View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5936-Insertion-3 (Length: 1080)

Name: NF5936-Insertion-3
Description: NF5936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5936-Insertion-3
NF5936-Insertion-3
[»] chr3 (39 HSPs)
chr3 (9-922)||(40880632-40881547)
chr3 (9-248)||(40899566-40899805)
chr3 (9-248)||(40904132-40904371)
chr3 (541-717)||(40904373-40904551)
chr3 (540-714)||(40899806-40899982)
chr3 (777-885)||(40900076-40900184)
chr3 (777-889)||(40904610-40904723)
chr3 (289-394)||(37273135-37273240)
chr3 (244-403)||(36646301-36646460)
chr3 (292-403)||(2175816-2175926)
chr3 (308-403)||(41724203-41724299)
chr3 (256-403)||(43115048-43115195)
chr3 (246-388)||(30923820-30923961)
chr3 (289-330)||(25182951-25182992)
chr3 (289-354)||(34707460-34707525)
chr3 (247-356)||(36200135-36200244)
chr3 (289-389)||(1809983-1810083)
chr3 (309-385)||(2152162-2152238)
chr3 (296-399)||(24281044-24281146)
chr3 (248-403)||(27792864-27793019)
chr3 (289-403)||(14548685-14548799)
chr3 (304-402)||(39602189-39602287)
chr3 (290-331)||(21574554-21574595)
chr3 (304-388)||(1217779-1217863)
chr3 (304-362)||(3015822-3015880)
chr3 (289-346)||(11039303-11039360)
chr3 (246-331)||(50015950-50016035)
chr3 (244-325)||(50211805-50211886)
chr3 (307-403)||(22214641-22214737)
chr3 (291-403)||(29113454-29113566)
chr3 (303-403)||(38462273-38462372)
chr3 (288-346)||(30750049-30750105)
chr3 (289-388)||(41452530-41452629)
chr3 (295-346)||(42817192-42817243)
chr3 (292-367)||(47132022-47132097)
chr3 (293-331)||(2606278-2606316)
chr3 (300-386)||(34414759-34414845)
chr3 (244-402)||(45541564-45541722)
chr3 (289-330)||(20194997-20195038)
[»] chr4 (39 HSPs)
chr4 (290-403)||(2996565-2996678)
chr4 (289-356)||(27123316-27123383)
chr4 (243-401)||(55870260-55870417)
chr4 (244-348)||(6428065-6428169)
chr4 (244-403)||(53315318-53315477)
chr4 (250-327)||(18628478-18628555)
chr4 (250-403)||(49219131-49219284)
chr4 (244-395)||(11264301-11264452)
chr4 (296-403)||(45128281-45128388)
chr4 (289-403)||(23819081-23819195)
chr4 (289-403)||(30207535-30207649)
chr4 (245-403)||(44319941-44320099)
chr4 (249-346)||(25583641-25583738)
chr4 (252-409)||(33534096-33534253)
chr4 (289-356)||(1965980-1966046)
chr4 (244-327)||(52428733-52428815)
chr4 (289-327)||(4071946-4071984)
chr4 (289-362)||(4691881-4691954)
chr4 (293-402)||(28300267-28300376)
chr4 (250-346)||(46090738-46090835)
chr4 (289-385)||(1137722-1137818)
chr4 (294-403)||(10192276-10192388)
chr4 (246-346)||(19304975-19305075)
chr4 (294-330)||(31642258-31642294)
chr4 (289-356)||(6987705-6987772)
chr4 (244-331)||(7367973-7368060)
chr4 (244-331)||(7730664-7730750)
chr4 (292-331)||(52419585-52419624)
chr4 (288-346)||(2841675-2841733)
chr4 (247-341)||(10365829-10365923)
chr4 (336-402)||(16494816-16494882)
chr4 (293-331)||(27725278-27725316)
chr4 (290-395)||(46415756-46415862)
chr4 (292-394)||(50742803-50742905)
chr4 (300-329)||(21683504-21683533)
chr4 (289-326)||(25904186-25904223)
chr4 (304-381)||(28614787-28614864)
chr4 (244-329)||(39178185-39178270)
chr4 (308-397)||(46110201-46110290)
[»] chr1 (59 HSPs)
chr1 (243-449)||(7217992-7218199)
chr1 (295-403)||(25005765-25005875)
chr1 (293-403)||(38867799-38867909)
chr1 (290-403)||(25479573-25479686)
chr1 (244-356)||(4868439-4868550)
chr1 (304-403)||(17420195-17420294)
chr1 (321-408)||(27887114-27887201)
chr1 (244-331)||(34536222-34536309)
chr1 (251-346)||(38170616-38170711)
chr1 (246-331)||(4757402-4757487)
chr1 (246-410)||(30257668-30257833)
chr1 (304-395)||(11639395-11639486)
chr1 (289-384)||(32515405-32515500)
chr1 (289-403)||(3224415-3224529)
chr1 (295-357)||(4548759-4548821)
chr1 (308-386)||(4699598-4699676)
chr1 (298-356)||(6262777-6262835)
chr1 (250-356)||(27140517-27140623)
chr1 (309-403)||(29045896-29045990)
chr1 (289-403)||(31517704-31517818)
chr1 (336-398)||(35351036-35351098)
chr1 (292-329)||(5591933-5591970)
chr1 (294-395)||(33185927-33186027)
chr1 (308-401)||(37842338-37842431)
chr1 (293-346)||(42336664-42336717)
chr1 (350-402)||(1432508-1432560)
chr1 (338-402)||(4700079-4700143)
chr1 (295-331)||(8780394-8780430)
chr1 (289-401)||(11695855-11695967)
chr1 (292-344)||(15579533-15579585)
chr1 (294-403)||(28689421-28689532)
chr1 (308-356)||(33108605-33108653)
chr1 (322-402)||(36151502-36151582)
chr1 (303-403)||(39270403-39270503)
chr1 (289-325)||(43371855-43371891)
chr1 (246-330)||(51929383-51929467)
chr1 (289-328)||(4033981-4034020)
chr1 (250-325)||(4200304-4200379)
chr1 (294-357)||(4481968-4482031)
chr1 (295-402)||(6279392-6279499)
chr1 (297-388)||(10744308-10744399)
chr1 (244-403)||(17269242-17269401)
chr1 (290-404)||(35668963-35669075)
chr1 (326-388)||(2522636-2522698)
chr1 (290-399)||(4549506-4549616)
chr1 (299-341)||(45234247-45234289)
chr1 (289-331)||(49692016-49692058)
chr1 (246-327)||(5157140-5157221)
chr1 (244-389)||(12564418-12564563)
chr1 (289-330)||(16980868-16980909)
chr1 (350-403)||(26946472-26946525)
chr1 (296-389)||(27963341-27963434)
chr1 (289-346)||(29929585-29929642)
chr1 (244-273)||(37241740-37241769)
chr1 (295-344)||(37941955-37942004)
chr1 (289-346)||(38001645-38001702)
chr1 (305-362)||(43722308-43722365)
chr1 (290-403)||(44422691-44422804)
chr1 (290-331)||(49521770-49521811)
[»] chr8 (40 HSPs)
chr8 (246-399)||(39551130-39551283)
chr8 (288-403)||(30389091-30389206)
chr8 (289-362)||(8629489-8629562)
chr8 (289-386)||(14949875-14949972)
chr8 (244-410)||(2091746-2091914)
chr8 (249-356)||(6950361-6950468)
chr8 (289-388)||(11569421-11569520)
chr8 (244-388)||(8060676-8060819)
chr8 (244-362)||(9700034-9700152)
chr8 (303-389)||(26473730-26473816)
chr8 (291-396)||(779027-779132)
chr8 (289-330)||(30918177-30918218)
chr8 (244-331)||(26479849-26479936)
chr8 (252-327)||(27412809-27412884)
chr8 (244-331)||(43368619-43368706)
chr8 (291-389)||(7918412-7918510)
chr8 (296-386)||(9540967-9541057)
chr8 (292-362)||(11770978-11771048)
chr8 (289-331)||(30987955-30987997)
chr8 (289-403)||(40071741-40071855)
chr8 (243-396)||(7714241-7714394)
chr8 (289-362)||(31875559-31875632)
chr8 (243-331)||(2487926-2488014)
chr8 (295-403)||(6509273-6509381)
chr8 (289-325)||(7918745-7918781)
chr8 (290-346)||(9572919-9572975)
chr8 (292-400)||(12851171-12851279)
chr8 (292-331)||(30191108-30191147)
chr8 (291-330)||(32840951-32840990)
chr8 (289-331)||(4251020-4251062)
chr8 (244-274)||(25930495-25930525)
chr8 (292-402)||(31862486-31862595)
chr8 (289-331)||(41442417-41442459)
chr8 (245-346)||(4560551-4560652)
chr8 (293-330)||(10120822-10120859)
chr8 (289-326)||(11056630-11056667)
chr8 (244-328)||(22505611-22505693)
chr8 (293-346)||(26371014-26371067)
chr8 (244-325)||(30251373-30251453)
chr8 (304-393)||(35220702-35220791)
[»] chr2 (49 HSPs)
chr2 (303-423)||(9556209-9556331)
chr2 (289-395)||(27699493-27699599)
chr2 (246-400)||(28933819-28933972)
chr2 (294-403)||(30552612-30552722)
chr2 (306-403)||(10285852-10285949)
chr2 (243-331)||(13866942-13867030)
chr2 (244-392)||(15120186-15120334)
chr2 (244-410)||(7103392-7103568)
chr2 (244-403)||(8017426-8017585)
chr2 (289-403)||(22681149-22681263)
chr2 (292-398)||(32821806-32821912)
chr2 (246-331)||(28803451-28803536)
chr2 (294-357)||(1494415-1494478)
chr2 (288-395)||(10567057-10567164)
chr2 (315-410)||(43141856-43141951)
chr2 (289-331)||(1318300-1318342)
chr2 (289-403)||(6993688-6993802)
chr2 (294-356)||(13220472-13220534)
chr2 (243-329)||(22878164-22878250)
chr2 (244-326)||(27317449-27317530)
chr2 (251-385)||(33192212-33192345)
chr2 (289-400)||(33942145-33942258)
chr2 (303-389)||(43065428-43065514)
chr2 (293-391)||(44606078-44606176)
chr2 (289-402)||(14316109-14316222)
chr2 (289-386)||(34652000-34652097)
chr2 (350-402)||(1899934-1899986)
chr2 (304-356)||(9878661-9878713)
chr2 (303-395)||(35810771-35810863)
chr2 (291-362)||(11063521-11063592)
chr2 (289-400)||(12313137-12313248)
chr2 (294-329)||(39622017-39622052)
chr2 (292-331)||(43808622-43808661)
chr2 (293-331)||(4550811-4550849)
chr2 (348-402)||(9477945-9477999)
chr2 (292-354)||(13234547-13234609)
chr2 (244-346)||(19977996-19978098)
chr2 (290-392)||(32106764-32106866)
chr2 (308-402)||(33941902-33941996)
chr2 (246-352)||(43985252-43985358)
chr2 (289-346)||(787381-787438)
chr2 (290-331)||(1741997-1742038)
chr2 (295-388)||(1939302-1939395)
chr2 (290-331)||(7862824-7862865)
chr2 (293-346)||(9478348-9478401)
chr2 (289-362)||(9996771-9996844)
chr2 (297-330)||(12140597-12140630)
chr2 (289-330)||(16451184-16451225)
chr2 (303-388)||(35378994-35379079)
[»] chr7 (49 HSPs)
chr7 (290-403)||(46082026-46082141)
chr7 (252-403)||(34754737-34754887)
chr7 (251-412)||(25670512-25670673)
chr7 (243-356)||(33894666-33894779)
chr7 (289-410)||(48157084-48157205)
chr7 (299-357)||(30496743-30496801)
chr7 (289-403)||(38010706-38010820)
chr7 (244-401)||(28691755-28691911)
chr7 (289-410)||(44151440-44151565)
chr7 (244-331)||(25422390-25422475)
chr7 (289-400)||(33645924-33646035)
chr7 (289-388)||(12242251-12242350)
chr7 (244-331)||(22387815-22387902)
chr7 (243-330)||(23214920-23215007)
chr7 (289-356)||(27626087-27626154)
chr7 (291-362)||(28727729-28727800)
chr7 (308-402)||(3610723-3610817)
chr7 (244-322)||(17942144-17942222)
chr7 (308-393)||(34035919-34036005)
chr7 (289-346)||(36537957-36538014)
chr7 (341-402)||(39907796-39907857)
chr7 (303-400)||(44615082-44615179)
chr7 (244-313)||(47041958-47042027)
chr7 (297-386)||(47427275-47427364)
chr7 (290-386)||(3468623-3468719)
chr7 (294-386)||(5276240-5276332)
chr7 (244-320)||(30748953-30749029)
chr7 (288-356)||(39360062-39360130)
chr7 (296-355)||(6857310-6857369)
chr7 (291-402)||(30535556-30535667)
chr7 (289-356)||(36598320-36598387)
chr7 (291-402)||(39542266-39542377)
chr7 (372-403)||(39711453-39711484)
chr7 (244-326)||(4970711-4970792)
chr7 (308-398)||(9038109-9038198)
chr7 (308-362)||(15740394-15740448)
chr7 (365-403)||(21453286-21453324)
chr7 (325-395)||(24363601-24363671)
chr7 (289-331)||(28340385-28340426)
chr7 (244-346)||(29287276-29287377)
chr7 (247-329)||(31751681-31751763)
chr7 (292-362)||(44808191-44808261)
chr7 (336-402)||(44821952-44822018)
chr7 (351-389)||(47046134-47046172)
chr7 (244-346)||(6977463-6977567)
chr7 (301-370)||(17983769-17983838)
chr7 (350-399)||(20881661-20881710)
chr7 (289-346)||(28844539-28844596)
chr7 (290-331)||(31003004-31003045)
[»] chr6 (48 HSPs)
chr6 (289-356)||(2460115-2460182)
chr6 (287-403)||(4006706-4006822)
chr6 (289-403)||(281812-281926)
chr6 (244-346)||(8348275-8348377)
chr6 (296-382)||(34939526-34939612)
chr6 (291-403)||(8035114-8035226)
chr6 (298-362)||(10616514-10616578)
chr6 (245-368)||(738461-738582)
chr6 (288-346)||(33500443-33500501)
chr6 (244-329)||(32171302-32171387)
chr6 (303-403)||(30523652-30523751)
chr6 (308-400)||(31624085-31624177)
chr6 (296-356)||(32577957-32578017)
chr6 (252-384)||(34939755-34939887)
chr6 (244-331)||(740805-740892)
chr6 (295-362)||(9027611-9027678)
chr6 (292-395)||(20368147-20368250)
chr6 (243-356)||(8420114-8420228)
chr6 (290-400)||(10476087-10476196)
chr6 (244-346)||(30863295-30863397)
chr6 (289-331)||(32917261-32917303)
chr6 (298-403)||(4246402-4246507)
chr6 (304-389)||(7931705-7931790)
chr6 (289-330)||(27857423-27857464)
chr6 (301-337)||(725631-725667)
chr6 (315-403)||(2112192-2112280)
chr6 (243-331)||(2263256-2263344)
chr6 (250-330)||(8146991-8147071)
chr6 (242-346)||(30865532-30865636)
chr6 (290-370)||(33832238-33832318)
chr6 (290-325)||(7485102-7485137)
chr6 (289-356)||(10031771-10031838)
chr6 (303-346)||(20377898-20377941)
chr6 (244-331)||(33737634-33737721)
chr6 (308-362)||(1575928-1575982)
chr6 (365-403)||(2727896-2727934)
chr6 (298-356)||(4080955-4081013)
chr6 (294-388)||(4324423-4324516)
chr6 (298-356)||(5566150-5566208)
chr6 (289-331)||(33116648-33116690)
chr6 (304-404)||(781371-781472)
chr6 (314-387)||(3528811-3528884)
chr6 (289-346)||(5731618-5731675)
chr6 (365-402)||(20671905-20671942)
chr6 (298-331)||(31338040-31338073)
chr6 (297-346)||(31594356-31594405)
chr6 (338-403)||(31671087-31671152)
chr6 (290-331)||(33498683-33498724)
[»] chr5 (44 HSPs)
chr5 (293-402)||(10272399-10272508)
chr5 (294-410)||(4619692-4619808)
chr5 (304-388)||(41957430-41957514)
chr5 (244-331)||(11297115-11297202)
chr5 (289-392)||(37611179-37611282)
chr5 (289-392)||(37787909-37788012)
chr5 (289-403)||(37526163-37526277)
chr5 (289-403)||(37588324-37588438)
chr5 (301-362)||(13604825-13604886)
chr5 (290-403)||(14295498-14295611)
chr5 (244-392)||(12242629-12242777)
chr5 (306-402)||(37794679-37794774)
chr5 (251-331)||(40159882-40159962)
chr5 (244-331)||(12459920-12460007)
chr5 (296-402)||(15246826-15246933)
chr5 (303-346)||(29363057-29363100)
chr5 (289-403)||(37690600-37690715)
chr5 (244-403)||(10391333-10391493)
chr5 (289-402)||(7674641-7674754)
chr5 (292-470)||(35960338-35960516)
chr5 (291-327)||(8090004-8090040)
chr5 (251-331)||(10125644-10125724)
chr5 (289-341)||(10152388-10152440)
chr5 (315-403)||(15003504-15003592)
chr5 (248-356)||(38728441-38728549)
chr5 (244-331)||(499650-499737)
chr5 (291-402)||(2568651-2568762)
chr5 (336-403)||(7319398-7319465)
chr5 (301-396)||(17368675-17368770)
chr5 (289-376)||(28586730-28586817)
chr5 (257-355)||(4273309-4273407)
chr5 (289-331)||(10907442-10907484)
chr5 (255-317)||(12407660-12407722)
chr5 (336-402)||(12425564-12425630)
chr5 (291-345)||(14980559-14980613)
chr5 (290-356)||(29590594-29590660)
chr5 (244-362)||(31208505-31208623)
chr5 (244-282)||(35299878-35299916)
chr5 (293-331)||(38047847-38047885)
chr5 (305-346)||(5531083-5531124)
chr5 (244-341)||(11095414-11095511)
chr5 (256-325)||(13244482-13244551)
chr5 (289-326)||(29336699-29336736)
chr5 (303-356)||(30269711-30269764)
[»] scaffold0459 (1 HSPs)
scaffold0459 (244-330)||(6611-6697)
[»] scaffold0366 (1 HSPs)
scaffold0366 (244-330)||(6609-6695)
[»] scaffold0311 (1 HSPs)
scaffold0311 (289-356)||(10581-10648)
[»] scaffold0608 (1 HSPs)
scaffold0608 (294-357)||(9606-9669)
[»] scaffold0590 (1 HSPs)
scaffold0590 (244-319)||(996-1071)
[»] scaffold0275 (1 HSPs)
scaffold0275 (244-319)||(2904-2979)
[»] scaffold0003 (1 HSPs)
scaffold0003 (290-389)||(306332-306431)
[»] scaffold0024 (1 HSPs)
scaffold0024 (290-356)||(27615-27681)
[»] scaffold0475 (1 HSPs)
scaffold0475 (244-331)||(11480-11568)


Alignment Details
Target: chr3 (Bit Score: 864; Significance: 0; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 864; E-Value: 0
Query Start/End: Original strand, 9 - 922
Target Start/End: Original strand, 40880632 - 40881547
Alignment:
Q  9 aaagcaacatgtgtgatcttcttaggatcaacactgacaggggtgttatgatcaatgacaatcagtcaagattctctattaaaggacagcccattcacca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40880632 aaagcaacatgtgtgatcttcttaggatcaacactgacaggggtgttatgatcaatgacaatcagtcaagattctctattaagggacagcccattcacca 40880731  T
Q  109 tttcgtcggtacatcgacattcagtgaatacactgtggttcatgctggatgtgttgcaaagatcaaccctgatgcgcctcttgacaaagtttgtattctc 208  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  40880732 ttttgtcggtacatcgacattcagtgaatacactgtggttcatgctggatgtgttgcaaagatcaaccctgatgcacctcttgataaagtttgtattctc 40880831  T
Q  209 agctgtggaatatgcacaggtataggagattccaatgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagc 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40880832 agctgtggaatatgcacaggtataggagattccaatgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagc 40880931  T
Q  309 ttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40880932 ttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaa 40881031  T
Q  409 cactgactttatttttatatttcattatggaaatagcttatgagtaagtacttaaatgataagggcttatattgtaaactcttattaattaagctgttta 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881032 cactgactttatttttatatttcattatggaaatagcttatgagtaagtacttaaatgataagggcttatattgtaaactcttattaattaagctgttta 40881131  T
Q  509 tccaagtagtgtataatatatgcttgcattgagatattaatatataactaggttgagtatatgatttcctaattcaatttgcattcatggtcgtaggtct 608  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40881132 tccaagtagtgtataatatatccttgcattgagatattaatatataactaggttgagtatatgatttcctaattcaatttgcattcatggtcttaggtct 40881231  T
Q  609 tggtgctaccatcaatgttgctaaaccgaaacccggttcttctgttgctatctttggacttggagctgttggccttgctgtatgttactttcataccatg 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881232 tggtgctaccatcaatgttgctaaaccgaaacccggttcttctgttgctatctttggacttggagctgttggccttgctgtatgttactttcataccatg 40881331  T
Q  709 agtgtgtgtgtttgtgatactgttatcatatatagcagcaactaaaaagattcaataatacaaatttcaggctgctgaaggagcaaggatatccggtgca 808  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40881332 agtgtgtgtgtttgtgatactgttatcatatatagcagcaactaaaaagattcaataatacaaatttcaggctgctgaaggagcaaggatatctggtgca 40881431  T
Q  809 tcaagaatcattggagtcgttttagtttccagccgtttcgaattaggtaaaatgctttcttattccaccaaatgctttaagctttgagat-accat-aat 906  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  40881432 tcaagaatcattggagtcgatttagtttccagccgtttcgaattaggtaaaatgctttcttattccaccaaatgctttaagctttgagataaccataaat 40881531  T
Q  907 tatgtgacttaatttt 922  Q
     |||||||||||||||    
T  40881532 aatgtgacttaatttt 40881547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 40899566 - 40899805
Alignment:
Q  9 aaagcaacatgtgtgatcttcttaggatcaacactgacaggggtgttatgatcaatgacaatcagtcaagattctctattaaaggacagcccattcacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  40899566 aaagcaacatgtgtgatcttcttaggatcaacactgacaggggtgttatgatcaatgacaaccagtcaagattctctattaagggacagcccattcacca 40899665  T
Q  109 tttcgtcggtacatcgacattcagtgaatacactgtggttcatgctggatgtgttgcaaagatcaaccctgatgcgcctcttgacaaagtttgtattctc 208  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  40899666 tttcgtcggtacatctacattcagcgagtacactgtggttcatgccggatgtgttgcaaagatcaaccctgatgcaccacttgacaaagtttgtattctc 40899765  T
Q  209 agctgtggaatatgcacaggtataggagattccaatgttt 248  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40899766 agctgtggaatatgcacaggtataggagattccaatgttt 40899805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 40904132 - 40904371
Alignment:
Q  9 aaagcaacatgtgtgatcttcttaggatcaacactgacaggggtgttatgatcaatgacaatcagtcaagattctctattaaaggacagcccattcacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  40904132 aaagcaacatgtgtgatcttcttaggatcaacactgacaggggtgttatgatcaatgacaaccagtcaagattctctcttaagggacagcccattcacca 40904231  T
Q  109 tttcgtcggtacatcgacattcagtgaatacactgtggttcatgctggatgtgttgcaaagatcaaccctgatgcgcctcttgacaaagtttgtattctc 208  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||     
T  40904232 tttcgtcggtacatctacattcagcgagtacactgtggttcatgccggatgtgttgcaaagatcaaccctgatgcaccacttgacaaagtttgtattctt 40904331  T
Q  209 agctgtggaatatgcacaggtataggagattccaatgttt 248  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  40904332 agctgtggaatatgcacaggtataggagattccagtgttt 40904371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 541 - 717
Target Start/End: Original strand, 40904373 - 40904551
Alignment:
Q  541 gatattaatatataactaggttgagtatatgatttcctaattcaatttgcattcatggtcgta--ggtcttggtgctaccatcaatgttgctaaaccgaa 638  Q
    |||||||| ||||||||||| ||||| |||| |||| ||||||||||||| | |||  |  ||  |||||||||||||| ||||||||||||||||| ||    
T  40904373 gatattaacatataactaggatgagtctatgttttcgtaattcaatttgcttccatacttctataggtcttggtgctactatcaatgttgctaaaccaaa 40904472  T
Q  639 acccggttcttctgttgctatctttggacttggagctgttggccttgctgtatgttactttcataccatgagtgtgtgt 717  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||||||    
