View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5933_low_23 (Length: 262)

Name: NF5933_low_23
Description: NF5933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5933_low_23
NF5933_low_23
[»] chr5 (30 HSPs)
chr5 (14-159)||(26077646-26077791)
chr5 (135-246)||(40079979-40080091)
chr5 (166-246)||(14057738-14057818)
chr5 (166-246)||(19344653-19344733)
chr5 (136-246)||(30721639-30721750)
chr5 (183-246)||(33402545-33402608)
chr5 (133-246)||(9936842-9936956)
chr5 (137-246)||(14633007-14633117)
chr5 (137-246)||(27675540-27675650)
chr5 (166-246)||(1098205-1098285)
chr5 (166-246)||(13548243-13548323)
chr5 (166-246)||(20022890-20022970)
chr5 (166-246)||(20040369-20040449)
chr5 (195-246)||(5984998-5985049)
chr5 (183-246)||(41263083-41263146)
chr5 (189-246)||(32473976-32474033)
chr5 (166-246)||(1781099-1781179)
chr5 (189-245)||(27477693-27477749)
chr5 (183-246)||(2551581-2551644)
chr5 (183-246)||(30211695-30211758)
chr5 (183-246)||(40797026-40797089)
chr5 (164-246)||(8627163-8627245)
chr5 (191-245)||(35641824-35641878)
chr5 (181-222)||(25773384-25773425)
chr5 (205-246)||(28142997-28143038)
chr5 (205-246)||(39104233-39104274)
chr5 (205-246)||(40316887-40316928)
chr5 (205-246)||(41410613-41410654)
chr5 (166-246)||(14607511-14607591)
chr5 (166-246)||(31191131-31191211)
[»] chr7 (33 HSPs)
chr7 (132-236)||(7314309-7314414)
chr7 (137-246)||(23734169-23734280)
chr7 (163-246)||(7461010-7461093)
chr7 (183-246)||(40348558-40348621)
chr7 (164-246)||(36404880-36404962)
chr7 (165-246)||(31496599-31496680)
chr7 (137-241)||(42493517-42493622)
chr7 (166-246)||(16807100-16807180)
chr7 (198-246)||(26190319-26190367)
chr7 (166-246)||(38069081-38069161)
chr7 (166-246)||(40231958-40232038)
chr7 (183-246)||(9173290-9173353)
chr7 (165-246)||(28016144-28016225)
chr7 (165-246)||(47713386-47713467)
chr7 (190-246)||(5887894-5887950)
chr7 (183-246)||(33376822-33376885)
chr7 (183-246)||(38850749-38850812)
chr7 (153-219)||(44389302-44389369)
chr7 (137-246)||(25273971-25274081)
chr7 (180-246)||(27248799-27248865)
chr7 (137-246)||(30462175-30462285)
chr7 (181-246)||(3680393-3680458)
chr7 (197-246)||(5842178-5842227)
chr7 (197-246)||(9821237-9821286)
chr7 (197-246)||(10723162-10723211)
chr7 (180-245)||(23348400-23348465)
chr7 (205-246)||(26651163-26651204)
chr7 (201-246)||(32222615-32222660)
chr7 (205-246)||(35265775-35265816)
chr7 (205-246)||(38198632-38198673)
chr7 (205-246)||(38353552-38353593)
chr7 (180-233)||(39982161-39982214)
chr7 (166-246)||(35693784-35693864)
[»] chr4 (35 HSPs)
chr4 (137-246)||(36662652-36662760)
chr4 (137-246)||(3708253-3708363)
chr4 (133-246)||(53987733-53987847)
chr4 (130-246)||(33394070-33394187)
chr4 (166-246)||(8525369-8525449)
chr4 (135-246)||(31152659-31152771)
chr4 (182-246)||(38715607-38715670)
chr4 (136-246)||(29844277-29844388)
chr4 (135-245)||(42185272-42185383)
chr4 (148-246)||(50684931-50685030)
chr4 (137-246)||(18881310-18881420)
chr4 (165-246)||(37164045-37164126)
chr4 (166-246)||(39170988-39171068)
chr4 (166-246)||(43447195-43447275)
chr4 (165-236)||(48336393-48336462)
chr4 (137-236)||(48336642-48336742)
chr4 (166-246)||(55631828-55631908)
chr4 (183-246)||(28914415-28914478)
chr4 (181-236)||(35755228-35755283)
chr4 (186-246)||(43047437-43047497)
chr4 (183-246)||(1613171-1613234)
chr4 (183-246)||(4271967-4272030)
chr4 (180-243)||(27976614-27976677)
chr4 (183-246)||(39195537-39195600)
chr4 (183-246)||(39260399-39260462)
chr4 (183-246)||(46608260-46608323)
chr4 (183-246)||(47834097-47834160)
chr4 (164-246)||(23605855-23605937)
chr4 (133-246)||(31657309-31657423)
chr4 (153-246)||(51736970-51737064)
chr4 (181-234)||(10181150-10181203)
chr4 (189-222)||(42154870-42154903)
chr4 (183-236)||(48380520-48380573)
chr4 (166-246)||(10384878-10384958)
chr4 (164-220)||(39194089-39194145)
[»] chr2 (33 HSPs)
chr2 (163-246)||(15771035-15771118)
chr2 (180-246)||(18733969-18734035)
chr2 (166-246)||(5096278-5096358)
chr2 (183-246)||(10333531-10333594)
chr2 (136-246)||(25762193-25762304)
chr2 (166-246)||(7724564-7724644)
chr2 (166-246)||(8373464-8373544)
chr2 (166-246)||(12209019-12209099)
chr2 (166-246)||(38963825-38963905)
chr2 (166-246)||(40471766-40471846)
chr2 (181-236)||(3037874-3037929)
chr2 (191-246)||(5030339-5030394)
chr2 (183-246)||(16127733-16127796)
chr2 (191-246)||(25277886-25277941)
chr2 (183-246)||(41436879-41436942)
chr2 (197-246)||(4137470-4137519)
chr2 (165-246)||(8896300-8896381)
chr2 (189-246)||(11383998-11384055)
chr2 (165-246)||(16126035-16126116)
chr2 (154-246)||(18504489-18504582)
chr2 (180-236)||(33046199-33046255)
chr2 (167-246)||(5861518-5861597)
chr2 (195-246)||(7601350-7601401)
chr2 (183-246)||(37806829-37806892)
chr2 (166-244)||(6075155-6075233)
chr2 (164-246)||(22718496-22718578)
chr2 (35-93)||(27909539-27909597)
chr2 (164-246)||(41575590-41575672)
chr2 (164-246)||(43925102-43925184)
chr2 (165-246)||(16333509-16333590)
chr2 (197-246)||(37987889-37987938)
chr2 (205-246)||(45036432-45036473)
chr2 (166-246)||(31603369-31603449)
[»] chr8 (46 HSPs)
chr8 (137-246)||(13888581-13888691)
chr8 (181-246)||(35584125-35584190)
chr8 (183-247)||(36632143-36632207)
chr8 (183-246)||(7603354-7603417)
chr8 (183-246)||(25118833-25118896)
chr8 (183-246)||(29917879-29917942)
chr8 (183-246)||(38842210-38842273)
chr8 (165-236)||(40645638-40645709)
chr8 (137-246)||(9615523-9615633)
chr8 (129-246)||(27301854-27301972)
chr8 (137-246)||(44887666-44887776)
chr8 (181-246)||(7431270-7431335)
chr8 (165-246)||(29616277-29616358)
chr8 (166-246)||(4327070-4327150)
chr8 (166-246)||(25691548-25691628)
chr8 (166-246)||(30464462-30464542)
chr8 (183-246)||(3466330-3466393)
chr8 (136-246)||(17523804-17523915)
chr8 (183-246)||(20671303-20671366)
chr8 (137-246)||(1156529-1156639)
chr8 (184-246)||(1645357-1645419)
chr8 (154-246)||(4960168-4960261)
chr8 (165-246)||(8496837-8496918)
chr8 (181-246)||(25256484-25256549)
chr8 (197-246)||(44039886-44039935)
chr8 (164-236)||(11988739-11988811)
chr8 (166-246)||(14378637-14378717)
chr8 (166-246)||(25009174-25009254)
chr8 (154-236)||(9420714-9420797)
chr8 (141-219)||(10658155-10658234)
chr8 (183-246)||(14511887-14511950)
chr8 (153-219)||(20167593-20167660)
chr8 (183-246)||(43184730-43184793)
chr8 (188-246)||(30653412-30653470)
chr8 (164-246)||(37094160-37094242)
chr8 (205-246)||(5777505-5777546)
chr8 (189-246)||(8058975-8059032)
chr8 (197-246)||(15870236-15870285)
chr8 (205-246)||(23437764-23437805)
chr8 (181-234)||(29360899-29360952)
chr8 (197-246)||(42150101-42150150)
chr8 (205-245)||(9459244-9459284)
chr8 (153-246)||(11756792-11756888)
chr8 (143-246)||(16345184-16345287)
chr8 (184-236)||(20671204-20671256)
chr8 (166-246)||(21132879-21132959)
[»] chr3 (54 HSPs)
chr3 (137-246)||(23631541-23631651)
chr3 (164-246)||(53274944-53275026)
chr3 (131-246)||(901037-901153)
chr3 (137-236)||(28229005-28229104)
chr3 (166-246)||(34669638-34669718)
chr3 (137-246)||(37166481-37166592)
chr3 (137-246)||(4229137-4229247)
chr3 (137-246)||(29720395-29720505)
chr3 (133-246)||(29793327-29793441)
chr3 (148-245)||(50888356-50888454)
chr3 (134-246)||(9484593-9484706)
chr3 (181-246)||(21271897-21271962)
chr3 (166-246)||(12948070-12948150)
chr3 (166-246)||(16434806-16434886)
chr3 (166-246)||(29455657-29455737)
chr3 (183-247)||(32961293-32961357)
chr3 (194-246)||(38878427-38878479)
chr3 (166-246)||(42098576-42098656)
chr3 (137-236)||(47069406-47069506)
chr3 (166-246)||(49076375-49076455)
chr3 (190-246)||(54684617-54684673)
chr3 (148-246)||(10819392-10819491)
chr3 (183-246)||(34263653-34263716)
chr3 (183-246)||(34555198-34555261)
chr3 (183-246)||(36364712-36364775)
chr3 (133-246)||(2643218-2643332)
chr3 (137-246)||(4945800-4945910)
chr3 (153-246)||(28958948-28959042)
chr3 (137-246)||(48927751-48927861)
chr3 (153-246)||(52094043-52094137)
chr3 (197-246)||(18013419-18013468)
chr3 (134-246)||(29809342-29809455)
chr3 (136-236)||(35717854-35717955)
chr3 (197-246)||(36179085-36179134)
chr3 (197-246)||(47340033-47340082)
chr3 (138-246)||(53055574-53055683)
chr3 (181-245)||(935076-935140)
chr3 (183-246)||(36594367-36594431)
chr3 (164-236)||(43370319-43370391)
chr3 (166-246)||(46866373-46866453)
chr3 (166-246)||(50673707-50673787)
chr3 (181-236)||(21489963-21490018)
chr3 (183-246)||(26759526-26759589)
chr3 (180-219)||(45093897-45093936)
chr3 (186-244)||(1325498-1325556)
chr3 (133-246)||(1778357-1778471)
chr3 (137-246)||(4464881-4464991)
chr3 (188-246)||(43394507-43394565)
chr3 (137-236)||(5029988-5030089)
chr3 (183-236)||(38833924-38833977)
chr3 (181-246)||(42247157-42247222)
chr3 (181-246)||(48143914-48143979)
chr3 (205-246)||(48690204-48690245)
chr3 (153-236)||(15503184-15503268)
[»] chr1 (39 HSPs)
chr1 (134-246)||(8048706-8048819)
chr1 (153-246)||(48312045-48312138)
chr1 (181-245)||(2612034-2612098)
chr1 (143-246)||(27462746-27462848)
chr1 (136-232)||(38737377-38737474)
chr1 (181-246)||(48896964-48897029)
chr1 (166-246)||(10100471-10100551)
chr1 (186-246)||(52749331-52749391)
chr1 (187-246)||(2138987-2139046)
chr1 (183-246)||(23337854-23337917)
chr1 (183-246)||(43453123-43453186)
chr1 (183-246)||(44741390-44741453)
chr1 (183-246)||(49903643-49903706)
chr1 (137-246)||(31932136-31932246)
chr1 (181-246)||(51924928-51924994)
chr1 (134-246)||(1821586-1821699)
chr1 (154-234)||(27581039-27581120)
chr1 (189-246)||(31971440-31971497)
chr1 (165-246)||(38786904-38786985)
chr1 (166-246)||(6017407-6017487)
chr1 (166-246)||(10124139-10124219)
chr1 (166-246)||(26543898-26543978)
chr1 (166-246)||(32968143-32968223)
chr1 (197-245)||(36035747-36035795)
chr1 (137-244)||(41414203-41414311)
chr1 (166-246)||(45299348-45299428)
chr1 (194-246)||(47912339-47912391)
chr1 (153-246)||(52688546-52688641)
chr1 (183-246)||(7075288-7075351)
chr1 (183-246)||(44963630-44963693)
chr1 (181-235)||(27990760-27990814)
chr1 (188-242)||(32495199-32495253)
chr1 (164-246)||(41855679-41855761)
chr1 (164-246)||(48389094-48389176)
chr1 (205-246)||(5606349-5606390)
chr1 (205-246)||(5945834-5945875)
chr1 (205-246)||(31651859-31651900)
chr1 (189-233)||(15443412-15443456)
chr1 (155-246)||(50014519-50014611)
[»] chr6 (26 HSPs)
chr6 (135-246)||(9022838-9022950)
chr6 (137-246)||(31708893-31709003)
chr6 (166-246)||(2141598-2141678)
chr6 (166-246)||(6142465-6142545)
chr6 (166-246)||(29514984-29515064)
chr6 (183-246)||(16661560-16661623)
chr6 (133-246)||(24798504-24798618)
chr6 (135-246)||(4890084-4890196)
chr6 (189-245)||(16120833-16120889)
chr6 (166-246)||(17417672-17417752)
chr6 (166-246)||(24825195-24825275)
chr6 (166-246)||(32541435-32541515)
chr6 (183-246)||(30699308-30699371)
chr6 (137-241)||(17496281-17496386)
chr6 (193-246)||(24693195-24693248)
chr6 (166-246)||(2397800-2397880)
chr6 (166-246)||(2656628-2656708)
chr6 (166-246)||(6188614-6188694)
chr6 (183-246)||(10105858-10105921)
chr6 (137-246)||(2667283-2667393)
chr6 (191-245)||(12869373-12869427)
chr6 (205-246)||(995632-995673)
chr6 (181-222)||(3686951-3686992)
chr6 (154-246)||(17179356-17179447)
chr6 (154-246)||(32673765-32673858)
chr6 (189-245)||(2555295-2555351)
[»] scaffold0500 (1 HSPs)
scaffold0500 (165-246)||(629-710)
[»] scaffold0687 (1 HSPs)
scaffold0687 (183-246)||(1036-1099)
[»] scaffold0069 (1 HSPs)
scaffold0069 (137-247)||(4441-4552)
[»] scaffold0221 (1 HSPs)
scaffold0221 (166-246)||(5406-5486)
[»] scaffold0204 (2 HSPs)
scaffold0204 (165-236)||(23915-23984)
scaffold0204 (137-236)||(24164-24264)
[»] scaffold0001 (1 HSPs)
scaffold0001 (166-246)||(183996-184076)


Alignment Details
Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 26077791 - 26077646
Alignment:
Q  14 aggatgaaggtttcttaaaggtgccgatctagtcgggatatctaatgttctccttgatgtctttctgactcttaattcatctnnnnnnnntataagttta 113  Q
    ||||||||||||| ||||||||| |||  ||||||| || |||||  ||||||||||||||||||||||| |||||||||||        | ||||||||    
T  26077791 aggatgaaggttttttaaaggtgtcgacttagtcggaatgtctaaaattctccttgatgtctttctgacttttaattcatctaaaaaaaatttaagttta 26077692  T
Q  114 aattatttagttattttaattattactccctccttcctacaataga 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26077691 aattatttagttattttaattattactccctccttcctacaataga 26077646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 40079979 - 40080091
Alignment:
Q  135 attactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaat 233  Q
    |||||||||||| |||||||||||||||  ||||||||||| | | || || ||||||| || ||||| | ||||||||||||||||||   ||||||||    
T  40079979 attactccctccgtcctacaatagatgacctatttgaaaatttacaattttaacctaacttactttgaccatatttttctactaatatacatagataaat 40080078  T
Q  234 aatgtcatataag 246  Q
    ||| |||||||||    
T  40080079 aatatcatataag 40080091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 14057738 - 14057818
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | || |||||||||| || ||||||| |||||||||| |||||||  |||||||||||| |||||||||    
T  14057738 tttgaaaatatgcaattttgacctaacttactttgatcatatttttctattaatatacaaagataaataatatcatataag 14057818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 19344733 - 19344653
