View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5935-Insertion-2 (Length: 1060)

Name: NF5935-Insertion-2
Description: NF5935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5935-Insertion-2
NF5935-Insertion-2
[»] chr2 (34 HSPs)
chr2 (357-886)||(44204120-44204661)
chr2 (9-329)||(44203793-44204114)
chr2 (890-1027)||(45034403-45034546)
chr2 (890-1027)||(45571035-45571178)
chr2 (890-1027)||(45574702-45574845)
chr2 (890-1027)||(45578369-45578512)
chr2 (890-1027)||(45582036-45582179)
chr2 (890-1027)||(45585703-45585846)
chr2 (890-1027)||(45589370-45589513)
chr2 (890-1027)||(45593037-45593180)
chr2 (890-1027)||(45596704-45596847)
chr2 (890-1027)||(45600371-45600514)
chr2 (890-1027)||(45604038-45604181)
chr2 (890-1027)||(45607705-45607848)
chr2 (890-1027)||(45611372-45611515)
chr2 (890-1027)||(45615039-45615182)
chr2 (891-1027)||(4044574-4044716)
chr2 (898-1027)||(4063285-4063420)
chr2 (890-1027)||(3838417-3838560)
chr2 (469-557)||(27327862-27327955)
chr2 (469-557)||(32473486-32473579)
chr2 (469-557)||(38721415-38721508)
chr2 (469-557)||(40739524-40739617)
chr2 (469-509)||(33150090-33150130)
chr2 (469-548)||(37486040-37486124)
chr2 (469-509)||(42955118-42955158)
chr2 (447-509)||(15178086-15178148)
chr2 (445-509)||(36490564-36490625)
chr2 (446-506)||(38532442-38532499)
chr2 (469-506)||(20128759-20128796)
chr2 (469-557)||(20195304-20195397)
chr2 (469-557)||(32070476-32070569)
chr2 (469-510)||(34240839-34240880)
chr2 (469-557)||(42579051-42579144)
[»] chr5 (18 HSPs)
chr5 (890-1027)||(29031036-29031179)
chr5 (880-1027)||(22731258-22731412)
chr5 (890-1027)||(1015155-1015298)
chr5 (890-1027)||(15968316-15968459)
chr5 (890-1027)||(27488352-27488495)
chr5 (447-509)||(27990442-27990501)
chr5 (473-557)||(6638283-6638372)
chr5 (469-509)||(20361992-20362032)
chr5 (469-509)||(23117563-23117603)
chr5 (469-509)||(24433550-24433590)
chr5 (469-509)||(29807093-29807133)
chr5 (469-509)||(39126099-39126139)
chr5 (469-509)||(39602989-39603029)
chr5 (470-557)||(40208493-40208585)
chr5 (469-506)||(25257159-25257196)
chr5 (469-506)||(25320949-25320986)
chr5 (469-506)||(29807164-29807201)
chr5 (469-557)||(34186370-34186463)
[»] chr4 (29 HSPs)
chr4 (890-1027)||(47866041-47866184)
chr4 (890-1020)||(20459247-20459383)
chr4 (890-1024)||(43020761-43020901)
chr4 (891-1027)||(20745331-20745473)
chr4 (890-1027)||(42804261-42804404)
chr4 (896-1027)||(27841843-27841979)
chr4 (893-1027)||(3043800-3043940)
chr4 (469-543)||(11583753-11583832)
chr4 (890-978)||(20956895-20956986)
chr4 (469-557)||(16391207-16391300)
chr4 (469-557)||(26206609-26206702)
chr4 (469-557)||(30162643-30162736)
chr4 (469-557)||(44639778-44639871)
chr4 (469-555)||(48042625-48042716)
chr4 (469-557)||(39294205-39294298)
chr4 (469-509)||(17659550-17659590)
chr4 (469-509)||(39754114-39754154)
chr4 (469-509)||(50038465-50038505)
chr4 (469-509)||(50045687-50045727)
chr4 (469-509)||(50519347-50519387)
chr4 (469-547)||(45070850-45070932)
chr4 (445-506)||(55131624-55131682)
chr4 (890-1027)||(55190666-55190809)
chr4 (469-507)||(16391761-16391799)
chr4 (469-557)||(4711421-4711514)
chr4 (469-557)||(41788953-41789046)
chr4 (469-557)||(45890937-45891030)
chr4 (469-557)||(46996506-46996599)
chr4 (446-509)||(53019221-53019281)
[»] chr7 (21 HSPs)
chr7 (890-1027)||(27231833-27231976)
chr7 (882-1027)||(4826758-4826910)
chr7 (890-1027)||(32811377-32811520)
chr7 (882-1022)||(1366599-1366746)
chr7 (890-1012)||(31227498-31227626)
chr7 (469-557)||(11032318-11032411)
chr7 (469-509)||(3498309-3498349)
chr7 (469-509)||(25099551-25099591)
chr7 (447-509)||(27234943-27235002)
chr7 (469-509)||(45833275-45833315)
chr7 (469-509)||(46658817-46658857)
chr7 (466-509)||(9140233-9140276)
chr7 (470-509)||(27942341-27942380)
chr7 (918-1012)||(42456994-42457093)
chr7 (471-509)||(46578282-46578320)
chr7 (469-566)||(7344922-7345016)
chr7 (476-509)||(27042185-27042218)
chr7 (472-509)||(31365653-31365690)
chr7 (469-557)||(33471505-33471598)
chr7 (446-509)||(35160744-35160804)
chr7 (469-557)||(48590617-48590710)
[»] chr8 (26 HSPs)
chr8 (891-1027)||(44796348-44796490)
chr8 (890-1027)||(36366024-36366167)
chr8 (891-1027)||(12958782-12958924)
chr8 (890-1027)||(22429540-22429683)
chr8 (890-1035)||(42786369-42786519)
chr8 (881-978)||(24177967-24178068)
chr8 (890-1027)||(6899425-6899568)
chr8 (890-1027)||(35011217-35011362)
chr8 (469-557)||(43483947-43484040)
chr8 (469-509)||(44838789-44838829)
chr8 (476-557)||(34188340-34188426)
chr8 (472-557)||(40802235-40802325)
chr8 (469-557)||(37922844-37922937)
chr8 (469-557)||(39655432-39655525)
chr8 (469-509)||(1875703-1875743)
chr8 (469-509)||(9578453-9578493)
chr8 (469-509)||(34194575-34194615)
chr8 (469-509)||(40716761-40716801)
chr8 (469-509)||(41178043-41178083)
chr8 (469-509)||(42631794-42631834)
chr8 (467-509)||(13832021-13832063)
chr8 (891-963)||(24915237-24915311)
chr8 (476-513)||(29110286-29110323)
chr8 (476-509)||(29110348-29110381)
chr8 (469-506)||(32484956-32484993)
chr8 (476-509)||(35972393-35972426)
[»] chr1 (25 HSPs)
chr1 (908-1027)||(34662706-34662830)
chr1 (890-1027)||(43929345-43929488)
chr1 (890-1027)||(47678255-47678398)
chr1 (469-557)||(21909873-21909966)
chr1 (890-1027)||(47844539-47844682)
chr1 (469-557)||(48605102-48605195)
chr1 (445-557)||(50998298-50998412)
chr1 (469-557)||(27549077-27549170)
chr1 (469-506)||(48376893-48376930)
chr1 (469-509)||(3160765-3160805)
chr1 (469-509)||(3606276-3606316)
chr1 (469-509)||(4682952-4682992)
chr1 (469-509)||(12447469-12447509)
chr1 (469-509)||(12993636-12993676)
chr1 (469-509)||(34598947-34598987)
chr1 (469-509)||(37255141-37255181)
chr1 (469-509)||(39181064-39181104)
chr1 (469-509)||(42140415-42140455)
chr1 (476-566)||(28237094-28237189)
chr1 (469-507)||(3160837-3160875)
chr1 (469-507)||(31634479-31634517)
chr1 (469-506)||(15013672-15013709)
chr1 (469-557)||(21852452-21852545)
chr1 (469-506)||(33324133-33324170)
chr1 (446-509)||(39015558-39015618)
[»] scaffold0531 (1 HSPs)
scaffold0531 (447-513)||(7002-7065)
[»] chr3 (19 HSPs)
chr3 (882-1027)||(29457839-29457991)
chr3 (469-567)||(32589330-32589433)
chr3 (890-978)||(5177817-5177908)
chr3 (469-507)||(49562050-49562088)
chr3 (469-514)||(32814708-32814753)
chr3 (472-509)||(34935623-34935660)
chr3 (469-557)||(51760184-51760277)
chr3 (469-506)||(54690526-54690563)
chr3 (469-513)||(7672774-7672818)
chr3 (469-509)||(16894255-16894295)
chr3 (470-514)||(20821457-20821501)
chr3 (469-509)||(24599964-24600004)
chr3 (469-509)||(29076610-29076650)
chr3 (469-509)||(42595822-42595862)
chr3 (469-509)||(43898108-43898148)
chr3 (890-1027)||(33371866-33372009)
chr3 (469-506)||(12569190-12569227)
chr3 (469-506)||(13545654-13545691)
chr3 (469-514)||(23317031-23317076)
[»] chr6 (8 HSPs)
chr6 (893-1027)||(2810087-2810227)
chr6 (897-965)||(1837025-1837095)
chr6 (476-513)||(8029438-8029475)
chr6 (469-557)||(32786131-32786224)
chr6 (469-509)||(13397431-13397471)
chr6 (890-1027)||(8646678-8646821)
chr6 (469-557)||(7418890-7418983)
chr6 (469-557)||(9908168-9908261)
[»] scaffold0013 (1 HSPs)
scaffold0013 (469-583)||(58305-58425)
[»] scaffold0242 (1 HSPs)
scaffold0242 (890-978)||(16512-16603)
[»] scaffold0340 (1 HSPs)
scaffold0340 (470-509)||(14049-14088)
[»] scaffold0236 (1 HSPs)
scaffold0236 (446-509)||(13691-13750)
[»] scaffold0223 (1 HSPs)
scaffold0223 (469-506)||(26665-26702)


Alignment Details
Target: chr2 (Bit Score: 387; Significance: 0; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 357 - 886
Target Start/End: Original strand, 44204120 - 44204661
Alignment:
Q  357 tttatcaagcagtacaatactataaatttannnnnnnaagtttaataaatgggtgtccgaggtttgaatcctaactctata------tatatgtaatact 450  Q
    ||||||||| ||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||      ||||||||||| |    
T  44204120 tttatcaagtagtacaatactataaatttatttttttaagattaataaatgggtgtccgaggtttgaatcctaactctatatatatatatatgtaatatt 44204219  T
Q  451 ccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaa 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||     |||||||||||| |||||||||| ||||||| |    
T  44204220 ccatccgttgctaattagtataagcaaatttgactttttagattttttcaattaatgatgtatatggttcatattatggaccatatatattattaattga 44204319  T
Q  546 ataaacttaaaagttaaatttagttacaattgacaacgaagagagtacaatatatctatcagatgagttaaactcacggagatcgttacattaaaatcac 645  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||| ||||||||||||||| ||| |||||||    
T  44204320 ataaacttaaaagttaaatttagttacaattgacaacgaaggaagtacaatatatctatcaattgagttaaattcacggagatcgttatattcaaatcac 44204419  T
Q  646 atgcttctatatcgttcataatatccaaatcaatcttcatcacatcaattaaaaagattttaagagctagctagctggatttgctttccgattttgtgga 745  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44204420 atgcttctatatcgttcataatatccaaatcaatcttcatcacatcaattaaaaagattttaagagctagctagctggatttgctttccgattttgtgaa 44204519  T
Q  746 taagatgttttacttacaccaattaaataataattaagacgaatgttttcatt-aacttttcaattaatccaccttttcaattgattattaggatccaaa 844  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  44204520 taagatgttttacttacaccaattaaataataattaagacgaatgttttcattaaacttttcaattgat-caccttttcaattgattattaggatccaaa 44204618  T
