    
T  55892071 tttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactatttttgagttgg 55892006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 28470872 - 28470919
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttc 115  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  28470872 atttggttcatgaaccaagttcaacgaattaattaccgaatcgagttc 28470919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 34980591 - 34980525
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||| |||||||| ||||||||| || ||||||||||||||||||  | ||||||| |||||||||    
T  34980591 atttgattcatgaatcaagttcaatgaatcaattatcgaatcgagtctcaaactattttcgagttgg 34980525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 39736735 - 39736801
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttg 133  Q
    |||||||| | |||||||| |||||||| ||||||||||||||||||  | ||||||| ||||||||    
T  39736735 tatttggtccgtgaaccaaattcaacgaatcaattatcgaatcgagtctcaaactattttcgagttg 39736801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 43812144 - 43812098
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||    
T  43812144 atttggttcatgaaccaagttcgacgaatcaattgtcgaatcgagtt 43812098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 48339186 - 48339108
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||| ||||||||||||||||||| | ||| || ||||||||| || |||||| | || ||||||| |||||||||||    
T  48339186 atttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattg 48339108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 19455245 - 19455184
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcga 129  Q
    ||||| ||||||||||||||||||||| | |||| || ||||||||| ||||||||| ||||    
T  19455245 atttgattcatgaaccaagttcaacgaattaattgtcaaatcgagtttcgaactattttcga 19455184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 43798310 - 43798265
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||    
T  43798310 atttggttcaagaaccgagttcaacgagttaattatcgaatcgagt 43798265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 15697171 - 15697092
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||| |||||||||||| |||||| |||| ||||||  |||||| |  ||||||||  ||| |||||||    
T  15697171 tatttggttcatgaatcaagttcaacgaatcaattgtcgagtcgagtctcgaactttattcgagttgtctcggttcattg 15697092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 19852977 - 19853109
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | || |||||| |||| |    
T  19852977 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 19853076  T
Q  114 tccgaactattatcgagttggatcgattcattg 146  Q
      | |||||| |||||||||| |||||||||||    
T  19853077 gtcaaactataatcgagttggttcgattcattg 19853109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 54170947 - 54170888
Alignment:
Q  159 gagattgaaactttttgaaattggtcaaactataatgaacgaatcagaatcgttagatca 218  Q
    |||||||||||||| ||| |||| ||||||| ||| |||| |||||||||||| ||||||    
T  54170947 gagattgaaactttgtgacattgttcaaactgtaaggaacaaatcagaatcgtaagatca 54170888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 53369871 - 53370006
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | || |||||| | || |    
T  53369871 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaat 53369970  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
      |||||||| |||||||||| ||| ||||||||||    
T  53369971 gtcgaactataatcgagttggttcggttcattgcca 53370006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 6866190 - 6866149
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatc 109  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  6866190 atttggttcatgaaccaagtttgacgaatcaattatcgaatc 6866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 21441580 - 21441722
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa--------tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | |  |||||| |||| |    
T  21441580 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 21441679  T
Q  114 tccgaactattatcgagttggatcgattcattgccaacactaa 156  Q
      |||||||| |||||||||| ||| ||||||| |||| ||||    
T  21441680 gtcgaactataatcgagttggttcggttcattgtcaaccctaa 21441722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 48977633 - 48977710
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||| ||||||||||| | || |||||| |||| |  |||| ||| |||||||||| ||| ||||||||||    
T  48977633 ggttcatgaacgaagttcaacgaattaaatatcgagtcgaatgtcgaattataatcgagttggttcggttcattgcca 48977710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 12789693 - 12789649
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  12789693 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 12789649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 44791384 - 44791340
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||||||||||||||||| ||||| ||||||||| |||| ||||    
T  44791384 ctcaaattcagctcatttaattaacgaacttaattttcagttcaa 44791340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 50606007 - 50606051
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  50606007 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 50606051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 52706271 - 52706351
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||| |||||   ||||| ||| || ||||||||| | |  |||||||| |||| ||||||||||    
T  52706271 tttggttcatgaaccaagtttaacgaactaattaccgagtcaagttccgaattttattcgagttgtatcggttcattgcca 52706351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 53369687 - 53369731
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  53369687 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 53369731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 33124700 - 33124834
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||||||||||||||||||||||| ||||||||| |||||||||         ||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  33124700 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtt 33124799  T
Q  115 ccgaactattatcgagttggatcgattcattgcca 149  Q
     | ||||||| ||||||||| ||| ||||||||||    
T  33124800 tcaaactattgtcgagttggttcggttcattgcca 33124834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 33935567 - 33935647
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||| ||||||||||||||    
T  33935567 tttggttcatgaaccaagttcaacgagttaattatcgaatcgagtcccaaactattgtcgagttggttcgattcattgcca 33935647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 41449747 - 41449864
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    |||| |||||||| ||||||| ||||||||||| || |||||| ||||||||   ||||| |||||||||||||||||||||  |||| |||||||||||    
T  41449747 atatacaactcaagttcagctaatttatttaacgaatttaattttcagctca---tttggatcatgaaccaagttcaacgagataattgtcgaatcgagt 41449843  T
Q  114 tccgaactattatcgagttgg 134  Q
    | ||||||||| |||||||||    
T  41449844 ttcgaactattgtcgagttgg 41449864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 22075068 - 22075202