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  19344733 tttgaaaatgtgcaattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 19344653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 30721750 - 30721639
Alignment:
Q  136 ttactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    ||||||||||| |||  ||||| ||||  ||||||||||| | | || |||||||||| |||||||| | |||||||||| |||||||  ||||||||||    
T  30721750 ttactccctccatcccgcaataaatgacatatttgaaaatgtgcaattttgacctaacttattttgaccatatttttctattaatatacaaagataaata 30721651  T
Q  235 atgtcatataag 246  Q
    || |||||||||    
T  30721650 atatcatataag 30721639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 33402608 - 33402545
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  33402608 ttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 33402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 9936956 - 9936842
Alignment:
Q  133 ttattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataa 231  Q
    |||||||||||||| |||  ||||| ||||| ||||| ||||| | | || |||| ||||  |||||||| | ||||||||||||||||||  |||||||    
T  9936956 ttattactccctccgtcccgcaataaatgatatatttaaaaatgtgcaattttgatctaatttattttgaccatatttttctactaatatacaaagataa 9936857  T
Q  232 ataatgtcatataag 246  Q
    ||||| |||||||||    
T  9936856 ataatatcatataag 9936842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 14633007 - 14633117
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||| ||||| ||||| | ||||||||| | | || |||||||||| || ||||| | ||||||||||| ||||||  |||||||||||    
T  14633007 tactccctccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctacaaatatacaaagataaataa 14633106  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  14633107 tatcatataag 14633117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 27675540 - 27675650
Alignment:
Q  137 tactccctccttcctacaatagatga-ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||| |||| |||||||||||| | | || |||||||| | || ||||||| ||||||||||||||||||   ||||||||||    
T  27675540 tactccctccgtcccgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatttttctactaatatacatagataaataa 27675639  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  27675640 tatcatataag 27675650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 1098205 - 1098285
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  1098205 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 1098285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 13548243 - 13548323
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  13548243 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 13548323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 20022890 - 20022970
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  20022890 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 20022970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 20040449 - 20040369
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  20040449 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 20040369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 5984998 - 5985049
Alignment:
Q  195 attttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||||||||||||  |||||||||||| |||||||||    
T  5984998 attttgaccgtatttttctactaatatacaaagataaataatatcatataag 5985049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 41263146 - 41263083
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  41263146 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 41263083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 32474033 - 32473976
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  32474033 taacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 32473976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 1781179 - 1781099
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||  || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  1781179 tttgaaaatgtgcaattttgacctaagttactttgaccatatttttctactaatatacaaagataaataatatcatataag 1781099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 27477749 - 27477693
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    ||||||| ||||| ||||||||| ||||||||||  |||||||||||| ||||||||    
T  27477749 taacatactttgaccgtatttttttactaatatacaaagataaataatatcatataa 27477693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 2551644 - 2551581
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| |||||| | | ||||||||||||||||||  |||||||||||| | |||||||    
T  2551644 ttgacctaacttattttaaccatatttttctactaatatataaagataaataatattatataag 2551581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 30211758 - 30211695
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| ||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  30211758 ttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 30211695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 40797089 - 40797026
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||  | |||||||||||||||| |||||||||  |||||||||||  |||||||||    
T  40797089 ttgacctaactaactttgatcgtatttttcaactaatatacaaagataaataacatcatataag 40797026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 8627163 - 8627245
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||| ||||| || ||||| | ||||||| ||||||||||  |||||||||||||| |||||||    
T  8627163 tatttgaaaatgtgcaattttgatctaacttactttgaccatatttttttactaatatacaaagataaataatgttatataag 8627245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 35641824 - 35641878
Alignment:
Q  191 acatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    ||||| ||||| | ||||||||||||||||||  |||||||||||| ||||||||    
T  35641824 acatactttgaccatatttttctactaatatataaagataaataatatcatataa 35641878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 25773425 - 25773384
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatata 222  Q
    ||||||||||||||| ||||| | ||||||||||||||||||    
T  25773425 tattgacctaacatactttgaccatatttttctactaatata 25773384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 28142997 - 28143038
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  28142997 tatttttctactaatatacaaagataaataatatcatataag 28143038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 39104274 - 39104233
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  39104274 tatttttctactaatatacaaagataaataatatcatataag 39104233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 40316887 - 40316928
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  40316887 tatttttctactaatatacaaagataaataatatcatataag 40316928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 41410654 - 41410613
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  41410654 tatttttctactaatatacaaagataaataatatcatataag 41410613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 14607591 - 14607511
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||  || ||||| | ||||||||||||||||||  ||||||| |||| |||||||||    
T  14607591 tttgaaaatgtgcaattttgacctaatttaatttgaccatatttttctactaatatacaaagataagtaatatcatataag 14607511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 31191211 - 31191131
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||  || ||||| | |||||||||| |||||||  |||||||||||| |||||||||    
T  31191211 tttgaaaatgtgcaattttgacctaatttactttgaccatatttttctattaatatacaaagataaataatatcatataag 31191131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 7314414 - 7314309
Alignment:
Q  132 attattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagata 230  Q
    |||| |||||||||| |||||||||||||||| ||||||| ||| | |  ||||||||||||||| ||||| | ||||||||||||||||||  ||||||    
T  7314414 attagtactccctccgtcctacaatagatgatctatttgagaatttgcactattgacctaacatactttgaccatatttttctactaatatacaaagata 7314315  T
Q  231 aataat 236  Q
    ||||||    
T  7314314 aataat 7314309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 23734169 - 23734280
Alignment:
Q  137 tactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaa-catattttgatcgtatttttctactaatataagaagataaata 234  Q
    |||||| ||| | ||| ||||||||||| |||||||||||| |  ||||||| ||| ||||||||||   |||||||||||||||||| |||||||||||    
T  23734169 tactccttccgttctataatagatgatttatttgaaaatatgcactattgacttaaacatattttgactatatttttctactaatatacgaagataaata 23734268  T
Q  235 atgtcatataag 246  Q
    || |||||||||    
T  23734269 atatcatataag 23734280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 7461093 - 7461010
Alignment:
Q  163 ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||  ||||||  ||| |||||||||  ||||||||  |||||||||| |||||||||||| |||||||||    
T  7461093 ttatttgaaaatattcattattgatataatatattttgactgtattttttcactaatataaaaagataaataatatcatataag 7461010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 40348621 - 40348558
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  40348621 ttgacctgacatattttgaccatatttttctactaatatacaaagataaataatatcatataag 40348558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 36404962 - 36404880
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||| ||||| ||||||||| |||||||||||||||||||  |||||||||||| | |||||||    
T  36404962 tatttgaaaatgtgcaattttgatctaacgtattttgattgtatttttctactaatatagaaagataaataatattatataag 36404880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 31496680 - 31496599
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | | || |||||||||| || ||||| |||||||||||| |||||||  |||||||||||| |||||||||    
T  31496680 atttgaaaatgtacaattttgacctaacttactttgaccgtatttttctattaatatacaaagataaataatatcatataag 31496599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 42493517 - 42493622
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| ||| |||||||||||  ||||||| ||| | |   |||||||||||||| ||||| | ||||||||||||||||||  |||||||||||    
T  42493517 tactccctccgtcccacaatagatgacctatttgacaatgtgcgcgattgacctaacatactttgaccatatttttctactaatatacaaagataaataa 42493616  T
Q  236 tgtcat 241  Q
    | ||||    
T  42493617 tatcat 42493622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 16807180 - 16807100
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  16807180 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 16807100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 26190367 - 26190319
Alignment:
Q  198 ttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||    
T  26190367 ttgatcgtatttttctactaatatacaaagataaataatttcatataag 26190319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 38069081 - 38069161
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  38069081 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 38069161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 40231958 - 40232038
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||  |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  40231958 tttgaaaatgtgcaattttgacctaatttattttgaccatatttttctactaatatataaagataaataatatcatataag 40232038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 9173353 - 9173290
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  9173353 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 9173290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 28016144 - 28016225
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | | || |||| ||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  28016144 atttgaaaatgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 28016225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 47713467 - 47713386
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | | || |||||||||| || ||||| ||||||||| | ||||||||  |||||||||||| |||||||||    
T  47713467 atttgaaaatgtgcaattttgacctaacttactttgaccgtatttttttgctaatatacaaagataaataatatcatataag 47713386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 5887894 - 5887950
Alignment:
Q  190 aacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||||| ||||||||||||||||||  |||| |||| || |||||||||    
T  5887894 aacatattttgatcatatttttctactaatatacaaagacaaatgatatcatataag 5887950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 33376822 - 33376885
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| |||||||||||| |||||||  |||| ||||||| |||||||||    
T  33376822 ttgacctaacttactttgaccgtatttttctattaatatacaaagaaaaataatatcatataag 33376885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 38850749 - 38850812
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | |||||||| |||||||||  |||||||||||| |||||||||    
T  38850749 ttgacctaacttactttgaccatatttttccactaatatacaaagataaataatatcatataag 38850812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 44389302 - 44389369
Alignment:
Q  153 caatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaat 219  Q
    ||||||||||| ||||||| ||||| |  ||||||| ||||||||||||||  |||||||||||||||    
T  44389302 caatagatgatctatttgacaatatacactattgacttaacatattttgataatatttttctactaat 44389369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 25274081 - 25273971
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||| ||| |||| ||||| ||||| | ||||||||| | | || |||||||||| || ||||| | || |||||||||||||||  |||||||||||    
T  25274081 tactccatccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccataattttctactaatatacaaagataaataa 25273982  T