Q  845 atctgatcccaccacacgagcaac-agtctatcatcagatata 886  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  44204619 atctgatcccaccacacgagcaacaagtctatcatcagatata 44204661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 9 - 329
Target Start/End: Original strand, 44203793 - 44204114
Alignment:
Q  9 gtttgtgactatgctatgattataagagaatcataaggaggtttaaaggactccatcataaataggaatgattgaggtgccctgcctgcctcaaagaaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203793 gtttgtgactatgctatgattataagagaatcataaggaggtttaaaggactccatcataaataggaatgattgaggtgccctgcctgcctcaaagaaaa 44203892  T
Q  109 agacaggtaaattccaactttgaataaattaatcggggaacc-atttatgaaaagatcccttttgtggtgaagttttcaagttgtgtctcaatatgagcg 207  Q
    |||||||||||| |||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44203893 agacaggtaaatcccaactttgaataaattaattggggatcccattcatgaaaagatcccttttgtggtgaagttttcaagttgtgtctcaatatgggcg 44203992  T
Q  208 aacgaaatatttagaaatctctaattaatgcattgattaataccaattaattaattattataaaactcacaaaatggactatatgtggctcttttcaatg 307  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203993 aacgaaatgttaagaaatctctaattaatgcattgattaataccaattaattaattattataaaactcacaaaatggactatatgtggctcttttcaatg 44204092  T
Q  308 catgaactaatctcttatttgg 329  Q
    ||||||||||||||||||||||    
T  44204093 catgaactaatctcttatttgg 44204114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45034403 - 45034546
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga- 984  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| || |||||||||||| |||||||||||||||  |||||||||||| ||||||     
T  45034403 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaaatagaccaaatacatcaactattcaatgaa 45034502  T
Q  985 tcaaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    ||||||| |||| |  ||||||||||||| ||||||||||||||    
T  45034503 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45034546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45571035 - 45571178
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45571035 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45571134  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45571135 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45571178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45574702 - 45574845
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45574702 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45574801  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45574802 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45578369 - 45578512
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45578369 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45578468  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45578469 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45582036 - 45582179
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45582036 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45582135  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45582136 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45582179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45585703 - 45585846
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45585703 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45585802  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45585803 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45585846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45589370 - 45589513
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45589370 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45589469  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45589470 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45589513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45593037 - 45593180
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45593037 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45593136  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45593137 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45593180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45596704 - 45596847
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45596704 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45596803  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45596804 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45596847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45600371 - 45600514
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45600371 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45600470  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45600471 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45600514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45604038 - 45604181
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45604038 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45604137  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45604138 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45604181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45607705 - 45607848
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45607705 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45607804  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45607805 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45607848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45611372 - 45611515
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45611372 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45611471  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45611472 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45611515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 45615039 - 45615182
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  45615039 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45615138  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  45615139 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 45615182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 891 - 1027
Target Start/End: Complemental strand, 4044716 - 4044574
Alignment:
Q  891 tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-at 985  Q
    |||||||||||||||| ||||||||||  |||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| ||    
T  4044716 tccggtcctatttataagaaaaagtaaaatttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaat 4044617  T
Q  986 c-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    | ||||||||| |  ||||||||||||| || || ||||||||    
T  4044616 caaaaaagtaaattgtttcttatatataggatcgaagggagta 4044574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 898 - 1027
Target Start/End: Original strand, 4063285 - 4063420
Alignment:
Q  898 ctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga-tcaaaaa- 991  Q
    ||||||||| |||||||| |  |||||||||||||||| || ||||||||||||  |||||||||||| |  |||||||||||| |||||| |||||||     
T  4063285 ctatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaaatagacaaaatacatcaactattcaatgaatcaaaaaa 4063384  T
Q  992 gtaattgttttcttatatataagaccggagggagta 1027  Q
    |||| |  ||||||||||||| ||||||||||||||    
T  4063385 gtaaattgtttcttatatataggaccggagggagta 4063420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 3838560 - 3838417
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattc-atagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||| ||||||||| |||||||| | |||||||||||||||| ||  ||||||||| | | ||||||||||||| | ||||||||||| |||||| |    
T  3838560 ctccggttctatttataagaaaaagttaactttttagattcattcaatgattgatgtacttcgtctagaaatagaccaaatacatcaactattcaatgaa 3838461  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||| ||||| ||||    
T  3838460 tcaaaaaagtaaattgtttcttatatataggactggaggaagta 3838417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 27327955 - 27327862
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||||| ||||||| || ||||||||||||||     | ||||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  27327955 tataagcaaatttgattttttaggttcattcaattaatgatgtatctgattcatattatggaccacatacatcattaattgaatgaacctaaaa 27327862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 32473486 - 32473579
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||     |||||| ||| | ||| |||||||||||||||||  |||||||||    
T  32473486 tataagcaaattttattttttagattcattcaattaatgatgtatgtggttcataatatagaccacatatatcattaattaaaagaacttaaaa 32473579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 38721508 - 38721415
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||||||| ||||||||||| ||| ||||||||||| |||||     |||||||||| | ||| ||| |||||||||| ||||||| |||||    
T  38721508 tataagcaaaattgactttttaaattcattcaattaataatttatgtggttcatattatagaccacatacatcattaattgaataaacctaaaa 38721415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 40739617 - 40739524
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||||| ||||||| || |||||||||||||| ||     |||||||||||| ||| |||||||||||||| ||| ||| |||||    
T  40739617 tataagtaaatttgattttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatatatcattaattgaatgaacctaaaa 40739524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 33150090 - 33150130
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  33150090 tataagcaaattttactttttaggtttattcaattaatgat 33150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 548