T  40904473 acccggttcttctgtcgctatctttggacttggagctgttggccttgctgtatgttactctcatatcttgtgtgtgtgt 40904551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 540 - 714
Target Start/End: Original strand, 40899806 - 40899982
Alignment:
Q  540 agatattaatatataactaggttgagtatatgatttcctaattcaatttgcattcatggtcgta--ggtcttggtgctaccatcaatgttgctaaaccga 637  Q
    ||||||| |||||||| |||| ||||| |||| ||  |||||||||||||| | |||| |  ||  |||||||||||||| |||||||| |||||||| |    
T  40899806 agatatttatatataattaggctgagtctatgtttctctaattcaatttgcttccatgcttttacaggtcttggtgctactatcaatgtagctaaaccaa 40899905  T
Q  638 aacccggttcttctgttgctatctttggacttggagctgttggccttgctgtatgttactttcataccatgagtgtg 714  Q
    |||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||| | ||||| ||||||||    
T  40899906 aacccggttcatctgttgctatctttggccttggagctgttgggcttgcggtatgttactcttataccttgagtgtg 40899982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 777 - 885
Target Start/End: Original strand, 40900076 - 40900184
Alignment:
Q  777 aggctgctgaaggagcaaggatatccggtgcatcaagaatcattggagtcgttttagtttccagccgtttcgaattaggtaaaatgctttcttattccac 876  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| || |||||||||| | |||||||||||||||     
T  40900076 aggctgctgaaggagccaggatatctggtgcatcaagaatcattggagttgatttagtttccagccgatttgaattaggtacagtgctttcttattccat 40900175  T
Q  877 caaatgctt 885  Q
    |||||||||    
T  40900176 caaatgctt 40900184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 777 - 889
Target Start/End: Original strand, 40904610 - 40904723
Alignment:
Q  777 aggctgctgaaggagcaaggatatccggtgcatcaagaatcattggagtcgttttagtttccagccgtttcgaattaggtaaaatgc-tttcttattcca 875  Q
    ||||||||||||| |||||||| || |||||||||||||||||||| || | ||||||||||||||| || |||||||||| ||||| ||||||||||||    
T  40904610 aggctgctgaaggggcaaggatttctggtgcatcaagaatcattggggttgatttagtttccagccgatttgaattaggtacaatgcttttcttattcca 40904709  T
Q  876 ccaaatgctttaag 889  Q
     |||||||||||||    
T  40904710 tcaaatgctttaag 40904723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 37273240 - 37273135
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||  |||| ||||| | ||||| |||||||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaaca 37273141  T
Q  389 atttat 394  Q
     |||||    
T  37273140 gtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 244 - 403
Target Start/End: Original strand, 36646301 - 36646460
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||| ||||||||||||| |||||||||  ||   ||   || ||||| |||| ||||||||||| |||| ||||||| |||| || |||| |||    
T  36646301 tgtttggatcgacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgt 36646400  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||| | ||||||| |||||  |||||||||||| |||||||||||| ||||| |||||||    
T  36646401 tttcatcttatttctataaactctctaggatagcttatgaaaacaagttataacttatat 36646460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 292 - 403
Target Start/End: Original strand, 2175816 - 2175926
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    ||||| ||||||| || |||||||||||||||||||||||   ||||| |||||| ||||| ||| |||||  |||| ||| ||||||||| ||||||||    
T  2175816 agactatttgagatagtttatgaaaacaacttatgacatgtttgtaagctgttttcaacttgtttctataaactctcaagggtagtttatg-aaacaatt 2175914  T
Q  392 tatagcttatat 403  Q
    ||||||||||||    
T  2175915 tatagcttatat 2175926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 308 - 403
Target Start/End: Complemental strand, 41724299 - 41724203
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt-tataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||| ||||||||||||||||| || ||||||||||| | |||||||| |||||  |||| ||||||| | ||||||||| ||||||||||||||    
T  41724299 cttatggaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagcttatat 41724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 403
Target Start/End: Complemental strand, 43115195 - 43115048
Alignment:
Q  256 cttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatt 355  Q
    ||||| |||| ||||||||||| || | ||   |||||| ||||||  |||| ||||| ||||||||||||||||| || ||| ||||||| | ||||||    
T  43115195 cttatataaggttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatt 43115096  T
Q  356 tttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |  ||||  |||| | ||||||| |||||||||| |||||||||||||    
T  43115095 tccataagctctcaatgatagttcatgaaaacaacttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 388
Target Start/End: Original strand, 30923820 - 30923961
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttt 345  Q
    ||||||||| |||| || ||||||| |||||| || ||||   ||||||||||||  ||||||| ||| ||||| ||||||||||| |  |||| |||||    
T  30923820 tttggattgccttacttgagcttatttattgatataaacacttgtgagactgtttatgagagct-atggaaacagcttatgacatgtctataagctgttt 30923918  T
Q  346 taaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    | | ||||||| |||||  |||||||||||| |||||||||||    
T  30923919 tcagcttatttctataaactctctaggataggttatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 25182951 - 25182992
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25182951 gtgagactgtttgagagagcttatgaaaacaacttatgacat 25182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 34707460 - 34707525
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttat 354  Q
    |||||||||||||||||| ||| |||||||||||| ||||||| || ||||||||||| |||||||    
T  34707460 gtgagactgtttgagagaacttttgaaaacaacttgtgacatgtccataagttgttttcaacttat 34707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 356
Target Start/End: Complemental strand, 36200244 - 36200135
Alignment:
Q  247 ttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||||||||||||| |||||||||| |||||  | ||   |||||| |||| ||||||| || || ||||||||||||||||| || |||||||||||    
T  36200244 ttggattgacttatttgagcttatctaatgaaaacagcacttgtgagaatgttggagagagtttttgtaaacaacttatgacatgtccataagttgtttt 36200145  T
Q  347 aaacttattt 356  Q
     | |||||||    
T  36200144 cagcttattt 36200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 1810083 - 1809983
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||| |||||||||||||| | ||||||||||||||||| || | |||||||||   ||||||| ||||| ||   |||||||| |||||||||||    
T  1810083 gtgagactatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttctataagtttcgtaggatagcttatgaaaaca 1809984  T
Q  389 a 389  Q
    |    
T  1809983 a 1809983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 2152162 - 2152238
Alignment:
Q  309 ttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaa 385  Q
    |||||||||||||||||||||||  |||||| |||||| ||||| ||| |||||  |||| ||||||||||||||||    
T  2152162 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 2152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 296 - 399
Target Start/End: Complemental strand, 24281146 - 24281044
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 395  Q
    |||||||||||||||||||||||||||||||| ||  || ||||||||||| |||||| ||| ||||  |||| | |||||  ||||| |||| ||||||    
T  24281146 tgtttgagagagcttatgaaaacaacttatgatatctccataagttgttttcaacttactttcataagctctccatgatag-ctatgacaacagtttata 24281048  T
Q  396 gctt 399  Q
    ||||    
T  24281047 gctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 403
Target Start/End: Complemental strand, 27793019 - 27792864
Alignment:
Q  248 tggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttta 347  Q
    |||||||  |||||| |||||||||||||| || |||| |||||||||||||||| |||| ||||| ||| | ||| |||||      |||||||||||     
T  27793019 tggattggtttatttgagcttatctattgacataaacacacgtgagactgtttgatagagtttatggaaatagcttttgacaaatttataagttgttttc 27792920  T
Q  348 aacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    | ||||||| |||||  |||  | |||||||||||||||||| ||  |||||||||    
T  27792919 agcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatat 27792864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 14548685 - 14548799
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||||||||||||||||||||||| ||||||||     || | |||||| | |||||||  ||||  |||| || |||  |||||||||||    
T  14548685 gtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatgaaaaca 14548784  T
Q  389 atttatagcttatat 403  Q
    | |||||||||||||    
T  14548785 acttatagcttatat 14548799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 39602189 - 39602287
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||||||||| ||| |||||||||||  | ||| ||||||| |||||||||| |||| ||||| | ||||| |||||||||||  ||||| ||||||    
T  39602189 agagcttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttata 39602287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 21574595 - 21574554
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatg 21574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 1217779 - 1217863
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||| | ||||| ||||||||||| || ||||||||||| | |||| ||| |||| ||||| ||||||| |||||||||||    
T  1217779 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaaca 1217863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 3015822 - 3015880
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    |||||||||||||||||||||||||||| || |||| |||||| | |||||||| ||||    
T  3015822 agagcttatgaaaacaacttatgacatgtccataagatgttttcatcttattttaataa 3015880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 11039303 - 11039360
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||||||||||| |||||||||| |||||  |||||||||| || |||||||||||    
T  11039303 gtgagactgtttgaaagagcttatggaaacatattatgacatgtccataagttgtttt 11039360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 50016035 - 50015950
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||| ||||| | || ||||||||||  || ||||   |||||||||||||||||| |||||||||| ||| |||||||||    
T  50016035 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatg 50015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 50211886 - 50211805
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttat 325  Q
    |||||||||| |||||||| |||||||||| | | || | ||   || ||||||||||||||| ||||||||||||||||||    
T  50211886 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 307 - 403
Target Start/End: Original strand, 22214641 - 22214737
Alignment:
Q  307 gcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||||||||||| ||| | ||||||| || |||| |||||| | |||||||   |||  |||||||||||| |||||||||||| |||||| ||||||    
T  22214641 gcttatgaaaaaaacatttgacatgtccataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaacttataggttatat 22214737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 29113566 - 29113454
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 390  Q
    |||||||||||||||||||||   ||||||||||| ||||| |  |||| | |||| |  ||||||| ||||  | ||||||| || ||||||| | |||    
T  29113566 gagactgtttgagagagcttacagaaacaacttataacatgcctataagctattttcattttattttcataagctttctaggacagcttatgaacaaaat 29113467  T
Q  391 ttatagcttatat 403  Q
    |||||||||||||    
T  29113466 ttatagcttatat 29113454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 303 - 403
Target Start/End: Complemental strand, 38462372 - 38462273
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||||  |||||| ||||||| ||||| ||||||||||| | |||||||  ||||  | ||| |||||| ||||||||||| |||||||| ||||    
T  38462372 gagagcttatacaaacaa-ttatgacttgaccataagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatata 38462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 30750105 - 30750049
Alignment:
Q  288 cgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||| |||||||||||  ||||||||||||||||||||| || |||| ||||||    
T  30750105 cgtgagactatttgagagagc--atgaaaacaacttatgacatgtccataagctgtttt 30750049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 388
Target Start/End: Complemental strand, 41452629 - 41452530
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| | ||||||||| |||||  ||||||||||||| ||| |  |||| |||||| | |||||||  | |||||||| ||||||| |||||||||||    
T  41452629 gtgagagtatttgagagaccttatagaaacaacttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagcttatgaaaaca 41452530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 42817192 - 42817243
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||||||||||| ||||| | ||||||||| || |||||||||||    
T  42817192 ctgtttgagagagcttatggaaacagcatatgacatgtccataagttgtttt 42817243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 47132097 - 47132022
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttct 367  Q
    ||||| ||||||||| ||||||||||||||||||| |||  || |||  |||||| | ||||||||||||| ||||    
T  47132097 agactatttgagagaacttatgaaaacaacttatgtcatatccataaactgttttcagcttatttttataagttct 47132022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 2606278 - 2606316
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  2606278 gactgtttgagagatcttatggaaacaacttatgacatg 2606316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 34414759 - 34414845
Alignment:
Q  300 tgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    |||| ||||||||||||||||  |||| ||||  | ||||||||||| | |||||||| ||||  |||| | |||||||||||||||    
T  34414759 tgagtgagcttatgaaaacaatctatgtcatgcgcataagttgttttcagcttattttcataaactctccatgatagtttatgaaaa 34414845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 402
Target Start/End: Complemental strand, 45541722 - 45541564
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||||||||||| ||||||| || ||  || ||||   || |||||||||   ||| |||||||||||| |||||||||||  | |||| |||    
T  45541722 tgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagctgt 45541623  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||| |  ||||| | |||| || || | ||||| ||||||||| ||  |||||||||||    
T  45541622 tttcaggttattctcataagttatccaagatagcttatgaaaataaactatagcttata 45541564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 20194997 - 20195038
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||||| |||||||||||||||||  |||||||||    
T  20194997 gtgagactgtttgtgagagcttatgaaaacagtttatgacat 20195038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 8e-24; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 2996678 - 2996565
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||| | |||| |||||||||| |||   |||| | ||||| ||||||||||||    
T  2996678 tgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaa 2996579  T
Q  390 tttatagcttatat 403  Q
     ||||| |||||||    
T  2996578 cttataacttatat 2996565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 27123316 - 27123383
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||    
T  27123316 gtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttattt 27123383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 243 - 401
Target Start/End: Original strand, 55870260 - 55870417
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttg 342  Q
    ||||||||||| |||||||| || ||||||| ||| || |||||  |||||||| ||||||| |||||||||||| |  ||||||| || || |||| ||    
T  55870260 atgtttggattaacttatttgagtttatctaatgacataaacatttgtgagactctttgagatagcttatgaaaaaagtttatgacctgtccataagctg 55870359  T
Q  343 ttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttat 401  Q
    ||||||| ||| | ||||||  ||||| |  ||| |||||||||||| |||||||||||    
T  55870360 ttttaaaatta-tattataagctctcttgattagcttatgaaaacaacttatagcttat 55870417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 6428169 - 6428065
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||| |||||||||||| ||||||| |||||  || | ||   ||||||| ||||||||||| ||||||||||||||||||||||| || |||||||     
T  6428169 tgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataagttga 6428070  T
Q  344 tttaa 348  Q
    |||||    
T  6428069 tttaa 6428065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 403
Target Start/End: Complemental strand, 53315477 - 53315318
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||||||||||| |||||||| | ||  || | || |  | ||||| |||| ||||||||||||||||||| ||| ||||| || |||| | |    
T  53315477 tgtttggattgacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaacatatcacatgtccataagctat 53315378  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||| |||||||||| ||||  |||||||| | |||| ||| ||||  |||||||||||||    
T  53315377 ttttaacttattttcataagctctctaggtttgtttttgagaacagcttatagcttatat 53315318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 18628478 - 18628555
Alignment:
Q  250 gattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatga 327  Q
    ||||||| ||||| |||||||||| ||| || ||||   ||||||||||||| |||||||||||||||||||||||||    
T  18628478 gattgacgtatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 403
Target Start/End: Complemental strand, 49219284 - 49219131
Alignment:
Q  250 gattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaa 349  Q
    |||||||||||||||||||| |||||||||| |  |  | | | |||||||  |||| ||||||||||||| | ||  |||  || ||||||||||| |     
T  49219284 gattgacttatttaagcttacctattgaaataattactcataaaactgtttaggagaccttatgaaaacaattaatagcatctccataagttgttttcag 49219185  T
Q  350 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||  ||||  ||| || |||||||||||||||||| |||||||||||||    
T  49219184 cttatttccataatctctttaagatagtttatgaaaacaacttatagcttatat 49219131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 395
Target Start/End: Complemental strand, 11264452 - 11264301
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||| ||||||| ||  |||||| |   || |||||  ||||||||||||| |||||| |||  || |||||||||||||| || |||  |||    
T  11264452 tgtttggattggcttatttgagtctatctactagcataaacatctgtgagactgtttgggagagcatatagaatcaacttatgacatgtccataaactgt 11264353  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 395  Q
    ||| |||||||||  ||||  |||||||||| | |||||||||||| |||||    
T  11264352 tttcaacttatttccataagctctctaggatggcttatgaaaacaacttata 11264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 296 - 403
Target Start/End: Original strand, 45128281 - 45128388
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 395  Q
    |||||||||||||||||| |||||||| ||  |||| || | || |||||| | |||||||  ||||  | | ||||| |||||||||||||||||||||    
T  45128281 tgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttata 45128380  T
Q  396 gcttatat 403  Q
    ||||||||    
T  45128381 gcttatat 45128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 23819195 - 23819081
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||||||||  |||| ||| ||||||| ||||||||||| || ||||||||||| | ||||||| |||||  |||  | ||||| |||||||||||    
T  23819195 gtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaaca 23819096  T
Q  389 atttatagcttatat 403  Q
      ||||| |||||||    
T  23819095 tgttataacttatat 23819081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 30207535 - 30207649
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||| | |||||||||||| | |||| | ||||||||| | ||||| |||||| | |||||||  ||||  |||||| | ||| |||||||||||    
T  30207535 gtgagactgatcgagagagcttataagaacagcatatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaaca 30207634  T
Q  389 atttatagcttatat 403  Q
    | |||||||||||||    
T  30207635 acttatagcttatat 30207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 403
Target Start/End: Complemental strand, 44320099 - 44319941
Alignment:
Q  245 gtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 344  Q
    ||||||||||  |||||| |||||| ||||||  || ||||   ||||||||||||| |||||||||||||||||| ||||||  |  || | || | ||    