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||         ||||||||| ||||||| ||||||||||| |||| ||||||||||||    
T  22075068 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagtt 22075167  T
Q  115 ccgaactattatcgagttggatcgattcattgcca 149  Q
    |  ||||||||||||||||| ||| ||||||||||    
T  22075168 ctaaactattatcgagttggttcggttcattgcca 22075202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 10618925 - 10619061
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||         |||| |||||||||||||||||||||||| |||| |||||||||||    
T  10618925 ctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagt 10619024  T
Q  114 tccgaactattatcgagttggatcgattcattgccaa 150  Q
    ||| ||||||| ||||||||  ||| ||||| |||||    
T  10619025 tccaaactattgtcgagttgattcggttcatagccaa 10619061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 18250080 - 18249999
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||   |||||||| ||||||||| ||| ||||||||||    
T  18250080 atttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgagttggttcggttcattgcca 18249999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 21760670 - 21760593
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| ||||||    
T  21760670 atttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtttcgaactattttcgagttggttcggttcatt 21760593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 44421987 - 44421910
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| || ||||||| ||||||||| ||| |||||||    
T  44421987 tttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattg 44421910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 46573699 - 46573618
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||| |||| | ||||||| ||| ||||||||||    
T  46573699 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaattatttttgagttggttcggttcattgcca 46573618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 49034311 - 49034230
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||||||  |||||| |||||||| || ||||||||| ||||||||||||| ||| ||||||    
T  49034311 atttggttcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactattttcgagttggatcggttcgttgcca 49034230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 26719873 - 26719951
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||| ||| ||  |||||||||||||||||  ||||||||| ||||||||| |||||||||||    
T  26719873 atttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcgattcattg 26719951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 35543643 - 35543565
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||| |||||||||||||||||||||| ||||||||||||| ||||  | ||||||| ||||||||| |||||||||||    
T  35543643 atttagttcatgaaccaagttcaacgaatcaattatcgaatggagtctcaaactattttcgagttggttcgattcattg 35543565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 222312 - 222232
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||| |||||||||| |||| ||||||| ||| || ||||||| ||||||||| ||| ||||||||||    
T  222312 tttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcccaaactattgtcgagttggttcggttcattgcca 222232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 18740305 - 18740225
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcc 148  Q
    ||||||||||||||||||||| || |||||||||||| |||||| |  ||||||||| ||||||||| ||| |||||||||    
T  18740305 atttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatctcgaactattttcgagttggttcggttcattgcc 18740225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 17025448 - 17025357
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaatag 159  Q
    ||||||||| ||||||||||||||||||||||||||||||||||     |||||||| ||||||||| ||| ||||||| || | |||||||    
T  17025448 atttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaaccttgaactattttcgagttggttcggttcattgtcagccctaatag 17025357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 23227148 - 23227020
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcg 105  Q
    |||| |||||||| ||| ||||||||||||||| ||||||||| |||||||||         ||||| |||||| |||||||||||| ||  |||| |||    
T  23227148 atatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcg 23227049  T
Q  106 aatcgagttccgaactattatcgagttgg 134  Q
    ||||||||| ||||||||| |||||||||    
T  23227048 aatcgagtttcgaactattgtcgagttgg 23227020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 23236301 - 23236173
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcg 105  Q
    |||| |||||||| ||| ||||||||||||||| ||||||||| |||||||||         ||||| |||||| |||||||||||| ||  |||| |||    
T  23236301 atatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcg 23236202  T
Q  106 aatcgagttccgaactattatcgagttgg 134  Q
    ||||||||| ||||||||| |||||||||    
T  23236201 aatcgagtttcgaactattgtcgagttgg 23236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 24128587 - 24128504
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||  ||||||  | ||| ||||||||||||    
T  24128587 atttggttcatgaaccaaattcaacgagttaattatcgaatcaagttccgaaatatgttcgagtgtgttcggttcattgccaac 24128504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 48634443 - 48634570
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcg 105  Q
    ||||||||||||| |  | |||||||||||||| ||||||||| | |||||||         ||||||||||||||||||||||||||||| |||   ||    
T  48634443 atattcaactcaattctaactcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaatctacg 48634542  T
Q  106 aatcgagttccgaactattatcgagttg 133  Q
    |||||||||| |||||||| ||||||||    
T  48634543 aatcgagttctgaactattgtcgagttg 48634570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 45055787 - 45055867
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||   ||||| ||| |||||||||||||| |  |||||||| |||| ||||||||||    
T  45055787 tttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgcca 45055867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 33019358 - 33019437
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||| ||| |||||||||||||||||  |||||||||||||||||  ||||||||| | ||||||| ||| |||||||    
T  33019358 tatttgattcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcattg 33019437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 3942234 - 3942312
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||||| || |||| | ||||||||| || |||||| | |||||||||| ||| |||||||    
T  3942234 atttggttcatgaaccaagttcaatgaatcaactgtcgaatcgaattacgaactttaatcgagttggttcggttcattg 3942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 36472497 - 36472575
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||  | |  |||| ||||||||| ||| |||||||    
T  36472497 atttggttcatgaaccaagttcaacgaatcatttatcgaatcgagtatcaagttattttcgagttggttcggttcattg 36472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 5776271 - 5776129
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | || |||||| |||| |    
T  5776271 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 5776172  T
Q  114 tccgaactattatcgagttggatcgattcattgccaacactaa 156  Q