Target Start/End: Complemental strand, 37486124 - 37486040
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaata 548  Q
    ||||||||||||| ||||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||||    
T  37486124 tataagcaaattttactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaata 37486040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 42955158 - 42955118
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  42955158 tataagcaattttgacattttagatttattcaattaatgat 42955118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 15178148 - 15178086
Alignment:
Q  447 tactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||| ||||||  ||| |||||||||||||||| |  ||||| ||||||||||||||||||    
T  15178148 tactccctccgtttttaaatagtataagcaaattttaacttttaaatttattcaattaatgat 15178086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 445 - 509
Target Start/End: Complemental strand, 36490625 - 36490564
Alignment:
Q  445 aatactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||| |||| ||   ||||||||||| ||||||||| || ||||||||||||||    
T  36490625 aatactccatccgtttctaaata---taagcaaattttactttttaggttcattcaattaatgat 36490564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 446 - 506
Target Start/End: Original strand, 38532442 - 38532499
Alignment:
Q  446 atactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaat 506  Q
    |||||||||||||| |||||||   |||||||| || |||||||||||| |||||||||||    
T  38532442 atactccatccgttactaatta---taagcaaaattaactttttagattgattcaattaat 38532499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Original strand, 20128759 - 20128796
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  20128759 tataatcaaattttactttttagatttattcaattaat 20128796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 20195304 - 20195397
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||| |||||||||||| ||||||||||||||     | ||||||| ||||| ||| ||| |||||||||| ||| ||| |||||    
T  20195304 tataagtaaattttactttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatgaacctaaaa 20195397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 32070476 - 32070569
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||||| ||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  32070476 tataagtaaatttgattttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 32070569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 510
Target Start/End: Original strand, 34240839 - 34240880
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgatt 510  Q
    |||||||||||||||| |||||| || |||||||||||||||    
T  34240839 tataagcaaatttgacattttaggttcattcaattaatgatt 34240880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 42579144 - 42579051
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||| |||||||||||| |||||||||||||| ||     |||||| ||||| | | ||| |||||||||||||| || ||||||    
T  42579144 tataagtaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggactacatacatcattaattaaatgaatttaaaa 42579051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 2e-27; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 29031179 - 29031036
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattcat-agttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga- 984  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||  | ||||||||||||||||||||||||||||  |||||||||||| ||||||     
T  29031179 ctccggtcctatttataagaaaaagttaactttttagattcattcaacaattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 29031080  T
Q  985 tcaaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    ||||||| |||| |  ||||||||||||||||||||||||||||    
T  29031079 tcaaaaaagtaaattgtttcttatatataagaccggagggagta 29031036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 880 - 1027
Target Start/End: Complemental strand, 22731412 - 22731258
Alignment:
Q  880 agatatactac-tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaac 975  Q
    ||||||||||| |||||||||||||||| |||||||| |  |||||||||||||| | || || |||||||||||||||||||||||||  |||||||||    
T  22731412 agatatactacctccggtcctatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaaatagaccaaatacatcaac 22731313  T
Q  976 tat-caatga-tcaaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    ||| |||||| ||||||| |||| |  ||||||||||||| ||||||||||||||    
T  22731312 tattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 22731258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 1015298 - 1015155
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga- 984  Q
    ||||||| ||||||||| |||||||| | ||||||||||||||||| || | |||||||||| | |||||||||||||  |||||||||||| ||||||     
T  1015298 ctccggttctatttataagaaaaagttaactttttagattcattcaataatcgatgtacctaacttagaaatagaccaaatacatcaactattcaatgaa 1015199  T
Q  985 tcaaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    ||||||| |||| |  ||||||||||||| ||||||||||||||    
T  1015198 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 1015155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 15968316 - 15968459
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| |  |||||||||||||||| || || ||||| |||||||||||||||||| | ||||||||||| |||||| |    
T  15968316 ctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaaatagaccaaatacatcaactattcaatgaa 15968415  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| |||| |||||||||    
T  15968416 tcaaaaaagtaaattgtttcttatatataggacctgagggagta 15968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 27488352 - 27488495
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | |  |||||||||||||||| || |||||||| |||||||||||||||||| | || |||||||| | |||| |    
T  27488352 ctccggtcctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaaatagaccaaatatatcaactattgaatgaa 27488451  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| |||||||| |||||    
T  27488452 tcaaaaaagtaaattgtttcttatatataggaccggagagagta 27488495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 27990501 - 27990442
Alignment:
Q  447 tactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||||||||||||||   ||||||||||| ||||||||| || ||||||||||||||    
T  27990501 tactccatccgttgctaatta---taagcaaatttcactttttaggttcattcaattaatgat 27990442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 473 - 557
Target Start/End: Original strand, 6638283 - 6638372
Alignment:
Q  473 agcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||| ||||||||| || |||||||||||||| ||     |||||||||| | ||| |||||||||||||| ||| |||||||||    
T  6638283 agcaaattttactttttaggttcattcaattaatgatgtatacggttcatattattgaccacatatatcattaattgaatgaacttaaaa 6638372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 20361992 - 20362032
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  20361992 tataagcaaattttactttttagattcattcaattaatgat 20362032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 23117603 - 23117563
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  23117603 tataagcaaaattgactttttagatttattcagttaatgat 23117563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 24433550 - 24433590
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  24433550 tataagcaaattttactttttagatttattgaattaatgat 24433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 29807093 - 29807133
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  29807093 tataagcaaattttactttttagattcattcaattaatgat 29807133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 39126139 - 39126099
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  39126139 tataagcaaattttactttttagattcattcaattaatgat 39126099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 39603029 - 39602989
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  39603029 tataagcaaattttactttttaggtttattcaattaatgat 39602989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 470 - 557
Target Start/End: Original strand, 40208493 - 40208585
Alignment:
Q  470 ataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||||||||| ||||||||  || ||||||||||||||     | |||||||||||   ||| |||||||||||||| |||||||||||||    
T  40208493 ataagcaaattttactttttaagttcattcaattaatgatatatgtgattcatattataaaccacatatatcattaattgaataaacttaaaa 40208585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 25257196 - 25257159
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  25257196 tataagtaaatttgactttttagattcattcaattaat 25257159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 25320986 - 25320949
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  25320986 tataagtaaatttgactttttagattcattcaattaat 25320949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 29807201 - 29807164
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  29807201 tataagcaaattttactttttagattcattcaattaat 29807164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 34186370 - 34186463
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||  ||||||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  34186370 tataagcaaaaatgactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 34186463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 2e-27; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 47866041 - 47866184
