View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5938_low_6 (Length: 249)

Name: NF5938_low_6
Description: NF5938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5938_low_6
NF5938_low_6
[»] chr8 (73 HSPs)
chr8 (17-232)||(26627801-26628017)
chr8 (17-102)||(35584120-35584205)
chr8 (17-96)||(29917874-29917953)
chr8 (17-102)||(20671286-20671371)
chr8 (20-113)||(25118805-25118898)
chr8 (20-105)||(42786047-42786132)
chr8 (20-102)||(44887664-44887746)
chr8 (20-104)||(25691546-25691630)
chr8 (20-104)||(30464460-30464544)
chr8 (20-87)||(7603352-7603419)
chr8 (20-103)||(14378635-14378718)
chr8 (20-70)||(23437762-23437812)
chr8 (20-70)||(25009206-25009256)
chr8 (20-70)||(27301924-27301974)
chr8 (20-70)||(30653422-30653472)
chr8 (20-70)||(44947079-44947129)
chr8 (20-77)||(7431268-7431325)
chr8 (20-76)||(120440-120496)
chr8 (20-64)||(4327068-4327112)
chr8 (20-64)||(5777503-5777547)
chr8 (18-70)||(8496833-8496885)
chr8 (17-117)||(9459238-9459338)
chr8 (18-102)||(17523835-17523919)
chr8 (18-70)||(37094194-37094246)
chr8 (20-64)||(38842231-38842275)
chr8 (18-70)||(43049216-43049268)
chr8 (20-64)||(44039893-44039937)
chr8 (20-63)||(3466352-3466395)
chr8 (20-63)||(13888579-13888622)
chr8 (20-70)||(4960213-4960263)
chr8 (20-70)||(8058973-8059023)
chr8 (20-70)||(21132877-21132927)
chr8 (18-64)||(40035355-40035401)
chr8 (20-70)||(43184728-43184778)
chr8 (18-63)||(1645353-1645398)
chr8 (20-104)||(761578-761662)
chr8 (20-64)||(15870243-15870287)
chr8 (18-70)||(18419060-18419112)
chr8 (20-64)||(23547136-23547180)
chr8 (20-64)||(29616275-29616319)
chr8 (22-70)||(36632144-36632192)
chr8 (20-79)||(8350933-8350992)
chr8 (20-79)||(13138185-13138244)
chr8 (20-70)||(12893677-12893727)
chr8 (20-70)||(18809425-18809475)
chr8 (17-70)||(1156524-1156577)
chr8 (21-70)||(44361983-44362032)
chr8 (20-64)||(25256482-25256526)
chr8 (20-60)||(39361274-39361314)
chr8 (20-52)||(44871411-44871443)
chr8 (20-79)||(1580818-1580877)
chr8 (20-79)||(2986474-2986533)
chr8 (20-51)||(8123719-8123750)
chr8 (20-63)||(9615592-9615635)
chr8 (20-63)||(14511909-14511952)
chr8 (31-82)||(20671206-20671257)
chr8 (20-75)||(25173726-25173781)
chr8 (20-63)||(29708630-29708673)
chr8 (20-63)||(32909124-32909167)
chr8 (20-63)||(38036807-38036850)
chr8 (20-70)||(886131-886181)
chr8 (20-70)||(2026634-2026684)
chr8 (20-50)||(21133020-21133050)
chr8 (31-69)||(42948261-42948299)
chr8 (17-70)||(14847355-14847408)
chr8 (20-57)||(16345252-16345289)
chr8 (20-61)||(32061250-32061291)
chr8 (31-64)||(40645677-40645710)
chr8 (20-60)||(9302425-9302465)
chr8 (20-96)||(11335375-11335451)
chr8 (20-64)||(23764517-23764561)
chr8 (20-64)||(31127873-31127917)
chr8 (20-64)||(44123819-44123863)
[»] chr7 (71 HSPs)
chr7 (20-116)||(40348556-40348652)
chr7 (18-77)||(23734225-23734284)
chr7 (20-70)||(4088788-4088838)
chr7 (20-70)||(35265773-35265823)
chr7 (20-102)||(37100978-37101060)
chr7 (20-119)||(46074365-46074466)
chr7 (20-104)||(16807098-16807182)
chr7 (20-104)||(38069079-38069163)
chr7 (20-63)||(31496597-31496640)
chr7 (20-63)||(32222619-32222662)
chr7 (20-70)||(9173288-9173338)
chr7 (20-70)||(26651161-26651211)
chr7 (20-70)||(28016177-28016227)
chr7 (20-70)||(38353550-38353600)
chr7 (20-102)||(38850732-38850814)
chr7 (20-110)||(40231950-40232040)
chr7 (20-104)||(4033437-4033521)
chr7 (20-64)||(38198630-38198674)
chr7 (18-102)||(38441843-38441927)
chr7 (20-63)||(33376844-33376887)
chr7 (20-79)||(38498766-38498825)
chr7 (23-70)||(40089602-40089649)
chr7 (20-102)||(4620097-4620178)
chr7 (20-70)||(9136614-9136664)
chr7 (20-70)||(30462173-30462223)
chr7 (20-70)||(46657782-46657832)
chr7 (20-104)||(25273969-25274053)
chr7 (20-64)||(35693782-35693826)
chr7 (20-64)||(48448586-48448630)
chr7 (23-70)||(3124101-3124148)
chr7 (20-79)||(3680401-3680460)
chr7 (20-63)||(26190317-26190360)
chr7 (27-70)||(42493579-42493622)
chr7 (18-64)||(19327383-19327429)
chr7 (18-52)||(47713382-47713416)
chr7 (20-77)||(5887895-5887952)
chr7 (20-113)||(18795159-18795252)
chr7 (20-85)||(21392167-21392232)
chr7 (17-62)||(27248794-27248839)
chr7 (20-101)||(42086669-42086750)
chr7 (20-64)||(5842185-5842229)
chr7 (20-64)||(9821235-9821279)
chr7 (20-64)||(10723160-10723204)
chr7 (20-117)||(14201526-14201625)
chr7 (20-64)||(27621247-27621291)
chr7 (20-52)||(29247707-29247739)
chr7 (18-70)||(40665718-40665770)
chr7 (23-63)||(47080686-47080726)
chr7 (31-70)||(7314308-7314347)
chr7 (20-75)||(7461008-7461063)
chr7 (23-70)||(23348418-23348465)
chr7 (20-79)||(31466411-31466470)
chr7 (20-63)||(36404878-36404921)
chr7 (20-79)||(47713555-47713614)
chr7 (20-79)||(48531471-48531530)
chr7 (20-70)||(10464177-10464227)
chr7 (20-70)||(35500809-35500859)
chr7 (20-70)||(36643311-36643361)
chr7 (20-70)||(36819845-36819895)
chr7 (20-70)||(36859270-36859320)
chr7 (20-70)||(37231625-37231675)
chr7 (18-64)||(38259552-38259598)
chr7 (20-70)||(41007908-41007958)
chr7 (23-61)||(46242433-46242471)
chr7 (33-70)||(18756661-18756698)
chr7 (20-61)||(36901528-36901569)
chr7 (32-69)||(40818661-40818698)
chr7 (20-67)||(29255309-29255354)
chr7 (20-52)||(36819956-36819988)
chr7 (28-76)||(39982173-39982221)
chr7 (20-52)||(41844849-41844881)
[»] chr2 (72 HSPs)
chr2 (17-101)||(37806813-37806897)
chr2 (17-117)||(43409431-43409531)
chr2 (23-116)||(27667974-27668067)
chr2 (20-104)||(10333529-10333613)
chr2 (20-113)||(18504491-18504584)
chr2 (20-104)||(7724562-7724646)
chr2 (20-104)||(8373462-8373546)
chr2 (20-104)||(12209017-12209101)
chr2 (20-104)||(38963823-38963907)
chr2 (20-104)||(41436860-41436944)
chr2 (20-63)||(25762263-25762306)
chr2 (18-104)||(31603365-31603451)
chr2 (20-69)||(45036426-45036475)
chr2 (20-64)||(4137477-4137521)
chr2 (18-70)||(6730052-6730104)
chr2 (20-64)||(25766512-25766556)
chr2 (18-70)||(43328750-43328802)
chr2 (20-63)||(15771033-15771076)
chr2 (20-103)||(44022297-44022380)
chr2 (24-70)||(6075187-6075233)
chr2 (20-70)||(8896333-8896383)
chr2 (20-70)||(15177431-15177481)
chr2 (20-70)||(16126033-16126083)
chr2 (20-102)||(16127731-16127813)
chr2 (17-63)||(25277881-25277927)
chr2 (20-110)||(40471758-40471848)
chr2 (31-96)||(33046198-33046263)
chr2 (20-96)||(2831743-2831819)
chr2 (20-104)||(5030312-5030396)
chr2 (20-64)||(5096316-5096360)
chr2 (18-70)||(22718492-22718544)
chr2 (24-64)||(32776160-32776200)
chr2 (20-64)||(37987887-37987931)
chr2 (20-75)||(2543893-2543948)
chr2 (20-79)||(24283013-24283072)
chr2 (20-75)||(30708877-30708932)
chr2 (20-70)||(16333542-16333592)
chr2 (20-70)||(37316938-37316988)
chr2 (20-101)||(3987263-3987344)
chr2 (20-64)||(11383996-11384040)
chr2 (18-70)||(16646308-16646360)
chr2 (20-64)||(25627091-25627135)
chr2 (20-64)||(41575630-41575674)
chr2 (20-63)||(1749123-1749166)
chr2 (20-63)||(7601348-7601391)
chr2 (20-63)||(9273422-9273465)
chr2 (20-79)||(9877136-9877195)
chr2 (17-64)||(16180235-16180282)
chr2 (27-70)||(20682716-20682759)
chr2 (20-63)||(20917878-20917921)
chr2 (22-53)||(21271786-21271817)
chr2 (21-64)||(22897047-22897090)
chr2 (20-79)||(39418073-39418132)
chr2 (20-51)||(41319875-41319906)
chr2 (20-79)||(42038672-42038731)
chr2 (20-70)||(1110441-1110491)
chr2 (24-70)||(7470050-7470096)
chr2 (22-64)||(13399173-13399215)
chr2 (20-70)||(20517567-20517617)
chr2 (20-70)||(23671525-23671575)
chr2 (24-70)||(23873227-23873273)
chr2 (20-70)||(38137593-38137643)
chr2 (20-70)||(40598278-40598328)
chr2 (20-62)||(41463587-41463629)
chr2 (31-80)||(19192710-19192759)
chr2 (21-70)||(23886840-23886889)
chr2 (20-61)||(36931683-36931724)
chr2 (21-70)||(42006144-42006193)
chr2 (27-79)||(4045286-4045338)
chr2 (24-77)||(22700970-22701025)
chr2 (20-60)||(28452837-28452877)
chr2 (20-64)||(43925142-43925186)
[»] scaffold0028 (1 HSPs)
scaffold0028 (14-104)||(25283-25372)
[»] chr5 (72 HSPs)
chr5 (18-102)||(32473972-32474056)
chr5 (20-102)||(30721637-30721719)
chr5 (23-104)||(35641797-35641878)
chr5 (20-104)||(19344651-19344735)
chr5 (20-70)||(31191129-31191179)
chr5 (20-104)||(1098203-1098287)
chr5 (20-104)||(13548241-13548325)
chr5 (20-64)||(14057776-14057820)
chr5 (20-104)||(20022888-20022972)
chr5 (20-104)||(20040367-20040451)
chr5 (18-70)||(39104229-39104281)
chr5 (20-70)||(1781097-1781147)
chr5 (17-63)||(5985008-5985054)
chr5 (20-70)||(9936840-9936890)
chr5 (20-70)||(28142990-28143040)
chr5 (20-70)||(30211693-30211743)
chr5 (20-70)||(41263081-41263131)
chr5 (30-116)||(17407290-17407378)
chr5 (20-96)||(14355535-14355611)
chr5 (20-104)||(14633035-14633119)
chr5 (20-64)||(33402543-33402587)
chr5 (20-64)||(40316886-40316930)
chr5 (20-64)||(41410611-41410655)
chr5 (17-64)||(25946198-25946245)
chr5 (20-87)||(40080026-40080093)
chr5 (20-70)||(14607509-14607559)
chr5 (18-64)||(27675608-27675654)
chr5 (20-70)||(30788267-30788317)
chr5 (20-70)||(34169891-34169941)
chr5 (20-64)||(1831419-1831463)
chr5 (18-70)||(4701179-4701231)
chr5 (20-96)||(6734817-6734893)
chr5 (20-64)||(20503000-20503044)
chr5 (20-63)||(27674286-27674329)
chr5 (20-67)||(967257-967306)
chr5 (20-70)||(970287-970337)
chr5 (20-70)||(4299895-4299945)
chr5 (20-70)||(13985731-13985781)
chr5 (20-70)||(30779808-30779858)
chr5 (20-70)||(41042789-41042839)
chr5 (18-63)||(30352021-30352066)
chr5 (17-113)||(32382065-32382162)
chr5 (20-64)||(1918782-1918826)
chr5 (20-64)||(2551579-2551623)
chr5 (20-64)||(2864103-2864147)
chr5 (20-64)||(4152262-4152306)
chr5 (18-70)||(8627197-8627249)
chr5 (18-70)||(10465245-10465297)
chr5 (22-70)||(26802055-26802103)
chr5 (22-70)||(26809605-26809653)
chr5 (22-70)||(26824632-26824680)
chr5 (23-63)||(27477693-27477733)
chr5 (20-64)||(39035628-39035672)
chr5 (20-52)||(39925284-39925316)
chr5 (20-79)||(5212975-5213034)
chr5 (20-63)||(14639667-14639710)
chr5 (19-62)||(21213712-21213755)
chr5 (20-79)||(39894930-39894989)
chr5 (20-79)||(40512733-40512792)
chr5 (20-63)||(40797024-40797067)
chr5 (26-116)||(4087612-4087702)
chr5 (20-70)||(16048234-16048284)
chr5 (20-70)||(22613771-22613821)
chr5 (20-70)||(37516294-37516344)
chr5 (20-70)||(39036559-39036609)
chr5 (20-70)||(39405913-39405963)
chr5 (20-70)||(41411219-41411269)
chr5 (24-61)||(2799703-2799740)
chr5 (24-61)||(2805869-2805906)
chr5 (27-79)||(5364580-5364632)
chr5 (20-64)||(19868754-19868798)
chr5 (30-70)||(43067380-43067420)
[»] chr4 (72 HSPs)
chr4 (20-107)||(43047412-43047499)
chr4 (20-114)||(14958148-14958242)
chr4 (20-70)||(18881308-18881358)
chr4 (20-70)||(37164078-37164128)
chr4 (18-70)||(6520497-6520549)
chr4 (20-104)||(31152689-31152773)
chr4 (20-104)||(39170986-39171070)
chr4 (20-104)||(43447193-43447277)
chr4 (20-104)||(55631826-55631910)
chr4 (24-119)||(32154839-32154933)
chr4 (20-87)||(39195535-39195602)
chr4 (20-70)||(1613169-1613219)
chr4 (20-70)||(4271965-4272015)
chr4 (18-64)||(29424714-29424760)
chr4 (20-70)||(37667725-37667775)
chr4 (20-70)||(39260414-39260464)
chr4 (20-70)||(47834095-47834145)
chr4 (20-70)||(53987731-53987781)
chr4 (18-70)||(31657305-31657357)
chr4 (20-104)||(46608241-46608325)
chr4 (20-64)||(54803009-54803053)
chr4 (20-116)||(55291088-55291184)
chr4 (21-64)||(3708321-3708364)
chr4 (23-70)||(42185336-42185383)
chr4 (20-70)||(28914430-28914480)
chr4 (20-77)||(13203284-13203341)
chr4 (21-70)||(28909792-28909841)
chr4 (31-104)||(48380501-48380574)
chr4 (20-64)||(8525367-8525411)
chr4 (20-64)||(10384916-10384960)
chr4 (20-64)||(27976638-27976682)
chr4 (18-70)||(44210211-44210263)
chr4 (20-64)||(50684988-50685032)
chr4 (18-70)||(51306183-51306235)
chr4 (20-63)||(29844275-29844318)
chr4 (20-63)||(36662650-36662693)
chr4 (18-64)||(23605851-23605897)
chr4 (20-70)||(24505573-24505623)
chr4 (23-101)||(27982579-27982657)
chr4 (20-70)||(28988345-28988395)
chr4 (20-70)||(33394139-33394189)
chr4 (20-70)||(39332781-39332831)
chr4 (20-61)||(1981332-1981373)
chr4 (31-116)||(31486734-31486819)
chr4 (20-77)||(38715616-38715672)
chr4 (20-61)||(40411559-40411600)
chr4 (20-64)||(1348733-1348777)
chr4 (35-75)||(2711482-2711522)
chr4 (20-104)||(19170567-19170651)
chr4 (20-79)||(4209508-4209567)
chr4 (22-53)||(6234857-6234888)
chr4 (20-79)||(7738872-7738931)
chr4 (20-63)||(13848943-13848986)
chr4 (20-79)||(18360026-18360085)
chr4 (31-78)||(25678472-25678519)
chr4 (20-79)||(36602843-36602902)
chr4 (20-75)||(41790489-41790543)
chr4 (18-77)||(48336628-48336687)
chr4 (20-75)||(51737011-51737066)
chr4 (20-70)||(6923002-6923052)
chr4 (20-102)||(10181137-10181218)
chr4 (20-70)||(19525776-19525826)
chr4 (20-70)||(25644508-25644558)
chr4 (20-70)||(28166423-28166473)
chr4 (20-70)||(29821112-29821162)
chr4 (20-70)||(46803781-46803831)
chr4 (20-70)||(50033169-50033219)
chr4 (20-117)||(9965421-9965518)
chr4 (18-51)||(30386912-30386945)
chr4 (36-64)||(4701099-4701127)
chr4 (20-52)||(37588482-37588514)
chr4 (20-64)||(50035685-50035729)
[»] chr3 (87 HSPs)
chr3 (18-113)||(23631537-23631632)
chr3 (20-113)||(8437131-8437225)
chr3 (20-104)||(34555179-34555263)
chr3 (20-70)||(39099025-39099075)
chr3 (20-104)||(9484624-9484708)
chr3 (20-104)||(12948068-12948152)
chr3 (20-104)||(16434804-16434888)
chr3 (20-104)||(29455655-29455739)
chr3 (20-104)||(29793325-29793409)
chr3 (20-104)||(42098574-42098658)
chr3 (20-104)||(46866371-46866455)
chr3 (20-104)||(48927749-48927833)
chr3 (20-104)||(49076373-49076457)
chr3 (20-79)||(48690202-48690261)
chr3 (20-113)||(8440485-8440579)
chr3 (18-64)||(29809413-29809459)
chr3 (20-70)||(34263651-34263701)
chr3 (20-70)||(50673739-50673789)
chr3 (20-70)||(52094041-52094091)
chr3 (20-102)||(53055572-53055654)
chr3 (20-102)||(53274942-53275024)
chr3 (17-70)||(3086287-3086340)
chr3 (20-105)||(20080924-20081008)
chr3 (18-87)||(36364708-36364777)
chr3 (20-64)||(901035-901079)
chr3 (18-70)||(1778423-1778475)
chr3 (18-70)||(4945796-4945848)
chr3 (20-64)||(18013417-18013461)
chr3 (18-70)||(26759541-26759593)
chr3 (22-70)||(32961308-32961356)
chr3 (20-64)||(34669676-34669720)
chr3 (18-70)||(34680243-34680295)
chr3 (20-64)||(36179083-36179127)
chr3 (18-70)||(38878423-38878475)
chr3 (18-70)||(50888407-50888459)
chr3 (20-75)||(18971498-18971553)
chr3 (20-102)||(36594365-36594448)
chr3 (14-105)||(42247139-42247230)
chr3 (20-70)||(2643216-2643266)
chr3 (20-70)||(28958946-28958996)
chr3 (20-70)||(43394505-43394555)
chr3 (11-77)||(54684606-54684672)
chr3 (17-102)||(935061-935146)
chr3 (17-70)||(5504944-5504997)
chr3 (20-113)||(31787100-31787192)
chr3 (23-67)||(33462770-33462814)
chr3 (30-118)||(44057540-44057628)
chr3 (20-64)||(47340031-47340075)
chr3 (18-70)||(49818819-49818871)
chr3 (24-87)||(1325498-1325561)
chr3 (20-63)||(10819390-10819433)
chr3 (20-75)||(48143912-48143967)
chr3 (20-70)||(32951198-32951248)
chr3 (17-70)||(36665164-36665217)
chr3 (31-96)||(38833923-38833988)
chr3 (20-64)||(1334242-1334286)
chr3 (20-64)||(4229135-4229179)
chr3 (20-64)||(4464949-4464993)
chr3 (22-70)||(10228678-10228726)
chr3 (20-52)||(14751008-14751040)
chr3 (20-64)||(30681924-30681968)
chr3 (20-52)||(35322348-35322380)
chr3 (20-64)||(54673927-54673971)
chr3 (20-63)||(12250372-12250415)
chr3 (24-63)||(21489987-21490026)
chr3 (20-82)||(28228995-28229054)
chr3 (20-63)||(29720464-29720507)
chr3 (31-82)||(35135768-35135819)
chr3 (27-70)||(38492207-38492250)
chr3 (20-79)||(38833812-38833871)
chr3 (22-53)||(46763954-46763985)