      |||||||| |||||||||| ||| |||||||||||| ||||    
T  5776171 gtcgaactataatcgagttggttcggttcattgccaaccctaa 5776129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 11595882 - 11595805
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||   ||||| ||| |||||||||||||| |  |||||||| |||| |||||||    
T  11595882 tttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 11595805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 37334282 - 37334419
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | || ||||||||||| |    
T  37334282 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgaatcgaat 37334381  T
Q  114 tccgaactattatcgagttggatcgattcattgccaac 151  Q
      |||||||| |||||||||| ||| ||||||| ||||    
T  37334382 gtcgaactataatcgagttggttcggttcattgtcaac 37334419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 43052934 - 43053013
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    ||||||||||||||||||||||  | || |||||| |||| |  |||||||| |||||||||| ||| ||||||||||||    
T  43052934 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccaac 43053013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 33171683 - 33171540
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcg 105  Q
    |||| |||||||| ||| ||||||||||||||  ||||||||| | |||||||         ||||||||||| || |||||||||| ||  |||| ||     
T  33171683 atatacaactcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtct 33171584  T
Q  106 aatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
     |||||||| ||||||||||||||||||| |||  |||||||||    
T  33171583 tatcgagtttcgaactattatcgagttggttcggatcattgcca 33171540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 665988 - 665944
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||    
T  665988 ctcaaattcagctcatttaattaacgaacttaattttcagctcaa 665944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 32357019 - 32357075
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactatt 124  Q
    |||| ||||||||| |||||||||||| | ||||||||||||||||  |||||||||    
T  32357019 atttagttcatgaatcaagttcaacgaattaattatcgaatcgagtctcgaactatt 32357075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 40480136 - 40480084
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaact 121  Q
    ||||||||||||||||||||||||||   ||||| ||| ||||||||||||||    
T  40480136 tttggttcatgaaccaagttcaacgaactaattaccgactcgagttccgaact 40480084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 33140883 - 33140824
Alignment:
Q  74 ttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttg 133  Q
    ||||||||||||||||||||||| |||| || | |||| |||||||||||  ||||||||    
T  33140883 ttcatgaaccaagttcaacgagttaattgtcaagtcgaattccgaactatgttcgagttg 33140824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 7447934 - 7448012
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||||| ||  ||||| |||| |||| ||  |||||||  ||||||||| ||| |||||||    
T  7447934 atttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggttcattg 7448012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 33899031 - 33898953
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||| ||| ||   |||| ||||||||| |  ||||||||| ||||||||| ||| |||||||    
T  33899031 atttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatcgaactattttcgagttggttcggttcattg 33898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 37401653 - 37401587
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    |||||||||||||| |||||||||| | |||||| ||||||||| || |||||| | ||||| ||||    
T  37401653 atttggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaactctaatcgaattgg 37401587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 36927061 - 36927138
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||  | |  |||||| |||| |  |||||||| |||||||||| ||| ||||||||||    
T  36927061 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 36927138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 45176304 - 45176381
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||||||  | ||||||||| |||| |  | |||||| |||||||| | ||| |||||||    
T  45176304 tttggttcatgaaccaagttcaacggattaattatcgagtcgaatgtcaaactataatcgagtttgttcggttcattg 45176381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 2466598 - 2466526
Alignment:
Q  73 gttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    |||| ||||||||||||||| ||| || | |||||   |||||| ||||||||||||||||  ||||||||||    
T  2466598 gttcgtgaaccaagttcaacaagttaaatgtcgaactaagttccaaactattatcgagttgattcgattcatt 2466526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 3930857 - 3930813
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  3930857 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 3930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 5795077 - 5795033
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  5795077 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 5795033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 15434247 - 15434291
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  15434247 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 15434291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 17608770 - 17608845
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||| |||||||||| |||| ||||||   ||||||| || |||||| |||||||||||  ||| |||||||    
T  17608770 atttggttcatcaaccaagttcgacgaatcaatt---gaatcgaattacgaacttttatcgagttgattcggttcattg 17608845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 37106884 - 37106972
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaa 156  Q
    ||||||| ||| ||| |||||| |||| | |||||||||||||| || |||||| | || |||| || ||| |||||||||||| ||||    
T  37106884 atttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggttcggttcattgccaaccctaa 37106972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 42072087 - 42072131
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  42072087 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 42072131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 44994113 - 44994061
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    |||| |||||||||||||||||| ||| ||| | ||||||||| |||||||||    
T  44994113 atatacaactcaaattcagctcaattagttagcgaacttaattttcagctcaa 44994061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 48505929 - 48505885
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  48505929 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 48505885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 1840828 - 1840691
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||         ||||||||||||||||||||||||||||| |||| |||||| ||||    
T  1840828 ctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgagt 1840729  T
Q  114 tccgaactattatcgagttggatcgattcattgccaac 151  Q
    || |||||||| ||||||||| ||| ||||||||||||    
T  1840728 tctgaactattgtcgagttggttcggttcattgccaac 1840691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 19282201 - 19282135