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  47866041 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 47866140  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  47866141 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 47866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 890 - 1020
Target Start/End: Complemental strand, 20459383 - 20459247
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  20459383 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 20459284  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccgga 1020  Q
    || ||||||||| |  ||||||||||||| |||||||    
T  20459283 tcaaaaaagtaaattgtttcttatatataggaccgga 20459247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 890 - 1024
Target Start/End: Original strand, 43020761 - 43020901
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| || |||||||||||| |||||||||||||| | ||||||||||| |||||| |    
T  43020761 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaaatagaccaaatacatcaactattcaatgaa 43020860  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggaggga 1024  Q
    || ||||||||| |  ||||||||||||| |||||||||||    
T  43020861 tcaaaaaagtaaattgtttcttatatataggaccggaggga 43020901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 891 - 1027
Target Start/End: Complemental strand, 20745473 - 20745331
Alignment:
Q  891 tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaataga-ccactacatcaacta-tcaatg-at 985  Q
    |||||||||||||||| |||||||| |  |||||||||||||||| || ||||||||||||||||||||||||| | | ||||||||||| |||||| ||    
T  20745473 tccggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacatcaactattcaatgaat 20745374  T
Q  986 c-aaaaagt-aattgttttcttatatataagaccggagggagta 1027  Q
    | ||||||| ||||||||| ||||||||| ||||||||||||||    
T  20745373 caaaaaagtaaattgtttt-ttatatataggaccggagggagta 20745331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 42804261 - 42804404
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattc-atagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| ||| ||||||||||||   |||||||||||| | ||||||||||| | |||| |    
T  42804261 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatttagaaatagaccaaatacatcaactatttaatgaa 42804360  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||| ||| |  ||||||||||||| ||||||||||||||    
T  42804361 tcaaaaaaataaattgtttcttatatataggaccggagggagta 42804404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 1027
Target Start/End: Original strand, 27841843 - 27841979
Alignment:
Q  896 tcctatttatagaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatgatcaaaaag 992  Q
    ||||||||||| ||||||| |  |||||||||||||||| || || |||||||||||||||||||||| ||  |||||||||||| |||||| ||||||     
T  27841843 tcctatttataaaaaaagttaattttttagattcattcaataattaatgtacctagcctagaaatagatcaaatacatcaactattcaatgaacaaaaaa 27841942  T
Q  993 --taattgttttcttatatataagaccggagggagta 1027  Q
      ||| |  ||||||||||||||||||  ||||||||    
T  27841943 aataaattgtttcttatatataagaccaaagggagta 27841979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 893 - 1027
Target Start/End: Original strand, 3043800 - 3043940
Alignment:
Q  893 cggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga-tca 987  Q
    |||||||||||||| |||||||| |  |||||||||||||||| || ||||||||||||| ||| ||||||||||  |||||||||||| |||||| |||    
T  3043800 cggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtctaaaaatagaccaaatacatcaactattcaatgaatca 3043899  T
Q  988 aaaag-taattgttttcttatatataagaccggagggagta 1027  Q
    ||||  ||| |  |||||||||||||  |||||||||||||    
T  3043900 aaaaaataaattgtttcttatatatagaaccggagggagta 3043940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 11583832 - 11583753
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaatt 543  Q
    |||||||||||||||||||||||||| |||||||||||||| ||     |||||||||||| ||| ||| ||||||||||    
T  11583832 tataagcaaatttgactttttagattcattcaattaatgatgtatgtagttcatattatggaccacatacatcattaatt 11583753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 890 - 978
Target Start/End: Original strand, 20956895 - 20956986
Alignment:
Q  890 ctccggtcctatttatagaaaaa-gtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaactat 978  Q
    ||||||||||||||||| ||||| || |  |||||||||||||||| || |||||||| |||||||||||||||||| | ||||||||||||    
T  20956895 ctccggtcctatttataaaaaaatgttaattttttagattcattcaataattgatgtagctagcctagaaatagaccaaatacatcaactat 20956986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 16391300 - 16391207
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| ||||||||||||||||||||||| |||||||| | ||     |||||||||||| ||| ||| |||||||||| ||||||| |||||    
T  16391300 tataagtaaatttgactttttagatttattaaattaatgttgtatatagttcatattatggaccacatacatcattaattgaataaacgtaaaa 16391207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 26206609 - 26206702
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||     |||||| ||||| ||| ||| |||||||||||||| ||| |||||    
T  26206609 tataagtaaattttactttttagatttattcaattaatgatatatgtggttcataatatggaccacatacatcattaattaaatgaacctaaaa 26206702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 30162736 - 30162643
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||||||||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| |||||||||    
T  30162736 tataagtaaatttgactttttaggttcattcaattaatgatatatgtggttcatattatggaccacatacatcattaattgaatgaacttaaaa 30162643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 44639871 - 44639778
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  44639871 tataagcaaatttcactttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 44639778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 469 - 555
Target Start/End: Complemental strand, 48042716 - 48042625
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaa 555  Q
    ||||||||||||| ||||||||| || |||||||||||||| ||     |||||||||| | ||| ||| |||||||||||||| |||||||    
T  48042716 tataagcaaatttcactttttaggttcattcaattaatgatgtatgtagttcatattatagaccacatacatcattaattaaatgaacttaa 48042625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 39294298 - 39294205
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| ||||||||  || |||||||||||||| ||     |||||||||||| ||| |||||||||||||| ||| ||| |||||    
T  39294298 tataagcaaatttaactttttaagttcattcaattaatgatgtatgcagttcatattatggaccacatatatcattaattgaatgaacctaaaa 39294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 17659590 - 17659550
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  17659590 tataagcaaattttactttttagattcattcaattaatgat 17659550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 39754114 - 39754154
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  39754114 tataagcaaattttactttttaggtttattcaattaatgat 39754154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 50038465 - 50038505
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  50038465 tataagcaaattttactttttagattcattcaattaatgat 50038505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 50045687 - 50045727
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  50045687 tataagcaaattttactttttagattcattcaattaatgat 50045727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 50519387 - 50519347
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  50519387 tataagcaaatttgactttttaggttcattcaattaatgat 50519347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 45070850 - 45070932
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaat 547  Q
    |||||||||| || |||||| ||||||||| ||||||||||     ||||||||||||||| ||| ||| ||||||||||||||    
T  45070850 tataagcaaaattaactttt-agatttatttaattaatgatgtatgttattcatattatggaccacatacatcattaattaaat 45070932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 506
Target Start/End: Complemental strand, 55131682 - 55131624
Alignment:
Q  445 aatactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaat 506  Q
    |||||||||||||||| ||||||   ||||||||||| ||||||||| || |||||||||||    
T  55131682 aatactccatccgttgttaatta---taagcaaatttaactttttaggttcattcaattaat 55131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 55190809 - 55190666
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaactat-caatg-a 984  Q
    ||||||||||||||||| |||||| |    |||||| ||||||||| || |||||||| |||||||||||||||||| | |||||||| ||| || || |    
T  55190809 ctccggtcctatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaaatagaccaaatacatcaattatccactgaa 55190710  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| |||| |||||||||    
T  55190709 tcaaaaaagtaaattgtttcttatatataggaccagagggagta 55190666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 507
Target Start/End: Complemental strand, 16391799 - 16391761
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatg 507  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  16391799 tataagtaaatttgactttttaggtttattcaattaatg 16391761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 4711421 - 4711514
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgatttat-----tcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||| |||| |||| ||||||  || ||||||||||||||||||     ||||||||||| ||| |||  ||||||||||||| |||||||||    
T  4711421 tataaacaaaattgattttttatgttcattcaattaatgatttatgtggttcatattatggaccacatacttcattaattaaatgaacttaaaa 4711514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 41789046 - 41788953