chr3 (20-79)||(51062539-51062598)
chr3 (20-70)||(1327461-1327511)
chr3 (20-70)||(7671375-7671425)
chr3 (20-70)||(17053013-17053063)
chr3 (20-70)||(27849100-27849150)
chr3 (20-70)||(37833049-37833099)
chr3 (24-70)||(46818340-46818386)
chr3 (20-60)||(5030061-5030102)
chr3 (22-63)||(9997829-9997870)
chr3 (22-63)||(10232434-10232475)
chr3 (20-77)||(35717910-35717967)
chr3 (20-77)||(37166537-37166594)
chr3 (20-101)||(48706877-48706958)
chr3 (20-52)||(3817803-3817835)
chr3 (20-64)||(49058005-49058049)
chr3 (18-70)||(53019890-53019942)
[»] chr1 (76 HSPs)
chr1 (20-95)||(43453121-43453196)
chr1 (20-116)||(32968129-32968225)
chr1 (20-104)||(50295892-50295976)
chr1 (20-104)||(52749309-52749393)
chr1 (20-102)||(31651857-31651939)
chr1 (14-82)||(4055345-4055414)
chr1 (17-102)||(48896949-48897034)
chr1 (20-104)||(10100469-10100553)
chr1 (20-70)||(1821584-1821634)
chr1 (20-70)||(6017405-6017455)
chr1 (20-70)||(7075286-7075336)
chr1 (20-70)||(23337869-23337919)
chr1 (20-70)||(44741405-44741455)
chr1 (21-70)||(47912343-47912392)
chr1 (20-64)||(2138985-2139029)
chr1 (20-80)||(3555256-3555316)
chr1 (20-64)||(5606347-5606391)
chr1 (20-64)||(5945833-5945877)
chr1 (18-70)||(8048702-8048754)
chr1 (20-104)||(10124137-10124221)
chr1 (18-70)||(28490222-28490274)
chr1 (18-70)||(41855675-41855727)
chr1 (18-70)||(44240581-44240633)
chr1 (20-104)||(45299346-45299430)
chr1 (18-70)||(48389128-48389180)
chr1 (20-64)||(49903641-49903685)
chr1 (20-71)||(4489122-4489173)
chr1 (20-70)||(26543930-26543980)
chr1 (20-70)||(31932134-31932184)
chr1 (20-70)||(33526118-33526168)
chr1 (20-102)||(44452225-44452307)
chr1 (20-70)||(50014517-50014567)
chr1 (17-102)||(27581022-27581107)
chr1 (20-77)||(32495193-32495250)
chr1 (23-64)||(36035754-36035795)
chr1 (20-64)||(38786902-38786946)
chr1 (18-70)||(41414265-41414317)
chr1 (23-102)||(2612034-2612113)
chr1 (31-118)||(31698597-31698684)
chr1 (20-111)||(31971408-31971499)
chr1 (17-64)||(33033314-33033361)
chr1 (20-66)||(3277635-3277681)
chr1 (20-70)||(5117390-5117440)
chr1 (20-70)||(9334443-9334493)
chr1 (20-70)||(9358216-9358266)
chr1 (20-70)||(23393294-23393344)
chr1 (20-70)||(26441783-26441833)
chr1 (20-102)||(27990745-27990827)
chr1 (23-117)||(30005766-30005860)
chr1 (19-80)||(31427492-31427554)
chr1 (22-63)||(48312097-48312138)
chr1 (20-70)||(52688591-52688643)
chr1 (23-55)||(3910903-3910935)
chr1 (20-104)||(23569702-23569786)
chr1 (17-61)||(38681320-38681364)
chr1 (17-64)||(4605145-4605192)
chr1 (20-51)||(10648154-10648185)
chr1 (23-70)||(26345362-26345409)
chr1 (22-53)||(43590911-43590942)
chr1 (20-63)||(44963628-44963671)
chr1 (20-51)||(51924926-51924957)
chr1 (20-70)||(16265182-16265232)
chr1 (20-70)||(16266311-16266361)
chr1 (20-70)||(24982500-24982550)
chr1 (20-58)||(27462812-27462850)
chr1 (20-50)||(40058923-40058953)
chr1 (18-64)||(40883479-40883525)
chr1 (20-70)||(43680219-43680269)
chr1 (20-113)||(3529325-3529418)
chr1 (20-61)||(12685853-12685894)
chr1 (29-118)||(22328124-22328208)
chr1 (20-101)||(37281241-37281322)
chr1 (20-61)||(37515486-37515527)
chr1 (20-77)||(38644164-38644221)
chr1 (20-101)||(48219673-48219754)
chr1 (23-75)||(42915289-42915341)
[»] chr6 (43 HSPs)
chr6 (20-104)||(2656626-2656710)
chr6 (20-70)||(995625-995675)
chr6 (23-117)||(12869373-12869467)
chr6 (20-104)||(2667281-2667365)
chr6 (20-120)||(17417670-17417770)
chr6 (20-104)||(24798502-24798586)
chr6 (20-104)||(24825193-24825277)
chr6 (20-96)||(30699297-30699373)
chr6 (23-118)||(16434557-16434652)
chr6 (20-114)||(19788595-19788690)
chr6 (20-75)||(24693195-24693250)
chr6 (20-70)||(2397832-2397882)
chr6 (20-70)||(4890082-4890132)
chr6 (20-70)||(32541433-32541483)
chr6 (20-109)||(29514982-29515071)
chr6 (18-63)||(31708962-31709007)
chr6 (20-64)||(2141636-2141680)
chr6 (20-64)||(6142463-6142507)
chr6 (20-104)||(9022868-9022952)
chr6 (20-102)||(16661558-16661640)
chr6 (24-102)||(33973539-33973617)
chr6 (42-120)||(34500885-34500963)
chr6 (27-104)||(17496281-17496358)
chr6 (17-70)||(25163310-25163363)
chr6 (20-64)||(10105879-10105923)
chr6 (23-70)||(16969440-16969487)
chr6 (20-114)||(19762288-19762383)
chr6 (20-70)||(10109367-10109417)
chr6 (23-77)||(16120833-16120887)
chr6 (20-70)||(32673810-32673860)
chr6 (20-77)||(17179354-17179410)
chr6 (20-64)||(6188612-6188656)
chr6 (20-63)||(2912966-2913009)
chr6 (20-79)||(16696069-16696128)
chr6 (20-79)||(18992052-18992111)
chr6 (20-70)||(13207015-13207065)
chr6 (35-113)||(13358528-13358606)
chr6 (20-70)||(24150890-24150940)
chr6 (20-70)||(29986220-29986270)
chr6 (20-70)||(31948598-31948647)
chr6 (28-70)||(35117342-35117384)
chr6 (20-64)||(28483106-28483149)
chr6 (20-64)||(29795519-29795562)
[»] scaffold0001 (1 HSPs)
scaffold0001 (20-110)||(183988-184078)
[»] scaffold0024 (1 HSPs)
scaffold0024 (20-97)||(36466-36543)
[»] scaffold0221 (1 HSPs)
scaffold0221 (20-104)||(5404-5488)
[»] scaffold0687 (1 HSPs)
scaffold0687 (20-87)||(1034-1101)
[»] scaffold0500 (1 HSPs)
scaffold0500 (20-70)||(627-677)
[»] scaffold0283 (1 HSPs)
scaffold0283 (20-70)||(3057-3107)
[»] scaffold0281 (1 HSPs)
scaffold0281 (17-70)||(13166-13219)
[»] scaffold1248 (1 HSPs)
scaffold1248 (23-70)||(1411-1458)
[»] scaffold0952 (1 HSPs)
scaffold0952 (23-70)||(855-902)
[»] scaffold0195 (1 HSPs)
scaffold0195 (20-70)||(197-247)
[»] scaffold0074 (1 HSPs)
scaffold0074 (23-101)||(45158-45236)
[»] scaffold0018 (1 HSPs)
scaffold0018 (26-64)||(145637-145675)
[»] scaffold0027 (1 HSPs)
scaffold0027 (20-101)||(117470-117551)
[»] scaffold0289 (1 HSPs)
scaffold0289 (20-60)||(9196-9236)
[»] scaffold0366 (1 HSPs)
scaffold0366 (20-79)||(14208-14267)
[»] scaffold0204 (1 HSPs)
scaffold0204 (18-77)||(24150-24209)
[»] scaffold0172 (1 HSPs)
scaffold0172 (20-63)||(19687-19730)
[»] scaffold0717 (1 HSPs)
scaffold0717 (18-64)||(4138-4184)
[»] scaffold0604 (1 HSPs)
scaffold0604 (20-70)||(1263-1313)
[»] scaffold0069 (1 HSPs)
scaffold0069 (22-96)||(4477-4551)
[»] scaffold0007 (1 HSPs)
scaffold0007 (53-101)||(1719-1767)


Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 26628017 - 26627801
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26628017 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagtcatctaata 26627918  T
Q  117 tgaacatagagagtattaaaccgccaaattgggccattacattccacgtgttccataatccattattaataaatataaactat-nnnnnnntgattatta 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||    
T  26627917 tgaacatagagagtattaaaccgccaaattgggccattacattccacgtgttccataatccattattaataaatataaactataaaaaaaatgattatta 26627818  T
Q  216 cttatcttctaaataat 232  Q
    |||||||||||||||||    
T  26627817 cttatcttctaaataat 26627801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 35584120 - 35584205
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| | |||| || ||| ||||||||||||    
T  35584120 aatatcttatatgatattatttatctttgtatattaatagaaaaatatgatcaaaatatattaggtcaataatgcacattgtcaaa 35584205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 29917874 - 29917953
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || |||| |||| ||||||||    
T  29917874 aatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattacacatt 29917953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 20671371 - 20671286
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| |||||||| |||||    
T  20671371 aatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaa 20671286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 25118898 - 25118805
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    ||||||||||||||||||||||||||||||||| |||||||| |  ||||| |||||| |||| |||| |||||||| ||||| |||| |||||    
T  25118898 atcttatatgatattatttatctttgtatattagtagaaaaagaaggtcaaaatatgttaggtcaaaagtacacattttcaaataagtcatcta 25118805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 42786047 - 42786132
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| || |||| |  | ||||||||||||    
T  42786047 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaatgtgtcaagtcaaaactgtaaattgtcaaacaa 42786132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 44887664 - 44887746
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || ||||||| |||| | |||||| |||||    
T  44887664 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagtcaggtcaaaattgcacattttcaaa 44887746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 25691546 - 25691630
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  25691546 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 25691630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 30464544 - 30464460
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  30464544 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 30464460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 7603419 - 7603352
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaa 87  Q
    ||||||||||||||||||||||||||||||||| || |||||||  ||||| ||||||||||| ||||    
T  7603419 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaaaa 7603352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 14378635 - 14378718
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaac 103  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||  || || |||| |||| | |||||| ||||||    
T  14378635 atcttatatgatattatttatctttatatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaac 14378718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 23437762 - 23437812
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  23437762 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 23437812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 25009256 - 25009206
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  25009256 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 25009206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 27301974 - 27301924
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  27301974 atcttatatgatattatttatctttgtatattagtagaaaaatattgtcaa 27301924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 30653472 - 30653422
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  30653472 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 30653422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 44947129 - 44947079
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44947129 atcttatatgatattatttatcttagtatattaatagaaaaatataatcaa 44947079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 7431268 - 7431325
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  7431268 atcttatatgatattatttatctttgtatattagtagaaaaatgtggtcaaaatatgt 7431325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 120440 - 120496
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatg 76  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||    
T  120440 atcttatatgatattatttatttttgtataataatagaaaaatatcgtcaaaatatg 120496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4327068 - 4327112
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  4327068 atcttatatgatattatttatctttgtatattagtagaaaaatat 4327112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5777503 - 5777547
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  5777503 atcttatatgatattatttatctttgtatattagtagaaaaatat 5777547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 8496833 - 8496885
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  8496833 atatcttatatgatattatttatctttgtatattcgtagaaaaatatggtcaa 8496885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 9459238 - 9459338
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||  | | |||  | || ||| |||||| ||||||| |||||||||||    
T  9459238 aatattttatatgatattatttatctttatatattagtagaaaaatataatcaaactttatcacatcaataatgcacattatcaaacatgttatctaata 9459337  T
Q  117 t 117  Q
    |    
T  9459338 t 9459338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 17523919 - 17523835
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||  ||||  || || ||||||||| | |||||| |||||    
T  17523919 atatcttatatgatattatttatctttgtatattagcagaaaaatatgatcaaagtaagttaggttaaaactgcacattttcaaa 17523835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 37094246 - 37094194
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  37094246 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 37094194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 38842275 - 38842231
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  38842275 atcttatatgatattatttatctttgtatattagtagaaaaatat 38842231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 43049216 - 43049268
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  43049216 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 43049268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 44039937 - 44039893
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  44039937 atcttatatgatattatttatctttgtatattagtagaaaaatat 44039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 3466395 - 3466352
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  3466395 atcttatatgatattatttatctttgtatattagtagaaaaata 3466352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 13888579 - 13888622
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  13888579 atcttatatgatattatttatctttgtatattagtagaaaaata 13888622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 4960263 - 4960213
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  4960263 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 4960213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 8058973 - 8059023
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  8058973 atcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaa 8059023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 21132877 - 21132927
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  21132877 atcttatatgatattatttttctttgtatattagtagaaaaatatggtcaa 21132927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 40035401 - 40035355
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  40035401 atatcttatatgatattatttatttttgtatattagtagaaaaatat 40035355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 43184728 - 43184778
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  43184728 atcttatatgatattatttatttttgtatattagtagaaaaatatggtcaa 43184778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 1645353 - 1645398
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  1645353 atatcttatatgatattatttatttttgtatattagtagaaaaata 1645398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 761662 - 761578
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| |||||  ||  | |||| |||| |||||||| |||||||    
T  761662 atcttatatgatattatttaaatttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattacacattttcaaaca 761578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 15870287 - 15870243
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  15870287 atcttatatgatattatttatttttgtatattagtagaaaaatat 15870243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 18419112 - 18419060
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||    
T  18419112 atatcttatatgatattatctatctatgtatattagtagaaaaatatggtcaa 18419060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 23547180 - 23547136