Q  236 tgtcatataag 246  Q
    | | |||||||    
T  25273981 tattatataag 25273971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 27248865 - 27248799
Alignment:
Q  180 atattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| |||||||| |||||||  |||||||||||||||||  || |||| |||| |||||||||    
T  27248865 atattgaactaacatactttgatcagatttttctactaatatacaaaaataattaatatcatataag 27248799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 30462285 - 30462175
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||| ||||| | ||||||||| | | || ||||| |||| || ||||| | ||||||| ||||||||||  |||||||||||    
T  30462285 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacttaacttactttgaccatatttttttactaatatacaaagataaataa 30462186  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  30462185 tatcatataag 30462175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 3680393 - 3680458
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| | ||||||||||| | ||||||| ||||||||||  || ||||||||| |||||||||    
T  3680393 tattgacttgacatattttgaccttatttttatactaatatacaaatataaataatatcatataag 3680458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 5842178 - 5842227
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||| ||||||||||  |||||||||||| |||||||||    
T  5842178 tttgatcatatttttatactaatatataaagataaataatatcatataag 5842227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 9821286 - 9821237
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||| ||||||||||  |||||||||||| |||||||||    
T  9821286 tttgatcatatttttttactaatatataaagataaataatatcatataag 9821237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 10723211 - 10723162
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||| ||||||||||  |||||||||||| |||||||||    
T  10723211 tttgatcatatttttttactaatatataaagataaataatatcatataag 10723162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 23348400 - 23348465
Alignment:
Q  180 atattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    ||||||| |||||||| ||||| | ||||||| ||||||||||  |||||||||||  ||||||||    
T  23348400 atattgaactaacatactttgaccatatttttttactaatatacaaagataaataacatcatataa 23348465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 26651204 - 26651163
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  26651204 tatttttctactaatatacaaagataaataatatcatataag 26651163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 32222615 - 32222660
Alignment:
Q  201 atcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||||| |||||||  |||||||||||| |||||||||    
T  32222615 atcgtatttttctattaatatacaaagataaataatatcatataag 32222660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 35265816 - 35265775
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  35265816 tatttttctactaatatacaaagataaataatatcatataag 35265775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 38198673 - 38198632
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  38198673 tatttttctactaatatacaaagataaataatatcatataag 38198632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 38353593 - 38353552
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  38353593 tatttttctactaatatacaaagataaataatatcatataag 38353552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 39982161 - 39982214
Alignment:
Q  180 atattgacctaacatattttgatcgtatttttctactaatataagaagataaat 233  Q
    ||||||||||| ||||||||||  | |||||||||||||||||  |||||||||    
T  39982161 atattgacctagcatattttgactgcatttttctactaatatacaaagataaat 39982214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 35693864 - 35693784
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || || || | ||||||||||||||||||  || ||||||||| |||||||||    
T  35693864 tttgaaaatgtgcaattttgacctaacttacttcgaccatatttttctactaatatacaaaaataaataatatcatataag 35693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 36662760 - 36662652
Alignment:
Q  137 tactccctccttcctacaatagatga-ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    ||||| |||| ||||||||||||||| |||||||||||||| |  |||||| |||||||||||  | | ||||||||||||||||||  |||||||||||    
T  36662760 tactctctccgtcctacaatagatgacttatttgaaaatatgcactattgatctaacatattt--accttatttttctactaatatataaagataaataa 36662663  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  36662662 tatcatataag 36662652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 3708253 - 3708363
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| ||| |||||| ||||| | ||||||||| | | || |||||||||| || ||||||| ||||||||||||||||||  |||||||||||    
T  3708253 tactccctccgtcccacaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataa 3708352  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  3708353 tatcatataag 3708363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 53987847 - 53987733
Alignment:
Q  133 ttattactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataa 231  Q
    |||||||| ||||  ||||||||||||||||  |||| ||||| | | ||||| ||||||| || ||||| | ||||||||||||||||||  |||||||    
T  53987847 ttattacttcctctgtcctacaatagatgatccatttaaaaatgtgcaatattaacctaacttactttgaccatatttttctactaatatacaaagataa 53987748  T
Q  232 ataatgtcatataag 246  Q
    ||||| |||||||||    
T  53987747 ataatatcatataag 53987733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 33394070 - 33394187
Alignment:
Q  130 taattattactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaaga 228  Q
    ||||||||||| ||||| ||| ||||||| |||   |||| ||||| | | || |||||||||| || ||||| | |||||||||||||||||| |||||    
T  33394070 taattattacttcctccgtcccacaataggtgacccatttaaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacgaaga 33394169  T
Q  229 taaataatgtcatataag 246  Q
    |||||||| |||||||||    
T  33394170 taaataatctcatataag 33394187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 8525449 - 8525369
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | || |||||||||| || ||||||| ||||||||||||||||||  | |||||||||| |||||||||    
T  8525449 tttgaaaatatgcaattttgacctaacttactttgatcatatttttctactaatatacaaggataaataatatcatataag 8525369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 31152659 - 31152771
Alignment:
Q  135 attactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaat 233  Q
    |||||||||||| ||| |||||| ||||  | ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||    
T  31152659 attactccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 31152758  T
Q  234 aatgtcatataag 246  Q
    ||| |||||||||    
T  31152759 aatatcatataag 31152771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 38715607 - 38715670
Alignment:
Q  182 attgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| |||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||    
T  38715607 attgatctaacatattttgaccgtatttttctactaatat-acaagataaataatatcatataag 38715670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 29844388 - 29844277
Alignment:
Q  136 ttactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    ||||||||||| || ||||||||||||| ||||| ||||||| |  |||||| |||| ||| ||| | |||||||||||| |||||||  ||||||||||    
T  29844388 ttactccctccgtcttacaatagatgatctatttcaaaatatgcattattgatctaagatactttaaccgtatttttctattaatatataaagataaata 29844289  T
Q  235 atgtcatataag 246  Q
    || | |||||||    
T  29844288 atattatataag 29844277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 42185272 - 42185383
Alignment:
Q  135 attactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaat 233  Q
    |||||||||||| |||  |||||||||||  |||||||||| | | || |||||||||  || ||||| | ||||||||||||||||||  |||||||||    
T  42185272 attactccctccgtcccgcaatagatgatccatttgaaaatttgcaattttgacctaatttagtttgaccatatttttctactaatatacaaagataaat 42185371  T
Q  234 aatgtcatataa 245  Q
    ||| ||||||||    
T  42185372 aatatcatataa 42185383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 50684931 - 50685030
Alignment:
Q  148 tcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| |||||||| || ||||| ||||||| | || |||| ||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  50684931 tcctccaatagataatctatttaaaaatatgcaattttgatctaacttactttgatcatatttttctactaatatataaagataaataatatcatataag 50685030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 18881420 - 18881310
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||||||||||||||  ||||||||||| |    ||||||| ||| ||| |||||   ||||||||||||||||||  |||||||||||    
T  18881420 tactccctccgtcctacaatagatgacctatttgaaaatgtgaactattgacttaatatactttgactatatttttctactaatatacaaagataaataa 18881321  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  18881320 tatcatataag 18881310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 37164045 - 37164126
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||| | || |||||||||| || |||||   ||||||||||||||||||  |||||||||||| |||||||||    
T  37164045 atttgaaaatatacaattttgacctaacttactttgactatatttttctactaatatacaaagataaataatatcatataag 37164126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 39170988 - 39171068
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| |||||||| | ||||||||||||||||||  |||||||||||| | |||||||    
T  39170988 tttgaaaatgtgcaattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatataatataag 39171068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 43447195 - 43447275
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  43447195 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 43447275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 48336462 - 48336393
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||||||| | | || |||||||||| || ||||||||||||||||||||||||||  ||||||||||||    
T  48336462 atttgaaaatgtgcaattttgacctaacttactttgatcgtatttttctactaatata--aagataaataat 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 48336742 - 48336642
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| || || |||||||||  ||||| ||||| | |  ||||||| ||||||||||||| ||||||||||||||||||||  |||||| ||||    
T  48336742 tactccctccgtcttataatagatgacctatttaaaaatgtgcactattgacttaacatattttgaccgtatttttctactaatatacaaagatagataa 48336643  T
Q  236 t 236  Q
    |    
T  48336642 t 48336642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 55631908 - 55631828
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| |||||||| | ||||||| ||||||||||  |||||||||||| |||||||||    
T  55631908 tttgaaaatgtgcaattttgacctaacttattttgaccatatttttttactaatatacaaagataaataatatcatataag 55631828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 28914415 - 28914478
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  28914415 ttgacctaacttactttgaccatatttttctactaatatataaagataaataatatcatataag 28914478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 35755228 - 35755283
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||||||    
T  35755228 tattgacctgacatattttgatcatatttttatactaatatataaagataaataat 35755283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 43047437 - 43047497
Alignment:
Q  186 acctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  43047437 acctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 43047497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 1613234 - 1613171
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||  || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  1613234 ttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataag 1613171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 4272030 - 4271967
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || |||||  ||||||||||| |||||||  |||||||||||| |||||||||    
T  4272030 ttgacctaacttactttgactgtatttttctattaatatataaagataaataatatcatataag 4271967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 27976614 - 27976677
Alignment:
Q  180 atattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatat 243  Q
    ||||||| |||| ||||||||||| ||||||| || |||||||  |||||||||||| ||||||    
T  27976614 atattgatctaatatattttgatcatatttttttattaatatacaaagataaataatatcatat 27976677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 39195537 - 39195600
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||| ||||| | ||||||| ||||||||||  |||||||||||| |||||||||    
T  39195537 ttgacctgacatactttgaccatatttttatactaatatacaaagataaataatatcatataag 39195600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 39260399 - 39260462
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||  ||||||||   ||||||||||||||||||  |||||||||||| |||||||||    
T  39260399 ttgacctaatttattttgacaatatttttctactaatatacaaagataaataatatcatataag 39260462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 46608260 - 46608323
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||| ||||||||||  |||||||||||| |||||||||    
T  46608260 ttgacctaacttactttgaccatatttttatactaatatacaaagataaataatatcatataag 46608323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 47834160 - 47834097
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| |||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  47834160 ttgacataacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 47834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 23605937 - 23605855