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||||| ||||||  ||||||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  41789046 tataagtaaatttgattttttaagtttattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 41788953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 45890937 - 45891030
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| |||||||| ||||||| ||||||||||     | |||||||||| |  ||| ||| |||||||||||||| || ||||||    
T  45890937 tataagcaaattttactttttatatttattgaattaatgatgtatgtgattcatattacgaaccacatacatcattaattaaatgaagttaaaa 45891030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 46996599 - 46996506
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||| ||||||| ||||||||| || ||| |||||||||||||     |||||| ||||  ||| ||| |||||||||||||||||| |||||    
T  46996599 tataaacaaattttactttttaggttcatttaattaatgatttatgtagttcataatatgaaccacatacatcattaattaaataaacctaaaa 46996506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 53019281 - 53019221
Alignment:
Q  446 atactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||  || ||||||||||||||    
T  53019281 atactccctccgttgctaatta---taagcaaatttaactttttaagttcattcaattaatgat 53019221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 5e-25; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 27231976 - 27231833
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||| |    
T  27231976 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 27231877  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  |||||||| |||| ||||||||||||||    
T  27231876 tcaaaaaagtaaattgtttcttatgtataggaccggagggagta 27231833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 882 - 1027
Target Start/End: Original strand, 4826758 - 4826910
Alignment:
Q  882 atatactac-tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaacta 977  Q
    ||||||||| ||| |||||||||||| |||||||| | ||||||||||||||||| || ||||||||| ||||||||||||||||||  |||||||||||    
T  4826758 atatactacctccagtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaaatagaccaaatacatcaacta 4826857  T
Q  978 t-caatga-tcaaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    | |||||| ||||||| |||| |  ||||||||||||| ||||||||||||||    
T  4826858 ttcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 4826910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 32811520 - 32811377
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| |  |||||||||||||||| || ||||||||||||||||||||||||||| | |||||||| || |||||| |    
T  32811520 ctccggtcctatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaaatagaccaaatacatcaattattcaatgaa 32811421  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| || |||||||||||    
T  32811420 tcaaaaaagtaaattgtttcttatatataggatcggagggagta 32811377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 882 - 1022
Target Start/End: Complemental strand, 1366746 - 1366599
Alignment:
Q  882 atatactac-tccggtcctatttat-agaaaaagtaacctttttagattcattc-atagttgatgtacctagcctagaaatagacc-actacatcaacta 977  Q
    ||||||||| ||||||| ||||||| ||||||||| | |||||||||||||||| ||| |||||||||||||   ||||||||||| | |||||||||||    
T  1366746 atatactacctccggtcttatttatcagaaaaagttaactttttagattcattcaataattgatgtacctagttcagaaatagaccaaatacatcaacta 1366647  T
Q  978 -tcaatg-atc-aaaaagtaattgttttcttatatataagaccggagg 1022  Q
     |||||| ||| ||||||||| |  ||||||||||||| |||||||||    
T  1366646 ttcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 1366599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 890 - 1012
Target Start/End: Original strand, 31227498 - 31227626
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    |||||||| |||||||| |||||||| |  |||||||||||||||| |||||||||||  ||||||||||||||||| | ||||||||||| |||||| |    
T  31227498 ctccggtcttatttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaaatagaccaaatacatcaactattcaatgaa 31227597  T
Q  985 tc-aaaaagtaattgttttcttatatata 1012  Q
    || ||||||||| |  |||||||||||||    
T  31227598 tcaaaaaagtaaattgtttcttatatata 31227626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 11032318 - 11032411
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||||||||||||||||||| ||| |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  11032318 tataagcaaatttgactttttatattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 11032411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 3498309 - 3498349
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  3498309 tataagcaaattttactttttagattcattcaattaatgat 3498349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 25099551 - 25099591
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  25099551 tataagcaaaattgactttttagatttattcatttaatgat 25099591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 27235002 - 27234943
Alignment:
Q  447 tactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||| ||||||||||||||   |||| |||||||||||||||| || ||||||||||||||    
T  27235002 tactccctccgttgctaatta---taagtaaatttgactttttaggttcattcaattaatgat 27234943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 45833315 - 45833275
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  45833315 tataagcaaattttactttttagattcattcaattaatgat 45833275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 46658857 - 46658817
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  46658857 tataagcaaattttactttttagattcattcaattaatgat 46658817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 509
Target Start/End: Complemental strand, 9140276 - 9140233
Alignment:
Q  466 tagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  9140276 tagtataagcaaaattgactttttagattcattcatttaatgat 9140233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 509
Target Start/End: Original strand, 27942341 - 27942380
Alignment:
Q  470 ataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  27942341 ataagcaaattttactttttagattcattcaattaatgat 27942380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 42457093 - 42456994
Alignment:
Q  918 ctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-atc-aaaaagtaattgttttcttatatata 1012  Q
    ||||||||||| ||||| || |||||||||||||| |||||||||||| | ||||||||||| |||||| ||| ||||||||| |  |||||||||||||    
T  42457093 ctttttagatttattcaataattgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaatcaaaaaagtaaatcgtttcttatatata 42456994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 471 - 509
Target Start/End: Original strand, 46578282 - 46578320
Alignment:
Q  471 taagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  46578282 taagcaaatttgactttttaaattcattcaattaatgat 46578320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 566
Target Start/End: Original strand, 7344922 - 7345016
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgatttattcatattatggcccatatatatcattaattaaat-aaacttaaaagttaaattt 566  Q
    ||||||||||||| ||||||||| || |||||||||||||| |    ||| ||||| ||| ||| |||||||||| ||| ||||| |||||| ||||||    
T  7344922 tataagcaaatttaactttttaggttgattcaattaatgatgt----ataatatggaccacatacatcattaattgaatgaaactaaaaagtaaaattt 7345016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 476 - 509
Target Start/End: Complemental strand, 27042218 - 27042185
Alignment:
Q  476 aaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||||||| ||||||||||||||    
T  27042218 aaatttgactttttagattcattcaattaatgat 27042185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 31365690 - 31365653
Alignment:
Q  472 aagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  31365690 aagcaaattttactttctagatttattcaattaatgat 31365653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 33471505 - 33471598
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||     |||||||||| | ||| ||| |||||||||| ||| ||| |||||    
T  33471505 tataagcaaattttattttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacctaaaa 33471598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 35160744 - 35160804
Alignment:
Q  446 atactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||||||| |||| ||   |||||||| |||||||||||| || ||||||||||||||    
T  35160744 atactccatccgtttctaaata---taagcaaaattgactttttaggttcattcaattaatgat 35160804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 48590710 - 48590617
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||||||||||||  || ||||||||||||||     | ||||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  48590710 tataagtaaatttgactttttaagttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattaatttaatgaacctaaaa 48590617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 2e-24; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 891 - 1027
Target Start/End: Original strand, 44796348 - 44796490
Alignment:
Q  891 tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga-t 985  Q
    |||||||||||||||| |||||||| | ||||||||||||||||| || ||||||||| ||||||||||||||||||  |||||||||||| |||||| |    
T  44796348 tccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacatagcctagaaatagaccaaatacatcaactattcaatgaat 44796447  T
Q  986 caaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    |||||| |||| |  ||||||||||||| ||||||||||||||    