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||||||||||||||    
T  19282201 atttggttcatgaaccaagttcaacgagttaattgtcgaatgaagttccgaactattatcgagttgg 19282135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 32945108 - 32945030
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||| ||||||||| ||| |||||||    
T  32945108 atttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcgaactattttcgagttggttcggttcattg 32945030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 31021865 - 31021994
Alignment:
Q  25 aaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttcc 116  Q
    |||||||||||||||| |||||||||||||||   |||||||         ||||||||||||||||||  ||||||||| ||||||||| |||||||||    
T  31021865 aaattcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttcc 31021964  T
Q  117 gaactattatcgagttggatcgattcattg 146  Q
    |||||||  ||||||||| ||| |||||||    
T  31021965 gaactatattcgagttggttcggttcattg 31021994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 27196130 - 27196208
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||  ||||||||| ||||||||| ||| |||||||    
T  27196130 atttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtctcgaactattttcgagttggttcggttcattg 27196208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 40056497 - 40056384
Alignment:
Q  29 tcagctcatttatttaacaaacttaattctcagctcaa--------tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaac 120  Q
    |||||||||||||||||| ||||||||| ||| |||||        ||||||||||||||||||| |||||||||  |||| ||||||||| || | |||    
T  40056497 tcagctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaac 40056398  T
Q  121 tattatcgagttgg 134  Q
    ||||||||||||||    
T  40056397 tattatcgagttgg 40056384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 10327983 - 10328061
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||||  |||| ||| ||||||||| ||| |||||||    
T  10327983 atttggttcatgaatcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattg 10328061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 14500792 - 14500716
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    ||||||||||||||||||||||||||   ||||||||| |||||||||||||| |  |||||||| |||| ||||||    
T  14500792 tttggttcatgaaccaagttcaacgaactaattatcgagtcgagttccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 20189026 - 20189104
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||| |||| |||||||||||||| | || |||||| | |||||||||  ||| |||||||    
T  20189026 atttggttcatgaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttgattcggttcattg 20189104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 41783378 - 41783456
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||||||||   ||||| ||| |||||||||||||| |  |||||||| |||| |||||||    
T  41783378 atttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 41783456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 3801451 - 3801370
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||| ||  ||||| |||| |||| || ||||||||  ||||||||| ||| ||||||||||    
T  3801451 atttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgcca 3801370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 20190671 - 20190591
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| | || |||||||||||||||| || |||||| | || ||||||| ||| ||||||||||    
T  20190671 atttggttcatgaaccaagttcgatgaatcaattatcgaatcgaattacgaact-taatagagttggttcggttcattgcca 20190591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 27450664 - 27450587
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||| ||| |||||||| |||||||||||||||| |  || |||||| ||||||||| ||| ||||||||||    
T  27450664 ggttcatgaatcaaattcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcattgcca 27450587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 28431066 - 28431174
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaacta 122  Q
    |||| |||||||| ||||||||||   ||||||| ||| ||||   ||| |||||||||||||||||||| | ||||||||||||||| ||  |||||||    
T  28431066 tcaagttcagctcgtttatttaacgggcttaattttcaactca---tttagttcatgaaccaagttcaacaattcaattatcgaatcgtgtatcgaacta 28431162  T
Q  123 ttatcgagttgg 134  Q
    ||  ||||||||    
T  28431163 tttacgagttgg 28431174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 38523001 - 38522867
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||| ||||||||||||| ||||| ||||||||| |||||||||         |||||||||||||||||||||||| |   |||||||||| || | ||    
T  38523001 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtcaaatt 38522902  T
Q  115 ccgaactattatcgagttggatcgattcattgcca 149  Q
     ||||||||  ||||||||| ||| ||||||||||    
T  38522901 acgaactatattcgagttggttcggttcattgcca 38522867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 39414239 - 39414312
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    |||||||| |||||||||||||||| |||| ||||||  |||| ||||||||| ||||||||| ||| ||||||    
T  39414239 ggttcatggaccaagttcaacgagttaattgtcgaattaagtttcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 26218101 - 26218181
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||   ||||| ||| |||||||||||||| |  | |||||| |||| ||||||||||    
T  26218101 tttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttatttgagttgtatcggttcattgcca 26218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 34719739 - 34719663
Alignment:
Q  73 gttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||| |||||||||||| |||||||||||||| | |  || |||||| ||||||||| ||| ||||||||||    
T  34719739 gttcatgaatcaagttcaacgaatcaattatcgaatcaaatctcgcactattttcgagttggttcgtttcattgcca 34719663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 15933220 - 15933297
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||| | || | |||| |||| || ||||||||  ||||||||| ||| ||||||||||    
T  15933220 ggttcatgaaccaagttcaacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgcca 15933297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 26298368 - 26298445
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||| |||||||||||| |||||||||||||||| |  |  |||||| | ||||||| ||| ||||||||||    
T  26298368 ggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcacactatttttgagttggttcggttcattgcca 26298445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 26299904 - 26299977
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    ||||||||||  ||||||||||| |||||||||||||||| |  || |||||| ||||||||| ||| ||||||    
T  26299904 ggttcatgaatgaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 39407463 - 39407536
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    |||||||||| |||||||||||| |||||||||||||||| |  || |||||| | ||||||| ||| ||||||    
T  39407463 ggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 27906097 - 27906232
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | |  |||||| |||| |    
T  27906097 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 27906196  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