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||||||| | || ||||||| |||||||||||||| |||   ||||||||||| |||||||||    
T  23605937 tatttgaaaatttacaattttgacctagcttactttgatcatatttttctactaacatacatagataaataatatcatataag 23605855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 31657423 - 31657309
Alignment:
Q  133 ttattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataa 231  Q
    |||||||||||||| |||  ||||| ||||  ||||| ||||| | | || |||||||| | || ||||| | ||||||||||||||||||   ||||||    
T  31657423 ttattactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataa 31657324  T
Q  232 ataatgtcatataag 246  Q
    ||||| |||||||||    
T  31657323 ataatatcatataag 31657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 51736970 - 51737064
Alignment:
Q  153 caatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| ||||||| ||||| |  ||||||| ||| ||||||||| | |||||||||||||||  |  |||||||||||| |||| ||||    
T  51736970 caatagatgatctatttgacaatatacattattgacttaatatattttgaccatatttttctactaattcacaaagataaataatatcatgtaag 51737064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 10181203 - 10181150
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    ||||||| ||||||||||||| |  |||||||||||||||||  ||||||||||    
T  10181203 tattgacttaacatattttgaccacatttttctactaatatacaaagataaata 10181150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 42154870 - 42154903
Alignment:
Q  189 taacatattttgatcgtatttttctactaatata 222  Q
    ||||||||||||||| ||||||||||||||||||    
T  42154870 taacatattttgatcatatttttctactaatata 42154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 48380520 - 48380573
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||||||| || ||||| | ||||||||||||||||||  ||||||||||||    
T  48380520 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 48380573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 10384878 - 10384958
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||| | | ||||||||||||||||||  ||||||||||||  ||||||||    
T  10384878 tttgaaaatgtgcaattttgacctaacttactttaaccatatttttctactaatatacaaagataaataataacatataag 10384958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 39194145 - 39194089
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaata 220  Q
    ||||||| ||||| | |||||||| ||||||| |||||  |||||||||||||||||    
T  39194145 tatttgacaatatacaatattgacttaacatactttgactgtatttttctactaata 39194089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 15771118 - 15771035
Alignment:
Q  163 ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||| | |  |||||| ||||||||||||||||||||||||||| |||||||  |||||||||||| |||||||||    
T  15771118 ttatttgaaaatgtgcactattgatctaacatattttgatcgtatttttctattaatatataaagataaataatatcatataag 15771035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 18733969 - 18734035
Alignment:
Q  180 atattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||    
T  18733969 atattgacttaacatattttgattgtatttttctactaatatacgaagataaaaaatttcatgtaag 18734035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 5096278 - 5096358
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || ||||| |||| |||||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  5096278 tttgaaaatgtacaattttgacataacttattttgatcatatttttctactaatatataaagataaataatatcatataag 5096358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 10333594 - 10333531
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  10333594 ttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 10333531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 25762193 - 25762304
Alignment:
Q  136 ttactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    ||||||||||| ||||| |||||||||| | ||||||||| | |  ||||||||||| ||| || || | |||||||||| |||||||  ||||||||||    
T  25762193 ttactccctccgtcctataatagatgatctgtttgaaaatgtgcactattgacctaatatacttcgaccctatttttctattaatatacaaagataaata 25762292  T
Q  235 atgtcatataag 246  Q
    || |||||||||    
T  25762293 atatcatataag 25762304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 7724644 - 7724564
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  7724644 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 7724564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 8373464 - 8373544
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  8373464 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 8373544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 12209019 - 12209099
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  12209019 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 12209099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 38963825 - 38963905
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  38963825 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 38963905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 40471766 - 40471846
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || ||||| |||| |||||||||| ||||||| ||||||||||  |||||||||||| |||||||||    
T  40471766 tttgaaaatgtgcaattttgacttaacttattttgatcatatttttttactaatatacaaagataaataatatcatataag 40471846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 3037929 - 3037874
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||||||||||||||||||||  |||||| ||||||||||  ||||||||||||    
T  3037929 tattgacctaacatattttgatcacatttttttactaatatacaaagataaataat 3037874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 5030339 - 5030394
Alignment:
Q  191 acatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| ||||||||||||||| ||||||||||  |||||||||||| |||||||||    
T  5030339 acatactttgatcgtatttttatactaatatacaaagataaataatatcatataag 5030394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 16127796 - 16127733
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||||| |||||||| |||||||||  |||||||||||| |||||||||    
T  16127796 ttgacctaacttactttgatcatatttttccactaatatacaaagataaataatatcatataag 16127733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 25277941 - 25277886
Alignment:
Q  191 acatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| |||||||||||||||| ||||||||||  |||||||||||| |||||||||    
T  25277941 acatgttttgatcgtatttttatactaatatacaaagataaataatatcatataag 25277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 41436879 - 41436942
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  41436879 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 41436942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 4137470 - 4137519
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  4137470 tttgatcatatttttctactaatatacaaagataaataatatcatataag 4137519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 8896300 - 8896381
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| ||| |||||    
T  8896300 atttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcacataag 8896381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 11384055 - 11383998
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| |||||||||| ||||||||||||||||||  |||||||||||| |||| ||||    
T  11384055 taacttattttgatcatatttttctactaatatataaagataaataatatcatgtaag 11383998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 16126116 - 16126035
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | | || |||||||||| || ||||| | |||||||| |||||||||  |||||||||||| |||||||||    
T  16126116 atttgaaaatgtgcaattttgacctaacttactttgaccatatttttccactaatatacaaagataaataatatcatataag 16126035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 18504489 - 18504582
Alignment:
Q  154 aatagatga-ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| |||||||||||| |   || ||||| |||| |||||||| | ||||||||||||||||||  ||||| |||||| |||||||||    
T  18504489 aatagatgacttatttgaaaatgtgtaattttgacgtaacttattttgaccatatttttctactaatatacaaagatcaataatatcatataag 18504582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 33046255 - 33046199
Alignment:
Q  180 atattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    ||||| ||||| |||||||||||  ||||||||||||||||||  ||||||||||||    
T  33046255 atattaacctagcatattttgattatatttttctactaatatacaaagataaataat 33046199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 5861597 - 5861518
Alignment:
Q  167 ttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| |  ||||||||||||||  ||||| |||||||||| |||||||||   | ||||||||| |||||||||    
T  5861597 ttgaaaatatgcactattgacctaacatgctttgaccgtatttttccactaatatacacaaataaataatatcatataag 5861518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 7601401 - 7601350
Alignment:
Q  195 attttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||||||||| |||||||||  |||||||||||  |||||||||    
T  7601401 attttgatcgtatttttcaactaatatacaaagataaataacatcatataag 7601350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 37806829 - 37806892
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||| | | ||||||||||||||||||  |||||||||||| | |||||||    
T  37806829 ttgacctgacatattttaaccatatttttctactaatatacaaagataaataatattatataag 37806892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 6075155 - 6075233
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatata 244  Q
    ||||||||| ||| || ||||  |||| || ||||| | |||||||||| |||||||  ||||||||||||||||||||    
T  6075155 tttgaaaattttcaattttgatttaacttactttgaccatatttttctattaatatacaaagataaataatgtcatata 6075233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 22718578 - 22718496
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||||||| | || ||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  22718578 tatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatatatagataaataatatcatataag 22718496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 27909539 - 27909597
Alignment:
Q  35 tgccgatctagtcgggatatctaatgttctccttgatgtctttctgactcttaattcat 93  Q
    |||||| ||||||||||| |||||  |||||||||||||||||||  |||||| |||||    
T  27909539 tgccgacctagtcgggatgtctaagcttctccttgatgtctttctccctcttagttcat 27909597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 41575590 - 41575672
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||||||| | || ||||||| ||||||||||||||||||   | ||||||||| |||||||||    
T  41575590 tatttgaaaatttgcaattttgacctagcttactttgatcatatttttctactaatatacatatataaataatatcatataag 41575672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 43925102 - 43925184
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||| |  ||||||| ||||||| ||||||| |||||||||||||||  |  |||||||||||| |||| ||||    
T  43925102 tatttgataatatacattattgacttaacatactttgatcatatttttctactaattcacaaagataaataatatcatgtaag 43925184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 16333509 - 16333590
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | | || |||||||||| || ||||| | |||||||| ||| |||||  |||||||||||| |||||||||    
T  16333509 atttgaaaatgtgcaattttgacctaacttactttgaccatatttttccactgatatacaaagataaataatatcatataag 16333590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 37987938 - 37987889
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||| ||||||||||  |||||||||||| |||||||||    
T  37987938 tttgatcatatttttttactaatatacaaagataaataatatcatataag 37987889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 45036432 - 45036473
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  45036432 tatttttctactaatatacaaagataaataatatcatataag 45036473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 31603449 - 31603369
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || |||||   ||||||||||||||||||  || ||||||||| |||||||||    
T  31603449 tttgaaaatgtgcaattttgacctaacttactttgacaatatttttctactaatatacaaatataaataatatcatataag 31603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 13888691 - 13888581
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| ||||||||||||| |  ||||||||||| | |  ||||||  ||||||| ||||| ||||||||||||||||||||  |||||||||||    
T  13888691 tactccctccgtcctacaatagataacctatttgaaaatgtgcgctattgatttaacatactttgaccgtatttttctactaatatacaaagataaataa 13888592  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  13888591 tatcatataag 13888581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 35584190 - 35584125
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| ||||||||||| |||||||||| |||||||  |||||||||||| |||||||||    
T  35584190 tattgacctaatatattttgatcatatttttctattaatatacaaagataaataatatcatataag 35584125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 36632207 - 36632143
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataagt 247  Q
    |||| ||||| |||||||| | ||||||||||||||||||| |||||||||||| ||||||||||    
T  36632207 ttgatctaacttattttgaccatatttttctactaatataaaaagataaataatatcatataagt 36632143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 7603354 - 7603417
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||| ||||||||| ||||||||||  |||||||||||| |||||||||    
T  7603354 ttgacctgacatattttgaccgtatttttatactaatatacaaagataaataatatcatataag 7603417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 25118833 - 25118896
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||| | | ||||||||||||||||  |||||||||||| |||||||||    