T  44320099 gtttggattggtttatttgagcttacctattggcataaacaattgtgagactgtttgggagagcttatgaaaacaaattatgatgtatccattagctatt 44320000  T
Q  345 ttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    || |||| ||||| |||| ||||||||||||| |||| |||| |  || ||||||||||    
T  44319999 ttcaactaattttcataagttctctaggatagcttatcaaaatagcttgtagcttatat 44319941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 346
Target Start/End: Complemental strand, 25583738 - 25583641
Alignment:
Q  249 ggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||| |||||| || ||||||  ||| || |||||  ||||||||||||| ||| ||||||| ||||||||||||||||| ||  ||||||||||    
T  25583738 ggattgatttatttgagtttatcttctgacataaacatgtgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtccaaaagttgtttt 25583641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 409
Target Start/End: Original strand, 33534096 - 33534253
Alignment:
Q  252 ttgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaact 351  Q
    ||||||||||| |||||||||| ||| || |  |   |||||| | ||||||||||||||||||||||| || ||||||  || ||||||||||| | ||    
T  33534096 ttgacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagct 33534195  T
Q  352 tatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaac 409  Q
    |||||| ||||  |||| |  ||| |||| |||||||| || ||| |||||| |||||    
T  33534196 tattttcataagctctcaaaaataatttacgaaaacaacttgtagattatatagaaac 33534253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 1966046 - 1965980
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||||| || |||||||||||||||||||||||||||  | |||| |||||| |||||||||    
T  1966046 gtgagactgttttag-gagcttatgaaaacaacttatgacatgttcataagctgtttttaacttattt 1965980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 52428815 - 52428733
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatga 327  Q
    ||||||||||||||||||| || ||||||| |||||  | |||   ||| ||| ||||||||||||||||||||||||||||||    
T  52428815 tgtttggattgacttatttgagtttatctactgaaaaca-catgtctgaaactatttgagagagcttatgaaaacaacttatga 52428733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 4071984 - 4071946
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatga 327  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  4071984 gtgagactgtttgagagagcttatgaaaacagcttatga 4071946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 4691954 - 4691881
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    |||||||| ||||||| | |||||| ||||||||||||||||| || || |||||||| | |||||||| ||||    
T  4691954 gtgagactatttgagaaaacttatggaaacaacttatgacatgcccatatgttgttttcagcttattttcataa 4691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 28300267 - 28300376
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 392  Q
    ||||| ||||||||  ||||||||||| | |||||||||  | ||||||||||| |||||||||| ||||  |||  | |||||  |||||||| | |||    
T  28300267 gactgattgagagaatttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagttt 28300366  T
Q  393 atagcttata 402  Q
    ||||||||||    
T  28300367 atagcttata 28300376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 46090738 - 46090835
Alignment:
Q  250 gattgacttatttaagcttatctat-tgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||||| | ||||||||  ||| || |||||  |||||||||| ||||| |||||||||||||| |||| ||||||  ||| |||||||||    
T  46090738 gattgacttatttgaacttatctacctgacattaacatttgtgagactgtatgagatagcttatgaaaacagcttaagacatgttcgttagttgtttt 46090835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 289 - 385
Target Start/End: Complemental strand, 1137818 - 1137722
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaa 385  Q
    |||| |||||||  |||| |||||||||||| |||||||||||  | ||||||||||| |  ||||||  ||||  ||||| |||||||||||||||    
T  1137818 gtgacactgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaa 1137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 294 - 403
Target Start/End: Complemental strand, 10192388 - 10192276
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgac----cgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||||||| ||||| |||| ||||||| |||||      ||||||||||||| |||||||||| ||| | |||| ||||||| || |||||||||    
T  10192388 actgtttgagagaacttataaaaataacttataacatgcatgttcgtaagttgttttcaacttattttcatagc-tctccaggatagcttttgaaaacaa 10192290  T
Q  390 tttatagcttatat 403  Q
     ||||| |||||||    
T  10192289 cttataacttatat 10192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 19305075 - 19304975
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttt 345  Q
    ||||||||||||||||| || ||||||||||| || | |||  |||||| ||| || ||||  || || ||||| ||||||||||| || ||||||||||    
T  19305075 tttggattgacttatttgagattatctattgacataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccataagttgttt 19304976  T
Q  346 t 346  Q
    |    
T  19304975 t 19304975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 31642294 - 31642258
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31642294 actgtttgagagaacttatgaaaacaacttatgacat 31642258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 6987705 - 6987772
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    ||||||||||||| ||||||||||| | ||||||||||||||| || |||  | |||| |||||||||    
T  6987705 gtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttattt 6987772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 7367973 - 7368060
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||||||| || |||||||  |  || |||    ||||||||||||| ||||||| ||||||||| |||||||||||    
T  7367973 tgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatg 7368060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 7730750 - 7730664
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||| ||||||||| |||| ||||| ||| || ||||  ||||||||| |||  ||||||||| | |||||||||||||||||    
T  7730750 tgtttggatcgacttatttgagct-atctaatgacataaacacgcgtgagactattttggagagcttaaggaaacaacttatgacatg 7730664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 52419585 - 52419624
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  52419585 agactgtttgagagaccttatgaaaacaacttattacatg 52419624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 2841733 - 2841675
Alignment:
Q  288 cgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||| |||||| ||||| |||||||| |||||||||||||| |  |||||||||||    
T  2841733 cgtgagattgtttgcgagagtttatgaaagcaacttatgacatgtcaataagttgtttt 2841675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 10365923 - 10365829
Alignment:
Q  247 ttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 341  Q
    |||||||||||||||||| |||||||| ||| || ||||   | |||||| ||||||| |||||||  |||||| |||| ||||| || ||||||    
T  10365923 ttggattgacttatttaatcttatctactgacataaacactggagagactatttgagacagcttatcgaaacaaattataacatgtccataagtt 10365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 16494816 - 16494882
Alignment:
Q  336 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||||| |||||| ||||| ||  |||| | ||||| |||||||||||| ||||||||||||    
T  16494816 taagttgttttcaacttagttttacaagctctccaagatagcttatgaaaacaacttatagcttata 16494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 27725316 - 27725278
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  27725316 gactgtttgagagagcttatggaaataacttatgacatg 27725278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 395
Target Start/End: Original strand, 46415756 - 46415862
Alignment:
Q  290 tgagactgttt-gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||| | ||||| ||||| ||||||| ||||||||| || ||||||||||| | || |||||  |||  |||| ||||||| ||||||||| |    
T  46415756 tgagactgttttgggagagtttatgcaaacaacctatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaaga 46415855  T
Q  389 atttata 395  Q
    | |||||    
T  46415856 acttata 46415862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 50742803 - 50742905
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    ||||||||||||||| ||||||||||||  | ||||||||  | ||   |||||| |||| ||||| ||||  |||| ||||||| |||||||||||| |    
T  50742803 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttcaactcattttcataagctctccaggatagcttatgaaaacaagt 50742902  T
Q  392 tat 394  Q
    |||    
T  50742903 tat 50742905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 300 - 329
Target Start/End: Original strand, 21683504 - 21683533
Alignment:
Q  300 tgagagagcttatgaaaacaacttatgaca 329  Q
    ||||||||||||||||||||||||||||||    
T  21683504 tgagagagcttatgaaaacaacttatgaca 21683533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 326
Target Start/End: Original strand, 25904186 - 25904223
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatg 326  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  25904186 gtgagactgtttgggagagcttatgaaaacagcttatg 25904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 28614787 - 28614864
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttat 381  Q
    |||||||||| |||||| |||||||||  || |||| | |||| | |||||||| |||| ||||||||||||| ||||    
T  28614787 agagcttatggaaacaatttatgacatatccataagctcttttcagcttattttcataagttctctaggatagcttat 28614864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 39178185 - 39178270
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgaca 329  Q
    ||||||||||||| ||||||||| |||||| ||| || ||||    ||| |||||||| |||| |||||||||||  |||||||||    
T  39178185 tgtttggattgacgtatttaagcatatctactgacataaacacttttgacactgtttgggagaacttatgaaaaccgcttatgaca 39178270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 46110290 - 46110201
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagc 397  Q
    |||||||||||||||||||| ||   | ||||||||||| | ||||||| |||||  |||| |  |||| ||||||||||| ||||||||    
T  46110290 cttatgaaaacaacttatgatatactcataagttgttttcagcttatttctataagctctcaatcatagcttatgaaaacagtttatagc 46110201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 8e-24; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 243 - 449
Target Start/End: Original strand, 7217992 - 7218199
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttg 342  Q
    |||||||||||||||||||||||||||||||  |  || ||||    ||||| |||||| | |||||| ||||||| |||||||||| |  |  ||| ||    
T  7217992 atgtttggattgacttatttaagcttatctaccggcataaacacttctgagattgtttgggggagcttgtgaaaacgacttatgacacgttcacaagctg 7218091  T
Q  343 ttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaaca--ctgactttatttttatatttcattatggaa 440  Q
    |||| |||||||||| |||| ||||| ||||||| |||||||||||| |||||||||||||  |||||   |||||||| |||||  ||| |||||||||    
T  7218092 ttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgacttta-ttttaccttttattatggaa 7218190  T
Q  441 atagcttat 449  Q
    |||| ||||    
T  7218191 atagattat 7218199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 403
Target Start/End: Original strand, 25005765 - 25005875
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatg--accgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 392  Q
    ||||||| |||||||||||||||||||||||||| |   |  ||||| | |||||| ||| |||||||||  |||| ||||||| |||||||||||| ||    
T  25005765 ctgtttgggagagcttatgaaaacaacttatgactttctatagtaagatattttaagcttgtttttataagctctccaggatagcttatgaaaacaactt 25005864  T
Q  393 atagcttatat 403  Q
    |||||||||||    
T  25005865 atagcttatat 25005875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 293 - 403
Target Start/End: Original strand, 38867799 - 38867909
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 392  Q
    ||||||||||||||||||||| ||| ||||||||| ||| || | ||||||||| | |||||||| |||| ||||  | ||||  ||||||||||| |||    
T  38867799 gactgtttgagagagcttatggaaataacttatgatatgtccatcagttgtttttagcttattttcataagttcttcaagataacttatgaaaacagttt 38867898  T
Q  393 atagcttatat 403  Q
    | |||||||||    
T  38867899 aaagcttatat 38867909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 25479686 - 25479573
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||| |||| | ||||||||||||| |  ||||||||||  | | ||||||||| | |||||||| ||||  |||||||||||| ||||||||||||    
T  25479686 tgagactatttgtgtgagcttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaa 25479587  T
Q  390 tttatagcttatat 403  Q
     ||||||| |||||    
T  25479586 cttatagcctatat 25479573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 4868550 - 4868439
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||||||||| |||||| |  ||||||||||| ||   ||   ||||||||||||||||||| |||||||| |||||||||||||| |  ||||||||    
T  4868550 tgtttggattgatttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttatgaaa-caacttatgacatgtcaataagttgt 4868452  T
Q  344 tttaaacttattt 356  Q
    ||| |||||||||    
T  4868451 tttcaacttattt 4868439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 304 - 403
Target Start/End: Complemental strand, 17420294 - 17420195
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||||||||||||||||| ||||| || ||| ||||||| |||||||||  || | || |||  ||||| ||| ||||||| ||||||||||||||    
T  17420294 agagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaaacagtttatagcttatat 17420195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 408
Target Start/End: Original strand, 27887114 - 27887201
Alignment:
Q  321 cttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaa 408  Q
    ||||||||||| || ||| ||||||| | ||||||||||||   |||| | |||||||||||||||||| ||||||||||||| ||||    
T  27887114 cttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatggaaa 27887201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 34536309 - 34536222
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||| |||||||||| | | |||||||||| || ||||   ||||||||||||||||  ||||||||||||| |||||||||||    
T  34536309 tgtttggaatgacttatttgaacgtatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatg 34536222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 38170616 - 38170711
Alignment:
Q  251 attgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||||||||||| ||||| || ||  |||||||   ||||||||| ||| ||||||||||||||||| |||||||||||  | |||||||||||    
T  38170616 attgacttatttaaccttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgtttt 38170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 4757487 - 4757402
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||| ||||||||||| |||||||||||||| || ||||   |||||||  ||||  ||| ||||||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaacttatgacatg 4757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 410
Target Start/End: Complemental strand, 30257833 - 30257668
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatac-gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 344  Q
    |||||||| |||||||| || ||||||| ||| || |||||   |||||||| |||  |||||||||| ||||    ||||||||||  | |||| ||||    
T  30257833 tttggatttacttatttgagtttatctactgacataaacattttgtgagactatttaggagagcttataaaaatcttttatgacatgttcataagctgtt 30257734  T
Q  345 ttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaaca 410  Q
    || | ||||||| |||||   ||| |||||||||||||||||||| ||| ||||||||| ||||||    
T  30257733 ttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaaca 30257668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 395
Target Start/End: Original strand, 11639395 - 11639486
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 395  Q
    |||||||||||||||| ||||||||||| || |||| |||||| | |||||||| ||||  ||||||| |||  ||||| ||||| ||||||    
T  11639395 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttatgcaaacagtttata 11639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 32515405 - 32515500
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaa 384  Q
    ||||||||||||| ||||||||||| ||||| | ||||||||| |  ||||||||||| ||||||| | |||||  |||| | ||||| |||||||    
T  32515405 gtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagctctccatgatagcttatgaa 32515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 3224529 - 3224415
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||| ||| |||||||||  ||||  |||| |||||||||||| || ||||||||| | | |||||||| |||| |||||||| |||| |||| ||||||    
T  3224529 gtgacactatttgagagaatttatacaaactacttatgacatgtccataagttgttctcagcttattttcataagttctctagaatagcttataaaaaca 3224430  T
Q  389 atttatagcttatat 403  Q
       ||||||||||||    
T  3224429 ccctatagcttatat 3224415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 4548821 - 4548759
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 357  Q
    |||||||||||| || ||| ||||||||||||||||| | |||||||||||| | ||||||||    
T  4548821 ctgtttgagagacctaatggaaacaacttatgacatgcctgtaagttgtttttagcttatttt 4548759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 4699598 - 4699676
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    ||||||||||||||||||||||||  | |||| |||||| | ||||||| |||||  ||||  ||||||||||||||||    
T  4699598 cttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaa 4699676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 298 - 356
Target Start/End: Complemental strand, 6262835 - 6262777
Alignment:
Q  298 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||| ||||||||||||||| ||||||||| ||| || ||||||||||||| |||||||    
T  6262835 tttgggagagcttatgaaaataacttatgatatgtccataagttgttttaagcttattt 6262777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 27140623 - 27140517
Alignment:
Q  250 gattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaa 349  Q
    ||||||||||| | |||||||||||||| || ||||   || || || |||||||||| ||| | ||||| ||||||||||| || ||||||||||| |     
T  27140623 gattgacttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcag 27140524  T
Q  350 cttattt 356  Q
    |||||||    
T  27140523 cttattt 27140517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 309 - 403
Target Start/End: Original strand, 29045896 - 29045990
Alignment:
Q  309 ttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||||||||||||||||||||||| || ||||||| ||| ||| || ||  || |  |||| |||| || |||||||||||| |||||||||||||    
T  29045896 ttatgaaaacaacttatgacatgtccataagttgcttttaacgtacttccatcatctctccaggacagcttatgaaaacaacttatagcttatat 29045990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 31517704 - 31517818
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||| |||| ||||| ||||||||| ||||||||  | |||| |||||| | |||||||| ||||  |||| | || || ||||||| |||    
T  31517704 gtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagaca 31517803  T
Q  389 atttatagcttatat 403  Q
      |||||||||||||    
T  31517804 gcttatagcttatat 31517818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 35351098 - 35351036
Alignment:
Q  336 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagct 398  Q
    ||||||||||| | ||||||||| |||  |||||||||||||||||||| |||| ||||||||    
T  35351098 taagttgttttcagcttatttttgtaagctctctaggatagtttatgaagacaacttatagct 35351036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 5591933 - 5591970
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgaca 329  Q
    |||||||||||||||||||||||||||| |||||||||    
T  5591933 agactgtttgagagagcttatgaaaacagcttatgaca 5591970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 33185927 - 33186027
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 393  Q
    |||||||||||||| |||||||||||| |||||||||  || |||  |||||| |||||||||  || |  |||||||||||| |||| ||||||| |||    
T  33185927 actgtttgagagagtttatgaaaacaaattatgacatttccataacctgttttcaacttatttacat-atatctctaggatagcttataaaaacaactta 33186025  T
Q  394 ta 395  Q
    ||    
T  33186026 ta 33186027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 401
Target Start/End: Original strand, 37842338 - 37842431