T  44796448 caaaaaagtaaattgtttcttatatataggaccggagggagta 44796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 36366167 - 36366024
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| |  |||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||| | |||| |    
T  36366167 ctccggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattgaatgaa 36366068  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  36366067 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 36366024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 891 - 1027
Target Start/End: Original strand, 12958782 - 12958924
Alignment:
Q  891 tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga-t 985  Q
    |||| ||||||||||| |||||||| | ||||||||||||||||| || |||||||||||||| |||||||||||||  |||||||||||| |||||| |    
T  12958782 tccgatcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaat 12958881  T
Q  986 caaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    |||||| |||| |  ||||||||||||| ||||||||||||||    
T  12958882 caaaaaagtaaattgtttcttatatataggaccggagggagta 12958924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 22429540 - 22429683
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| |  |||||||||| ||||| || || |||||||||||||||||||||||| | ||||||||||| |||||| |    
T  22429540 ctccggtcctatttataagaaaaagttaattttttagatttattcaataattaatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 22429639  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  22429640 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 22429683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 890 - 1035
Target Start/End: Original strand, 42786369 - 42786519
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga- 984  Q
    |||||||| |||||||| |||||||| | ||||||||||||||||| || ||||||||| |||| |||||||||||||  ||||| |||||| |||| |     
T  42786369 ctccggtcttatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcttagaaatagaccaaatacattaactattcaataaa 42786468  T
Q  985 tcaaaaagtaattgttttcttatatataagaccggagggagtagtaacaaa 1035  Q
    ||||||||||| |  ||||||||||||| ||||||||| ||||||| ||||    
T  42786469 tcaaaaagtaaattgtttcttatatataggaccggaggaagtagtaccaaa 42786519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 881 - 978
Target Start/End: Original strand, 24177967 - 24178068
Alignment:
Q  881 gatatactac-tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaact 976  Q
    |||||||||| |||||||||||||||| |||||||| | ||||||||||||||||| || |||||||||||||| |||||||||||| | ||||||||||    
T  24177967 gatatactacctccggtcctatttataagaaaaagttaactttttagattcattcaatatttgatgtacctagcttagaaatagaccaaatacatcaact 24178066  T
Q  977 at 978  Q
    ||    
T  24178067 at 24178068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 6899425 - 6899568
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga- 984  Q
    ||||||||||||||||| |||||| | | ||||| ||||||||||| || |||||||||||| |||||||||||| ||  |||||||||||| ||||||     
T  6899425 ctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatacatcaactattcaatgaa 6899524  T
Q  985 tcaaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    ||||||| |||| |  ||||||||||||| ||||||||||||||    
T  6899525 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 6899568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 35011217 - 35011362
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| |  |||||||||||||||| || || |||||||||||||||||||||||| | ||||||||||| |||||| |    
T  35011217 ctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 35011316  T
Q  985 tc-aaaaagtaattgttttct--tatatataagaccggagggagta 1027  Q
    || ||||||||| |  |||||  |||||||| ||||||||||||||    
T  35011317 tcaaaaaagtaaattgtttcttatatatataggaccggagggagta 35011362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 43483947 - 43484040
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  43483947 tataagcaaatttcactttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 43484040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 44838789 - 44838829
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  44838789 tataagcaaaattgactttttagatttattcaattaatgat 44838829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 476 - 557
Target Start/End: Original strand, 34188340 - 34188426
Alignment:
Q  476 aaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||||||||||||| || ||||||||||||||     ||||||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  34188340 aaatttgactttttaggttcattcaattaatgatgtatgttattcatattatggaccacatacatcattaattgaatgaacctaaaa 34188426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 40802325 - 40802235
Alignment:
Q  472 aagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||||||| ||||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| |||||||||    
T  40802325 aagcaaatttcactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacttaaaa 40802235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 37922937 - 37922844
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| ||||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  37922937 tataagcaaattttactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 37922844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 39655432 - 39655525
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||||||||||||| || |||||||||||||| ||     | |||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  39655432 tataagcaaatttgactttttaggttcattcaattaatgatgtatgtggtccatattatggaccacatacatcattaattgaatgaacataaaa 39655525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 1875703 - 1875743
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  1875703 tataagcaaatttgactttttaggttcattcaattaatgat 1875743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 9578453 - 9578493
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  9578453 tataagcaaattttactttttaggtttattcaattaatgat 9578493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 34194575 - 34194615
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  34194575 tataagcaaattttactttttagattcattcaattaatgat 34194615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 40716761 - 40716801
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  40716761 tataagcaaattttactttttagattcattcaattaatgat 40716801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 41178083 - 41178043
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  41178083 tataaacaaatttgactttttagattcattcaattaatgat 41178043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 42631794 - 42631834
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  42631794 tataagcaaattttactttttagattcattcaattaatgat 42631834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 467 - 509
Target Start/End: Original strand, 13832021 - 13832063
Alignment:
Q  467 agtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  13832021 agtataaacaaatttgacttttttgattcattcaattaatgat 13832063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 891 - 963
Target Start/End: Complemental strand, 24915311 - 24915237
Alignment:
Q  891 tccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagac 963  Q
    |||||||||||||||| |||||| | | ||||||||||||||| | || |||||||| ||||| |||||||||||    
T  24915311 tccggtcctatttatatgaaaaaattaactttttagattcattaaataattgatgtatctagcttagaaatagac 24915237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 476 - 513
Target Start/End: Original strand, 29110286 - 29110323
Alignment:
Q  476 aaatttgactttttagatttattcaattaatgatttat 513  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  29110286 aaattttactttttaggtttattcaattaatgatttat 29110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 476 - 509
Target Start/End: Complemental strand, 29110381 - 29110348
Alignment:
Q  476 aaatttgactttttagatttattcaattaatgat 509  Q
    |||||| |||||||||||||||||||||||||||    
T  29110381 aaattttactttttagatttattcaattaatgat 29110348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Original strand, 32484956 - 32484993
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  32484956 tataagcaaattttactttttagattcattcaattaat 32484993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 476 - 509
Target Start/End: Original strand, 35972393 - 35972426
Alignment:
Q  476 aaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||||||| ||||||||||||||    
T  35972393 aaatttgactttttagattcattcaattaatgat 35972426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 3e-23; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 908 - 1027
Target Start/End: Original strand, 34662706 - 34662830
Alignment:
Q  908 aaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga-tcaaaaa-gtaattgtttt 1002  Q
    ||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||| |||| |  |||    
T  34662706 aaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgttt 34662805  T
Q  1003 cttatatataagaccggagggagta 1027  Q
    |||||||||||||||||||||||||    
T  34662806 cttatatataagaccggagggagta 34662830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 43929488 - 43929345
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| || |||||||||||||| |||||||||||| | ||||||||||| | |||| |    
T  43929488 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaaatagaccaaatacatcaactatttaatgaa 43929389  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| ||||||||||||||    