T  25118833 ttgacctaacatattttgaccttctttttctactaatatacaaagataaataatatcatataag 25118896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 29917942 - 29917879
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  29917942 ttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 29917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 38842210 - 38842273
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  38842210 ttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 38842273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 40645638 - 40645709
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||||||| ||| || |||||||||| || ||||||| ||||||||||||||||||  ||||||||||||    
T  40645638 atttgaaaattttcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 40645709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 9615523 - 9615633
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||| ||| |||||||||| ||||  |||||||||||||    |||||| |||||||| ||||| ||||||||| ||||||||||  |||||||||||    
T  9615523 tactccatccgtcctacaatatatgacctatttgaaaatatgtactattgatctaacatactttgaccgtatttttttactaatatacaaagataaataa 9615622  T
Q  236 tgtcatataag 246  Q
    | | |||||||    
T  9615623 tattatataag 9615633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 27301854 - 27301972
Alignment:
Q  129 ttaattattactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaag 227  Q
    |||| ||||||||||||| || | |||||||||| | |||||||||||||| || ||||  |||  || |||||   ||||||||||||||||||  |||    
T  27301854 ttaagtattactccctccgtcttgcaatagatgactcatttgaaaatattcaattttgatataatttactttgacaatatttttctactaatatacaaag 27301953  T
Q  228 ataaataatgtcatataag 246  Q
    ||||||||| |||||||||    
T  27301954 ataaataatatcatataag 27301972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 44887776 - 44887666
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||| ||||| ||||||||||| | | || ||||||| || || ||||| | ||||||||||||||||||  |||||||||||    
T  44887776 tactccctccgtcccgcaataaatgatctatttgaaaatgtgcaattttgacctgacttagtttgaccatatttttctactaatatacaaagataaataa 44887677  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  44887676 tatcatataag 44887666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 7431335 - 7431270
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||| |||||||||||||| |  |||||||||||||||||  |||||||||||| |||||||||    
T  7431335 tattgatctaacatattttgaccacatttttctactaatatacaaagataaataatatcatataag 7431270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 29616358 - 29616277
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||||  || |||| ||||| || ||||||| ||||| ||||||||||||  |||||||||||| |||||||||    
T  29616358 atttgaaaatattaaattttgatctaacttactttgatcatatttgtctactaatatacaaagataaataatatcatataag 29616277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 4327150 - 4327070
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||| ||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  4327150 tttgaaaatgtgcaattttgatctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 4327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 25691628 - 25691548
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  25691628 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 25691548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 30464462 - 30464542
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  30464462 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 30464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 3466330 - 3466393
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||||  ||||||||||||||||||  |||||||||||| |||||||||    
T  3466330 ttgacctaacttactttgattttatttttctactaatatacaaagataaataatatcatataag 3466393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 17523804 - 17523915
Alignment:
Q  136 ttactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    ||||| ||||| |||||||||||||||   |||||||||| | |  | || ||||||| || ||||||| ||||||||| ||||||||  ||||||||||    
T  17523804 ttacttcctccctcctacaatagatgacccatttgaaaatgtgcagttttaacctaacttactttgatcatatttttctgctaatatacaaagataaata 17523903  T
Q  235 atgtcatataag 246  Q
    || |||||||||    
T  17523904 atatcatataag 17523915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 20671303 - 20671366
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  20671303 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 20671366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 1156639 - 1156529
Alignment:
Q  137 tactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| ||||| ||||||||||| |||| ||||| |    |||||| |||||||| |||||  ||||||||||||| |||||  || ||||||||    
T  1156639 tactccctccatcctataatagatgatttatttaaaaatttatattattgatctaacatactttgactgtatttttctactgatatataaaaataaataa 1156540  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  1156539 tatcatataag 1156529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 1645419 - 1645357
Alignment:
Q  184 tgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| || ||||| ||||||||||||||||||||  || ||||||||| |||||||||    
T  1645419 tgacctaacttactttgaccgtatttttctactaatatacaaaaataaataatatcatataag 1645357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 4960168 - 4960261
Alignment:
Q  154 aatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| ||||||||||| | | || |||||||| | || ||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  4960168 aatagatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 4960261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 8496918 - 8496837
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | | || |||||||||| || ||||| | ||||||||||| ||||||  |||||||||||| |||||||||    
T  8496918 atttgaaaatgtgcaattttgacctaacttactttgaccatatttttctacgaatatacaaagataaataatatcatataag 8496837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 25256549 - 25256484
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||| ||||||| ||||||||||||||| ||  |||||||||||| |||| ||||    
T  25256549 tattgacttaacatactttgatcatatttttctactaatttacaaagataaataatatcatgtaag 25256484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 44039886 - 44039935
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  44039886 tttgatcatatttttctactaatatacaaagataaataatatcatataag 44039935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 11988739 - 11988811
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    ||||||||||| | |  ||||||| ||||||||||||| |||| |||||||||||||||  ||||||| ||||    
T  11988739 tatttgaaaatgtacattattgacttaacatattttgaccgtagttttctactaatatacaaagataagtaat 11988811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 14378717 - 14378637
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || |||||   ||||||||||||||||||  |||||||||||| |||||||||    
T  14378717 tttgaaaatgtgcaattttgacctaacttactttgactatatttttctactaatatataaagataaataatatcatataag 14378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 25009174 - 25009254
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||  || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  25009174 tttgaaaatgtgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataag 25009254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 9420797 - 9420714
Alignment:
Q  154 aatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||||||| ||||||||||| | |  |||||| |||||||||||||||| | | ||| ||||||||||  ||||||||||||    
T  9420797 aatagatgatctatttgaaaatgtgcattattgatctaacatattttgatcatgtgtttttactaatatacaaagataaataat 9420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 10658234 - 10658155
Alignment:
Q  141 ccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaat 219  Q
    |||||| |||| ||||||||||| ||||||| ||||| |  ||||||| ||||||| ||||| | |||||||||||||||    
T  10658234 ccctccgtccttcaatagatgatctatttgacaatatacattattgacttaacatactttgaccatatttttctactaat 10658155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 14511887 - 14511950
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||  ||||||| |||||||||| |||||||||  |||||||||||  |||||||||    
T  14511887 ttgacctaactaattttgaccgtatttttcaactaatatacaaagataaataacatcatataag 14511950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 20167593 - 20167660
Alignment:
Q  153 caatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaat 219  Q
    ||||||||||| ||||||| ||||| |  ||||||| ||||||||||||||  |||||||||||||||    
T  20167593 caatagatgatctatttgacaatatacactattgacttaacatattttgataatatttttctactaat 20167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 43184793 - 43184730
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  || ||||||||| |||||||||    
T  43184793 ttgacctaacttactttgaccatatttttctactaatatacaaaaataaataatatcatataag 43184730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 30653412 - 30653470
Alignment:
Q  188 ctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  30653412 ctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 30653470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 37094160 - 37094242
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||||||| | || ||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  37094160 tatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 37094242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 5777546 - 5777505
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  5777546 tatttttctactaatatacaaagataaataatatcatataag 5777505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 8059032 - 8058975
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| |||||||| | ||||||| ||||||||||  |||||||||||| |||||||||    
T  8059032 taacttattttgaccatatttttttactaatatacaaagataaataatatcatataag 8058975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 15870236 - 15870285
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||||||||||  || ||||||||| |||||||||    
T  15870236 tttgatcatatttttctactaatatacaaaaataaataatatcatataag 15870285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 23437805 - 23437764
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  23437805 tatttttctactaatatacaaagataaataatatcatataag 23437764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 29360952 - 29360899
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    |||| |||||||||  ||||| ||||||||||||||||||||  ||||||||||    
T  29360952 tattaacctaacatgctttgaccgtatttttctactaatatataaagataaata 29360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 42150150 - 42150101
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| |||||||||| |||||||||| |||||||||||  |||||||||    
T  42150150 tttgaccgtatttttcaactaatataaaaagataaataacatcatataag 42150101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 9459284 - 9459244
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataa 245  Q
    ||||||||||||||||||  |||||||||||| ||||||||    
T  9459284 tatttttctactaatatataaagataaataatatcatataa 9459244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 11756792 - 11756888
Alignment:
Q  153 caatagatga-ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatata-aga-agataaataatgtcatataag 246  Q
    |||||||||| |||||||||||| | | || |||||||||| || ||||| | |||||||| ||||||||| | | ||||||||||| |||||||||    
T  11756792 caatagatgacttatttgaaaatttgcaattttgacctaacttactttgaccatatttttcaactaatatatacatagataaataatatcatataag 11756888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 16345184 - 16345287
Alignment:
Q  143 ctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcat 241  Q
    |||| ||||||||||| |||  |||||||||||||   |||||||||||| ||| ||| | |||||  | |||||||||||  |||||||||||| ||||    
T  16345184 ctccgtcctacaataggtgacctatttgaaaatatgtaatattgacctaaaatactttaaccgtatgat-ctactaatatataaagataaataatatcat 16345282  T
Q  242 ataag 246  Q
    |||||    
T  16345283 ataag 16345287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 20671204 - 20671256
Alignment:
Q  184 tgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||| |||||||||||  |||||||| ||||||||||  ||||||||||||    
T  20671204 tgacctgacatattttgagtgtatttttatactaatatacaaagataaataat 20671256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 21132959 - 21132879
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || ||||| |||| || ||||| | ||||||||||||||||||  |||| ||||||| |||||||||    
T  21132959 tttgaaaatgtgcaattttgacttaacttactttgaccatatttttctactaatatacaaagaaaaataatatcatataag 21132879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 23631651 - 23631541
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||||| |||||| |  |||||||||||||    |||| |||||||||| ||||| ||||||||||||||||||||  |||||||||||    
T  23631651 tactccctccgtcctacgatagataacctatttgaaaatatgtattattaacctaacatactttgaccgtatttttctactaatatacaaagataaataa 23631552  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  23631551 tatcatataag 23631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 53275026 - 53274944
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||||||||| |||||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  53275026 tatttgaaaatgtgcaattttgacctaacttattttgatcatatttttctactaatatacaaagataaataatatcatataag 53274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 901153 - 901037