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    
T  23547180 atcttatataatattatttatctttgtatattagtagaaaaatat 23547136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 29616275 - 29616319
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  29616275 atcttatatgatattatttatctttgtatattagtagacaaatat 29616319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 36632144 - 36632192
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  36632144 cttatatgatattatttatctttttatattagtagaaaaatatggtcaa 36632192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 8350992 - 8350933
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| |||||||||||||||||| || |||||||||||||||| |||||  |||||||    
T  8350992 atcttacatgatattatttatctttctaaattaatagaaaaatatggtcaaagtatgtca 8350933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 13138244 - 13138185
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| ||||| ||||||||    
T  13138244 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtca 13138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 12893677 - 12893727
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||| |||||    
T  12893677 atcttacatgatattatttatctttgtaaattgatagaaaaatatggtcaa 12893727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 18809425 - 18809475
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  18809425 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaa 18809475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 1156524 - 1156577
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||| ||| ||||| | |||||||||| ||||||    
T  1156524 aatatcttatatgatattatttatttttatatatcagtagaaaaatacagtcaa 1156577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 44362032 - 44361983
Alignment:
Q  21 tcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||| ||||||||| |||||| |||| |||||    
T  44362032 tcttatatgatattatttatctatgtatattagtagaaatatatggtcaa 44361983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 25256482 - 25256526
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||    
T  25256482 atcttacatgatattatttatctttgtaaattagtagaaaaatat 25256526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 39361274 - 39361314
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaa 60  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  39361274 atcttatatgatattatttatctttgtgaattaatagaaaa 39361314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 44871443 - 44871411
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    |||||||||||||||||||||||||||||||||    
T  44871443 atcttatatgatattatttatctttgtatatta 44871411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 1580877 - 1580818
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||| |||||  |||||||    
T  1580877 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtca 1580818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 2986474 - 2986533
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||| ||||||||| |||| ||||||| ||| ||||| ||||||||    
T  2986474 atcttacatgatattattaatctttgtaaattagtagaaaagtatggtcaaaatatgtca 2986533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 8123750 - 8123719
Alignment:
Q  20 atcttatatgatattatttatctttgtatatt 51  Q
    ||||||||||||||||||||||||||||||||    
T  8123750 atcttatatgatattatttatctttgtatatt 8123719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 9615635 - 9615592
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||| ||||||||||||||||||||||| || |||||||    
T  9615635 atcttatataatattatttatctttgtatattagtaaaaaaata 9615592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 14511952 - 14511909
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  14511952 atcttatatgatgttatttatctttgtatattagttgaaaaata 14511909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 20671257 - 20671206
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggt 82  Q
    |||||||||||||||||||||| || ||||||| | |||| |||||||||||    
T  20671257 tattatttatctttgtatattagtataaaaatacactcaaaatatgtcaggt 20671206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 25173781 - 25173726
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    ||||| ||||||||  |||||||||||||||||||||||||| || ||||| ||||    
T  25173781 atcttgtatgatatcgtttatctttgtatattaatagaaaaacattgtcaaaatat 25173726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 29708673 - 29708630
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  29708673 atcttatatgatgttatttatctttgtatattagttgaaaaata 29708630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 32909167 - 32909124
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  32909167 atcttatatgatgttatttatctttgtatattagttgaaaaata 32909124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 38036807 - 38036850
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  38036807 atcttatatgatgttatttatctttgtatattagttgaaaaata 38036850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 886181 - 886131
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  886181 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 886131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 2026684 - 2026634
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||| ||||||||||||||||||||||| || || || ||||||||    
T  2026684 atcttatataatattatttatctttgtatattagtaaaacaacatagtcaa 2026634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 21133020 - 21133050
Alignment:
Q  20 atcttatatgatattatttatctttgtatat 50  Q
    |||||||||||||||||||||||||||||||    
T  21133020 atcttatatgatattatttatctttgtatat 21133050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 42948299 - 42948261
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtca 69  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  42948299 tattatttatctttgtatattagtagaaaaatatggtca 42948261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 14847355 - 14847408
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||| || |||||||||||||||||  |||| ||||||||||| |||||    
T  14847355 aatatcttaaataatattatttatctttgtgaattagtagaaaaatatggtcaa 14847408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 16345289 - 16345252
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaataga 57  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  16345289 atcttatatgatattatttatctttatatattagtaga 16345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 32061250 - 32061291
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    |||||||||||||| |||| ||||||||||||| ||||||||    
T  32061250 atcttatatgatataatttgtctttgtatattagtagaaaaa 32061291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 40645710 - 40645677
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||| |||||||||||    
T  40645710 tattatttatctttgtatattagtagaaaaatat 40645677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 9302465 - 9302425
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaa 60  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  9302465 atcttacataatattatttatctttgtaaattaatagaaaa 9302425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 11335375 - 11335451
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    |||||||||  ||| |||| ||||||||||||| ||||||||||| |||||  ||||| | || || ||||||||||    
T  11335375 atcttatattttatcatttgtctttgtatattagtagaaaaatatggtcaaagtatgttatgtgaataatacacatt 11335451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 23764561 - 23764517
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| |||||||||||| |||||||  ||||||||||||||||    
T  23764561 atcttacatgatattatttttctttgtgaattaatagaaaaatat 23764517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 31127917 - 31127873
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||    
T  31127917 atcttacatgatattatttatctttgtgaattagtagaaaaatat 31127873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 44123819 - 44123863
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||    
T  44123819 atcttacatgatattatttatctttgtgaattagtagaaaaatat 44123863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 40348556 - 40348652
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||| | || ||||| ||||| || ||||||||    
T  40348556 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaaaagtgcaaattgttaaacaggtcatctaata 40348652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 23734284 - 23734225
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  23734284 atatcttatatgatattatttatcttcgtatattagtagaaaaatatagtcaaaatatgt 23734225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 4088788 - 4088838
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4088788 atcttatatgatattatttatctttgtatattaatagaaaaatacagtcaa 4088838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 35265773 - 35265823
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35265773 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaa 35265823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 37100978 - 37101060
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||  || || |||| |||| |||||||| |||||    
T  37100978 atcttatatgatattatttttctttgtatattaatagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaa 37101060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 46074466 - 46074365
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatata--gtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatat 117  Q
    ||||||||||||||||||||||||| ||||||| || ||||| |||  |||||| |||||||||| || ||| |||||||||||| | || |||||||||    
T  46074466 atcttatatgatattatttatctttatatattagtaaaaaaaaatacagtcaacgtatgtcaggtcaataatgcacattgtcaaatatgtcatctaatat 46074367  T
Q  118 ga 119  Q
    ||    
T  46074366 ga 46074365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 16807098 - 16807182
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  16807098 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 16807182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 38069163 - 38069079
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  38069163 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 38069079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 31496597 - 31496640
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31496597 atcttatatgatattatttatctttgtatattaatagaaaaata 31496640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 32222662 - 32222619
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32222662 atcttatatgatattatttatctttgtatattaatagaaaaata 32222619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 9173288 - 9173338
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  9173288 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 9173338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 26651161 - 26651211
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  26651161 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 26651211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 28016227 - 28016177
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  28016227 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 28016177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 38353550 - 38353600
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  38353550 atcttatatgatattatttatctttgtatattagtagaaaaatataatcaa 38353600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 38850814 - 38850732
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| |||||  || || |||| |||| |||||||| |||||    
T  38850814 atcttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaa 38850732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 40232040 - 40231950
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttat 110  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||  | |||| |||| | |||||| ||||||| |||||    
T  40232040 atcttatatgatattatttatctttatatattagtagaaaaatatggtcaaaataaattaggtcaaaattgcacattttcaaacaggttat 40231950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 4033437 - 4033521
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||| ||||||||||||||||||||||| || |||||||  |||||  || ||||||| ||| ||| |||||||||||||    
T  4033437 atcttatataatattatttatctttgtatattagtataaaaatacggtcaaagtacgtcaggtcaaatatatacattgtcaaaca 4033521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 38198630 - 38198674
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  38198630 atcttatatgatattatttatctttgtatattagtagaaaaatat 38198674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 38441927 - 38441843
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||| |||||  || || |||| |||| |||||||| |||||    
T  38441927 atatctcatatgatattattcatctttgtatattagtagaaaaatatggtcaaagtaagttaggtaaaaattacacattttcaaa 38441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 33376887 - 33376844
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  33376887 atcttatatgatattatttttctttgtatattaatagaaaaata 33376844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 38498766 - 38498825
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||    
T  38498766 atcttatttgatattatttatttttgtatattagtagaaaaatatggtcaaaatatgtca 38498825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 40089649 - 40089602
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  40089649 ttatatgatattatttatatttgtatattaatagaaaaatatggtcaa 40089602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 4620178 - 4620097
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| |||||  || || |||| |||| |||||||| |||||    
T  4620178 atcttatataatattatttatctttgtatattaata-aaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaa 4620097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 9136614 - 9136664
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  9136614 atcttatatgctattatttatctttgtctattaatagaaaaatatggtcaa 9136664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 30462173 - 30462223
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  30462173 atcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaa 30462223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 46657782 - 46657832
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  46657782 atcttacatgatattatttatctttgtaaattaatagaaaaatatggtcaa 46657832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 25273969 - 25274053
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||  || || |||| |||| | |||||| |||||||    
T  25273969 atcttatataatattatttatctttgtatattagtagaaaattatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 25274053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 35693782 - 35693826
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  35693782 atcttatatgatattatttatttttgtatattagtagaaaaatat 35693826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 48448630 - 48448586
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| | |||||||||    
T  48448630 atcttatatgatattatttatctttgtatattagtggaaaaatat 48448586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 3124101 - 3124148
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  3124101 ttatatgatattatttatttttgtatattagtagaaaaatacagtcaa 3124148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 3680460 - 3680401
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    ||||||||||||||||||||| ||||||||||| || |||||||  ||||| ||||||||    