T  43929388 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 43929345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 47678398 - 47678255
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga- 984  Q
    ||||||||||||||||| |||||| | | ||||| ||||||||||| || |||||||||||| |||||||||||| ||  |||||||||||| ||||||     
T  47678398 ctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatacatcaactattcaatgaa 47678299  T
Q  985 tcaaaaa-gtaattgttttcttatatataagaccggagggagta 1027  Q
    ||||||| |||| |  ||||||||||||| ||||||||||||||    
T  47678298 tcaaaaaagtaaattgtttcttatatataggaccggagggagta 47678255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 21909966 - 21909873
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||     |||||| ||||| ||| ||| |||||||||| ||||||| |||||    
T  21909966 tataagcaaattttactttttagatttattcaattaatgatgtatgtagttcataatatggaccacatacatcattaattgaataaacctaaaa 21909873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 47844539 - 47844682
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaataga-ccactacatcaacta-tcaatg-a 984  Q
    ||||||||||||||||| |||||| | | ||||| ||||||||||| || |||||||||||| |||||||||||| | | || |||||||| |||||| |    
T  47844539 ctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatatatcaactattcaatgaa 47844638  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  ||||||||||||| || |||||||||||    
T  47844639 tcaaaaaagtaaattgtttcttatatataggatcggagggagta 47844682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 48605195 - 48605102
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||||||||||||| || ||||||||||||||     | ||||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  48605195 tataagcaaatttgactttttaggttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattaattgaatgaacctaaaa 48605102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 445 - 557
Target Start/End: Original strand, 50998298 - 50998412
Alignment:
Q  445 aatactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcatt 539  Q
    ||||||| ||||||||| |||||   ||||||||||||| ||||||| || |||||||||||||| ||     |||||||||||| | ||||| ||||||    
T  50998298 aatactctatccgttgccaatta---taagcaaatttgattttttaggttcattcaattaatgatgtatttggttcatattatggactatatacatcatt 50998394  T
Q  540 aattaaataaacttaaaa 557  Q
    |||| ||| ||| |||||    
T  50998395 aattgaatgaacctaaaa 50998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 27549170 - 27549077
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| ||||||||| || |||||||||||||| ||     |||||| ||||| ||| ||| |||||||||| ||| |||||||||    
T  27549170 tataagcaaattttactttttaggttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaacttaaaa 27549077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 48376930 - 48376893
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    |||||||||||||||||||||||||| |||||||||||    
T  48376930 tataagcaaatttgactttttagattcattcaattaat 48376893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 3160765 - 3160805
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  3160765 tataagcaaatttgactttttaggttcattcaattaatgat 3160805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 3606276 - 3606316
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  3606276 tataagcaaaattgactttttagattcattcaattaatgat 3606316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 4682952 - 4682992
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  4682952 tataagcaaaattaactttttagatttattcaattaatgat 4682992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 12447469 - 12447509
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  12447469 tataagcaaatttgactttttaggtgtattcaattaatgat 12447509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 12993676 - 12993636
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  12993676 tataagcaaatttgactttttaggttcattcaattaatgat 12993636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 34598987 - 34598947
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  34598987 tataagtaaatttgactttttagattcattcaattaatgat 34598947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 37255141 - 37255181
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  37255141 tataagcaaattttactttttagattcattcaattaatgat 37255181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 39181064 - 39181104
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  39181064 tataagcaaattttactttttagattcattcaattaatgat 39181104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 42140455 - 42140415
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  42140455 tataagcaaaattgactttttaggtttattcaattaatgat 42140415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 566
Target Start/End: Original strand, 28237094 - 28237189
Alignment:
Q  476 aaatttgactttttagatttattcaattaatgatttat-----tcatattatggcccatatatatcattaattaaataaacttaaaagttaaattt 566  Q
    ||||||||||||||||||| |||  ||||||||| |||     ||||||||||| ||| ||| |||||||||| ||| ||| ||||| ||||||||    
T  28237094 aaatttgactttttagattcattttattaatgatgtatgtgggtcatattatggaccacatacatcattaattgaatgaacctaaaaattaaattt 28237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 507
Target Start/End: Complemental strand, 3160875 - 3160837
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatg 507  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  3160875 tataagcaaatttgactttttaggttcattcaattaatg 3160837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 507
Target Start/End: Complemental strand, 31634517 - 31634479
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatg 507  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  31634517 tataagcaaatttgactttttaggttaattcaattaatg 31634479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Original strand, 15013672 - 15013709
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  15013672 tataagtaaatttgactttttagattcattcaattaat 15013709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 21852452 - 21852545
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||||||| |||||||||||| || |||||||||||||| ||     ||||||||||||  || ||| |||||||||| ||| ||| |||||    
T  21852452 tataagcaaaattgactttttaggttcattcaattaatgatatatgtggttcatattatggatcacatacatcattaattgaatgaacctaaaa 21852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 33324170 - 33324133
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  33324170 tataagcaaattttactttttaggtttattcaattaat 33324133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 39015558 - 39015618
Alignment:
Q  446 atactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||| |||||||| |||||   ||| ||||||||||||||||| || ||||||||||||||    
T  39015558 atactccctccgttgccaatta---taaacaaatttgactttttaggttcattcaattaatgat 39015618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 7002 - 7065
Alignment:
Q  447 tactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgatttat 513  Q
    ||||||||||||| |||||||   |||||||||||||||||||||||| ||||||||||||||||||    
T  7002 tactccatccgttactaatta---taagcaaatttgactttttagattcattcaattaatgatttat 7065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 4e-16; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 882 - 1027
Target Start/End: Complemental strand, 29457991 - 29457839
Alignment:
Q  882 atatactac-tccggtcctatttata-gaaaaagtaacctttttagattcattcatag-ttgatgtacctagcctagaaatagacc-actacatcaacta 977  Q
    ||||||||| |||||| ||||||||| |||||||| | |||||||||||||||||  | ||||||||||||| ||||||||||||| | |||||||||||    
T  29457991 atatactacctccggttctatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaaatagaccaaatacatcaacta 29457892  T
Q  978 -tcaatg-atc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
     |||||| ||| ||||||||| |  ||||||||||||| ||| ||||| ||||    
T  29457891 ttcaatgaatcaaaaaagtaaattgtttcttatatataggactggaggaagta 29457839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 469 - 567
Target Start/End: Original strand, 32589330 - 32589433
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaagttaaa 563  Q
    |||||||||||||||||||||||||| |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||  ||||    
T  32589330 tataagcaaatttgactttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaaagtaaa 32589429  T
Q  564 ttta 567  Q
    ||||    
T  32589430 ttta 32589433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 890 - 978
Target Start/End: Complemental strand, 5177908 - 5177817
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaactat 978  Q
    ||||||||||||||||| |||||| | | ||||||||||||||||| || |||||||||||| | |||||||||||| | ||||||||||||    
T  5177908 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctaacttagaaatagaccaaatacatcaactat 5177817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 507
Target Start/End: Original strand, 49562050 - 49562088
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatg 507  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  49562050 tataagcaaattttactttttagatttattcaattaatg 49562088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 514
Target Start/End: Complemental strand, 32814753 - 32814708