      |||||||| |||||||||| ||| ||||||||||    
T  27906197 gtcgaactataatcgagttggttcggttcattgcca 27906232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 34857406 - 34857488
Alignment:
Q  74 ttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaa 156  Q
    |||||||| |||||||||||| |||||||| |||| || |  |  |||||| ||||||||| ||| |||||||||||| ||||    
T  34857406 ttcatgaatcaagttcaacgaatcaattattgaattgaatctcacactattttcgagttggttcggttcattgccaaccctaa 34857488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 5382911 - 5382846
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||||  |||||| || || ||||||    
T  5382911 tttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttgg 5382846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 10494038 - 10494119
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||  |||||||||||||||||  ||||||| ||||||| |  | ||||||| | ||||||| ||| ||||||||||    
T  10494038 atttggtttgtgaaccaagttcaacgaaccaattattgaatcgaatatcaaactatttttgagttggttcggttcattgcca 10494119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 19716240 - 19716277
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatc 109  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  19716240 ggttcatgaatcaagttcaacgaatcaattatcgaatc 19716277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 36523808 - 36523849
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatc 109  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  36523808 atttggttcatgaaccaagttcaatgaatctattatcgaatc 36523849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 28247473 - 28247541
Alignment:
Q  78 tgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||| ||||||||| |||| | |  ||||||||| |||| |||| ||| |||||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattg 28247541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 32157077 - 32157010
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaa 91  Q
    |||| ||||||||||||| ||||| ||||||||| ||| |||||  ||||| ||||||| |||||||||    
T  32157077 tcaagttcagctcatttaattaacgaacttaattttcaactcaa-gtttggctcatgaaacaagttcaa 32157010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 34724837 - 34724761
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcc 148  Q
    |||||||||| |||||||||||| ||||||||| |||||| |  |  |||||| || |||||| ||| |||||||||    
T  34724837 ggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctcacactattttcaagttggttcggttcattgcc 34724761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 39414178 - 39414214
Alignment:
Q  20 aactcaaattcagctcatttatttaacaaacttaatt 56  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  39414178 aactcaagttcagctcatttatttaacgaacttaatt 39414214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 28006403 - 28006483
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcc 148  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||||| ||| |||||||||    
T  28006403 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgcc 28006483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 12224662 - 12224584
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||||| ||| |||||||    
T  12224662 atttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcattg 12224584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 15306546 - 15306627
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||||||||| || |||||| ||| ||||||||||    
T  15306546 atttggttcatgaaccaagttcaatgaattaattatcgaatcgagttccgaactattgtcaagttggttcggttcattgcca 15306627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 44596570 - 44596651
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||| ||||||||| ||| ||||||||||    
T  44596570 atttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactattgtcgagttggttcggttcattgcca 44596651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 20904069 - 20903971
Alignment:
Q  32 gctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagt 131  Q
    |||||||||||||||||| |||||| ||| ||   |||||||||||||||||||||||||||||| |||| | |||| ||||||| ||||||| ||||||    
T  20904069 gctcatttatttaacaaatttaattttcatct---tatttggttcatgaaccaagttcaacgagttaattgttgaattgagttccaaactattgtcgagt 20903973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 24575904 - 24576040
Alignment:
Q  18 tcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatc 109  Q
    ||||||||| |||  |||||||||||||||| ||||||| ||| |||||         ||||||||||||||||||||||||||||||||||||||||||    
T  24575904 tcaactcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatc 24576003  T
Q  110 gagttccgaactattatcgagttggatcgattcattg 146  Q
     | |  ||||||||| ||||||||| ||| |||||||    
T  24576004 aaatctcgaactattttcgagttggttcggttcattg 24576040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 31816621 - 31816699
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||| ||||||||| ||| |||||||    
T  31816621 atttggttcatgaaccaagttcaacgaatcaattaccgaattgagtttcgaactattttcgagttggttcggttcattg 31816699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 45581095 - 45581017
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| || |||||| ||| |||||||    
T  45581095 atttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcaagttggttcggttcattg 45581017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 5204556 - 5204479
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |  | ||||||| ||||||||| ||||||||||    
T  5204556 atttggttcacgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 6413292 - 6413373
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||| |  ||||||||| ||||||||| ||||||||||||||    
T  6413292 atttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgcca 6413373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 25124972 - 25124891
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| || |||||| | |||||||||| ||| ||||||||||    
T  25124972 atttggttcatgaaccaagttcaacgaatcaattatcaaatcgaattacgaactttaatcgagttggttcggttcattgcca 25124891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 35810771 - 35810852
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| || |||||| | |||||||||| ||| ||||||||||    
T  35810771 atttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgcca 35810852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 15014368 - 15014456
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaa 156  Q
    |||||||||||||| ||||||| |||| |||||||||||||||| || |||||| | |||||||||| ||| |||||||||||| ||||    
T  15014368 atttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcggttcattgccaaccctaa 15014456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 23915746 - 23915605
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcg 105  Q
    |||| |||||||| |||| |||||||||||||  ||||||||| |||||| ||         ||||||||||||||||||||||||||||  |||| | |    