T  3680460 atcttatatgatattatttatatttgtatattagtataaaaataaggtcaaaatatgtca 3680401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 26190317 - 26190360
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||    
T  26190317 atcttatatgaaattatttatctttgtatattagtagaaaaata 26190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 42493622 - 42493579
Alignment:
Q  27 atgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  42493622 atgatattatttatctttgtatattagtagaaaaatatggtcaa 42493579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 19327429 - 19327383
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  19327429 atatcttatatgatattatttatctatgtttattagtagaaaaatat 19327383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 47713382 - 47713416
Alignment:
Q  18 atatcttatatgatattatttatctttgtatatta 52  Q
    |||||||||||||||||||||||||||||||||||    
T  47713382 atatcttatatgatattatttatctttgtatatta 47713416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 5887952 - 5887895
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||  |||| ||||||    
T  5887952 atcttatatgatatcatttgtctttgtatattagtagaaaaatatgatcaaaatatgt 5887895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 18795252 - 18795159
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  ||||| | || || |||| | ||||||||| |||| |||||    
T  18795252 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaaataagtgatcta 18795159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 21392167 - 21392232
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaa 85  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  ||||||| |||||    
T  21392167 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaa 21392232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 27248794 - 27248839
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaat 62  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||    
T  27248794 aatatcttatatgatattaattatttttgtatattagtagaaaaat 27248839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 42086750 - 42086669
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||| ||||||||||||||||||||  |||| ||||||| ||| ||||| |||| ||| || || |||||| ||||||||    
T  42086750 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatacatattgtcaa 42086669  T

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Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 5842229 - 5842185
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||    
T  5842229 atcttatatgatattatttatctttatatattagtataaaaatat 5842185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 9821235 - 9821279
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||    
T  9821235 atcttatatgatattatttatctttatatattagtaaaaaaatat 9821279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 10723160 - 10723204
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||    
T  10723160 atcttatatgatattatttatctttatatattagtaaaaaaatat 10723204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 14201526 - 14201625
Alignment:
Q  20 atcttatatgat--attatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatat 117  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||  ||||| |||| |||| | |||| | || | |||||||||  | |||||||||    
T  14201526 atcttatatgatgtattatttatctttgtatattagtagaaaaataatgtcaaaatatatcagatcaaaagtgcaaaatgtcaaacatatcatctaatat 14201625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 27621247 - 27621291
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||| |||||||||||| |||||||||| ||||||||    
T  27621247 atcttatatgattttatttatctttatatattaataaaaaaatat 27621291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 29247739 - 29247707
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    |||||||||||||||||||||||||||||||||    
T  29247739 atcttatatgatattatttatctttgtatatta 29247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 40665718 - 40665770
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| |||||||||   ||||||||| |||||    
T  40665718 atatcttatatgatattatttatctatgtatattagctgaaaaatatggtcaa 40665770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 47080726 - 47080686
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  47080726 ttatataatattatttatctttgtatattagtagaaaaata 47080686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 7314308 - 7314347
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  7314308 tattatttatctttgtatattagtagaaaaatatggtcaa 7314347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 7461008 - 7461063
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||| |||||| ||||    
T  7461008 atcttatatgatattatttatctttttatattagtgaaaaaatacagtcaaaatat 7461063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 23348465 - 23348418
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||| |||||||||||||||||||| || |||||||| |||||    
T  23348465 ttatatgatgttatttatctttgtatattagtaaaaaaatatggtcaa 23348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 31466470 - 31466411
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||| |||||  |||||||    
T  31466470 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtca 31466411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 36404878 - 36404921
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||||    
T  36404878 atcttatataatattatttatctttctatattagtagaaaaata 36404921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 47713614 - 47713555
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  |||||||    
T  47713614 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtca 47713555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 48531471 - 48531530
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  |||||||    
T  48531471 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtca 48531530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 10464227 - 10464177
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| |  |||| ||||||||||| |||||    
T  10464227 atcttatatgatattatttatctttatgaattagtagaaaaatatggtcaa 10464177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 35500859 - 35500809
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| |||||||||||||||||| |  |||| |||||||||||||||||    
T  35500859 atcttacatgatattatttatctttatgaattagtagaaaaatatagtcaa 35500809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 36643311 - 36643361
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||  |||| | ||||||||| |||||    
T  36643311 atcttatatgatattatttatctttgtgaattagtggaaaaatatggtcaa 36643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 36819845 - 36819895
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  36819845 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 36819895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 36859320 - 36859270
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  36859320 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 36859270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 37231675 - 37231625
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  37231675 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 37231625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 38259598 - 38259552
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| |||||||||||||||||| ||||||||  |||||||||||    
T  38259598 atatctaatatgatattatttatctatgtatattggtagaaaaatat 38259552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 41007908 - 41007958
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||   ||||||||| ||||||||||| |||||    
T  41007908 atcttatatgatattatttattgctgtatattagtagaaaaatatggtcaa 41007958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 46242433 - 46242471
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    |||||||||||||||||||||||||||||| || |||||    
T  46242433 ttatatgatattatttatctttgtatattagtaaaaaaa 46242471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 18756698 - 18756661
Alignment:
Q  33 ttatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  18756698 ttatttatctttatatattagtagaaaaatatagtcaa 18756661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 36901528 - 36901569
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||||||||||||| |||||| |||||| ||||||||    
T  36901528 atcttatatgatattatttttctttgcatattagtagaaaaa 36901569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 40818661 - 40818698
Alignment:
Q  32 attatttatctttgtatattaatagaaaaatatagtca 69  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  40818661 attatttatctttgtatattagtagaaaaatatggtca 40818698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 29255354 - 29255309
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagt 67  Q
    ||||||||||||||||||||||||  ||||||| | ||||||||||||    
T  29255354 atcttatatgatattatttatctt--tatattagttgaaaaatatagt 29255309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 36819988 - 36819956
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    |||||||||| ||||||||||||||||||||||    
T  36819988 atcttatatggtattatttatctttgtatatta 36819956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 39982221 - 39982173
Alignment:
Q  28 tgatattatttatctttgtatattaatagaaaaatatagtcaacatatg 76  Q
    |||||| |||||||||||||||||| |||||||||  |||||| |||||    
T  39982221 tgatataatttatctttgtatattagtagaaaaatgcagtcaaaatatg 39982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 41844881 - 41844849
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    |||||||||||| ||||||||||||||||||||    
T  41844881 atcttatatgatgttatttatctttgtatatta 41844849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 37806897 - 37806813
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| || || ||||||||||| || |||||||||||||||    
T  37806897 aatatcttatataatattatttatctttgtatattagtagaaaaatatggttaaaatatgtcaggtcaacaatacacattgtcaa 37806813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 43409431 - 43409531
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||| |||||| || |||||||||| ||||| | || ||||||||    
T  43409431 aatatcttttatgatattatttatctttgtatattaatagaaaaatatggtcaaagtatatcaggtcaataatacacattttcaaataggtcatctaata 43409530  T
Q  117 t 117  Q
    |    
T  43409531 t 43409531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 27668067 - 27667974
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||  ||||||| || |||| |||| |||||||||||||| ||||||||    
T  27668067 ttatatgatattatttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaaaattacaaattgtcaaacaagtcatctaata 27667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 10333529 - 10333613
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || |||| |||| |||||||| |||||||    
T  10333529 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattacacattttcaaaca 10333613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 18504584 - 18504491
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||| || | || |||| |||||||| ||||| |||| |||||    
T  18504584 atcttatatgatattattgatctttgtatattagtagaaaaatatggtcaaaataagttacgtcaaaattacacattttcaaataagtcatcta 18504491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 7724562 - 7724646
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  7724562 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 7724646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 8373546 - 8373462
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  8373546 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 8373462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 12209101 - 12209017
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  12209101 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 12209017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 38963907 - 38963823
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  38963907 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 38963823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 41436944 - 41436860
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| || ||||| |||||||    
T  41436944 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattatacattttcaaaca 41436860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 25762306 - 25762263
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25762306 atcttatatgatattatttatctttgtatattaatagaaaaata 25762263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 31603365 - 31603451
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  31603365 atatcttatatgatattatttatatttgtatattagtagaaaaatattgtcaaagtaagttaggtcaaaattgcacattttcaaaca 31603451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 45036475 - 45036426
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtca 69  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  45036475 atcttatatgatattatttatctttgtatattagtagaaaaatatggtca 45036426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 4137521 - 4137477
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  4137521 atcttatatgatattatttatctttgtatattagtagaaaaatat 4137477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 6730052 - 6730104
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  6730052 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 6730104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 25766556 - 25766512
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  25766556 atcttatatgatattatttatctttgtatattaataaaaaaatat 25766512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 43328750 - 43328802
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  43328750 atatcttatataatattatttatctttgtatattagtagaaaaatatggtcaa 43328802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 15771033 - 15771076
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  15771033 atcttatatgatattatttatctttatatattaatagaaaaata 15771076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 44022380 - 44022297
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaac 103  Q
    ||||||||| || ||| |||||||||||||||| |||||||||||||||||  || || ||||||||| | |||||| ||||||    
T  44022380 atcttatataattttaattatctttgtatattagtagaaaaatatagtcaaagtaagttaggttaaaattgcacattttcaaac 44022297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 6075233 - 6075187
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  6075233 tatatgacattatttatctttgtatattaatagaaaaatatggtcaa 6075187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 8896383 - 8896333
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  8896383 atcttatgtgatattatttatctttgtatattagtagaaaaatatggtcaa 8896333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 15177481 - 15177431
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  15177481 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaa 15177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 16126033 - 16126083
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  16126033 atcttatatgatattatttatctttgtatattagtggaaaaatatggtcaa 16126083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 16127731 - 16127813
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  ||||  || || |||| |||| |||||||| |||||    
