View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5933_low_31 (Length: 237)
Name: NF5933_low_31
Description: NF5933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5933_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 27464696 - 27464918
Alignment:
| Q |
1 |
ttcccaaagaaaatgattaagcttcatggccacagcctattggaatattattagtcaccatcaaccagaacctccaagaaaaatcaaatatgaattaagg |
100 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27464696 |
ttcccaaagaaaatgattaagcttcatgaccacagcctattggaatattattagtcaccatcaaccagaacctccaagaaaaatcaaatatgaattaagg |
27464795 |
T |
|
| Q |
101 |
gaaattttatactagtataaagaacttaccgtcaccaatggccagtgtcatatcatctgtgcggctctttatcagatcaacaattccagccttctgcaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27464796 |
gaaattttatactagtataaagaacttaccgtcaccaatggccagtgtcatatcatctgtgcggctctttatcagatcaacaattccagccttctgcaag |
27464895 |
T |
|
| Q |
201 |
ggtgcaacacgacaacacagcac |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
27464896 |
ggtgcaacacgacaacacagcac |
27464918 |
T |
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