T  23915746 atatacaactcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttg 23915647  T
Q  106 aatcgagttccgaactattatcgagttggatcgattcattgc 147  Q
    ||||||||| |||||| || ||||||||| ||||||||||||    
T  23915646 aatcgagtttcgaacttttgtcgagttggttcgattcattgc 23915605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 3577724 - 3577813
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaat 157  Q
    ||||| ||||||||||||||||||||||| || | |||||||||||||| ||||||| ||||||| | ||| ||||||| || |||||||    
T  3577724 atttgattcatgaaccaagttcaacgagttaactgtcgaatcgagttccaaactattgtcgagttagttcggttcattgtcagcactaat 3577813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 21680737 - 21680660
Alignment:
Q  74 ttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    ||||| ||||||||||||||||  ||||||||||||||||| ||||||||| ||||| ||| ||| ||||||||||||    
T  21680737 ttcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctggttcggttcattgccaac 21680660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 29677606 - 29677525
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||| |||||||||||||||||  |||||||| ||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  29677606 atttggttcgtgaaccaagttcaacgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggttcattgcca 29677525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 31869593 - 31869725
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||| ||||||||||||||| ||||||||| |||||| ||         ||||||||||||||||||||||||||| | |||| ||||||| |||    
T  31869593 ctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagt 31869692  T
Q  114 tccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||| |||| || | ||| |||||||    
T  31869693 tccgaactattgtcgaattagttcggttcattg 31869725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 47983308 - 47983391
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    ||||||||| ||||||||||||||| | |||||||||||||||| |  ||||||||| ||||||||| ||| ||||||| ||||    
T  47983308 atttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgtcaac 47983391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 7841676 - 7841753
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||  |||| |||| ||||||||| ||| |||||||    
T  7841676 atttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattg 7841753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 7956377 - 7956466
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaacactaat 157  Q
    |||| ||||||||||||||| ||| ||  |||||||||||| ||||  ||||||||| ||||||||| ||| |||||||||||| |||||    
T  7956377 attttgttcatgaaccaagtccaatgaaccaattatcgaattgagtatcgaactattttcgagttggttcggttcattgccaaccctaat 7956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 42916201 - 42916120
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| |||| |||||||||||||||| || |||||  | ||||| |||| ||| ||||||||||    
T  42916201 atttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattgcca 42916120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 7996028 - 7996107
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    |||| |||||||||||||||||| |||||||||||||||| |  ||||||||| || |||||| ||| ||||||| ||||    
T  7996028 ggtttatgaaccaagttcaacgaatcaattatcgaatcgaatctcgaactattttcaagttggttcggttcattgtcaac 7996107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 7596446 - 7596524
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||| |||||||||| |||| |||||||||||||| | || |||||| | |||||||||| ||| |||||||    
T  7596446 atttggttcataaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 14578672 - 14578594
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||| | |||||| || |||||| || |||||| | |||||||||| ||| |||||||    
T  14578672 atttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggttcggttcattg 14578594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 39802908 - 39802773
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||| ||||||||||||||| ||||||||| ||| |||||         ||||||||||||||||| ||||||||| | || |  |||| |||||    
T  39802908 ctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagt 39802809  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
      ||||||||| ||||||||| ||||||||||||||    
T  39802808 ctcgaactattttcgagttggttcgattcattgcca 39802773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 45653518 - 45653452
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    |||||||||||||||||||||||||||   |||| ||||||||||||  |||||||| |||||||||    
T  45653518 atttggttcatgaaccaagttcaacgaaataattgtcgaatcgagttttgaactattttcgagttgg 45653452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 50447394 - 50447460
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||||| ||||||||| ||||| | ||||||||||||||||  ||||||||| |||||||||    
T  50447394 atttggttcataaaccaagtttaacgaattaattatcgaatcgagtctcgaactattttcgagttgg 50447460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 19508582 - 19508659
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||||   ||||| ||| |||||||||||||| |  |||||||| |||| |||||||    
T  19508582 tttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 19508659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 46265031 - 46264950
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||| ||||||||||||||||| |||| |||||||||||||||| || |||||  | ||||| |||| ||| ||||||||||    
T  46265031 atttagttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattgcca 46264950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 51432225 - 51432144
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||| || |||||||| |||| | |||||||| |||||| |||| ||||||||| ||| ||||| ||||    
T  51432225 atttggttcatgaaccaggtacaacgagttaattgttgaatcgagctccgaattattgtcgagttggttcggttcatagcca 51432144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 7016162 - 7016084
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||  |||| | |  ||||||||| ||| |||||||    
T  7016162 atttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttggttcggttcattg 7016084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 14101916 - 14101982
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    ||||||||||||||| |||||||| |||  |||| ||||||||||||  ||||||||||| ||||||    
T  14101916 atttggttcatgaactaagttcaatgagataattgtcgaatcgagtttggaactattatcaagttgg 14101982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 14796643 - 14796705
Alignment:
Q  70 ttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagtt 132  Q
    ||||||||||||||| ||||||||| | ||||||||| || ||||||||||| | ||||||||    
T  14796643 ttggttcatgaaccacgttcaacgaattaattatcgagtcaagttccgaactttgatcgagtt 14796705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 14805517 - 14805579
Alignment:
Q  70 ttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagtt 132  Q
    ||||||||||||||| ||||||||| | ||||||||| || ||||||||||| | ||||||||    
T  14805517 ttggttcatgaaccacgttcaacgaattaattatcgagtcaagttccgaactttgatcgagtt 14805579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 15257258 - 15257180