T  16127731 atcttatatgatattatttatctttgtatattagtggaaaaatatgatcaaagtaagttaggtcaaaattacacattttcaaa 16127813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 25277881 - 25277927
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||||||||||||||||||||||||||| || |||||||    
T  25277881 aatatcttatatgatattatttatctttgtatattagtataaaaata 25277927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 40471848 - 40471758
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttat 110  Q
    ||||||||||||||||||||||||||||||||| || ||||||||  |||| ||| || | || |||| | |||||| ||||||| |||||    
T  40471848 atcttatatgatattatttatctttgtatattagtaaaaaaatatgatcaaaataagttaagtcaaaattgcacattttcaaacaggttat 40471758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 33046198 - 33046263
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||  ||||||| | ||||||||    
T  33046198 tattatttatctttgtatattagtagaaaaatataatcaaaatatgctaggttaatattacacatt 33046263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 2831819 - 2831743
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||| |||||  || || |||| |||| ||||||||    
T  2831819 atcttacatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatt 2831743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 5030396 - 5030312
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| || |||||||   ||||  |||||||| | |||||   |||||||||||||    
T  5030396 atcttatatgatattatttatctttgtatattagtataaaaatacgatcaaagtatgtcagatcaaaaaggtacattgtcaaaca 5030312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 5096360 - 5096316
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  5096360 atcttatatgatattatttatctttatatattagtagaaaaatat 5096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 22718492 - 22718544
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||||| |||||    
T  22718492 atatcttatatgatattatttatctatatatattagtagaaaaatatggtcaa 22718544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 32776160 - 32776200
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  32776160 tatatgatattatttatctttgtatattagtagaaaaatat 32776200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 37987887 - 37987931
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| || ||||||||    
T  37987887 atcttatatgatattatttatctttgtatattagtaaaaaaatat 37987931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 2543948 - 2543893
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||| ||||| ||||    
T  2543948 atcttatatgatattatttatttttgtatatttatataaaaatatggtcaaaatat 2543893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 24283072 - 24283013
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| || |||||||||||||| ||||||||    
T  24283072 atcttacatgatattatttatctttgtgaattagtaaaaaaatatagtcaaaatatgtca 24283013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 30708877 - 30708932
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||| ||||| ||||    
T  30708877 atcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatat 30708932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 16333592 - 16333542
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||| | | ||||||||| |||||    
T  16333592 atcttatatgatattatttatctttgtatatcagtggaaaaatatggtcaa 16333542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 37316988 - 37316938
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||| |||||    
T  37316988 atcttatatgatattatttatctatgtatattagtagaaatatatggtcaa 37316938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 3987344 - 3987263
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  ||| ||| ||||| ||| || ||||||||    
T  3987344 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagttaataatgcatattgtcaa 3987263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 11383996 - 11384040
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||    
T  11383996 atcttacatgatattatttatctttatatattagtagaaaaatat 11384040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 16646360 - 16646308
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||| |||||||||||| || |||||| ||||||||||| |||||    
T  16646360 atatcttatatggtattatttatctatgaatattagtagaaaaatatggtcaa 16646308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 25627135 - 25627091
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||    
T  25627135 atcttatatgataatatttatctttgtatattagcagaaaaatat 25627091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 41575674 - 41575630
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||    
T  41575674 atcttatatgatattatttatatatgtatattagtagaaaaatat 41575630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 1749123 - 1749166
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  1749123 atcttatatgatgttatttatctttgtatattagttgaaaaata 1749166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 7601348 - 7601391
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  7601348 atcttatatgatgttatttatctttgtatattagttgaaaaata 7601391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 9273465 - 9273422
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  9273465 atcttatatgatgttatttatctttgtatattagttgaaaaata 9273422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 9877195 - 9877136
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||||||||||||||||||||||||  |||| || |||||||| |||||  |||||||    
T  9877195 atcttatatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgtca 9877136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 16180282 - 16180235
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||| ||||| ||||||||||||||||||||||| ||| ||||||||    
T  16180282 aatattttatacgatattatttatctttgtatatttataaaaaaatat 16180235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 20682759 - 20682716
Alignment:
Q  27 atgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||    
T  20682759 atgatattatttatctatgtatattagtagaaaaatattgtcaa 20682716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 20917878 - 20917921
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  20917878 atcttatatgatgttatttatctttgtatattagttgaaaaata 20917921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 21271817 - 21271786
Alignment:
Q  22 cttatatgatattatttatctttgtatattaa 53  Q
    ||||||||||||||||||||||||||||||||    
T  21271817 cttatatgatattatttatctttgtatattaa 21271786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 22897047 - 22897090
Alignment:
Q  21 tcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||    
T  22897047 tcttatatgaaattatttatttttggatattaatagaaaaatat 22897090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 39418132 - 39418073
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||||| |||||||  |||||||    
T  39418132 atcttacatgatattatttatctttgtgaattagtagaaaaatgtagtcaaagtatgtca 39418073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 41319875 - 41319906
Alignment:
Q  20 atcttatatgatattatttatctttgtatatt 51  Q
    ||||||||||||||||||||||||||||||||    
T  41319875 atcttatatgatattatttatctttgtatatt 41319906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 42038672 - 42038731
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||||||||||||||||||||||||  |||| ||||||| ||| |||||  |||||||    
T  42038672 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtca 42038731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 1110441 - 1110491
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  1110441 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 1110491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 7470096 - 7470050
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||    
T  7470096 tatatgatattatttttctttatatattagtagaaaaatatggtcaa 7470050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 13399215 - 13399173
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||| ||||||||||||||||||||| |||| |||||||||||    
T  13399215 cttacatgatattatttatctttgtaaattagtagaaaaatat 13399173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 20517567 - 20517617
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  20517567 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 20517617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 23671525 - 23671575
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||  |||| ||||||| ||| |||||    
T  23671525 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaa 23671575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 23873227 - 23873273
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||| |||||||||||||||||||||||  ||||||| ||||||||    
T  23873227 tatataatattatttatctttgtatattacgagaaaaacatagtcaa 23873273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 38137643 - 38137593
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  38137643 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 38137593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 40598278 - 40598328
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  40598278 atcttacatgatattatttatctttgtgaattattagaaaaatatggtcaa 40598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 41463629 - 41463587
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaat 62  Q
    |||||| ||||||||||||||||||||| |||| |||||||||    
T  41463629 atcttacatgatattatttatctttgtaaattagtagaaaaat 41463587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 19192759 - 19192710
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcag 80  Q
    ||||||||||||||||||||||| | ||||| ||| |||| |||||||||    
T  19192759 tattatttatctttgtatattaacaaaaaaacataatcaaaatatgtcag 19192710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 23886840 - 23886889
Alignment:
Q  21 tcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||| |||  ||||||||| ||||||||| ||||    
T  23886840 tcttatatgatattatttattttttgatattaataaaaaaatataatcaa 23886889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 36931724 - 36931683
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||||||||||||||||||| ||||||| || |||||    
T  36931724 atcttatatgatattatttatctttatatattagtaaaaaaa 36931683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 42006144 - 42006193
Alignment:
Q  21 tcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||| |||||||| | ||| |||||||||||||||| ||||||||    
T  42006144 tcttatatgttattatttgtttttatatattaatagaaaaacatagtcaa 42006193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 4045338 - 4045286
Alignment:
Q  27 atgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    ||||||||||||||||||||| |||| || |||||| | ||||| ||||||||    
T  4045338 atgatattatttatctttgtaaattagtataaaaatgtggtcaaaatatgtca 4045286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 22701025 - 22700970
Alignment:
Q  24 tatatgatattatttatctttgtatatta--atagaaaaatatagtcaacatatgt 77  Q
    ||||| |||||||||||||||||||||||  | | |||||||||||||| ||||||    
T  22701025 tatataatattatttatctttgtatattactaaaaaaaaatatagtcaaaatatgt 22700970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 28452837 - 28452877
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaa 60  Q
    ||||||||| ||||||||||||||| |||||||||| ||||    
T  28452837 atcttatataatattatttatctttatatattaataaaaaa 28452877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 43925186 - 43925142
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||    
T  43925186 atcttacatgatattatttatctttgtgaattagtagaaaaatat 43925142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 25283 - 25372
Alignment:
Q  14 aagaatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| |||||| ||  ||||||||||    
T  25283 aagaacatcttatatgatattatttatctttatatattaata-aaaaatatagtcaaaatatgtcaggtcaaaaatgcaacttgtcaaaca 25372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 32473972 - 32474056
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || | ||||||| |||||||| |||||    
T  32473972 atatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttatgttaaaattacacattttcaaa 32474056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 30721637 - 30721719
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||| |||| | |||||| |||||    
T  30721637 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaa 30721719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 35641878 - 35641797
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    |||||||||||||||||||||| ||||||| ||||||||||| |||||  |||||||| | |||||| ||||||||||||||    
T  35641878 ttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtatgtcagatcaaaaatgcacattgtcaaaca 35641797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 19344651 - 19344735
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || |||| |||| | |||||| |||||||    
T  19344651 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaaca 19344735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 31191129 - 31191179
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31191129 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaa 31191179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 1098287 - 1098203
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  1098287 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 1098203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 13548325 - 13548241
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  13548325 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 13548241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 14057820 - 14057776
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14057820 atcttatatgatattatttatctttgtatattaatagaaaaatat 14057776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 20022972 - 20022888
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  20022972 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 20022888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 20040367 - 20040451
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  20040367 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 20040451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 39104229 - 39104281
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  39104229 atatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 39104281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 1781097 - 1781147
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  1781097 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 1781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 5985054 - 5985008
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  5985054 aatatcttatatgatattatttatctttgtatattagtagaaaaata 5985008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 9936840 - 9936890
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  9936840 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 9936890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 28143040 - 28142990
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  28143040 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 28142990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 30211693 - 30211743
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  30211693 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 30211743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 41263081 - 41263131