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgatttatt 514  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||    
T  32814753 tataagcaaatttgactttttaggttcattcaattaatgatgtatt 32814708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 34935660 - 34935623
Alignment:
Q  472 aagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34935660 aagcaaattttactttttagatttattcaattaatgat 34935623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 51760184 - 51760277
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||| ||||||||||||| || ||||||||||||||     | ||||||||||||  ||| ||| |||||||||||||| ||| |||||    
T  51760184 tataagcaagtttgactttttaggttcattcaattaatgatgtatgtgattcatattatgaaccacatacatcattaattaaatgaacctaaaa 51760277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 54690563 - 54690526
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  54690563 tataagcaaatttgactttttaggtttattcaattaat 54690526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 513
Target Start/End: Complemental strand, 7672818 - 7672774
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgatttat 513  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||    
T  7672818 tataagaaaattttactttttagattcattcaattaatgatttat 7672774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 16894295 - 16894255
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  16894295 tataaacaaaattgactttttagatttattcaattaatgat 16894255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 470 - 514
Target Start/End: Original strand, 20821457 - 20821501
Alignment:
Q  470 ataagcaaatttgactttttagatttattcaattaatgatttatt 514  Q
    |||||||||||||||||||||| || |||||||||||||| ||||    
T  20821457 ataagcaaatttgactttttaggttcattcaattaatgatgtatt 20821501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 24600004 - 24599964
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  24600004 tataagcaaattttactttttaggtttattcaattaatgat 24599964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 29076650 - 29076610
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  29076650 tataagcaaaattgactttttagattcattcaattaatgat 29076610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Complemental strand, 42595862 - 42595822
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  42595862 tataagcaaattttactttttagattcattcaattaatgat 42595822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 43898108 - 43898148
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  43898108 tataagcaaattttactttttagattcattcaattaatgat 43898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 890 - 1027
Target Start/End: Original strand, 33371866 - 33372009
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatga- 984  Q
    ||||| || |||||||| |||||||| |  |||||| ||| ||||| || ||||||||||||||||| ||||||||||  |||||||||||| ||||||     
T  33371866 ctccgatcatatttataagaaaaagttaattttttaaatttattcaataattgatgtacctagcctaaaaatagaccaaatacatcaactattcaatgaa 33371965  T
Q  985 tcaaaaag-taattgttttcttatatataagaccggagggagta 1027  Q
    |||||||  ||| |  ||||||||||||| |||||||| |||||    
T  33371966 tcaaaaaaataaattatttcttatatataggaccggagcgagta 33372009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 12569227 - 12569190
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  12569227 tataagcaaattttactttttagattcattcaattaat 12569190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 13545691 - 13545654
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  13545691 tataagcaaattttactttttagattcattcaattaat 13545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 23317031 - 23317076
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgatttatt 514  Q
    |||||||||||||||||||||| | | |||||||||||||| ||||    
T  23317031 tataagcaaatttgactttttatagtcattcaattaatgatgtatt 23317076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 893 - 1027
Target Start/End: Original strand, 2810087 - 2810227
Alignment:
Q  893 cggtcctatttatagaaaaa-gtaacctttttagattcattca-tagttgatgtacctagcctagaaatagaccac-tacatcaactat-caatgatc-- 986  Q
    |||||||||||||| ||||| || |  |||||||||||||||| || ||||||||||||| |||||||||| |||  |||||||||||| ||||||        
T  2810087 cggtcctatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaaatagtccaaatacatcaactattcaatgaatga 2810186  T
Q  987 aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    ||||||||| |  ||||||||||||| ||||||||||||||    
T  2810187 aaaaagtaaattatttcttatatataggaccggagggagta 2810227  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 897 - 965
Target Start/End: Complemental strand, 1837095 - 1837025
Alignment:
Q  897 cctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacca 965  Q
    |||||||||| |||||||| |  |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  1837095 cctatttataagaaaaagttaattttttagatttattcaataattgatgtacctagcctagaaatagacca 1837025  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 476 - 513
Target Start/End: Complemental strand, 8029475 - 8029438
Alignment:
Q  476 aaatttgactttttagatttattcaattaatgatttat 513  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8029475 aaatttgactttttagattcattcaattaatgatttat 8029438  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 32786131 - 32786224
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| ||||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||||||| ||| ||| |||||    
T  32786131 tataagcaaattttactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaa 32786224  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 13397431 - 13397471
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat 509  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  13397431 tataaacaaatttgattttttagatttattcaattaatgat 13397471  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 890 - 1027
Target Start/End: Complemental strand, 8646821 - 8646678
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaacta-tcaatg-a 984  Q
    ||||| ||||||||||| |||||||| | ||||||||||| ||| | || |||||||||||| | |||||||||||| | | ||||||||| |||||| |    
T  8646821 ctccgatcctatttataagaaaaagttatctttttagatttatttaataattgatgtacctaacttagaaatagaccaaatgcatcaactattcaatgaa 8646722  T
Q  985 tc-aaaaagtaattgttttcttatatataagaccggagggagta 1027  Q
    || ||||||||| |  |||||||||||||  ||||||| |||||    
T  8646721 tcaaaaaagtaaattatttcttatatatagaaccggagcgagta 8646678  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 7418890 - 7418983
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    ||||||||||||| ||||||||| || |||||||||||||| ||     |||||| ||| | ||| ||| |||||||||| ||| |||||||||    
T  7418890 tataagcaaattttactttttaggttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaatttaatgaacttaaaa 7418983  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 9908261 - 9908168
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgat-----ttattcatattatggcccatatatatcattaattaaataaacttaaaa 557  Q
    |||||| |||||||||||||||| || ||||||||||||||     | ||||||||||||| ||| ||| |||||| ||| ||| ||| |||||    
T  9908261 tataagtaaatttgactttttaggttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattgattgaatgaacctaaaa 9908168  T

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Target: scaffold0013 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 469 - 583
Target Start/End: Complemental strand, 58425 - 58305
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaatgattta-----ttcatattatggcccatatatatcattaattaaataaactt-aaaagttaa 562  Q
    ||||||||||||||||||||||| || |||||||||||||| ||     |||||||||||| ||| ||| |||||| ||| ||| ||||| |||||||||    
T  58425 tataagcaaatttgactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattgattgaatgaacttaaaaagttaa 58326  T
Q  563 atttagttacaattgacaacg 583  Q
    ||||  ||| ||||| |||||    
T  58325 atttgcttataattggcaacg 58305  T

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Target: scaffold0242 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 890 - 978
Target Start/End: Original strand, 16512 - 16603
Alignment:
Q  890 ctccggtcctatttata-gaaaaagtaacctttttagattcattca-tagttgatgtacctagcctagaaatagacc-actacatcaactat 978  Q
    |||| |||||||||| | |||||||| |  |||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||||    
T  16512 ctccagtcctatttacaagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactat 16603  T

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Target: scaffold0340 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 509
Target Start/End: Original strand, 14049 - 14088
Alignment:
Q  470 ataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  14049 ataagcaaattttactttttagattcattcaattaatgat 14088  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 13691 - 13750
Alignment:
Q  446 atactccatccgttgctaattagtataagcaaatttgactttttagatttattcaattaatgat 509  Q
    |||||||||||||| |||||    ||||| ||| ||||||||||||||| ||||||||||||||    
T  13691 atactccatccgtttctaat----ataagtaaaattgactttttagattcattcaattaatgat 13750  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 26702 - 26665
Alignment:
Q  469 tataagcaaatttgactttttagatttattcaattaat 506  Q
    ||||||||||||||||||||||| || |||||||||||    
T  26702 tataagcaaatttgactttttaggttcattcaattaat 26665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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