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||| ||| ||  |||||||||||||||||  | ||||||| | ||||||| ||| |||||||    
T  15257258 atttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaactatttttgagttggttcggttcattg 15257180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 24469958 - 24469823
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | || |||||| |||| |    
T  24469958 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 24469859  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
      |||||||| |||||||||| ||| ||||||||||    
T  24469858 gtcgaactataatcgagttggttcggttcattgcca 24469823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 32179857 - 32179992
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||         ||| |||| |||||||||||||||||  | || |||||| |||| |    
T  32179857 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcgagtcgaat 32179956  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
      |||||||| |||||||||| ||| ||||||||||    
T  32179957 gtcgaactataatcgagttggttcggttcattgcca 32179992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 38061261 - 38061184
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||| || |||||||||||| ||||||||| |||||| |  || |||||| ||||||||| ||| ||||||||||    
T  38061261 ggttcataaatcaagttcaacgaatcaattatcaaatcgaatctcgcactattttcgagttggttcggttcattgcca 38061184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 40159717 - 40159636
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||| |||||||||||||| ||| ||  ||||||||||||||| |  | ||||||| ||||||||| ||| ||||||||||    
T  40159717 atttgattcatgaaccaagtccaatgaaccaattatcgaatcgaatatcaaactattttcgagttggttcggttcattgcca 40159636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 42937127 - 42937208
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||| |||||||||||||||| |||| |||||| | ||||||| || |||||| | |||||||||| ||  ||||||||||    
T  42937127 atttgattcatgaaccaagttcgacgaatcaattgttgaatcgaattacgaactctaatcgagttggttcagttcattgcca 42937208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 51432352 - 51432239
Alignment:
Q  14 atattcaactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcg 105  Q
    |||| |||||||| ||||||| ||||||||||| |  |||||| |||||| |||        |||||||||||||||||||| |||||||| |||| | |    
T  51432352 atatacaactcaagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaacgagttaattgttg 51432253  T
Q  106 aatcgagttccgaa 119  Q
    ||||||| ||||||    
T  51432252 aatcgagctccgaa 51432239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 7702894 - 7702969
Alignment:
Q  74 ttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||  | || |||||| |||| |  |||||||| |||||||||| ||| ||||||||||    
T  7702894 ttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 7702969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 47603003 - 47602871
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaata--------tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||          || ||||||||||||||||||||||  | || |||||| |||| |    
T  47603003 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 47602904  T
Q  114 tccgaactattatcgagttggatcgattcattg 146  Q
      |||||||| |||||||||| ||| |||||||    
T  47602903 gtcgaactataatcgagttggttcggttcattg 47602871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 23916863 - 23916929
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttgg 134  Q
    |||||||| ||||||||||||  | || |||||||||||||||| || |||||| | ||||||||||    
T  23916863 atttggttaatgaaccaagtttgatgaatcaattatcgaatcgaattacgaactttaatcgagttgg 23916929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 29113613 - 29113579
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaatt 101  Q
    |||||||||||||||||||||||||||| ||||||    
T  29113613 tatttggttcatgaaccaagttcaacgaatcaatt 29113579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 36119124 - 36119202
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||| |||||||||| |||||  |||| ||||||||| || ||||||||| |  |||||| ||| |||||||    
T  36119124 atttggttcataaaccaagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcattg 36119202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 36419100 - 36419235
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||||||||||||| ||||| ||||||||| || ||||||         ||| |||||||||||||||||| |||  | || |||||| |||| |    
T  36419100 ctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcgagtcgaat 36419199  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
      |||||||| |||||||||| ||| ||||||||||    
T  36419200 gtcgaactataatcgagttggttcggttcattgcca 36419235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 572502 - 572425
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||  ||||||||||||||| | ||||||||||| ||||||  |||||| |  ||||||| | |||||||||||    
T  572502 tttggtttttgaaccaagttcaacaaatcaattatcgagtcgagtctcgaactttgttcgagtttgctcgattcattg 572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 37441327 - 37441283
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  37441327 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 37441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 43087552 - 43087500
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaact 121  Q
    |||||||||||||||||||||||| |   ||||| ||| ||||||||||||||    
T  43087552 tttggttcatgaaccaagttcaacaaactaattaccgagtcgagttccgaact 43087500  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 48575166 - 48575122
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    |||||||||||||||||||||||||| | ||||| ||||| ||||    
T  48575166 tttggttcatgaaccaagttcaacgaattaattaccgaattgagt 48575122  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 3307933 - 3308068
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||| ||| ||||||||||||||| ||||||||| || ||||||         ||||||||||||||| |||||| |||||| |||| |||||||||||    
T  3307933 ctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagt 3308032  T
Q  114 tccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||| ||||||||| ||| ||||||||||    
T  3308033 tccgaactattgtcgagttggttcggttcattgcca 3308068  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 9412667 - 9412530
Alignment:
Q  20 aactcaaattcagctcatttatttaacaaacttaattctcagctcaat--------atttggttcatgaaccaagttcaacgagtcaattatcgaatcga 111  Q
    |||||||||||||||||||||| |||| || |||||||||| |||||         |||||||||||||||||||||||||||||  ||| |||| ||||    
T  9412667 aactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacgagttcattgtcgagtcga 9412568  T
Q  112 gttccgaactattatcgagttggatcgattcattgcca 149  Q
    | ||| |||||| |||||||||| ||| ||||||||||    
T  9412567 gctccaaactataatcgagttggttcggttcattgcca 9412530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 39478103 - 39478184