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttat 401  Q
    |||||||||||| || ||||||||  | ||||  ||||| | ||||||||||||| ||||  | ||||| |||||||||||| |||||||||||    
T  37842338 cttatgaaaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttat 37842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 42336717 - 42336664
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||||||||| | |||||||||||||||||||||||| ||  ||||||||||    
T  42336717 gactgtttgagataacttatgaaaacaacttatgacatgtccaaaagttgtttt 42336664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 1432560 - 1432508
Alignment:
Q  350 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||| ||| |||| ||||| | |||||||||||||||||||||||||||||||    
T  1432560 cttactttcataagttctccaagatagtttatgaaaacaatttatagcttata 1432508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 338 - 402
Target Start/End: Original strand, 4700079 - 4700143
Alignment:
Q  338 agttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||| | |||||||| ||||  |||| |||||||||||| |||||| |||||||||||||    
T  4700079 agttgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttata 4700143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 8780394 - 8780430
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||||||| ||||||||||||||||||    
T  8780394 ctgtttgagagagcttataaaaacaacttatgacatg 8780430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 11695967 - 11695855
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| |||||| || ||| |||| |||||  |||||||||| || |||| |||||| |||||||||| ||||  | || || ||||| ||| ||||||    
T  11695967 gtgagattgtttgggaaagcatatggaaacagtttatgacatgtccataagctgttttcaacttattttcataagctttccagaatagtctataaaaaca 11695868  T
Q  389 atttatagcttat 401  Q
     ||||||||||||    
T  11695867 ttttatagcttat 11695855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 15579585 - 15579533
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 344  Q
    |||||||||| |||||||| || ||||||||||||||||| || |||||||||    
T  15579585 agactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgtt 15579533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 294 - 403
Target Start/End: Original strand, 28689421 - 28689532
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatag--tttatgaaaacaatt 391  Q
    ||||||| ||||| |||| | ||||| ||||||||||| || ||||||||||| | |||||||| ||||  | || | |||||  | ||||||||||| |    
T  28689421 actgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaact 28689520  T
Q  392 tatagcttatat 403  Q
    ||||||||||||    
T  28689521 tatagcttatat 28689532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 33108605 - 33108653
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    ||||||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  33108605 cttatgaaaacaactcatgccatgaccataagttgttttcaacttattt 33108653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 36151502 - 36151582
Alignment:
Q  322 ttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||||||| || |||  |||||| |||||||||| ||||  || ||||||| ||||| |||||||||||||| ||||||    
T  36151502 ttatgacatgtccataacctgttttcaacttattttcataagctcactaggattgtttacgaaaacaatttataacttata 36151582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 303 - 403
Target Start/End: Original strand, 39270403 - 39270503
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||||||||||| ||| || |||| || |||| |||||| |||||||||| |||   |||||| | ||| |||||||||||  ||||| ||||||    
T  39270403 gagagcttatgaaaacagcttttggcatgtccataagctgttttcaacttattttcatatgctctctatggtagcttatgaaaacagcttatatcttata 39270502  T
Q  403 t 403  Q
    |    
T  39270503 t 39270503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 43371855 - 43371891
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttat 325  Q
    ||||||||||||||||||||||||||||||| |||||    
T  43371855 gtgagactgtttgagagagcttatgaaaacagcttat 43371891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 51929383 - 51929467
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||||| ||| |||||||||| ||| || | ||   |||| ||||||| ||||| |||||||||||| ||||||||||    
T  51929383 tttggattgacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttatgacat 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 4033981 - 4034020
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgac 328  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  4033981 gtgagattgtttgagagagcttatgaaaataacttatgac 4034020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 4200379 - 4200304
Alignment:
Q  250 gattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttat 325  Q
    ||||||||||||| || |||| || ||| || | |||  ||||||||||||| ||||||| |||||||||||||||    
T  4200379 gattgacttattttagtttatatactgatataagcatttgtgagactgtttgtgagagctaatgaaaacaacttat 4200304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 4482031 - 4481968
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 357  Q
    ||||||||||||| |||||||||||||||||| |||||  | |||| |||||| | ||||||||    
T  4482031 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttatttt 4481968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 6279499 - 6279392
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttat 394  Q
    ||||||||||||||||||| |||||  | |  ||||| || ||||||||||| | | |||||  ||||  |||||||||||| ||||||||| | ||||     
T  6279499 ctgtttgagagagcttatggaaacagttaaccacatgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaa 6279400  T
Q  395 agcttata 402  Q
    ||||||||    
T  6279399 agcttata 6279392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 388
Target Start/End: Complemental strand, 10744399 - 10744308
Alignment:
Q  297 gtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||| |||| ||| |||||||| |||||| ||||  | |||| |||||| | ||||||||||||| ||||||| || || |||||||||||    
T  10744399 gtttgggagaacttgtgaaaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaaca 10744308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 403
Target Start/End: Complemental strand, 17269401 - 17269242
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||||||||||| | |||||||  | |  | ||||   |||||| ||||||  || ||||||||||| | |||||||||||  | | ||||||    
T  17269401 tgtttggattgacttatttgaacttatcttcttatttaaacacttgtgagattgtttggtagtgcttatgaaaataccttatgacatgttcatgagttgt 17269302  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||| ||||||||    |||  |||| ||||||| |||||||||||| |||| ||||||||    
T  17269301 ttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatat 17269242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 404
Target Start/End: Complemental strand, 35669075 - 35668963
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    |||||||||||||||   ||||||||| || ||||||| ||| || ||| ||||||| |||||||||  |||| || |  ||||||  |||||||||||     
T  35669075 tgagactgtttgagaa--cttatgaaagcagcttatgatatgtccataaattgttttcaacttatttccataaattttacaggataagttatgaaaacag 35668978  T
Q  390 tttatagcttatatt 404  Q
    ||||||| |||||||    
T  35668977 tttatagtttatatt 35668963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 2522698 - 2522636
Alignment:
Q  326 gacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| |||||| ||||||| |||||||||  |||| ||||| || ||||||||||||||||    
T  2522698 gacatgtccgtaatttgttttcaacttatttccataaattctccagaatagtttatgaaaaca 2522636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 4549506 - 4549616
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgt-aagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||||||| ||||||||||  ||||||||||||||||| |  | |||||||||| |||  ||||  ||||  |||| ||||| | |||||||||||    
T  4549506 tgagactgtttgggagagcttatagaaacaacttatgacatgtctataaagttgttttcaacaaatttcaataagctctccaggattgcttatgaaaaca 4549605  T
Q  389 atttatagctt 399  Q
      |||||||||    
T  4549606 tcttatagctt 4549616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 45234289 - 45234247
Alignment:
Q  299 ttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 341  Q
    ||||||||| ||||||||||||||||||||||| || ||||||    
T  45234289 ttgagagagtttatgaaaacaacttatgacatgcccttaagtt 45234247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 49692016 - 49692058
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||||||| |||||||||| | |||||||||||    
T  49692016 gtgagactgtttgagagaacttatgaaaatagcttatgacatg 49692058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 5157221 - 5157140
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatga 327  Q
    ||||||||||||||||| | ||||||||  || || ||||   |||| |||||||| ||||||||||  |||||||||||||    
T  5157221 tttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 389
Target Start/End: Original strand, 12564418 - 12564563
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||| |||||||||||| ||||||| || ||| || | ||   ||| ||||||||| ||||||||| | | | | ||||||||| | |  ||||||||    
T  12564418 tgtttgaattgacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaataagttgt 12564517  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||| | |||||||  |||| ||||| | ||||| ||||||||||||    
T  12564518 tttcagcttatttccataagttctccaagatagcttatgaaaacaa 12564563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 16980909 - 16980868
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    |||||||| |||||||||||||||| |||||||||| |||||    
T  16980909 gtgagactatttgagagagcttatggaaacaacttacgacat 16980868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 403
Target Start/End: Original strand, 26946472 - 26946525
Alignment:
Q  350 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||| || ||||||||| ||||| |||||||||| | |||||||||||||    
T  26946472 cttattttcatgacttctctaagatagcttatgaaaacgacttatagcttatat 26946525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 27963341 - 27963434
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||| |||||||   |||| ||||||||||| || ||||||||||| | ||||||| |||||  |||| |  |||| ||||||||||||    
T  27963341 tgtttgagaaagcttatattaacagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaa 27963434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 29929585 - 29929642
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||| |||||||  |||||||||||||||||||| ||||||||  | |||||||||||    
T  29929585 gtgatactgttttggagagcttatgaaaacaactcatgacatgtgcataagttgtttt 29929642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 273
Target Start/End: Original strand, 37241740 - 37241769
Alignment:
Q  244 tgtttggattgacttatttaagcttatcta 273  Q
    ||||||||||||||||||||||||||||||    
T  37241740 tgtttggattgacttatttaagcttatcta 37241769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 37941955 - 37942004
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 344  Q
    ||||||||||||||||||  |||||| |||||||||| || |||||||||    
T  37941955 ctgtttgagagagcttatagaaacaatttatgacatgtccataagttgtt 37942004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 38001702 - 38001645
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||||| |||| |||||||||||| |||||||| ||  | |||||||||||    
T  38001702 gtgagactgtttgggagaacttatgaaaacagcttatgacctgttcataagttgtttt 38001645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 43722308 - 43722365
Alignment:
Q  305 gagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||||||| |||||||||||||  | || |||||||| | |||||||||||||    
T  43722308 gagcttatgaaaaaaacttatgacatgttcttatgttgttttcagcttatttttataa 43722365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 44422804 - 44422691
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||| || ||||||||||||||| | ||||||||||| || |||| ||  |  | |||||||| ||||  |||| ||||||| |||| |||| |     
T  44422804 tgagactgtctgggagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagcttataaaaatag 44422705  T
Q  390 tttatagcttatat 403  Q
     |||||||||||||    
T  44422704 cttatagcttatat 44422691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 49521770 - 49521811
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||| ||||||||||||||| || |||||||||||||||||    
T  49521770 tgagattgtttgagagagcttgtggaaacaacttatgacatg 49521811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 2e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 246 - 399
Target Start/End: Original strand, 39551130 - 39551283
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttt 345  Q
    ||||||||||||||||| || |||||||  || || | |||  |||| |||||||| ||||  ||||| ||||||||||||||||| ||  ||| |||||    
T  39551130 tttggattgacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgttt 39551229  T
Q  346 taaacttatttttataacttctctaggatagtttatgaaaacaatttatagctt 399  Q
    | |||||||||||||||  |||| |||| || |||||||||||| |||||||||    
T  39551230 ttaacttatttttataagctctccaggaaagcttatgaaaacaacttatagctt 39551283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 288 - 403
Target Start/End: Complemental strand, 30389206 - 30389091
Alignment:
Q  288 cgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaac 387  Q
    ||||| ||||||||||||||| |||||||| | || ||||||||  | ||||||||||| | |||||||| |||| |||||||||| || ||||||||||    
T  30389206 cgtgacactgtttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaac 30389107  T
Q  388 aatttatagcttatat 403  Q
    |   ||||||||||||    
T  30389106 agcgtatagcttatat 30389091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 8629562 - 8629489
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||| | |||||||    
T  8629562 gtgagaccgtttgagagaacttatgaaaacaacttatgacatgatcataagttgttttcaacttctatttataa 8629489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 14949972 - 14949875
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    ||||||||||||  ||||||||||||||| ||||||||||||| || |||| |||||| | ||||||| |||||  ||| |||||||| |||||||||    
T  14949972 gtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaa 14949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 410
Target Start/End: Complemental strand, 2091914 - 2091746
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||||||||| |||||| | |||||| | ||  || ||||   |||||| |||||||||||||| |  |||||||||||||| ||  || ||||||||    
T  2091914 tgtttggattgatttatttgatcttatccaatggcataaacacttgtgagattgtttgagagagctcacaaaaacaacttatgatatatccataagttgt 2091815  T
Q  344 tttaaacttatttttata---acttctctaggatagtttatgaaaacaatttatagcttatattgaaaca 410  Q
    ||| ||||||||| ||||    |||| | ||||||| |||||||||||| || ||||||||||| |||||    
T  2091814 tttcaacttatttctatatgctcttcac-aggatagcttatgaaaacaacttgtagcttatattaaaaca 2091746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 6950468 - 6950361
Alignment:
Q  249 ggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaa 348  Q
    |||||||||||||| || ||||||| ||  || |||||  |||||| |||||| ||||||||||| ||||||| ||||||||| |  ||||||||||| |    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttca 6950369  T
Q  349 acttattt 356  Q
     |||||||    
T  6950368 gcttattt 6950361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 11569421 - 11569520
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||||||| |||||||||||| ||||| |||||||||||  | ||||||||||| | |||||||| | ||  |||| | ||||| |||||||||||    
T  11569421 gtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaaca 11569520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 388
Target Start/End: Complemental strand, 8060819 - 8060676
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgt-gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttg 342  Q
    ||||||||||||||||||| ||| |||||||||| || ||||  | | || ||||||||||||||||||||||||||| |||||  | |  | ||||||     
T  8060819 tgtttggattgacttatttgagcatatctattgacataaaca--cttcgaaactgtttgagagagcttatgaaaacaaattatggaaagttcataagtta 8060722  T
Q  343 ttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||| | |||||||  ||||  |||||||||| | |||||||||||    
T  8060721 ttttcagcttatttccataagctctctaggattgcttatgaaaaca 8060676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 9700152 - 9700034
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||||||| |||||||| |||||||||| |   || ||||   |||||||| ||||||||||||| ||||| ||| |||||||||| || |||| |||    
T  9700152 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgt 9700053  T
Q  344 tttaaacttatttttataa 362  Q
    ||| | |||||||| ||||    
T  9700052 tttcaccttattttcataa 9700034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 26473730 - 26473816
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||||||||||| ||||||||||| |  |||| |  ||| |||||||||| ||||  |||||||||||| ||||||||||||    
T  26473730 gagagcttatgaaaacagcttatgacatgtctataagctagttttaacttattttcataagctctctaggatagcttatgaaaacaa 26473816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 291 - 396
Target Start/End: Original strand, 779027 - 779132
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 390  Q
    |||| ||||||| ||| |||| |||||||||||||||||||  | ||||||||||| | ||||||||  ||   |||| | ||||||||||||||||| |    
T  779027 gagattgtttgaaagaacttacgaaaacaacttatgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaacagt 779126  T
Q  391 ttatag 396  Q
    ||||||    
T  779127 ttatag 779132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 30918218 - 30918177
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  30918218 gtgagactgtttgagagagcttatgaaaacaacttgtgacat 30918177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 26479936 - 26479849
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||||||||||||||||||||||| |  |  |   |||| ||| |||| ||||||||||| |||||||||||| ||||    
T  26479936 tgtttggattgacttatttaagcttatctattgacacaaggacttgtgaaactatttgcgagagcttatggaaacaacttatgtcatg 26479849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 27412809 - 27412884
Alignment:
Q  252 ttgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatga 327  Q
    ||||||||||| ||||||| || ||||||  ||||   ||| ||| ||||||||||||||||||||||||||||||    
T  27412809 ttgacttatttgagcttatatactgaaatacacatgtctgaaactatttgagagagcttatgaaaacaacttatga 27412884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 43368619 - 43368706
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||||||| | |||||||| | | || | |||  ||||||||| |||  | ||||||||||||||||||||||||||    
T  43368619 tgtttggattgacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatg 43368706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 7918412 - 7918510
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||||| |||||||||||||||||||||| ||||||  | |||| |||||  |||||||||  ||||  |||| | ||||| ||| ||||||||    
T  7918412 gagactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaa 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 9540967 - 9541057
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    |||||| ||||||||||| ||||| ||||||||||| || ||| |||| || | |||||||| | ||  |||||||||||| |||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtccataatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaa 9541057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 11770978 - 11771048
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||| | ||| |||||||||||||||||||| ||| |  || |||||||| |||||||||||||||    
T  11770978 agactgtttaaaagaacttatgaaaacaacttatgatatgtctatacgttgttttcaacttatttttataa 11771048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 30987955 - 30987997
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  30987955 gtgagtctgtttgagagagcttatggaaacaacttatgacatg 30987997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 40071855 - 40071741