Alignment:
Q  131 aattattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagat 229  Q
    |||| ||||||||||| |||  ||||| ||||| | ||||||||| | | || |||||||||| || ||||||| ||||||||||||||||||  |||||    
T  901153 aatttttactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagat 901054  T
Q  230 aaataatgtcatataag 246  Q
    ||||||| |||||||||    
T  901053 aaataatatcatataag 901037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 28229104 - 28229005
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||||||||||||||  ||||||||||| |||  |||||||||||||||||||||  |||||||| || |||||||  |||||||||||    
T  28229104 tactccctccgtcctacaatagatgacctatttgaaaatgttcactattgacctaacatattttgactgtattttt-tattaatatacaaagataaataa 28229006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 34669638 - 34669718
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  34669638 tttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 34669718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 37166481 - 37166592
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaa-tattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    ||||| |||| |||||||||||||||  ||||| |||| ||| |  |||||||  |||||||||||| |||||||||| |||||||||| ||||||||||    
T  37166481 tactctctccgtcctacaatagatgacctatttaaaaaatatgctctattgacgaaacatattttgaccgtatttttccactaatataaaaagataaata 37166580  T
Q  235 atgtcatataag 246  Q
    || | |||||||    
T  37166581 atattatataag 37166592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 4229247 - 4229137
Alignment:
Q  137 tactccctccttcctacaatagatga-ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||| ||||| |||| |||||||||||| | | || |||||||| | || ||||||| ||||||| ||||||||||   ||||||||||    
T  4229247 tactccctccatcctgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatttttttactaatatacatagataaataa 4229148  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  4229147 tatcatataag 4229137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 29720395 - 29720505
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||| ||||| | ||||||||| | | || |||||||||| || ||||||| |||||||| |||||||||  |||||||||||    
T  29720395 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcctatttttccactaatatataaagataaataa 29720494  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  29720495 tatcatataag 29720505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 29793441 - 29793327
Alignment:
Q  133 ttattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataa 231  Q
    |||||||||||||| |||  ||||| ||||  | ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||    
T  29793441 ttattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataa 29793342  T
Q  232 ataatgtcatataag 246  Q
    ||||| |||||||||    
T  29793341 ataatatcatataag 29793327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 50888356 - 50888454
Alignment:
Q  148 tcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    |||| ||||||||||| ||||||||||||| |  |||||||| |||||| |||||   ||||||||| ||||||||  |||||||||||| ||||||||    
T  50888356 tccttcaatagatgatctatttgaaaatatgcactattgaccaaacataatttgactatatttttctgctaatatacaaagataaataatatcatataa 50888454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 9484593 - 9484706
Alignment:
Q  134 tattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaa 232  Q
    ||||||||||||| |||  ||||| ||||  | ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  ||||||||    
T  9484593 tattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaa 9484692  T
Q  233 taatgtcatataag 246  Q
    |||| |||||||||    
T  9484693 taatatcatataag 9484706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 21271897 - 21271962
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||| |||||||||||| || |||||||||| ||||||||||| | |||||||||    
T  21271897 tattgacttaacatactttgatcgtattgttatactaatatacgaagataaatattatcatataag 21271962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 12948070 - 12948150
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  12948070 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 12948150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 16434886 - 16434806
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| |||||||| | ||||||| ||||||||||  |||||||||||| |||||||||    
T  16434886 tttgaaaatgtgcaattttgacctaacttattttgaccatatttttttactaatatacaaagataaataatatcatataag 16434806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 29455737 - 29455657
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  29455737 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 29455657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 32961293 - 32961357
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataagt 247  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| ||||||||||    
T  32961293 ttgacctaacttagtttgaccatatttttctactaatatacaaagataaataatatcatataagt 32961357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 38878479 - 38878427
Alignment:
Q  194 tattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||| | ||||||||||||||||||| |||||||||||| |||||||||    
T  38878479 tattttgaccatatttttctactaatataaaaagataaataatatcatataag 38878427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 42098656 - 42098576
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  42098656 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 42098576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 47069406 - 47069506
Alignment:
Q  137 tactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| ||| |||||||||||   |||||||||| ||| || |||||||||| || |||||  ||||||||||||| |||||  |||||||||||    
T  47069406 tactccctccgtcccacaatagatgacacatttgaaaattttcaattttgacctaacctactttgactgtatttttctactgatatacaaagataaataa 47069505  T
Q  236 t 236  Q
    |    
T  47069506 t 47069506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 49076455 - 49076375
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  49076455 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 49076375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 54684673 - 54684617
Alignment:
Q  190 aacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||| | |||||||    
T  54684673 aacatattttgaccgtatttttctactaatatacaaagataaataatattatataag 54684617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 10819491 - 10819392
Alignment:
Q  148 tcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||| ||||||  ||||||||||||| |  |||| |||||||||| ||||   |||||||||||||||||||   ||||||||||| |||||||||    
T  10819491 tcctacaagagatgacctatttgaaaatatgcactatttacctaacatactttggcagtatttttctactaatatacacagataaataatatcatataag 10819392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 34263716 - 34263653
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  34263716 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 34263653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 34555198 - 34555261
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  34555198 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 34555261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 36364775 - 36364712
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| |||||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  36364775 ttgacctaacttattttgaccatatttttctactaatatacatagataaataatatcatataag 36364712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 2643332 - 2643218
Alignment:
Q  133 ttattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataa 231  Q
    |||||||||||||| |||  ||||||||||  ||||||||||| | | || ||||||||   || ||||| | ||||||||||||||||||  || ||||    
T  2643332 ttattactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatatttttctactaatatacaaatataa 2643233  T
Q  232 ataatgtcatataag 246  Q
    ||||| |||||||||    
T  2643232 ataatatcatataag 2643218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 4945910 - 4945800
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| ||| || ||||||||  ||||||| ||| | | || |||||||||| || ||||| | ||||||||||||||||||   ||||||||||    
T  4945910 tactccctccgtcccaccatagatgacgtatttgagaatttgcaattttgacctaacttactttgaccatatttttctactaatatacatagataaataa 4945811  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  4945810 tatcatataag 4945800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 28959042 - 28958948
Alignment:
Q  153 caatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| ||||| ||||| | | || |||||||| | || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  28959042 caatagatgatctatttaaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatataaagataaataatatcatataag 28958948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 48927861 - 48927751
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||| ||||| | ||||||||| | | || || ||||||| || ||||| | ||||||||||||||||||  |||||||||||    
T  48927861 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaatttttacctaacttactttgaccatatttttctactaatatacaaagataaataa 48927762  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  48927761 tatcatataag 48927751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 52094137 - 52094043
Alignment:
Q  153 caatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| | |||||||||| | | || |||| ||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  52094137 caatagatgactcatttgaaaatttgcaattttgatctaacttaatttgaccatatttttctactaatatacaaagataaataatatcatataag 52094043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 18013468 - 18013419
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  18013468 tttgatcatatttttctactaatatacaaagataaataatatcatataag 18013419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 29809342 - 29809455
Alignment:
Q  134 tattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaa 232  Q
    ||||||||||||| |||  ||||||||||  ||||||||||| | | || |||| ||| | || || || | |||||||||| |||||||  ||||||||    
T  29809342 tattactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgatctagcttacttcgaccatatttttctattaatatacaaagataaa 29809441  T
Q  233 taatgtcatataag 246  Q
    ||||||||||||||    
T  29809442 taatgtcatataag 29809455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 35717854 - 35717955
Alignment:
Q  136 ttactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    |||| |||||| |||| ||||||||||  ||||||| ||||| |  ||||||| ||||||||||||| | |||||||||||||||  |  ||||||||||    
T  35717854 ttacaccctccgtccttcaatagatgacgtatttgacaatatacattattgacttaacatattttgaccatatttttctactaattcacaaagataaata 35717953  T
Q  235 at 236  Q
    ||    
T  35717954 at 35717955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 36179134 - 36179085
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  36179134 tttgatcatatttttctactaatatacaaagataaataatatcatataag 36179085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 47340082 - 47340033
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  47340082 tttgatcatatttttctactaatatataaagataaataatatcatataag 47340033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 53055683 - 53055574
Alignment:
Q  138 actccctccttcctacaatagatgatta-tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    ||||||||| |||||||||| ||||  | ||||||||| |   || ||||||||||  ||||||| | ||||||||||||||||||  ||||||||||||    
T  53055683 actccctccgtcctacaataaatgaccaatttgaaaatgtgtaattttgacctaactaattttgaccatatttttctactaatatacaaagataaataat 53055584  T
Q  237 gtcatataag 246  Q
     |||| ||||    
T  53055583 atcatttaag 53055574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 935076 - 935140
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    |||||||||||||| ||| || | |||||||||||||||| |  |||||||||||| ||||||||    
T  935076 tattgacctaacatgtttcgaccatatttttctactaataaataaagataaataatatcatataa 935140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 36594431 - 36594367
Alignment:
Q  183 ttgacctaacatattttgatcgtattttt-ctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| |||||||||| ||||||| ||| |||||||  |||||||||||| |||||||||    
T  36594431 ttgacctaacttattttgatcatattttttctattaatatataaagataaataatatcatataag 36594367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 43370319 - 43370391
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    ||||||||||| | | || ||||| |||| || ||||||||||||||| ||||||||||  ||||||||||||    
T  43370319 tatttgaaaatgtgcaattttgacataacttactttgatcgtatttttatactaatatacaaagataaataat 43370391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 46866373 - 46866453
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| |||||||    ||||||||||||||||||  |||||||||||| |||||||||    
T  46866373 tttgaaaatgtgcaattttgacctaacttattttggcaatatttttctactaatatacaaagataaataatatcatataag 46866453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 50673707 - 50673787
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || ||||| |||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  50673707 tttgaaaatgtgcaattttgacttaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 50673787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 21489963 - 21490018