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||| ||| ||  |||||||||||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  39478103 atttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgcca 39478184  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 43384847 - 43384926
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgc 147  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |  ||||||||| ||||||||| ||| ||||||||    
T  43384847 atttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgc 43384926  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 33280064 - 33279986
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||| |||| |||||||||||||| | || |||||| | |||||||||| ||| |||||||    
T  33280064 atttggttcatgaaccaagttcgacgaatcaattatcgaatcaaattacgaactttaatcgagttggttcggttcattg 33279986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 32740692 - 32740769
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcatt 145  Q
    |||||||||||||||||| ||||| |||| |||| |||||| ||||||| ||||||| ||||||||| ||| ||||||    
T  32740692 atttggttcatgaaccaaattcaatgagttaattgtcgaattgagttccaaactattgtcgagttggttcggttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 22564058 - 22564140
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||||||||  |||||| |||||| | || | || |||| ||||||||||||| ||| ||||||    
T  22564058 tatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcaaattattttcgagttggatcggttcgttgcca 22564140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 27189169 - 27189104
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttg 133  Q
    |||||||||||||||||||||| |||| |||||||||||||| | || |||||| | |||||||||    
T  27189169 atttggttcatgaaccaagttcgacgaatcaattatcgaatctaattacgaactctaatcgagttg 27189104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 1091781 - 1091825
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagt 113  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||    
T  1091781 tttggttcatgaatcaagttcaacgaattaattatcgaatcgagt 1091825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 34655089 - 34655169
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||| ||||||||| |   ||||| ||| |||||||||||||| |  |||||||| |||| ||||||||||    
T  34655089 tttggttcatgaactaagttcaacaaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgcca 34655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 12378405 - 12378444
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaa 107  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  12378405 atttggttcgtgaaccaagttcaacgaatcaattatcgaa 12378444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 9136004 - 9136070
Alignment:
Q  67 tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttg 133  Q
    |||||| ||||| ||||||||||||||||| |||| |||| ||||||||  ||||||| | ||||||    
T  9136004 tatttgattcataaaccaagttcaacgagttaattgtcgagtcgagttctaaactatttttgagttg 9136070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 23181208 - 23181254
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  23181208 atttggttcatgaaccaaattcgacgaatcaattgtcgaatcgagtt 23181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 28492787 - 28492722
Alignment:
Q  28 ttcagctcatttatttaacaaacttaattctcagctcaatatttggttcatgaaccaagttcaacga 94  Q
    |||| ||||||||| |||  ||||||||| ||| ||||| ||||||||||||||||||||| |||||    
T  28492787 ttcaactcatttatctaatgaacttaattttcaactcaa-atttggttcatgaaccaagtttaacga 28492722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 453540 - 453617
Alignment:
Q  72 ggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||||||||  | |  |||||| |||| |  |||||||| |||||||||| ||| ||||||||||    
T  453540 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 453617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11161571 - 11161615
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  11161571 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 11161615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 43967564 - 43967644
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    ||||||||||||||||| ||||||||   |||||  || |||||||||||||| |  || ||||| |||| ||||||||||    
T  43967564 tttggttcatgaaccaaattcaacgaactaattactgagtcgagttccgaactttgttcaagttgtatcggttcattgcca 43967644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 21141 - 21218
Alignment:
Q  69 tttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||||| ||| |||||||    
T  21141 tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtctcgaactattttcgagttggttcggttcattg 21218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 14479 - 14557
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||| ||| ||||| ||| |||||||    
T  14479 atttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattg 14557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 11443 - 11521
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||||||||||||| |||||| |||||  |||| |||||||||||||| ||||||||||||||||| ||| |||||||    
T  11443 atttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactattatcgagttggttcggttcattg 11521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 7395 - 7314
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgcca 149  Q
    |||||||||||||||||||||| |||| |||||||||||||||| || |||||  | ||||| |||| ||| ||||||||||    
T  7395 atttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattgcca 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 32862 - 32789
Alignment:
Q  78 tgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattgccaac 151  Q
    |||||||||||||||||  ||||| |||||||||||  ||||||||| ||||||||| ||| ||||||||||||    
T  32862 tgaaccaagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattgccaac 32789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 124621 - 124487
Alignment:
Q  23 tcaaattcagctcatttatttaacaaacttaattctcagctcaa--------tatttggttcatgaaccaagttcaacgagtcaattatcgaatcgagtt 114  Q
    |||||||||||||||||| ||||||||||||||  |||||||||         |||||||||||||||||||||||| |   ||||| |||| || | ||    
T  124621 tcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatt 124522  T
Q  115 ccgaactattatcgagttggatcgattcattgcca 149  Q
     ||||||||  ||||||||| ||| ||||||||||    
T  124521 tcgaactatattcgagttggttcggttcattgcca 124487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 26708 - 26630
Alignment:
Q  68 atttggttcatgaaccaagttcaacgagtcaattatcgaatcgagttccgaactattatcgagttggatcgattcattg 146  Q
    ||||| ||||||||||||||||||| | ||| || ||||||||| || |||||| | || ||||||| |||||||||||    
T  26708 atttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattg 26630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 19295 - 19339
Alignment:
Q  22 ctcaaattcagctcatttatttaacaaacttaattctcagctcaa 66  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  19295 ctcaagttcagctcatttaattaacgaacttaattttcagctcaa 19339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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