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| |||||| ||||||||||| |||||||||||||||||  | |||   | ||| |||| ||||| ||||  | |||||||||| || ||||||||    
T  40071855 gtgagagtgtttgggagagcttatggaaacaacttatgacatgttcataatcagctttcaactaattttcataagctttctaggatagcttctgaaaaca 40071756  T
Q  389 atttatagcttatat 403  Q
     |||||||| |||||    
T  40071755 gtttatagcatatat 40071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 396
Target Start/End: Complemental strand, 7714394 - 7714241
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttg 342  Q
    |||||||||||||||||||| ||||||| || ||  || ||||   |||||||||||||  | ||||| || ||||||||||||| ||| |  | || ||    
T  7714394 atgtttggattgacttatttgagcttatataatgtcataaacacttgtgagactgtttggaaaagcttgtggaaacaacttatgaaatgtcgatgagctg 7714295  T
Q  343 ttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatag 396  Q
    |||| |||||||||| || |  |||| | ||||| | |||||||||| ||||||    
T  7714294 ttttcaacttattttcatgagctctccaagatagctcatgaaaacaacttatag 7714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 31875559 - 31875632
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| || ||||   |||| |||||||||| ||||    
T  31875559 gtgacactgtttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttcataa 31875632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 2487926 - 2488014
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||| ||||||| || | ||||| ||| || | ||   ||||||||||||| |||| |||||||||||||||||| |||||    
T  2487926 atgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacatg 2488014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 295 - 403
Target Start/End: Original strand, 6509273 - 6509381
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttat 394  Q
    ||||||||||||||||||  ||||| ||||||||||| |  |||  | |||| | |||||||  ||||  |||| ||||||| |||||||||||  ||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttcaccttatttcaataagctctccaggatagcttatgaaaacagcttat 6509372  T
Q  395 agcttatat 403  Q
    |||||||||    
T  6509373 agcttatat 6509381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 7918745 - 7918781
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttat 325  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7918745 gtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 9572975 - 9572919
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||||||||| |||| |||| ||||| ||||||||||||| || |||||||||||    
T  9572975 tgagactgtttgtgagaacttacgaaaataacttatgacatgtccataagttgtttt 9572919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 292 - 400
Target Start/End: Complemental strand, 12851279 - 12851171
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    |||||||||| || | |||||||||||| ||||| |||||  | |||| ||||||   |||||||| ||||  |||| |||| || ||||||||||||||    
T  12851279 agactgtttgggaaaacttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaatt 12851180  T
Q  392 tatagctta 400  Q
    | |||||||    
T  12851179 tctagctta 12851171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 30191108 - 30191147
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  30191108 agactgtttgggagagcttatggaaacaacttatgacatg 30191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 32840951 - 32840990
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  32840951 gagactgtttgggagaacttatgaaaacaacttatgacat 32840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 4251062 - 4251020
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||||||| ||||||||||  |||||||||||    
T  4251062 gtgagactgtttgagagagtttatgaaaactgcttatgacatg 4251020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 274
Target Start/End: Original strand, 25930495 - 25930525
Alignment:
Q  244 tgtttggattgacttatttaagcttatctat 274  Q
    |||||||||||||||||||||||||||||||    
T  25930495 tgtttggattgacttatttaagcttatctat 25930525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 31862595 - 31862486
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    |||||||||||||||| ||| | || ||||||||||| |   | |||| |||||| | |||||||| ||||  |||||||||||  |||||||||||  |    
T  31862595 agactgtttgagagag-ttacggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatct 31862497  T
Q  392 tatagcttata 402  Q
    |||||||||||    
T  31862496 tatagcttata 31862486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 41442417 - 41442459
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||    
T  41442417 gtgagactgtttgacagaacttatgaaaacaatttatgacatg 41442459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 4560652 - 4560551
Alignment:
Q  245 gtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 344  Q
    |||||||||||||||||| |||||||||||||| || | ||   |||||  ||||||  ||| |||||| ||| ||||||| ||||| | ||||| ||||    
T  4560652 gtttggattgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaataacttataacatgtcagtaagctgtt 4560553  T
Q  345 tt 346  Q
    ||    
T  4560552 tt 4560551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 10120859 - 10120822
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  10120859 gactgtttgagagaacttatgaaaacagcttatgacat 10120822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 326
Target Start/End: Original strand, 11056630 - 11056667
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatg 326  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  11056630 gtgagattgtttgagagagtttatgaaaacaacttatg 11056667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 22505693 - 22505611
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgac 328  Q
    ||||| ||||||||||||| |||||||||||||| ||  | |||  ||||| || || ||| |||||| ||||||||||||||||    
T  22505693 tgtttagattgacttatttgagcttatctattgacat--aaatatttgagattggtttagaaagcttacgaaaacaacttatgac 22505611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 26371067 - 26371014
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||||||||||| |||||| |||| ||||||||||||  ||| |||||||||    
T  26371067 gactgtttgagagatcttatggaaactacttatgacatgtgcgtcagttgtttt 26371014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 30251373 - 30251453
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttat 325  Q
    ||||||||||| ||||||| |||||||||| ||| || ||  | |||||||||||||| |||| |||| ||||||| |||||    
T  30251373 tgtttggattggcttatttgagcttatctactgacat-aagtttcgtgagactgtttgggagaacttacgaaaacagcttat 30251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 35220702 - 35220791
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 393  Q
    |||| |||||||||||  |||||||||| || |||| | |||| | |||||||||||||  |||| || |||| ||||||||||| ||||    
T  35220702 agagtttatgaaaacagtttatgacatgcccataagctatttttagcttatttttataagctctccagaatagcttatgaaaacagttta 35220791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 3e-20; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 303 - 423
Target Start/End: Complemental strand, 9556331 - 9556209
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||||||||||||||||| |||||||| || ||||| | ||| |||||||||| ||||  | |||||||||| ||||||||||| |||||||||| ||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaacagtttatagcttgta 9556232  T
Q  403 ttgaaacac--tgactttatttt 423  Q
    |  ||||||  ||||||||||||    
T  9556231 tgaaaacacgttgactttatttt 9556209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 27699493 - 27699599
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||  | | |||||| | |||||||  ||   ||||| | |||||||||||||||||    
T  27699493 gtgagactgtttgagagagtttatgaaaacaacttatgacatcaccacatgctgttttcagcttatttccatcgattctccatgatagtttatgaaaaca 27699592  T
Q  389 atttata 395  Q
    | |||||    
T  27699593 acttata 27699599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 400
Target Start/End: Complemental strand, 28933972 - 28933819
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttt 345  Q
    ||||||||| ||||||  |||||||||| ||  || |||||   | || |||||||  ||||||||||||||||||||||| ||||  | || | |||||    
T  28933972 tttggattggcttattagagcttatctagtgccataaacatttataagtctgtttggaagagcttatgaaaacaacttatggcatgttcata-gctgttt 28933874  T
Q  346 taaacttatttttataacttctctaggatagtttatgaaaacaatttatagctta 400  Q
    | ||||||||| ||| |  |||||||||||| |||||||||||||||||| ||||    
T  28933873 tcaacttatttctatcagctctctaggatagcttatgaaaacaatttataactta 28933819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 294 - 403
Target Start/End: Original strand, 30552612 - 30552722
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttg-ttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 392  Q
    ||||||||||| || ||||  ||||||||||||||||| |  ||||||| |||| | |||||||  ||||  |||||||||||||||||||||| |||||    
T  30552612 actgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataattt 30552711  T
Q  393 atagcttatat 403  Q
    |||||| ||||    
T  30552712 atagctgatat 30552722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 306 - 403
Target Start/End: Complemental strand, 10285949 - 10285852
Alignment:
Q  306 agcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||||||| ||||||||||||| || |||| |||||| |||||||||  |||| ||||||| | ||| ||||| |||| | |||||||||||||    
T  10285949 agcttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatat 10285852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 13867030 - 13866942
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||| ||||| |||||||||| ||  || ||||   |||||||||||||||||| |||| ||||||||| |||||||||    
T  13867030 atgtttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatgacatg 13866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 392
Target Start/End: Complemental strand, 15120334 - 15120186
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||||||||||| | |||||||| |   || ||||   ||||  ||||||| ||||||||||| |||||||||||||||||  | | || |||    
T  15120334 tgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgttcattagctgt 15120235  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaattt 392  Q
    ||||| |||||||| ||||  |||| | ||||| ||| |||||||||||    
T  15120234 tttaagcttattttgataagctctccatgatagcttacgaaaacaattt 15120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 410
Target Start/End: Original strand, 7103392 - 7103568
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagct---tatgaaaacaact------tatgacatgacc 334  Q
    ||||||||||||||||||| || ||||||||||| |||| || | |||||| |||||| |||||||   |||| ||||||||      ||||||||  ||    
T  7103392 tgtttggattgacttatttgagtttatctattgacatgagcacatgtgagattgtttgggagagctatgtatgtaaacaacttatgagtatgacatatcc 7103491  T
Q  335 gtaagttgttttaaacttatttttataacttctctaggatagtttatg-aaaacaatttatagcttatattgaaaca 410  Q
     ||||||||||| | |||||||| | ||  |||||| ||||| ||||| ||||||  |||||||||||||| |||||    
T  7103492 ataagttgtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaaca 7103568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 403
Target Start/End: Complemental strand, 8017585 - 8017426
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||||||||||| || ||||||||||| || | ||   ||| || | |||| |||| |||||||||||| ||||||| |||  | ||| ||||    
T  8017585 tgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttatgatatgttcataatttgt 8017486  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||   | |||||| |||| ||||| | ||||| ||||||||||| |||| |||||||||    
T  8017485 tttctgcgtattttcataagttctccaagatagcttatgaaaacagtttacagcttatat 8017426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 22681149 - 22681263
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| ||||||||||   |||||||||||||  || |||||  | |||| |||||| | |||||||  |||| ||||||||||||| |||||||||||    
T  22681149 gtgagaatgtttgagagtttttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaaca 22681248  T
Q  389 atttatagcttatat 403  Q
      |||||||||||||    
T  22681249 gcttatagcttatat 22681263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 32821912 - 32821806
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    ||||||||||  |||| ||||  ||||||||||||||||| || |||| |||||| |  |||||| |||||  ||| |||||||| ||||||||||| ||    
T  32821912 agactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtt 32821813  T
Q  392 tatagct 398  Q
    |||||||    
T  32821812 tatagct 32821806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 331
Target Start/End: Original strand, 28803451 - 28803536
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||||| ||||||||||  |  || | || | |||||||||||||||||| | |||| |||||||||||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatg 28803536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 1494415 - 1494478
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 357  Q
    |||||||||||||||||||||||||| ||||||||||| || |||  |||||| | ||||||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttttagcttatttt 1494478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 10567164 - 10567057
Alignment:
Q  288 cgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaac 387  Q
    |||||||||||||| ||||| || || ||||| |||||||||||| | ||||||||||| | || ||||| | ||  |||| || |||||||||| ||||    
T  10567164 cgtgagactgtttgggagagattgtggaaacagcttatgacatgatcataagttgttttcagctaattttcacaagctctccagaatagtttatggaaac 10567065  T
Q  388 aatttata 395  Q
    | ||||||    
T  10567064 agtttata 10567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 410
Target Start/End: Complemental strand, 43141951 - 43141856
Alignment:
Q  315 aaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaaca 410  Q
    ||||||||||||||||| || ||||||||||| |  ||||||  ||||  |||  ||||||| |||||||||||  ||||||||||||| ||||||    
T  43141951 aaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaaca 43141856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 1318342 - 1318300
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  1318342 gtgagactgtttgtgagagcttatgaaaacatcttatgacatg 1318300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 6993688 - 6993802
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||||||||| ||| |||||| ||| | |||||| |||| || |||||  |||| | |||||||| ||||  |||| || |||| |||||||||||    
T  6993688 gtgagactgtttgatagaacttatgtaaatagcttatggcatgtccataagtcatttttagcttattttcataagctctcaagcatagcttatgaaaaca 6993787  T
Q  389 atttatagcttatat 403  Q
    |  ||||||||||||    
T  6993788 acctatagcttatat 6993802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 13220534 - 13220472
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    ||||||||||||| ||||| ||||||||||||||| ||  | |||| ||||||||||||||||    
T  13220534 actgtttgagagaacttataaaaacaacttatgacttgttcataagctgttttaaacttattt 13220472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 22878250 - 22878164
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgaca 329  Q
    |||||||||||||||||||| |||||||| | ||| || | ||   ||||||||||||| |||| |||||| |||||| ||||||||    
T  22878250 atgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatgaca 22878164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 326
Target Start/End: Complemental strand, 27317530 - 27317449
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatg 326  Q
    ||||||||||||||||||| ||||||||||  || || ||  |   ||||||||||||||||| |||||||||||||||||||    
T  27317530 tgtttggattgacttatttgagcttatctaccgacat-aagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 385
Target Start/End: Complemental strand, 33192345 - 33192212
Alignment:
Q  251 attgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaac 350  Q
    |||| ||||||| |||||||||  ||| || ||||  | ||||||||||||| ||| ||||||||||||  |||||||||  || |||| |||||| | |    
T  33192345 attggcttatttgagcttatctgctgacataaacactcatgagactgtttga-agaacttatgaaaacagtttatgacatatccataagctgttttcagc 33192247  T
Q  351 ttatttttataacttctctaggatagtttatgaaa 385  Q
    |||| |||||||  |||| ||||||| ||||||||    
T  33192246 ttatatttataagctctccaggatagcttatgaaa 33192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 400
Target Start/End: Complemental strand, 33942258 - 33942145
Alignment:
Q  289 gtgagactgtttgagagagcttatg--aaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    |||||||||||||||||||||||||   | |||||||||||||||  | |||| |||||| | || ||||| || |  |||||| ||| | |||||||||    
T  33942258 gtgagactgtttgagagagcttatggagagacaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaa 33942159  T
Q  387 caatttatagctta 400  Q
    ||| ||||||||||    
T  33942158 caacttatagctta 33942145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 43065428 - 43065514
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||||||||||||||||||||||| || ||| ||||||| | |||||||  ||||  |||| | ||||  ||||||||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaa 43065514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 293 - 391
Target Start/End: Original strand, 44606078 - 44606176
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    |||||||||  ||| |||||||||||||||||||||||| || ||||||||||| | || ||||| |||| |  | ||| |||  ||||||||||||||    
T  44606078 gactgtttggaagaacttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataagtgttttagaataacttatgaaaacaatt 44606176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 14316109 - 14316222
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||| |||  ||||||||||| ||||||||||||||||     |||| |||||| | ||||||| |||| |||||| | ||| |  |||||||| |    
T  14316109 gtgagactattttggagagcttatggaaacaacttatgacatatgtataagctgttttcagcttatttctatagcttctcaaagattgcatatgaaaata 14316208  T
Q  389 atttatagcttata 402  Q
    ||||||||||||||    
T  14316209 atttatagcttata 14316222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 34652000 - 34652097
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    ||||||| ||| |||| |||||||  ||||||||||||||||| || |||| |||||| |||||||||  ||||  |||| | ||||| |||||||||    
T  34652000 gtgagacggttggagaaagcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 1899986 - 1899934
Alignment:
Q  350 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||||||||||  ||| ||| |||||||||||||||| |||||||||||||    
T  1899986 cttatttttataaactctttagaatagtttatgaaaacattttatagcttata 1899934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 9878661 - 9878713
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||| ||||||||||||||||| || |||||||||||  ||||||||    
T  9878661 agagcttatggaaacaacttatgacatgtccataagttgttttcgacttattt 9878713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 35810771 - 35810863
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 395  Q
    ||||||||||  |||||||||||| | || || |||||| |||| | |||| ||| |||| |||||||||||||  |||||||||||| ||||    
T  35810771 gagagcttatagaaacaacttatggcctggccataagttatttttagcttactttcataagttctctaggatagcgtatgaaaacaatatata 35810863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 11063592 - 11063521
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    |||||||||||  |||||||||| |||||  |||||||||| || ||||||||||| | |||||||| ||||    
T  11063592 gagactgtttggaagagcttatggaaacatattatgacatgtccataagttgtttttagcttattttcataa 11063521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 400
Target Start/End: Original strand, 12313137 - 12313248
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| |||||| ||||  ||||||||||| |||||| ||||  | ||||||| ||| | |||||||| ||||  |||| | ||||| ||||| |||||    
T  12313137 gtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagcttatgtaaaca 12313236  T
Q  389 atttatagctta 400  Q
    |||| |||||||    