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    ||||||||||||||| ||||| ||||||||| || |||||||  ||||||||||||    
T  21489963 tattgacctaacatactttgaccgtatttttttattaatatacaaagataaataat 21490018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 26759526 - 26759589
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  26759526 ttgacctaacttactttgaccatatttttctactaatatacatagataaataatatcatataag 26759589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 45093936 - 45093897
Alignment:
Q  180 atattgacctaacatattttgatcgtatttttctactaat 219  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  45093936 atattgacttaacatattttgatcatatttttctactaat 45093897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 1325556 - 1325498
Alignment:
Q  186 acctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatata 244  Q
    ||||||| || ||||||  ||||||||||||||||||  |||||||||||| |||||||    
T  1325556 acctaacttactttgattatatttttctactaatatataaagataaataatatcatata 1325498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 246
Target Start/End: Original strand, 1778357 - 1778471
Alignment:
Q  133 ttattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataa 231  Q
    |||||||| ||||| |||  ||||||||||  ||||||||||| | | || ||||| || | || ||||| | ||||||||||||||||||   ||||||    
T  1778357 ttattacttcctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacttagcttactttgaccatatttttctactaatatacatagataa 1778456  T
Q  232 ataatgtcatataag 246  Q
    ||||| |||||||||    
T  1778457 ataatatcatataag 1778471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 4464881 - 4464991
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||||||||| ||||||||||| | | || || |||||   || ||||||| ||||||||||||||| ||   ||||||||||    
T  4464881 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaatgttaacctagtttactttgatcatatttttctactaatgtacatagataaataa 4464980  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  4464981 tatcatataag 4464991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 43394565 - 43394507
Alignment:
Q  188 ctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| |||||||| | |||||||||||||||| |  |||||||||||| |||||||||    
T  43394565 ctaacttattttgaccatatttttctactaataaacaaagataaataatatcatataag 43394507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 5029988 - 5030089
Alignment:
Q  137 tactccctcc-ttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    |||||||||| || |||||||||||||  ||||| ||||| | |  ||||||| ||| ||| ||||| |||| |||||||||||||||  ||||||||||    
T  5029988 tactccctccgtttctacaatagatgacctatttaaaaatgtgcattattgacttaatatactttgaccgtacttttctactaatatacaaagataaata 5030087  T
Q  235 at 236  Q
    ||    
T  5030088 at 5030089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 38833977 - 38833924
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||||||| || ||||| | ||||||||||||||||||  ||||||||||||    
T  38833977 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 42247157 - 42247222
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||| ||||||||| | |||||||||||||| |||  |||||||||||| || ||||||    
T  42247157 tattgacgtaatatattttgaccatatttttctactaaaatataaagataaataatatcttataag 42247222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 48143979 - 48143914
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||| ||||||||| | ||||||||||||||| ||  |||||||||||| |||| ||||    
T  48143979 tattgacataatatattttgaccatatttttctactaatttacaaagataaataatatcatgtaag 48143914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 48690245 - 48690204
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  48690245 tatttttctactaatatacaaagataaataatatcatataag 48690204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 15503268 - 15503184
Alignment:
Q  153 caatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    ||||||||||| || |||| ||||| |  ||||||| ||| ||| ||||||| ||||||||||||||| ||| |||| |||||||    
T  15503268 caatagatgatctagttgataatatacattattgacttaatatactttgatcttatttttctactaatttaaaaagaaaaataat 15503184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 8048819 - 8048706
Alignment:
Q  134 tattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaa 232  Q
    ||||||||||||| |||| ||||||||||  ||||||||||| | | || |||||||| | |||||||| | ||||||||||||||||||   |||||||    
T  8048819 tattactccctccgtcctgcaatagatgacctatttgaaaatttgcaattttgacctagcttattttgaccatatttttctactaatatacatagataaa 8048720  T
Q  233 taatgtcatataag 246  Q
    |||| |||||||||    
T  8048719 taatatcatataag 8048706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 48312045 - 48312138
Alignment:
Q  153 caatagatgattatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||  |||||||||| | | || ||| | |||| |||||||||||||||||||||||||||||  |||||||||||| | |||||||    
T  48312045 caatagatgaccatttgaaaatgtgcaattttggcttaacttattttgatcgtatttttctactaatatacaaagataaataatattatataag 48312138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 2612098 - 2612034
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    |||||||||||||||||||||  |||||||| ||||||||||| |||||||||||| | ||||||    
T  2612098 tattgacctaacatattttgactgtatttttttactaatataaaaagataaataatataatataa 2612034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 27462746 - 27462848
Alignment:
Q  143 ctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcat 241  Q
    |||| |||||| ||||||||  ||||||||||||| |  ||||||||||||||||||  | |||| | |||||||||||||  |||||||||||| ||||    
T  27462746 ctccgtcctacgatagatgacctatttgaaaatatgcactattgacctaacatattt--accgtaatattctactaatataccaagataaataatatcat 27462843  T
Q  242 ataag 246  Q
    |||||    
T  27462844 ataag 27462848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 232
Target Start/End: Original strand, 38737377 - 38737474
Alignment:
Q  136 ttactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaa 232  Q
    ||||||||||| ||| |||||||||||| ||||||| ||| |   |||||||| ||||||  |||||| |||||||||||||||||||  ||||||||    
T  38737377 ttactccctccgtcccacaatagatgatctatttgacaatgtataatattgacttaacattctttgattgtatttttctactaatatataaagataaa 38737474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 48896964 - 48897029
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| ||||||||| | ||||||||||||||||||  || ||||||||| |||||||||    
T  48896964 tattgacctaaaatattttgaccatatttttctactaatatataaacataaataatatcatataag 48897029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 10100551 - 10100471
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  10100551 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 10100471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 52749331 - 52749391
Alignment:
Q  186 acctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  52749331 acctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 52749391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 2139046 - 2138987
Alignment:
Q  187 cctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  2139046 cctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 2138987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 23337854 - 23337917
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  23337854 ttgacctaacttagtttgaccatatttttctactaatatacaaagataaataatatcatataag 23337917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 43453186 - 43453123
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| |||||||| | |||||||||| |||||||  |||||||||||| |||||||||    
T  43453186 ttgacctaacttattttgaccatatttttctattaatatacaaagataaataatatcatataag 43453123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 44741390 - 44741453
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| ||||| |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  44741390 ttgatctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 44741453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 49903706 - 49903643
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||  || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  49903706 ttgacctaatttactttgatcatatttttctactaatatacaaagataaataatatcatataag 49903643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 31932246 - 31932136
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||||||||| ||||||||||| | | || ||||||||   || ||||| | ||||||||||||||||||  || ||||||||    
T  31932246 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagtttactttgaccatatttttctactaatatacaaatataaataa 31932147  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  31932146 tatcatataag 31932136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 51924994 - 51924928
Alignment:
Q  181 tattgacctaacatattttgatcgta-tttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||||| |||| ||||| ||| ||||||  |||||||||||| |||||||||    
T  51924994 tattgacctaacatattttgaccgtattttttttaccaatatacaaagataaataatatcatataag 51924928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 1821699 - 1821586
Alignment:
Q  134 tattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaa 232  Q
    ||||||||||||| |||  |||||||||   ||||||||||| | | || |||||||||| || ||||| | |||||||| | |||||||  ||||||||    
T  1821699 tattactccctccgtccggcaatagatggcctatttgaaaatgtgcaattttgacctaacttactttgaccatatttttccattaatatacaaagataaa 1821600  T
Q  233 taatgtcatataag 246  Q
    |||| |||||||||    
T  1821599 taatatcatataag 1821586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 27581120 - 27581039
Alignment:
Q  154 aatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaata 234  Q
    ||||||||||| |||||| |||||   || ||||||||||||| ||||||| |||||||||| |||||||  ||||||||||    
T  27581120 aatagatgatttatttgacaatatgtaattttgacctaacatactttgatcatatttttctaataatatacaaagataaata 27581039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 31971440 - 31971497
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||| |||||||||||||||  |  |||||||||||| |||||||||    
T  31971440 taacatattttgatcatatttttctactaattaacaaagataaataatatcatataag 31971497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 38786985 - 38786904
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||| | || ||||  |||| || ||||||| |||||||| |||||||||  |||||||||||| |||||||||    
T  38786985 atttgaaaatatgcaattttgatataacttactttgatcatatttttcaactaatatacaaagataaataatatcatataag 38786904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 6017487 - 6017407
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||| ||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  6017487 tttgaaaatgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 6017407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 10124139 - 10124219
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| | |||||||    
T  10124139 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatattatataag 10124219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 26543898 - 26543978
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| | |||||||    
T  26543898 tttgaaaatgtacaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatattatataag 26543978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 32968143 - 32968223
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| ||||| | || |||| || |||||||||||  |||||||| ||||||||||  |||||||||||| |||||||||    
T  32968143 tttgacaatatacaattttgaactgacatattttgactgtatttttatactaatatacaaagataaataatatcatataag 32968223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 36035747 - 36035795
Alignment:
Q  197 tttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    ||||||| ||||||||||||||||||  |||||||||||| ||||||||    
T  36035747 tttgatcatatttttctactaatatacaaagataaataatatcatataa 36035795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 41414203 - 41414311
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||| |||||||| |  ||||||||||| | | || |||||||| | || ||||| | ||||||||||||||||||   ||||||||||    
T  41414203 tactccctccgtcctgcaatagattacctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataa 41414302  T
Q  236 tgtcatata 244  Q
    | |||||||    
T  41414303 tatcatata 41414311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 45299348 - 45299428
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||| ||||||||||  |||||||||||| |||||||||    
T  45299348 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttatactaatatacaaagataaataatatcatataag 45299428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 47912339 - 47912391
Alignment:
Q  194 tattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  47912339 tattttgaccatatttttctactaatatacaaagataaataatatcatataag 47912391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 52688546 - 52688641
Alignment:
Q  153 caatagatgattatttgaaaatattccatattgacctaacatattttgatcgtatttttctac--taatataagaagataaataatgtcatataag 246  Q
    ||||||||||| |||||||||| |   || |||||||||| || |||||  ||||||||||||  |||||||  |||||||||||| |||||||||    
T  52688546 caatagatgatcatttgaaaatgtggaattttgacctaacttactttgactgtatttttctactataatatacaaagataaataatatcatataag 52688641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 7075351 - 7075288