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  41263081 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 41263131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 17407378 - 17407290
Alignment:
Q  30 atattatttatctttgtatat--taatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    |||||||||||||||||||||  ||||||||||||||| |||| |||||| |  |||||||| || |||||||||||| |||| |||||    
T  17407378 atattatttatctttgtatatattaatagaaaaatataatcaaaatatgttaaattaaaaatgcaaattgtcaaacaaattatttaata 17407290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 14355611 - 14355535
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||| |||  | |||| |||| ||||||||    
T  14355611 atcttatatgatattatttatttttatatattagtagaaaaatatagtcaagataaattaggtcaaaattacacatt 14355535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 14633119 - 14633035
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  14633119 atcttatatgatattatttatctttgtatatttgtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 14633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 33402543 - 33402587
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  33402543 atcttatatgatattatttatctttgtatattagtagaaaaatat 33402587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 40316930 - 40316886
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  40316930 atcttatatgatattatttatctttgtatattagtagaaaaatat 40316886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 41410611 - 41410655
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  41410611 atcttatatgatattatttatctttgtatattagtagaaaaatat 41410655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 25946245 - 25946198
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||    
T  25946245 aatatcttatatgatattatttatctttgtatatcagtagaaaaatat 25946198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 40080093 - 40080026
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaa 87  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||  || || |||||||||    
T  40080093 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggttaaaa 40080026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 14607509 - 14607559
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  14607509 atcttatatgatattacttatctttgtatattagtagaaaaatatggtcaa 14607559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 27675654 - 27675608
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  27675654 atatcttatatgatattatttatctatgtatattagtagaaaaatat 27675608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 30788317 - 30788267
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  30788317 atcttatacgatattatttatctttgtatattagtagaaaaatatggtcaa 30788267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 34169941 - 34169891
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  34169941 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 34169891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 1831463 - 1831419
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||    
T  1831463 atcttatatgatattatatatctttgtatattagtagaaaaatat 1831419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 4701231 - 4701179
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  4701231 atattttatatgatattatttatttttatatattaatagaaaaatatggtcaa 4701179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 6734893 - 6734817
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||| |||||  || ||  |||||||| ||||||||    
T  6734893 atcttatatgatattatttatctttatatattagtagaaaattatggtcaaattaagttgggttaaaattacacatt 6734817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 20503000 - 20503044
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  20503000 atcttatatgatattatttatctttgtatattggtagaaaaatat 20503044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 27674329 - 27674286
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  27674329 atcttatatgatattatttatctttgtatattaattaaaaaata 27674286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 967306 - 967257
Alignment:
Q  20 atcttatatgatat--tatttatctttgtatattaatagaaaaatatagt 67  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  967306 atcttatatgatatattatttatatttgtatattaatagaaaaatatagt 967257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 970287 - 970337
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  970287 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaa 970337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 4299945 - 4299895
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  4299945 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaa 4299895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 13985731 - 13985781
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  13985731 atcttatatgttataatttgtctttgtatattaatagaaaaatataatcaa 13985781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 30779858 - 30779808
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||| ||||    
T  30779858 atcttacatgatattatttatctttgtaaattagtagaaaaatataatcaa 30779808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 41042789 - 41042839
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||| |||||    
T  41042789 atcttatatgatattatttatcaatgtatattagtagaaaaatatggtcaa 41042839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 30352021 - 30352066
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||    
T  30352021 atatcttatatgatgttatttatctttgtatattagttgaaaaata 30352066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 32382065 - 32382162
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaat-agaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    |||||||||||| |||||||| |||||||||||||| | | ||||||||  |||| ||| || || | || ||| |||||| ||||||||||||||||    
T  32382065 aatatcttatattatattattcatctttgtatattagtaaaaaaaatatgatcaaaataggttagatcaacaatccacattatcaaacaagttatcta 32382162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 1918782 - 1918826
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||||| || || ||||||||    
T  1918782 atcttatatgatattatttatctttgtatactagtaaaaaaatat 1918826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 2551579 - 2551623
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||    
T  2551579 atcttatataatattatttatctttatatattagtagaaaaatat 2551623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 2864103 - 2864147
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||  |||| |||||||||||    
T  2864103 atcttatatgatattatttatctttgtgaattagtagaaaaatat 2864147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4152262 - 4152306
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||    
T  4152262 atcttatataatattatttatatttgtatattagtagaaaaatat 4152306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 8627249 - 8627197
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||| | ||||||||||||||||||||| || |||||||| |||||    
T  8627249 atatcttatataacattatttatctttgtatattagtaaaaaaatatggtcaa 8627197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 10465245 - 10465297
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||| |||||    
T  10465245 atatcttatatgatattatttatatatgtatattagcagaaaaatatggtcaa 10465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 26802055 - 26802103
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||| |||||||||||||||||||| | ||||||||| |||||    
T  26802055 cttatatgatgttatttatctttgtatattagttgaaaaatatggtcaa 26802103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 26809605 - 26809653
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||| |||||||||||||||||||| | ||||||||| |||||    
T  26809605 cttatatgatgttatttatctttgtatattagttgaaaaatatggtcaa 26809653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 26824632 - 26824680
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||| |||||||||||||||||||| | ||||||||| |||||    
T  26824632 cttatatgatgttatttatctttgtatattagttgaaaaatatggtcaa 26824680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 27477693 - 27477733
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  27477693 ttatatgatattatttatctttgtatattagtaaaaaaata 27477733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 39035672 - 39035628
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||    
T  39035672 atcttatattatattatttatctttgtatattagtagaataatat 39035628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 39925316 - 39925284
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    |||||||||||||||||||||||||||||||||    
T  39925316 atcttatatgatattatttatctttgtatatta 39925284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 5213034 - 5212975
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||| |||||  |||||||    
T  5213034 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtca 5212975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 14639667 - 14639710
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  14639667 atcttatatgatgttatttatctttgtatattagttgaaaaata 14639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 21213755 - 21213712
Alignment:
Q  19 tatcttatatgatattatttatctttgtatattaatagaaaaat 62  Q
    |||||||||| ||||||||||||||||||||||| || ||||||    
T  21213755 tatcttatataatattatttatctttgtatattagtaaaaaaat 21213712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 39894930 - 39894989
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||||||||||||||||||||||||  |||| ||||||| ||| |||||  |||||||    
T  39894930 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtca 39894989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 40512792 - 40512733
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |||||||||  |||||||    
T  40512792 atcttacatgatattatttatctttgtgaattagtagaaaagtatagtcaaagtatgtca 40512733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 40797024 - 40797067
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  40797024 atcttatatgatgttatttatctttgtatattagttgaaaaata 40797067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 4087612 - 4087702
Alignment:
Q  26 tatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    ||||||||||||| ||||||||||||| || ||||||| ||||||   ||||||||| |||| |  | | ||||||||| || ||||||||    
T  4087612 tatgatattatttgtctttgtatattattataaaaatacagtcaaagcatgtcaggtcaaaagtttatactgtcaaacatgtcatctaata 4087702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 16048234 - 16048284
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  16048234 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 16048284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 22613821 - 22613771
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  22613821 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 22613771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 37516294 - 37516344
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  37516294 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 37516344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 39036559 - 39036609
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  39036559 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 39036609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 39405913 - 39405963
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  39405913 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 39405963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 41411269 - 41411219
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  41411269 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 41411219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 2799740 - 2799703
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||||||||||||||||||||||| || |||||    
T  2799740 tatatgatattatttatctttgtatattagtaaaaaaa 2799703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 2805906 - 2805869
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||||||||||||||||||||||| || |||||    
T  2805906 tatatgatattatttatctttgtatattagtaaaaaaa 2805869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 5364580 - 5364632
Alignment:
Q  27 atgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    ||||||||||||||||||||  |||| ||||||| ||| ||||| ||||||||    
T  5364580 atgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtca 5364632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 19868798 - 19868754
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||    
T  19868798 atcttacatgatattatttatctttgtgaattagtagaaaaatat 19868754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 43067380 - 43067420
Alignment:
Q  30 atattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||| |||| ||||||||||| |||||    
T  43067380 atattatttatctttgtaaattagtagaaaaatatggtcaa 43067420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 43047499 - 43047412
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagt 107  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || ||||||||| | |||||| ||||||||||    
T  43047499 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggttaaaattgcacattttcaaacaagt 43047412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 14958148 - 14958242
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaa 114  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||  ||| || | | |||||| |||||||||||||| || ||||||    
T  14958148 atcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatatcggatcaaaaatgcacattgtcaaacatgtcatctaa 14958242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 18881308 - 18881358
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18881308 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaa 18881358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 37164128 - 37164078
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37164128 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaa 37164078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 6520549 - 6520497
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  6520549 atatcttatatgatattatttatctatgtatattagtagaaaaatatagtcaa 6520497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 31152773 - 31152689
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  31152773 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 31152689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 39171070 - 39170986
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||| || |||| |||| | |||||| |||||||    
T  39171070 atcttatattatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaaca 39170986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 43447277 - 43447193
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  43447277 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 43447193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 55631826 - 55631910
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| || |||||||| ||||| ||| || |||| |||| | |||||| |||||||    
T  55631826 atcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaaca 55631910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 32154839 - 32154933
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatatga 119  Q
    |||||||||||||||||||||||||||||||||||||| || || ||  ||||||||||||| ||   ||||||||||| | || |||||||||||    