T  12313237 atttgtagctta 12313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 39622052 - 39622017
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgaca 329  Q
    ||||||||||||| ||||||||||||||||||||||    
T  39622052 actgtttgagagaacttatgaaaacaacttatgaca 39622017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 43808661 - 43808622
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  43808661 agactatttgagagagcttatgaaaataacttatgacatg 43808622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 4550849 - 4550811
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatg 4550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 9477999 - 9477945
Alignment:
Q  348 aacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||||||| ||||| |||| ||||||| |||||||||||| ||||| ||||||    
T  9477999 aacttattttcataacctctccaggatagcttatgaaaacaacttataacttata 9477945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 13234609 - 13234547
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttat 354  Q
    |||||||||||||| |||||  ||||||  |||||||||| || ||||||||||| |||||||    
T  13234609 agactgtttgagagtgcttacaaaaacacattatgacatgtccataagttgttttcaacttat 13234547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 19978098 - 19977996
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||||||| |||||||| || ||||||||| |||| | ||   | |||||||||||||||| |||||  ||||||||||| ||| |  | ||||||||    
T  19978098 tgtttggattcacttattttagtttatctattaaaataagcacttgcgagactgtttgagagaacttatagaaacaacttataacacgttcataagttgt 19977999  T
Q  344 ttt 346  Q
    |||    
T  19977998 ttt 19977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 32106764 - 32106866
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    |||||||||||| |||| |||||||||||| ||||||||||  | ||||| |||||| || |||| || ||||  |||  ||||||  |||||||| |||    
T  32106764 tgagactgtttgtgagaacttatgaaaacagcttatgacatatctgtaagctgttttcaaattatgttcataagctcttcaggataacttatgaaagcaa 32106863  T
Q  390 ttt 392  Q
    |||    
T  32106864 ttt 32106866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 402
Target Start/End: Complemental strand, 33941996 - 33941902
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||||||||||||||||||| |  | |||| || ||| |||||||| | ||||  |||| | ||||| |||||||||||| ||||| ||||||    
T  33941996 cttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttata 33941902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 352
Target Start/End: Complemental strand, 43985358 - 43985252
Alignment:
Q  246 tttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttt 345  Q
    ||||||| |||||||||||| ||||||| ||| || ||||   || | |||||||||||||| |||   ||||||||||||||||| || |||| | |||    
T  43985358 tttggatcgacttatttaagtttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttt 43985259  T
Q  346 taaactt 352  Q
    | |||||    
T  43985258 tcaactt 43985252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 787438 - 787381
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||| |||||||| |||| |||||||||||| ||||||||||| || |||| ||||||    
T  787438 gtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgtttt 787381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 1741997 - 1742038
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||| |||| ||||||||||| |||||||||||||||||    
T  1741997 tgagactatttgggagagcttatggaaacaacttatgacatg 1742038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 1939302 - 1939395
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| |||||| || | | |||||||||||||||| || |||| |||||| |||||||||  ||||  |||| || |||| |||||||||||    
T  1939302 ctgttttagagagattgtaataacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 7862865 - 7862824
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||| ||||||||||| ||||||||||||| |||||    
T  7862865 tgagactgttcgagagagcttacgaaaacaacttataacatg 7862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 9478401 - 9478348
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||||||| ||||| ||||||||||| ||||| || |||| ||||||    
T  9478401 gactgtttgagagagtttatgcaaacaacttattacatgtccataagctgtttt 9478348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 9996844 - 9996771
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||| ||| ||||||||||  ||||||||||||||||  || ||| ||||| | |||||||||| ||||    
T  9996844 gtgagactgcttgggagagcttatagaaacaacttatgacatacccataaattgttctcaacttattttcataa 9996771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 12140630 - 12140597
Alignment:
Q  297 gtttgagagagcttatgaaaacaacttatgacat 330  Q
    |||||||||| |||||||||||||||||||||||    
T  12140630 gtttgagagaacttatgaaaacaacttatgacat 12140597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 16451225 - 16451184
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||| ||||| |||| |||||||||||||||||||||||    
T  16451225 gtgagaccgtttgggagaacttatgaaaacaacttatgacat 16451184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 35378994 - 35379079
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||||||| || ||||| ||  | ||||||||||| | |||||||| ||||  |||| | ||||| |||||||||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 2e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 46082141 - 46082026
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggata--gtttatgaaaac 387  Q
    ||||||||||   |||||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||  |||| || |||  || |||||||||    
T  46082141 tgagactgttaatgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaac 46082042  T
Q  388 aatttatagcttatat 403  Q
    || ||||| |||||||    
T  46082041 aacttataacttatat 46082026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 403
Target Start/End: Original strand, 34754737 - 34754887
Alignment:
Q  252 ttgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaact 351  Q
    ||||||| ||| |||||||||||||| |  ||||    |||||||||||||||||||||| ||||||| ||||||||| | |  ||||||||||| | ||    
T  34754737 ttgacttgtttgagcttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaacatcttatgacaagcctataagttgttttcagct 34754836  T
Q  352 tatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||  || |  |||| |||||||||||||||||||| |||  ||||||||    
T  34754837 tatttccatcagctctc-aggatagtttatgaaaacaacttacggcttatat 34754887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 25670512 - 25670673
Alignment:
Q  251 attgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaac 350  Q
    ||||||||| || |||||||||||||| || | |    |||||||||||||||| | ||||||||||||||||||||||||    ||| ||||||| | |    
T  25670512 attgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagc 25670611  T
Q  351 ttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaacact 412  Q
    ||||||| | ||  |||| | ||||  |||| ||||||||| |||||||||||  |||||||    
T  25670612 ttattttcacaagctctccaagatatgttataaaaacaattgatagcttatatgaaaacact 25670673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 33894779 - 33894666
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttg 342  Q
    |||||||||||  ||||||| |||||||| | ||| || | ||   ||||||||||||| ||||||||||||||||| | ||||||||| || |||||||    
T  33894779 atgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttg 33894680  T
Q  343 ttttaaacttattt 356  Q
    |||| | |||||||    
T  33894679 ttttcagcttattt 33894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 410
Target Start/End: Original strand, 48157084 - 48157205
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||| ||||||||||  |||||||||||| |||| || |||| |||||| | |||||||  ||||  ||||  | |||| || ||||||||    
T  48157084 gtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaaca 48157183  T
Q  389 atttatagcttatattgaaaca 410  Q
    | |||||||||||||| |||||    
T  48157184 aattatagcttatattaaaaca 48157205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 30496801 - 30496743
Alignment:
Q  299 ttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 357  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||| | ||||||||    
T  30496801 ttgagagagcttatgaaaacagcttatggcatgcccgtaagttgttttcagcttatttt 30496743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 38010820 - 38010706
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| ||||||||||   |||||||||||||  || |||||  | |||| |||||| | |||||||  |||| ||||||||||||| |||||||||||    
T  38010820 gtgagaatgtttgagagtttttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaaca 38010721  T
Q  389 atttatagcttatat 403  Q
      |||||||||||||    
T  38010720 gcttatagcttatat 38010706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 401
Target Start/End: Original strand, 28691755 - 28691911
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||||||||||| || ||||||  | | || | |||  ||||||||||| | |||| |||||||||||| |||||||| || || ||| ||||    
T  28691755 tgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgttcg-gagatcttatgaaaacagcttatgacttgtccataaattgt 28691853  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttat 401  Q
    | | |  ||||||| ||||  |||| ||||||| ||||||||||||| |||| |||||    
T  28691854 tatcagtttattttcataagatctccaggatagcttatgaaaacaatgtataacttat 28691911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 289 - 410
Target Start/End: Original strand, 44151440 - 44151565
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaactt----atgacatgaccgtaagttgttttaaacttatttttataa-cttctctaggatagtttatga 383  Q
    |||||| | ||||||||||||||||||||||| ||    |||||||| || |||| |||||| | |||||||  |||| ||| || || |||||||||||    
T  44151440 gtgagattatttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcagcttatttccataagcttttcaag-atagtttatga 44151538  T
Q  384 aaacaatttatagcttatattgaaaca 410  Q
    |||||| ||||||||||||| ||||||    
T  44151539 aaacaacttatagcttatatggaaaca 44151565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 25422475 - 25422390
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||||||||||||||||  ||||  || ||||    |||||||||||| ||||||||||| ||||| |||||||||||    
T  25422475 tgtttggattgacttatttaagcttat--attggcattaacaccactgagactgtttgggagagcttatggaaacaccttatgacatg 25422390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 400
Target Start/End: Original strand, 33645924 - 33646035
Alignment:
Q  289 gtgagactgtttg-agagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaac 387  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||| |  ||||||||||| |  ||||||  ||||  |||| | ||||| ||||||||||    
T  33645924 gtgagactggttggagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagcttatgaaaac 33646022  T
Q  388 aatttatagctta 400  Q
    | |||||||||||    
T  33646023 agtttatagctta 33646035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 388
Target Start/End: Complemental strand, 12242350 - 12242251
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||| |  ||||||||||| | ||||||| ||||  || || |||||| ||||| ||||||    
T  12242350 gtgagactgtttgagagagcttatgcaaacggcttatgatatgcctataagttgttttcagcttatttctatacgttgtccaggataatttattaaaaca 12242251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 22387815 - 22387902
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||||| |  | ||||| || ||| || ||||   ||||||||||||| |||||||||||||||||||||||| ||||    
T  22387815 tgtttggattgacttactagaacttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatg 22387902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 23215007 - 23214920
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    |||||||||||||||||||| | |||||||| |   || ||||    |||||||||||||||||  ||||||||||||||||||||||    
T  23215007 atgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacat 23214920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 27626087 - 27626154
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||| ||||||||| |||||||| ||||| ||||||||||| || |||  ||||||||||||||||    
T  27626087 gtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttattt 27626154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 28727729 - 28727800
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||||||||||||||||| ||||  |||||||||||  |||| |||||||| | ||||||| |||||    
T  28727729 gagactgtttgagagagcttatggaaacggcttatgacatgttcgtatgttgttttcagcttatttctataa 28727800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 308 - 402
Target Start/End: Original strand, 3610723 - 3610817
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||| ||||| || |||||||| || ||||   |||| | ||||||| |||||  |||||||||||||||| |||||||| ||||||||||||    
T  3610723 cttatggaaacagctaatgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttata 3610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 17942222 - 17942144
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaact 322  Q
    |||||||| |||||| ||| |||||||||| || ||| ||||   |||||||||| ||||||| |||||||||||||||    
T  17942222 tgtttggaatgacttgtttgagcttatctactgcaataaacacctgtgagactgtctgagagaacttatgaaaacaact 17942144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 34036005 - 34035919
Alignment:
Q  308 cttatgaaaacaacttatgacat-gaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 393  Q
    |||||||||| |||||||||||| |  | ||||||||||| ||||||||||   || ||||||| ||||| ||||||||||||||||    
T  34036005 cttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaacaattta 34035919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 36538014 - 36537957
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||| ||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  36538014 gtgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 39907857 - 39907796
Alignment:
Q  341 tgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||| | |||||||| || | ||||||| ||||||||||||||||| |||||||||||||    
T  39907857 tgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttata 39907796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 400
Target Start/End: Original strand, 44615082 - 44615179
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagctta 400  Q
    ||||||||||||||||||||||||||||| ||  ||| |||||| |  ||||||  ||||  |||| ||| ||  ||||||||||| |||||||||||    
T  44615082 gagagcttatgaaaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctcaaggctaacttatgaaaacagtttatagctta 44615179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 47041958 - 47042027
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatg 313  Q
    ||||||||||||||||||| ||| |||||||||| || ||||   |||||||| |||| |||||||||||    
T  47041958 tgtttggattgacttatttgagcatatctattgacattaacacttgtgagactttttgtgagagcttatg 47042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 386
Target Start/End: Original strand, 47427275 - 47427364
Alignment:
Q  297 gtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    ||||||||||||||||| ||||||||||||||||  |  |||| | ||| || ||||||||| |||  |||| || ||||||||||||||    
T  47427275 gtttgagagagcttatggaaacaacttatgacatctctataagctatttcaagcttatttttttaaactctcaagaatagtttatgaaaa 47427364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 3468719 - 3468623
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    |||||||||||  ||||| |  || |||||||| |||||||| || ||||||||||  |||||||||  | || ||||||||||||| |||||||||    
T  3468719 tgagactgtttcggagagttgttggaaacaactaatgacatgtccataagttgtttccaacttatttccacaagttctctaggatagattatgaaaa 3468623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 294 - 386
Target Start/End: Complemental strand, 5276332 - 5276240
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    |||||||||||||||||||| ||||| ||||||||||   | | ||||||||| | |||||||| || | || || ||||||| |||||||||    
T  5276332 actgtttgagagagcttatgcaaacatcttatgacatcttcattagttgttttcaccttattttcattagttttccaggatagcttatgaaaa 5276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 30748953 - 30749029
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaa 320  Q
    |||||| ||||| |||||| |||||||||| ||| || | |  | |||||||||||||||||| |||||||||||||    
T  30748953 tgtttgaattgagttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaa 30749029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 39360130 - 39360062
Alignment:
Q  288 cgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||  || ||||||| ||| | |||||||    
T  39360130 cgtgagactgtttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttattt 39360062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 6857310 - 6857369
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatt 355  Q
    |||| ||||||||||||| ||||| |||||| |||| || ||||||||||| ||||||||    
T  6857310 tgttcgagagagcttatggaaacagcttatgccatgtccataagttgttttcaacttatt 6857369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 30535667 - 30535556
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 390  Q
    ||||||||||  |||| |||||||||||||||||||| |||  |||||| |||||| |  ||||||| |||  |||| || ||||| ||||| |||||      
T  30535667 gagactgttttggagaacttatgaaaacaacttatgatatgttcgtaagctgttttcaggttattttcatatgttctataagatagcttatggaaacagc 30535568  T
Q  391 ttatagcttata 402  Q
    |||||| |||||    
T  30535567 ttatagattata 30535556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 36598320 - 36598387
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||| |||||||||||||||||| ||||| |||||||||||  | |||| |||||| | |||||||    
T  36598320 gtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 39542266 - 39542377
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 390  Q
    ||||| |||| |||||||||||| ||| ||||||||||||| | || |||| |   ||||||||||| ||||  |||| ||||||  ||||| ||||||     
T  39542266 gagacagttttagagagcttatggaaataacttatgacatgtctgtcagttttaacaaacttattttcataagctctccaggataacttatggaaacaac 39542365  T
Q  391 ttatagcttata 402  Q
    ||||| ||||||    
T  39542366 ttatatcttata 39542377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 372 - 403
Target Start/End: Original strand, 39711453 - 39711484
Alignment:
Q  372 gatagtttatgaaaacaatttatagcttatat 403  Q
    ||||||||||||||||||||||||||||||||    
T  39711453 gatagtttatgaaaacaatttatagcttatat 39711484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 4970711 - 4970792
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatg 326  Q
    ||||||||||||||||||| |||||||||  ||| || |   |  ||||||||||||| |||| |||||||||||||||||||    
T  4970711 tgtttggattgacttatttgagcttatctcgtgacataagtctt-gtgagactgtttgggagaacttatgaaaacaacttatg 4970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 9038198 - 9038109
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagct 398  Q
    ||||| |||||| |||||||||||  | ||| ||||||| | |||||||| | || ||||| | ||||||||||||||||| |||||||||    
T  9038198 cttataaaaacagcttatgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaaaacagtttatagct 9038109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 15740394 - 15740448
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||||||||||||||||||  | |||| |||||| |||||||||| ||||    
T  15740394 cttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 21453324 - 21453286
Alignment:
Q  365 tctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  21453324 tctctaggatagcttatgaaaacagtttatagcttatat 21453286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 24363601 - 24363671
Alignment:
Q  325 tgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 395  Q
    ||||||| || ||||||||||| | |||||||  ||||| |||| ||||||| |||||||||||| |||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttata 24363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 28340385 - 28340426