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||| ||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  7075351 ttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 7075288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 44963693 - 44963630
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||  ||||||| |||||||||| |||||||||  |||||||||||  |||||||||    
T  44963693 ttgacctaactgattttgaccgtatttttcaactaatatacaaagataaataacatcatataag 44963630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 27990760 - 27990814
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    ||||||||||||||| ||||| | ||||||||||||||||||  || ||||||||    
T  27990760 tattgacctaacatactttgaccatatttttctactaatatacaaaaataaataa 27990814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 32495253 - 32495199
Alignment:
Q  188 ctaacatattttgatcgtatttttctactaatataagaagataaataatgtcata 242  Q
    |||||||||||||| | |||||||| |||||||||  |||||||||||| |||||    
T  32495253 ctaacatattttgaccatatttttcgactaatatacaaagataaataatatcata 32495199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 41855761 - 41855679
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||||||| | || ||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  41855761 tatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 41855679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 48389094 - 48389176
Alignment:
Q  164 tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | | || |||||||| | || ||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  48389094 tatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 48389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 5606390 - 5606349
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  5606390 tatttttctactaatatacaaagataaataatatcatataag 5606349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 5945834 - 5945875
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  5945834 tatttttctactaatatacaaagataaataatatcatataag 5945875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 31651900 - 31651859
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  31651900 tatttttctactaatatacaaagataaataatatcatataag 31651859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15443456 - 15443412
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaat 233  Q
    |||||| |||||||| ||||||||||||||||||  |||||||||    
T  15443456 taacatgttttgatcatatttttctactaatatataaagataaat 15443412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 50014611 - 50014519
Alignment:
Q  155 atagatga-ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||| |||||||||||| | | || |||| ||| | || ||||| | ||||||||||||||||||   ||||||||||| |||||||||    
T  50014611 atagatgacttatttgaaaatttgcaattttgatctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 50014519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 9022838 - 9022950
Alignment:
Q  135 attactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaat 233  Q
    |||||||||||| |||| ||||| ||||  | ||||||||||| | || ||||||||||||| ||||| | ||||||||||||||||||  || ||||||    
T  9022838 attactccctccgtcctgcaataaatgacctgtttgaaaatatgcaattttgacctaacatactttgaccatatttttctactaatatacaaaaataaat 9022937  T
Q  234 aatgtcatataag 246  Q
    ||| |||||||||    
T  9022938 aatatcatataag 9022950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 31708893 - 31709003
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||| ||||||||||| ||||| ||||| | | || ||||| |||  || ||||| ||||||||||||||||||||  |||||||||||    
T  31708893 tactccctccgtcctgcaatagatgatctatttaaaaatgtgcaattttgacttaatttactttgaccgtatttttctactaatatacaaagataaataa 31708992  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  31708993 tatcatataag 31709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 2141598 - 2141678
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  2141598 tttgaaaatgtacaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 2141678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 6142545 - 6142465
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  6142545 tttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 6142465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 29515064 - 29514984
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||    
T  29515064 tttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 29514984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 16661623 - 16661560
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| ||||||||||||||||||||  |||||||||||| |||||||||    
T  16661623 ttgacctaacttactttgaccgtatttttctactaatatataaagataaataatatcatataag 16661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 24798618 - 24798504
Alignment:
Q  133 ttattactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataa 231  Q
    |||||||||||||| |||  ||||| ||||  | ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||    
T  24798618 ttattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataa 24798519  T
Q  232 ataatgtcatataag 246  Q
    ||||| |||||||||    
T  24798518 ataatatcatataag 24798504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 4890196 - 4890084
Alignment:
Q  135 attactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaat 233  Q
    |||||||||||| || | |||||||||||  |||| ||||| | | || |||||||||  || ||||| | ||||||||||||||||||  |||||||||    
T  4890196 attactccctccgtcatgcaatagatgatccatttaaaaatgtgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaat 4890097  T
Q  234 aatgtcatataag 246  Q
    ||| |||||||||    
T  4890096 aatatcatataag 4890084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 16120889 - 16120833
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||||||| ||||||||    
T  16120889 taacatattttgaccgtatttttttactaatatacaaagataaataatatcatataa 16120833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 17417752 - 17417672
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| ||||| | || |||||| |||||| ||| ||| ||||||||||||||||||  |||||||||||| |||||||||    
T  17417752 tttgacaatatgcaattttgaccaaacataatttaatcatatttttctactaatatacaaagataaataatatcatataag 17417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 24825195 - 24825275
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  24825195 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 24825275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 32541515 - 32541435
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||| | || |||||||||  || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  32541515 tttgaaaatatgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataag 32541435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 30699308 - 30699371
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  30699308 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 30699371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 17496386 - 17496281
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||| ||||| | ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||    
T  17496386 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 17496287  T
Q  236 tgtcat 241  Q
    | ||||    
T  17496286 tatcat 17496281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 24693195 - 24693248
Alignment:
Q  193 atattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  24693195 atattttgaccatatttttctactaatatacaaagataaataatatcatataag 24693248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 2397800 - 2397880
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||  || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  2397800 tttgaaaatgtgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataag 2397880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 2656708 - 2656628
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || |||||   ||||||||||||||||||  |||||||||||| |||||||||    
T  2656708 tttgaaaatgtgcaattttgacctaacttactttgactatatttttctactaatatacaaagataaataatatcatataag 2656628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 6188694 - 6188614
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||| ||||||||||  |||||||||||| |||||||||    
T  6188694 tttgaaaatgtgcaattttgacctaacttactttgagcatatttttttactaatatataaagataaataatatcatataag 6188614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 10105858 - 10105921
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||| |||| |||||| | | ||||||||||||||||||  |||||||||||| |||||||||    
T  10105858 ttgacttaacttattttaaccatatttttctactaatatataaagataaataatatcatataag 10105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 2667393 - 2667283
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| |||  ||||| ||||| | ||||||||| | | || |||||||||| || |||||   |||||||||||||||| |  |||||||||||    
T  2667393 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgactatatttttctactaataaacaaagataaataa 2667294  T
Q  236 tgtcatataag 246  Q
    | |||||||||    
T  2667293 tatcatataag 2667283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 12869427 - 12869373
Alignment:
Q  191 acatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    ||||| ||||| | ||||||||||||||||||  |||||||||||| ||||||||    
T  12869427 acatagtttgaccatatttttctactaatatacaaagataaataatatcatataa 12869373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 995632 - 995673
Alignment:
Q  205 tatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  995632 tatttttctactaatatacaaagataaataatatcatataag 995673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 3686992 - 3686951
Alignment:
Q  181 tattgacctaacatattttgatcgtatttttctactaatata 222  Q
    ||||||||||||||| ||||||| |||||||||| |||||||    
T  3686992 tattgacctaacatactttgatcatatttttctattaatata 3686951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 17179447 - 17179356
Alignment:
Q  154 aatagatga-ttatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| |||||||||||||| |  |||||||  ||||||||||||  ||||||| |||||||||||  |||||||||||| | |||||||    
T  17179447 aatagatgacttatttgaaaatatacactattgaca-aacatattttgactgtatttt-ctactaatatacaaagataaataatattatataag 17179356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 32673765 - 32673858
Alignment:
Q  154 aatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||| ||||| ||||| | | || |||| ||||| |||||||| | ||||||||||||||||||   ||| ||||||| |||||||||    
T  32673765 aatagatgatctatttaaaaatttgcaattttgatctaacttattttgaccatatttttctactaatatacatagagaaataatatcatataag 32673858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 2555295 - 2555351
Alignment:
Q  189 taacatattttgatcgtatttttctactaatataagaagataaataatgtcatataa 245  Q
    |||||||||||||  |||||||  ||||||||||| |||||||||||| | ||||||    
T  2555295 taacatattttgactgtattttcttactaatataaaaagataaataatattatataa 2555351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 710 - 629
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    |||||||||||| | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  710 atttgaaaatatgcaattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataatatcatataag 629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 1036 - 1099
Alignment:
Q  183 ttgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||| ||||||||||| ||||||||| ||||||||||  |||||||||||| |||||||||    
T  1036 ttgacctgacatattttgaccgtatttttatactaatatacaaagataaataatatcatataag 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 4441 - 4552
Alignment:
Q  137 tactccctccttcctacaatagatgatt-atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||| ||| |||| ||||| |||||| |||| ||||| | | || |||||||||| |||||||| |||||||||||||||||||   |||||||||||    
T  4441 tactccttccgtcctgcaataaatgattcatttaaaaatgtgcaattttgacctaacttattttgaccgtatttttctactaatatgcaaagataaataa 4540  T
Q  236 tgtcatataagt 247  Q
    | | ||||||||    
T  4541 tattatataagt 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 5406 - 5486
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  5406 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 5486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 23984 - 23915
Alignment:
Q  165 atttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataat 236  Q
    |||||||||| | | || |||||||||| || ||||||||||||||||||||||||||  ||||||||||||    
T  23984 atttgaaaatgtgcaattttgacctaacttactttgatcgtatttttctactaatata--aagataaataat 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 24264 - 24164
Alignment:
Q  137 tactccctccttcctacaatagatgat-tatttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataa 235  Q
    |||||||||| || || |||||||||  ||||| ||||| | |  ||||||| ||||||||||||| ||||||||||||||||||||  |||||| ||||    
T  24264 tactccctccgtcttataatagatgacctatttaaaaatgtgcactattgacttaacatattttgaccgtatttttctactaatatacaaagatagataa 24165  T
Q  236 t 236  Q
    |    
T  24164 t 24164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 183996 - 184076
Alignment:
Q  166 tttgaaaatattccatattgacctaacatattttgatcgtatttttctactaatataagaagataaataatgtcatataag 246  Q
    ||||||||| | | || |||||||||| || ||||| | ||||||||||||||||||  |||||||||||| |||||||||    
T  183996 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 184076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University