T  32154839 tatatgatattatttatctttgtatattaatagaaaaa-attgttaaagtatgtcaggttaataacgtacattgtcaaatatgtcatctaatatga 32154933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 39195602 - 39195535
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaa 87  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||  |||||||||| ||||    
T  39195602 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaaaa 39195535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 1613169 - 1613219
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  1613169 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 1613219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 4271965 - 4272015
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  4271965 atcttatatgatattatttatctttatatattaatagaaaaatacagtcaa 4272015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 29424760 - 29424714
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  29424760 atatcttatatgatattatttatctttctatattaatagaaaaatat 29424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 37667725 - 37667775
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  37667725 atcttatttgatattatttatctttgtatattaatagaaaaatatggtcaa 37667775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 39260464 - 39260414
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  39260464 atcttatatgatattatttatctttgtatattagtagaaaaatattgtcaa 39260414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 47834095 - 47834145
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  47834095 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 47834145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 53987731 - 53987781
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  53987731 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 53987781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 31657305 - 31657357
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  31657305 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 31657357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 46608325 - 46608241
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||  || || |||| |||| | |||||| |||||||    
T  46608325 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaatttcacattttcaaaca 46608241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 54803009 - 54803053
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  54803009 atcttatatgatattatttatttttgtatattaatagaaaaatat 54803053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 55291184 - 55291088
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||||| | || |||||| |||| |  | ||| ||||||| || ||||||||    
T  55291184 atcttatataatattatttatctttgtatattagtacaaaaatatagtcaaaacatatcaggtcaaaattgtatattatcaaacaggtcatctaata 55291088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 3708364 - 3708321
Alignment:
Q  21 tcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  3708364 tcttatatgatattatttatctttgtatattagtagaaaaatat 3708321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 42185383 - 42185336
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||    
T  42185383 ttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 42185336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 28914480 - 28914430
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  28914480 atcttatatgatattatttatctttatatattagtagaaaaatatggtcaa 28914430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 13203284 - 13203341
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||| |||| ||||||    
T  13203284 atcttgtatgatattatttatctttgtacattgatagaaaaatataatcaaaatatgt 13203341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 28909792 - 28909841
Alignment:
Q  21 tcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  28909792 tcttatatgatattatttatctttgtattttagtagaaaaatatggtcaa 28909841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 48380574 - 48380501
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    |||||||||||||||||||||| ||||||||||| |||||  || || |||| |||||| |||||| |||||||    
T  48380574 tattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaaca 48380501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 8525367 - 8525411
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  8525367 atcttatatgatattatttatccttgtatattagtagaaaaatat 8525411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 10384960 - 10384916
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  10384960 atcttatatgttattatttatctttgtatattagtagaaaaatat 10384916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 27976682 - 27976638
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||    
T  27976682 atctaatatgatattatttatctttgtatattaataaaaaaatat 27976638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 44210263 - 44210211
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  44210263 atatgttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 44210211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 50685032 - 50684988
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  50685032 atcttatatgatattatttatctttatatattagtagaaaaatat 50684988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 51306183 - 51306235
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  51306183 atatcttatattatattatttatctatgtatattagtagaaaaatatggtcaa 51306235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 29844275 - 29844318
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  29844275 atcttatataatattatttatctttatatattaatagaaaaata 29844318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 36662650 - 36662693
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||    
T  36662650 atcttatatgatattatttatctttatatattagtagaaaaata 36662693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 23605851 - 23605897
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  23605851 atatcttatatgatattatttatctatgtatgttagtagaaaaatat 23605897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 24505623 - 24505573
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  24505623 atcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaa 24505573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 27982657 - 27982579
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||   | ||| |||| || ||| |||||||||||    
T  27982657 ttatatgatactatttatctttgtattttagtagaaaaatatagtcagagtgtgttaggtcaataatgcacattgtcaa 27982579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 28988345 - 28988395
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||| |||||    
T  28988345 atcttatatgatattatttatctatgtacattagtagaaaaatatggtcaa 28988395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 33394189 - 33394139
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||| |||||    
T  33394189 atcttatatgagattatttatcttcgtatattagtagaaaaatatggtcaa 33394139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 39332781 - 39332831
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| |||||    
T  39332781 atcttatatgatattatttacttttgtatattagtagaaaaatatggtcaa 39332831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1981332 - 1981373
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  1981332 atcttatatgatattatttatctttgtatattagtaaaaaaa 1981373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 31486734 - 31486819
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    |||||||||||||||||| ||| |||||||||||  | ||  |||||||||| |||||| || ||||| ||||| || ||||||||    
T  31486734 tattatttatctttgtatgttactagaaaaatatgattaaagtatgtcaggtcaaaaatgcatattgtgaaacaggtcatctaata 31486819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 38715672 - 38715616
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  ||||| ||||||    
T  38715672 atcttatatgatattatttatc-ttgtatattagtagaaaaatacggtcaaaatatgt 38715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 40411559 - 40411600
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  40411559 atcttatatgatattatttatctttgtatattagtaaaaaaa 40411600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 1348733 - 1348777
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||    
T  1348733 atcttatataatattatttatatttgtatattagtagaaaaatat 1348777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 2711482 - 2711522
Alignment:
Q  35 atttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  2711482 atttatctttgtatattaatagaaaaatatggtcaaaatat 2711522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 19170651 - 19170567
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  || |||| || || |||| | |||||||||||    
T  19170651 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaaca 19170567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 4209508 - 4209567
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  |||||||    
T  4209508 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtca 4209567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 6234888 - 6234857
Alignment:
Q  22 cttatatgatattatttatctttgtatattaa 53  Q
    ||||||||||||||||||||||||||||||||    
T  6234888 cttatatgatattatttatctttgtatattaa 6234857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 7738931 - 7738872
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||| |||||  |||||||    
T  7738931 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtca 7738872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 13848986 - 13848943
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  13848986 atcttatatgatgttatttatctttgtatattagttgaaaaata 13848943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 18360085 - 18360026
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||| ||||  |||||||    
T  18360085 atcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtca 18360026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 25678472 - 25678519
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtc 78  Q
    ||||||||||||||| ||||||||||||||||||  |||| |||||||    
T  25678472 tattatttatctttgaatattaatagaaaaatatgatcaaaatatgtc 25678519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 36602843 - 36602902
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||| ||||  |||||||    
T  36602843 atcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtca 36602902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 41790489 - 41790543
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||||||| ||||    
T  41790489 atcttatat-atattatttatctttgtatgttggtagaaaaatatagtcaaaatat 41790543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 48336628 - 48336687
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||||| ||| ||||||| ||||||||||||||| ||||||||||  ||||| ||||||    
T  48336628 atatcttgtataatattatctatctttgtatattagtagaaaaatacggtcaaaatatgt 48336687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 51737066 - 51737011
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| ||||| ||||    
T  51737066 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatat 51737011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 6923052 - 6923002
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  6923052 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 6923002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 10181137 - 10181218
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||||| ||||| |||||||||||||||||| ||||||||| | ||||| |||||| | || || | | ||||||||||||    
T  10181137 atcttatacgatat-atttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaatagtgcacattgtcaaa 10181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 19525826 - 19525776
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  19525826 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 19525776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 25644508 - 25644558
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  25644508 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 25644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 28166423 - 28166473
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  28166423 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 28166473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 29821162 - 29821112
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||| |||||| |||| |||||||||||||||| ||||||||||| |||||    
T  29821162 atctaatatgaaattacttatctttgtatattagtagaaaaatatggtcaa 29821112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 46803781 - 46803831
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  46803781 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 46803831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 50033169 - 50033219
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  50033169 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 50033219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 9965518 - 9965421
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatat 117  Q
    |||||||||||||| ||||||||||||| |    |||||||||||||| ||  |||||||||| || |||  | ||||||||  |||| |||||||||    
T  9965518 atcttatatgatataatttatctttgtacaactgtagaaaaatatagttaaagtatgtcaggtcaataatgtatattgtcaattaagtcatctaatat 9965421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 30386945 - 30386912
Alignment:
Q  18 atatcttatatgatattatttatctttgtatatt 51  Q
    ||||||||||| ||||||||||||||||||||||    
T  30386945 atatcttatataatattatttatctttgtatatt 30386912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 4701099 - 4701127
Alignment:
Q  36 tttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||||    
T  4701099 tttatctttgtatattaatagaaaaatat 4701127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 37588482 - 37588514
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    ||||||||||||||||||||| |||||||||||    
T  37588482 atcttatatgatattatttatttttgtatatta 37588514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 50035685 - 50035729
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||    
T  50035685 atcttacatgatattatttatctttgtgaattagtagaaaaatat 50035729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 23631537 - 23631632
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  |||||  ||||| ||||||| |||||| ||| ||||| | ||||||||    
T  23631537 atatcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtatgttaggttaataatacatattttcaaataggttatcta 23631632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 8437225 - 8437131
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaat-agaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||||||  ||||| |||| || ||| ||||||||||||||||| |||||    
T  8437225 atcttatatgatattatttatctttgtatattagtaaaaaaaatatagtcaatgtatgttaggtcaataatccacattgtcaaacaagtcatcta 8437131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 34555263 - 34555179
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||||| |||||| |||||||    
T  34555263 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaaca 34555179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 39099075 - 39099025
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39099075 atctaatatgatattatttatctttgtatattaatagaaaaatatagtcaa 39099025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 9484708 - 9484624