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  28340385 gtgagactgttgg-gagagcttatgaaaacaacttatgacatg 28340426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 29287377 - 29287276
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||||||||||| |||| || ||||||| | | || ||||  ||||||||| ||||  |||||||||||||| | ||||||||||| || ||| ||||    
T  29287377 tgtttggattgactaatttgagtttatctagtaatataaacactcgtgagactatttgt-agagcttatgaaaatagcttatgacatgtccataaattgt 29287279  T
Q  344 ttt 346  Q
    |||    
T  29287278 ttt 29287276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 31751681 - 31751763
Alignment:
Q  247 ttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgaca 329  Q
    |||||||||||||||||| ||||| || | | || | |||  ||||||||||||   |||||||||| |||||||||||||||    
T  31751681 ttggattgacttatttaaacttatgtagtcacataagcatttgtgagactgtttataagagcttatggaaacaacttatgaca 31751763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 44808261 - 44808191
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||||| ||| |||||||||| ||||||||||||| || |||  |||||| | |||||||| ||||    
T  44808261 agactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataa 44808191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 44822018 - 44821952
Alignment:
Q  336 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||||| |||||||||| |||| ||||| || |||| |||||||||||  ||||| ||||||    
T  44822018 taagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttata 44821952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 389
Target Start/End: Original strand, 47046134 - 47046172
Alignment:
Q  351 ttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  47046134 ttatttttataatttctctaggatagcttatgaaaacaa 47046172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 6977567 - 6977463
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaac--ttatgacatgaccgtaagtt 341  Q
    ||||||||||||||||||  || ||||||||||  || | |||  |||||| |||||||| ||||||||| ||||| |  | |||||||| || ||||||    
T  6977567 tgtttggattgacttattagagtttatctattggcataagcatttgtgagattgtttgagtgagcttatggaaacagctgtcatgacatgtccataagtt 6977468  T
Q  342 gtttt 346  Q
    |||||    
T  6977467 gtttt 6977463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 17983838 - 17983769
Alignment:
Q  301 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctcta 370  Q
    ||||||| | ||| |||| | |||||| ||| ||||||||||||||||||||||||  |||| |||||||    
T  17983838 gagagagttgatggaaacgatttatgatatgtccgtaagttgttttaaacttatttcaataagttctcta 17983769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 20881661 - 20881710
Alignment:
Q  350 cttatttttataacttctctaggatagtttatgaaaacaatttatagctt 399  Q
    |||||||| |||| |||| || |||||||||||||||||| |||||||||    
T  20881661 cttattttcataagttctttaagatagtttatgaaaacaacttatagctt 20881710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 28844596 - 28844539
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||| |||||||  |||||||| |||||||||||||||||||| || | |||||||||    
T  28844596 gtgatactgtttaggagagcttctgaaaacaacttatgacatgtccatcagttgtttt 28844539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 31003045 - 31003004
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||| || |||| ||||||||||||||||||    
T  31003045 tgagactgtttgagaaagtttataaaaacaacttatgacatg 31003004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 7e-18; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 2460115 - 2460182
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||    
T  2460115 gtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttattt 2460182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 4006822 - 4006706
Alignment:
Q  287 acgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 386  Q
    |||||| ||| ||||  ||||||| ||||||||||||| || ||| || |||||| |||| | |||||||| ||||| ||||  |||||| |||||||||    
T  4006822 acgtgaaactctttggaagagcttgtgaaaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaa 4006723  T
Q  387 caatttatagcttatat 403  Q
    ||| |||||||||||||    
T  4006722 caacttatagcttatat 4006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 281812 - 281926
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||| ||||||| ||| || |||||||||||||| |  ||||||||||| | |||||||  || |  |||||||||||| ||||||| |||    
T  281812 gtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacaca 281911  T
Q  389 atttatagcttatat 403  Q
      |||||||||||||    
T  281912 gcttatagcttatat 281926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 8348377 - 8348275
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||| ||| ||||||||| ||||||||||  || || | |||   ||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  8348377 tgtttagatcgacttattttagcttatctaccgatataatcatttttgatactgtttgagagagcttacgaaaacaacttataacatgaccataagttgt 8348278  T
Q  344 ttt 346  Q
    |||    
T  8348277 ttt 8348275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 34939612 - 34939526
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatg 382  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||||| | |||||||  ||||| |||  ||||||| |||||    
T  34939612 tgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 403
Target Start/End: Original strand, 8035114 - 8035226
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 390  Q
    |||||| |||| |||| |||| |||||||||||||||||||  | ||| ||||||| ||||||||||  |||  | |||||||||  ||||||||||||     
T  8035114 gagactatttgggagaacttaagaaaacaacttatgacatggtcataacttgttttcaacttattttcgtaagctttctaggataacttatgaaaacaac 8035213  T
Q  391 ttatagcttatat 403  Q
    || ||||||||||    
T  8035214 ttctagcttatat 8035226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 10616514 - 10616578
Alignment:
Q  298 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||| || | |||||||||||||    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataa 10616578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 368
Target Start/End: Original strand, 738461 - 738582
Alignment:
Q  245 gtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 344  Q
    ||||||||| |||||||| |||||||||||||| || |||||  |||||| ||| ||| | || ||||||||||| |||||| |||| || |||||||||    
T  738461 gtttggattaacttatttgagcttatctattgagataaacatttgtgagattgtctgataaagtttatgaaaacagcttatg-catg-ccctaagttgtt 738558  T
Q  345 ttaaacttatttttataacttctc 368  Q
    || | ||||||| ||||| |||||    
T  738559 ttcagcttatttctataagttctc 738582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 33500443 - 33500501
Alignment:
Q  288 cgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||||||||||||| |||||||||||||||| ||||||||||  | |||||||||||    
T  33500443 cgtgagactgtttgagggagcttatgaaaacaatttatgacatgtgcataagttgtttt 33500501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 32171302 - 32171387
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgaca 329  Q
    ||||||||||| ||||||| ||||||  |||||| || | ||   | ||||||||||||||||||||||||||||| |||||||||    
T  32171302 tgtttggattgtcttatttcagcttaagtattgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgaca 32171387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 403
Target Start/End: Complemental strand, 30523751 - 30523652
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||| |||||| |||||||||||| ||||  | |||| |||||| |||| |||| |||||| |||| ||||||| ||||||||| || ||||||||||||    
T  30523751 gagatcttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttata 30523653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 400
Target Start/End: Complemental strand, 31624177 - 31624085
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagctta 400  Q
    |||||||||||| |||||||||||  | |||| |||||| |||||||||| |||| ||||| | |||||  ||||||||||  ||||||||||    
T  31624177 cttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 32577957 - 32578017
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||||||||||||||||||||||||||||| || | || |||||| | |||||||    
T  32577957 tgtttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttattt 32578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 384
Target Start/End: Complemental strand, 34939887 - 34939755
Alignment:
Q  252 ttgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaact 351  Q
    ||||| ||||| |||||||||| ||| || |||||  |||| |||||||  ||||||||| | ||||| ||||||||||| || ||| ||||||| | ||    
T  34939887 ttgacgtatttcagcttatctagtgacataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagct 34939788  T
Q  352 tatttttataacttctctaggatagtttatgaa 384  Q
    |||||  ||||  |||| ||||||| |||||||    
T  34939787 tatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 740805 - 740892
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||| |||||||||||| || ||||||| ||  ||||||||  ||||||  || ||||||||||| || |||||||||||||||||    
T  740805 tgtttgtattgacttatttgagattatctactgtcatgaacatttgtgagaaagtgtgagagagcttgtggaaacaacttatgacatg 740892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 9027678 - 9027611
Alignment:
Q  295 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    |||||||| |||||||||| ||| ||||||||||||| || ||||||||||| | |||||||| ||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataa 9027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 395
Target Start/End: Original strand, 20368147 - 20368250
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    ||||| |||| |||| ||||||||||||||||||||||||  | |||| |  ||| |||||||||| |||| ||||| | || || |||||||||||| |    
T  20368147 agactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaact 20368246  T
Q  392 tata 395  Q
    ||||    
T  20368247 tata 20368250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 8420114 - 8420228
Alignment:
Q  243 atgtttggattgactt-atttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 341  Q
    |||||||||||||||| |||| |||||||||||||| || ||||   ||||||||||| | ||||||||||  ||| | ||||||||||| ||  ||| |    
T  8420114 atgtttggattgactttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagct 8420213  T
Q  342 gttttaaacttattt 356  Q
     |||| |||||||||    
T  8420214 attttcaacttattt 8420228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 290 - 400
Target Start/End: Original strand, 10476087 - 10476196
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    |||||||||||  ||||||||||| ||||| || ||||||||  ||||| ||||||| | ||||||| |||| | |||| | ||||| ||||||||||||    
T  10476087 tgagactgtttatgagagcttatggaaacatctaatgacatgctcgtaaattgttttcagcttatttctatagc-tctccaagatagcttatgaaaacaa 10476185  T
Q  390 tttatagctta 400  Q
     ||| ||||||    
T  10476186 cttacagctta 10476196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 30863397 - 30863295
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||||| |||||||||| ||| ||| |||||  || ||||   || ||||| ||||  ||||||||||||||||||||||||||||  | ||||||||    
T  30863397 tgtttggagtgacttatttgagcctatttattggcataaacacttgttagactctttggtagagcttatgaaaacaacttatgacatgtacataagttgt 30863298  T
Q  344 ttt 346  Q
    |||    
T  30863297 ttt 30863295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 32917303 - 32917261
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  32917303 gtgagactgtttgggagagcttatggaaacaacttatgacatg 32917261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 403
Target Start/End: Complemental strand, 4246507 - 4246402
Alignment:
Q  298 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagc 397  Q
    |||||| |||||| || |||||||| |||||||| || |||| |||||| ||||||||||||||   |||| |  |||| |||||||||||  ||||||     
T  4246507 tttgagtgagcttttggaaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttataga 4246408  T
Q  398 ttatat 403  Q
    ||||||    
T  4246407 ttatat 4246402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 7931705 - 7931790
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||||||||||||||||||||||  | ||||||||||| | |||||||   |||  ||| |||||||| || |||||||||    
T  7931705 agagcttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaacaa 7931790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 27857464 - 27857423
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  27857464 gtgaaactgtttgggagagcttatgaaaacaacttatgacat 27857423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 725631 - 725667
Alignment:
Q  301 gagagagcttatgaaaacaacttatgacatgaccgta 337  Q
    ||||||||||||||||||||||||||||||| |||||    
T  725631 gagagagcttatgaaaacaacttatgacatgtccgta 725667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 315 - 403
Target Start/End: Complemental strand, 2112280 - 2112192
Alignment:
Q  315 aaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||||||||||||  | |||||||||||    |||||| |||||   ||||| |||||||||||||||||| |||||| ||||||    
T  2112280 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 2112192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 331
Target Start/End: Complemental strand, 2263344 - 2263256
Alignment:
Q  243 atgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||| ||||||||| ||| |||||||  || ||||     || ||||||||||||| |||||||||||||| |||||||||    
T  2263344 atgtttggattgtcttatttaaacttctctattgtcataaacacttaagaaactgtttgagagaacttatgaaaacaacatatgacatg 2263256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 8146991 - 8147071
Alignment:
Q  250 gattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    |||||||||||||||| ||| ||||||| || | ||   || ||||||||| | |||||||||||||||||||||| ||||    
T  8146991 gattgacttatttaagtttacctattgacataaccacttgttagactgtttcaaagagcttatgaaaacaacttataacat 8147071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 30865636 - 30865532
Alignment:
Q  242 aatgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 341  Q
    |||||||| | |||||||||| ||||||||| || | || ||||   || |||| |||| |||||||||||| ||| |||||||||||||| |  |||||    
T  30865636 aatgtttgtagtgacttatttgagcttatctgttaacataaacacttgttagacagtttaagagagcttatggaaataacttatgacatgatcaaaagtt 30865537  T
Q  342 gtttt 346  Q
    |||||    
T  30865536 gtttt 30865532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 290 - 370
Target Start/End: Original strand, 33832238 - 33832318
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctcta 370  Q
    |||| |||||| ||||| ||||||||||||||||||||||||    ||||||||||| | |||||||| |||  |||||||    
T  33832238 tgagtctgtttaagagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattttcatatattctcta 33832318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 7485102 - 7485137
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttat 325  Q
    |||| |||||||||||||||||||||||||||||||    
T  7485102 tgaggctgtttgagagagcttatgaaaacaacttat 7485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 10031838 - 10031771
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||||||| ||||| ||||||| ||||||| |||||  || ||||||||||| | |||||||    
T  10031838 gtgagactgtttgaaagagcctatgaaaccaacttacgacatatccataagttgttttcatcttattt 10031771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 20377898 - 20377941
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||||||||||||||||||||| |  |||||||||||    
T  20377898 gagagcttatgaaaacaacttatgacatgtctataagttgtttt 20377941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 33737721 - 33737634
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||| |||||||||  || ||||||||||| || ||||   |||  ||||||||||||| |||||||| |||||||||| ||||    
T  33737721 tgtttggaatgacttattcgagtttatctattgacataaacacttgtgcaactgtttgagagaacttatgaacacaacttatggcatg 33737634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 1575982 - 1575928
Alignment:
Q  308 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||||||||||||||||||  | |||| |||||| |||||||||| ||||    
T  1575982 cttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 2727896 - 2727934
Alignment:
Q  365 tctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  2727896 tctctaggatagcttatgaaaacaacttatagcttatat 2727934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 356
Target Start/End: Complemental strand, 4081013 - 4080955
Alignment:
Q  298 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||  |||||||||||||||||| ||||  | ||||||||||| |||||||||    
T  4081013 tttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttattt 4080955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 388
Target Start/End: Original strand, 4324423 - 4324516
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||| ||||| |||||||||||||||||| || |||  || ||| | |||||||  |||| || || ||||||| |||||||||||    
T  4324423 actgtttgagagaacttat-aaaacaacttatgacatgtccctaaactgcttttagcttatttgcataagttttccaggatagcttatgaaaaca 4324516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 5566150 - 5566208
Alignment:
Q  298 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||| ||||||| ||||||||| ||||| ||||| || ||||||||||| |||||||||    
T  5566150 tttgtgagagctaatgaaaacagcttattacatgtccataagttgttttcaacttattt 5566208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 33116690 - 33116648
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||| ||  |||||||||||||||||||||||    
T  33116690 gtgagactgtttgagggaatttatgaaaacaacttatgacatg 33116648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 781472 - 781371
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctc-taggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||||||||||| |||||||||| |||| |  |||||| | | ||||| |||||  |||| || |||| |||||||||| |  ||||||||||||    
T  781472 agagcttatgaaaacaaattatgacatgtccgtcaactgttttcagcatatttctataagctctcttaagataatttatgaaaaaagcttatagcttata 781373  T
Q  403 tt 404  Q
    ||    
T  781372 tt 781371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 3528884 - 3528811
Alignment:
Q  314 aaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaac 387  Q
    |||||||||||||||||| || ||| ||||||| | |||||||| ||||  |||| | ||||||| ||||||||    
T  3528884 aaaacaacttatgacatgtccataacttgttttcatcttattttcataagctctccaagatagttcatgaaaac 3528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 5731675 - 5731618
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    |||||| ||||||  |||||||||||||| | ||||||| ||| ||||||||||||||    
T  5731675 gtgagagtgtttggtagagcttatgaaaatagcttatgatatgtccgtaagttgtttt 5731618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 402
Target Start/End: Original strand, 20671905 - 20671942
Alignment:
Q  365 tctctaggatagtttatgaaaacaatttatagcttata 402  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  20671905 tctctatgatagtttatgaaaacaatttaaagcttata 20671942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 31338073 - 31338040
Alignment:
Q  298 tttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||| |||||||||||||||||||||||||||||    
T  31338073 tttgtgagagcttatgaaaacaacttatgacatg 31338040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 31594356 - 31594405
Alignment:
Q  297 gtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||| ||||| ||||||||||||||||| || ||| |||||||    
T  31594356 gtttgagagaggttatggaaacaacttatgacatgtccttaatttgtttt 31594405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 31671087 - 31671152
Alignment:
Q  338 agttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||||||||| | |||||||| ||||  | |||||||||||||| |||||||  |||||||||||||    
T  31671087 agttgttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatat 31671152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 33498724 - 33498683
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||| ||||  ||||||||||||||||||||||||||||    
T  33498724 tgagactttttggtagagcttatgaaaacaacttatgacatg 33498683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 10272399 - 10272508
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 392  Q
    |||| |||| ||| ||||||  ||||||||||||||||| | |||||||||||| | |||||||| ||||  |||| | ||| | |||||||||||| ||    
T  10272399 gactatttgggagtgcttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaactt 10272498  T
Q  393 atagcttata 402  Q
    ||||||||||    
T  10272499 atagcttata 10272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 4619808 - 4619692
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 393  Q
    |||||||| |||||||||||||||||||| ||||||||  | |||| || ||| | |||||||  |||| ||||| | ||||| ||||||| ||| ||||    
T  4619808 actgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagcttatgaagacagttta 4619709  T
Q  394 tagcttatattgaaaca 410  Q
    ||| |||||| ||||||    
T  4619708 tagattatatagaaaca 4619692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 41957430 - 41957514
Alignment:
Q  304 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||||| | ||||| ||||||||||| || ||||||||||| | |||||||| |||| ||||| ||||||| |||||||||||    
T  41957430 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaaca 41957514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 11297115 - 11297202
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||| ||||||||||||||||||||||| ||  || ||||   || ||||||||||| |||||||||| |||||||||| ||||||    
T  11297115 tgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatg 11297202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 37611179 - 37611282
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| |||||||||||||||||||||||||||| |||||||  | |||| |||||| |  ||||||  ||||  |||| | ||||| |||||||||||    
T  37611179 gtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37611278  T
Q  389 attt 392  Q
    ||||    
T  37611279 attt 37611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 37787909 - 37788012
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    |||||| |||||||||||||||||||||||||||| |||||||  | |||| |||||| |  ||||||  ||||  |||| | ||||| |||||||||||    
T  37787909 gtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37788008  T
Q  389 attt 392  Q
    ||||    
T  37788009 attt 37788012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 37526163 - 37526277
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    |||| |||||| | |||||||  ||||  |||| || | |  |||||||||||    
T  37526163 gtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaaca 37526262  T
Q  389 atttatagcttatat 403  Q
    | |||||||||||||    
T  37526263 acttatagcttatat 37526277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 37588324 - 37588438
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||    |||| |||||| | |||||||  ||||  |||| || |||  |||||||||||    
T  37588324 gtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaaca 37588423  T
Q  389 atttatagcttatat 403  Q
    | |||||||||||||    
T  37588424 acttatagcttatat 37588438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 13604825 - 13604886
Alignment:
Q  301 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 362  Q
    ||||||||||||||||||| ||||||||||| || || |||||||| |||||||||| ||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataa 13604886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 14295611 - 14295498
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |  |||| |||||| | |||| || || ||  |||| ||||||| ||| |||||||     
T  14295611 tgagactgtctgagagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacag 14295512  T
Q  390 tttatagcttatat 403  Q
     |||||||||||||    
T  14295511 cttatagcttatat 14295498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 392
Target Start/End: Original strand, 12242629 - 12242777
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    |||||| ||| |||||||| ||  |||||| ||  |||| |||  |||||| | |||||||||||||||| ||| |||||||||||||| | | ||||||    
T  12242629 tgtttgcattaacttatttgagactatctactggtatgagcatttgtgagattatttgagagagcttatggaaaaaacttatgacatgaacattagttgt 12242728  T
Q  344 tttaaacttatttttataacttctctaggatagtttatgaaaacaattt 392  Q
    ||| | |||| ||  ||||  |||| | ||||| |||||||||||||||    
T  12242729 tttcagcttacttccataagctctccaagatagcttatgaaaacaattt 12242777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 402
Target Start/End: Original strand, 37794679 - 37794774
Alignment:
Q  306 agcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||||||||||||||||||||  | |||| |||||| | |||||||  ||||| ||| |||||||| | ||||||| ||| |||||||||||    
T  37794679 agcttatgaaaacaacttatgacatgttcataagctgttttgagcttatttcgataac-tctataggatagctcatgaaaataatctatagcttata 37794774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 40159962 - 40159882
Alignment:
Q  251 attgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||| ||||||| | | || |||||  |||| ||||||||| ||||||||  ||||||||||||||||||    
T  40159962 attgacttatttaagtttatctacttacataaacatgtgtgatactgtttgaaagagcttagaaaaacaacttatgacatg 40159882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 12459920 - 12460007
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||||||||  ||||||||  ||| || | ||   ||||||||||||| |||| | ||||||||||||||||||||||    
T  12459920 tgtttggattgacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatg 12460007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 402
Target Start/End: Complemental strand, 15246933 - 15246826
Alignment:
Q  296 tgtttgagagagcttatgaaaacaacttatgacatgac-cgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttat 394  Q
    |||||| |||| ||||||||| ||||||||||||| |  | |||||| |||  ||||||||||||| | ||||||| ||||| |||||||||||  | ||    
T  15246933 tgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttatttttatcatttctctaagatagcttatgaaaacagctcat 15246834  T
Q  395 agcttata 402  Q
    ||||||||    
T  15246833 agcttata 15246826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 29363100 - 29363057
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||||||||||||||||||||| || |||||||||||    
T  29363100 gagagcttatgaaaacaacttatgacatgcccataagttgtttt 29363057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 37690600 - 37690715
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggat-agtttatgaaaac 387  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    |||| |||||| | |||||||  ||||  |||| |  || | |||||||||||    
T  37690600 gtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaac 37690699  T
Q  388 aatttatagcttatat 403  Q
    || |||||||||||||    
T  37690700 aacttatagcttatat 37690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 403
Target Start/End: Complemental strand, 10391493 - 10391333
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||| ||||| |||||||||||||||||  ||  || | ||   |||||| ||||||  |||| |||| ||||||  |||||||||| |  | ||||||    
T  10391493 tgtttcgattggcttatttaagcttatctgctggcataatcacttgtgagattgtttggaagagtttataaaaacactttatgacatgtctattagttgt 10391394  T
Q  344 tttaaacttattt--ttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||| |||||||||  ||| |||| ||||||||||| |||| ||||||| |||||||||||||    
T  10391393 tttcaacttatttccttaaaact-ctctaggatagcttataaaaacaaattatagcttatat 10391333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 7674754 - 7674641
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 388  Q
    ||||||||| |||  ||| |||||| |||||||||||||||||    |||| |||||| | |||||||| | || ||||| | ||||| |||||||||||    
T  7674754 gtgagactgcttggaagaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaaca 7674655  T
Q  389 atttatagcttata 402  Q
     ||||| |||||||    
T  7674654 ttttatggcttata 7674641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 470
Target Start/End: Complemental strand, 35960516 - 35960338
Alignment:
Q  292 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 391  Q
    ||||| |||||||||||||||| || ||||||| |||||| || |||| |||||| | ||||||| | ||   | || ||||||| |||||||| ||| |    
T  35960516 agactatttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaact 35960417  T
Q  392 tatagcttatattgaaaca--ctgactttatttttatatttcattatggaaatagcttatgagtaagtacttaaatgataa 470  Q
    ||||| ||||| ||||| |   |||||||| |||||| ||| ||||| ||||||| |||||  ||| |||||| |||||||    
T  35960416 tatagtttata-tgaaatagtttgacttta-ttttatcttttattatagaaatagtttatgcataaatacttatatgataa 35960338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 8090040 - 8090004
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatga 327  Q
    |||||| ||||||||||||||||||||||||||||||    
T  8090040 gagactatttgagagagcttatgaaaacaacttatga 8090004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 10125644 - 10125724
Alignment:
Q  251 attgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||| |||||||||||||||||| ||| |||| ||   |||| | ||| ||||||| |||||| |||||||||||||||||    
T  10125644 attggcttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatg 10125724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 10152440 - 10152388
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 341  Q
    |||||||| |||  ||||||||||||||||||||||||||||| || ||||||    
T  10152440 gtgagactattttggagagcttatgaaaacaacttatgacatgtccataagtt 10152388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 315 - 403
Target Start/End: Original strand, 15003504 - 15003592
Alignment:
Q  315 aaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    |||||||||| ||||||  |||||||||||||  | ||||||  ||||  ||||| |||||| |||||||||| | |||||||||||||    
T  15003504 aaacaacttacgacatgttcgtaagttgttttcgatttatttccataagctctcttggatagcttatgaaaaccacttatagcttatat 15003592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 248 - 356
Target Start/End: Complemental strand, 38728549 - 38728441
Alignment:
Q  248 tggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttta 347  Q
    ||||||||| ||||| |||||||||||||  || ||||   ||| || |||||| ||||||||||||||| | |||||||||||  | |||| ||||||     
T  38728549 tggattgacatatttgagcttatctattggtataaacacctgtgtgattgtttgggagagcttatgaaaatagcttatgacatgctcctaagctgttttc 38728450  T
Q  348 aacttattt 356  Q
    | |||||||    
T  38728449 agcttattt 38728441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 499650 - 499737
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||||||||| |||||| ||| ||| || | ||   || || ||||||| |||| |||||||||||| |||||||||||    
T  499650 tgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatg 499737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 2568762 - 2568651
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 390  Q
    ||||||||||   ||| |||||||||||| ||||||||||   | |||||| |||| | |||||||| || |  |||| | ||||| ||||||||||||     
T  2568762 gagactgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaac 2568663  T
Q  391 ttatagcttata 402  Q
    ||||||||||||    
T  2568662 ttatagcttata 2568651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 403
Target Start/End: Complemental strand, 7319465 - 7319398
Alignment:
Q  336 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 403  Q
    ||||||| ||| | ||||||||||||| ||||| | ||||| ||| ||||||| ||||||||||||||    
T  7319465 taagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatat 7319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 396
Target Start/End: Complemental strand, 17368770 - 17368675
Alignment:
Q  301 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatag 396  Q
    |||||| ||||||||||||||||||||||||  | || |  ||||| | |||||||  ||||| |||| | ||||| |||||||||||| ||||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatag 17368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 376
Target Start/End: Original strand, 28586730 - 28586817
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatag 376  Q
    |||| |||||||| ||||||||||| ||| | ||||||||||  ||||||| |||||| | |||||||  ||||  ||||||||||||    
T  28586730 gtgaaactgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatag 28586817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 4273309 - 4273407
Alignment:
Q  257 ttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatt 355  Q
    |||||| ||||| |||||||  || |||||  |||||| ||||||||||| | |||| ||||| |||||||| || |  ||||||||||| ||||||||    
T  4273309 ttattttagcttgtctattggcataaacatttgtgagattgtttgagagaacctatggaaacagcttatgacttgtctataagttgttttcaacttatt 4273407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 10907484 - 10907442
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  10907484 gtgagactgtttggaagagcttatgaaaacaacttatgtcatg 10907442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 12407660 - 12407722
Alignment:
Q  255 acttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaa 317  Q
    |||||||| | |||||||||||| || ||||   ||||||| |||||||||||||||||||||    
T  12407660 acttatttgaacttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaa 12407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 12425630 - 12425564
Alignment:
Q  336 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 402  Q
    ||||||||||| |||||||||| |||| ||||| | ||||| || ||||||||  ||||||||||||    
T  12425630 taagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttata 12425564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 14980613 - 14980559
Alignment:
Q  291 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttt 345  Q
    |||||||||||||||||||||| ||||  ||||||||||||  | ||||||||||    
T  14980613 gagactgtttgagagagcttataaaaatgacttatgacatgtacataagttgttt 14980559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 29590594 - 29590660
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    ||||||||||||||  |||||||| | | |||||||||| || || ||||||||||| |||||||||    
T  29590594 tgagactgtttgagttagcttatggacaaaacttatgacttgtccataagttgttttcaacttattt 29590660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 31208623 - 31208505
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgt 343  Q
    ||||||||||||||||||| | || | ||| ||| || | ||  |||||||||||||| ||||| | || |||||||||||||  ||| ||||||  |||    
T  31208623 tgtttggattgacttatttgaactgaactactgacataagcacccgtgagactgtttgggagagttcataaaaacaacttatgtaatgtccgtaaactgt 31208524  T
Q  344 tttaaacttatttttataa 362  Q
    ||| | |||||||| ||||    
T  31208523 ttttagcttattttcataa 31208505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 35299916 - 35299878
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatga 282  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  35299916 tgtttggattgacttatttgagcttatctattgacatga 35299878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 38047847 - 38047885
Alignment:
Q  293 gactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  38047847 gactgtttgggagagcttatggaaacaacttatgacatg 38047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 305 - 346
Target Start/End: Complemental strand, 5531124 - 5531083
Alignment:
Q  305 gagcttatgaaaacaacttatgacatgaccgtaagttgtttt 346  Q
    ||||||||||||||||||||||| ||| || |||||||||||    
T  5531124 gagcttatgaaaacaacttatgatatgtccataagttgtttt 5531083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 341
Target Start/End: Original strand, 11095414 - 11095511
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 341  Q
    |||||||| ||  ||||||||||||||||| ||| || ||||   |||| | ||||||||||| ||| || ||||| ||||||||||| || ||||||    
T  11095414 tgtttggactggtttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataagtt 11095511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 13244482 - 13244551
Alignment:
Q  256 cttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttat 325  Q
    ||||||| || |||||||||||||| ||||    ||| ||||||||  ||||||||||||||||||||||    
T  13244482 cttatttgagtttatctattgaaataaacacttatgacactgtttggaagagcttatgaaaacaacttat 13244551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 29336736 - 29336699
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatg 326  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  29336736 gtgagactgattgagagagcttatggaaacaacttatg 29336699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 30269711 - 30269764
Alignment:
Q  303 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||| |||||||||||| ||||| || ||||||||||| | |||||||    
T  30269711 gagagcttattaaaacaacttataacatgcccataagttgtttttagcttattt 30269764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 6697 - 6611
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||||||||||| ||||||| |||||  || | ||   ||||||| ||||||||||| |||||||||||| |||||||||    
T  6697 tgtttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagagagattatgaaaacaagttatgacat 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 6695 - 6609
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacat 330  Q
    ||||||||||||||||||| ||||||| |||||  || | ||   ||||||| ||||||||||| |||||||||||| |||||||||    
T  6695 tgtttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagagagattatgaaaacaagttatgacat 6609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 10581 - 10648
Alignment:
Q  289 gtgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||||||| | |||||||| |||||||| |||||||| || ||||||||||| | |||||||    
T  10581 gtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttattt 10648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 9606 - 9669
Alignment:
Q  294 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 357  Q
    ||||||||||||| |||||||||||||||||| |||||  | |||| |||||| | ||||||||    
T  9606 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttatttt 9669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 996 - 1071
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaaca 319  Q
    ||||||||||||||||| | |||||||||||||  || || | | ||||| |||||||  ||||||||||||||||    
T  996 tgtttggattgacttatgttagcttatctattgtcataaatacatgtgagtctgtttggaagagcttatgaaaaca 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 319
Target Start/End: Complemental strand, 2979 - 2904
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaaca 319  Q
    ||||||||||||||||| | |||||||||||||  || || | | ||||| |||||||  ||||||||||||||||    
T  2979 tgtttggattgacttatgttagcttatctattgtcataaatacatgtgagtctgtttggaagagcttatgaaaaca 2904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 306431 - 306332
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 389  Q
    ||||||| || ||| | ||||||| ||||| ||||||||||| || |||| |||||| | |||| ||  ||||  |||||||||||| ||||||||||||    
T  306431 tgagactcttcgagtgcgcttatggaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaa 306332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 27681 - 27615
Alignment:
Q  290 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 356  Q
    |||||||||||| ||||||||||| ||| | ||||||||||| |  ||||||||||| | |||||||    
T  27681 tgagactgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagcttattt 27615  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 11480 - 11568
Alignment:
Q  244 tgtttggattgacttatttaagcttatctattg---aaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 331  Q
    ||||||||||||| |||||||| |||||| |||   ||| |||| |||  |||||| ||||||||| || |||||||||||||||| ||||    
T  11480 tgtttggattgacatatttaagtttatcttttgtacaaaagaacttac--gagactctttgagagaactcatgaaaacaacttatggcatg 11568  T

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