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  9484708 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 9484624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 12948152 - 12948068
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  12948152 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 12948068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 16434804 - 16434888
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| || |||||||| ||||| ||| || |||| |||| | |||||| |||||||    
T  16434804 atcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaaca 16434888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 29455655 - 29455739
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  29455655 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 29455739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 29793325 - 29793409
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  29793325 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 29793409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 42098574 - 42098658
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  42098574 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 42098658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 46866455 - 46866371
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||| || |||| |||| | |||||| |||||||    
T  46866455 atcttatatgatattatttatctttgtatattagtagaaaaatattgccaaaataagttaggtcaaaattgcacattttcaaaca 46866371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 48927749 - 48927833
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  48927749 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtaaaaattgcacattttcaaaca 48927833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 49076373 - 49076457
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  49076373 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 49076457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 48690202 - 48690261
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||    
T  48690202 atcttatatgatattatttatctttgtatattagtagaaaaatattgttaaaatatgtca 48690261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 8440579 - 8440485
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaataga-aaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||| ||  ||||| |||| || ||| |||||||||||||| || |||||    
T  8440579 atcttatatgatattatttatctttgtatattagtaaagaaaatatagttaaggtatgttaggtcaataatccacattgtcaaacatgtcatcta 8440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 29809459 - 29809413
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  29809459 atatcttatatgacattatttatctttgtatattaatagaaaaatat 29809413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 34263651 - 34263701
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  34263651 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 34263701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 50673789 - 50673739
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  50673789 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 50673739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 52094041 - 52094091
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  52094041 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 52094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 53055572 - 53055654
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||  || |||| |||| |||||||| |||||    
T  53055572 atcttaaatgatattatttatctttgtatattagtagaaaaatatggtcaaaattagttaggtcaaaattacacattttcaaa 53055654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 53274942 - 53275024
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||| ||| || |||| |||| | |||||| |||||    
T  53274942 atcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaaataagttaggtcaaaattgcacattttcaaa 53275024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 3086287 - 3086340
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  3086287 aatatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaa 3086340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 20081008 - 20080924
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaa 105  Q
    ||||||||||||||||||||||||| ||||||| ||  |||||||||||||  ||||| |||| || |||||||||| ||||||||    
T  20081008 atcttatatgatattatttatctttatatattagta-taaaatatagtcaaagtatgttaggtcaataatacacattttcaaacaa 20080924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 36364708 - 36364777
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaa 87  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||| || |||| ||||    
T  36364708 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaaataagttaggtcaaaa 36364777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 901035 - 901079
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  901035 atcttatatgatattatttatctttgtatattagtagaaaaatat 901079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 1778475 - 1778423
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  1778475 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 1778423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 4945796 - 4945848
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  4945796 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 4945848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18013417 - 18013461
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  18013417 atcttatatgatattatttatctttgtatattagtagaaaaatat 18013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 26759593 - 26759541
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  26759593 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 26759541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 32961356 - 32961308
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  32961356 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 32961308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34669720 - 34669676
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  34669720 atcttatatgatattatttatctttgtatattagtagaaaaatat 34669676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 34680295 - 34680243
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  34680295 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 34680243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 36179083 - 36179127
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  36179083 atcttatatgatattatttatctttgtatattagtagaaaaatat 36179127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 38878423 - 38878475
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  38878423 atatcttatatgatattatttatctttttatattagtagaaaaatatggtcaa 38878475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 50888459 - 50888407
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  50888459 atattttatatgatattatttatctttgtatattagcagaaaaatatagtcaa 50888407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 18971498 - 18971553
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||    
T  18971498 atcttatatgatattatttatttttatatattagtagaaaaatatagtcaaaatat 18971553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 36594365 - 36594448
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatag-aaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||| || |||| |||| |||||||| |||||    
T  36594365 atcttatatgatattatttatctttatatattaatagaaaaaatatgatcaaaataagttaggtcaaaattacacattttcaaa 36594448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 42247230 - 42247139
Alignment:
Q  14 aagaatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaa 105  Q
    ||||| |||||||| |||||||||||||||| ||| ||| ||||||||||| ||||| |||| | | || || ||| |||||||||||||||    
T  42247230 aagaacatcttataagatattatttatctttatattttagtagaaaaatatggtcaaaatatattacgtcaataatgcacattgtcaaacaa 42247139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 2643216 - 2643266
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  2643216 atcttatatgatattatttatatttgtatattagtagaaaaatatggtcaa 2643266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 28958946 - 28958996
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  28958946 atcttatatgatattatttatctttatatattagtagaaaaatatggtcaa 28958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 43394505 - 43394555
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  43394505 atcttatatgatattatttatctttgtttattagtagaaaaatatggtcaa 43394555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 54684606 - 54684672
Alignment:
Q  11 tcgaagaatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||| || ||||||||| ||||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  54684606 tcgaacaacatcttatataatattatttatctttgtatattagtagaaaaatacggtcaaaatatgt 54684672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 935146 - 935061
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||| |||||||||||||||||||||| | ||||| ||||||||||| ||| | | |||| |||| || | ||||||||||||||    
T  935146 aatattttatatgatattatttatctttatttattagtagaaaaatatggtcgaaacatgttaggtcaatagtacacattgtcaaa 935061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 5504997 - 5504944
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||| |||||||||||||||||| ||||||||||| || ||||||||||||||    
T  5504997 aatattttatatgatattatttatttttgtatattagtaaaaaaatatagtcaa 5504944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 31787192 - 31787100
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    |||||||||||||||||||||||||| |||||| ||||||||| || |||| |||||| | || |||||| ||| || ||||| | ||||||||    
T  31787192 atcttatatgatattatttatctttg-atattagtagaaaaatctaatcaatatatgttaagtaaaaaatgcacgttttcaaataggttatcta 31787100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 33462814 - 33462770
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagt 67  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  33462814 ttatatgatattatttatctttgtatattagtagaaaagtatagt 33462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 44057540 - 44057628
Alignment:
Q  30 atattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatatg 118  Q
    ||||||||||||||||||||||| |||||||| ||  ||||  ||||||| || |||| | |||||| ||||||| || ||||||||||    
T  44057540 atattatttatctttgtatattagtagaaaaacatgatcaaagtatgtcatgtcaaaagtgcacattctcaaacatgtcatctaatatg 44057628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 47340031 - 47340075
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  47340031 atcttatatgatattatttatctttatatattagtagaaaaatat 47340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 49818871 - 49818819
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| |||||||||||||||||| ||||||||| ||||||||||| |||||    
T  49818871 atatctaatatgatattatttatctatgtatattagtagaaaaatatggtcaa 49818819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 1325498 - 1325561
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaa 87  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||  || || |||||||||    
T  1325498 tatatgatattatttatctttatatattagtagaaaaatataatcaaagtaagttaggttaaaa 1325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 10819390 - 10819433
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  10819390 atcttatatgatattatttatctgtgtatattagtagaaaaata 10819433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 48143912 - 48143967
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||| ||||| ||||    
T  48143912 atcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatat 48143967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 32951248 - 32951198
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  32951248 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaa 32951198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 36665164 - 36665217
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||| ||| ||||||||||||||||  |||| |||||||||||||||||    
T  36665164 aatatcttacatggtattatttatctttgtgaattagtagaaaaatatagtcaa 36665217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 38833923 - 38833988
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    |||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| ||||||||    
T  38833923 tattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatt 38833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 1334242 - 1334286
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||| |||||||||||||||||| || ||||||||    
T  1334242 atcttatatgatatcatttatctttgtatattagtaaaaaaatat 1334286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4229135 - 4229179
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||    
T  4229135 atcttatatgatattatttatctatgtatattagtaaaaaaatat 4229179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 4464993 - 4464949
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||    
T  4464993 atcttatatgatattatttatctatgtacattagtagaaaaatat 4464949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 10228678 - 10228726
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||| |||||||||||||||||||| | ||||||||| |||||    
T  10228678 cttatatgatgttatttatctttgtatattagttgaaaaatatggtcaa 10228726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 14751008 - 14751040
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    |||||||||||||||||||||||||||||||||    
T  14751008 atcttatatgatattatttatctttgtatatta 14751040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 30681924 - 30681968
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||    
T  30681924 atcttatatgttataatttatctttgtatattattagaaaaatat 30681968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 35322348 - 35322380
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    |||||||||||||||||||||||||||||||||    
T  35322348 atcttatatgatattatttatctttgtatatta 35322380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 54673927 - 54673971
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||  |||| |||||||||||    
T  54673927 atcttatatgatattatttatctttgttaattagtagaaaaatat 54673971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 12250415 - 12250372
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  12250415 atcttatatgatgttatttatctttgtatattagttgaaaaata 12250372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 21490026 - 21489987
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  21490026 tatatcatattatttatctttgtatattaataaaaaaata 21489987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 28228995 - 28229054
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggt 82  Q
    ||||||||||||  |||||||||||||||||||||| ||||||| |||||| |||||| ||||    
T  28228995 atcttatatgat--tatttatctttgtatattaata-aaaaatacagtcaaaatatgttaggt 28229054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 29720507 - 29720464
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||    
T  29720507 atcttatatgatattatttatctttatatattagtggaaaaata 29720464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 35135819 - 35135768
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggt 82  Q
    |||||||||||||||||||||| |||||||| || |||||  ||||||||||    
T  35135819 tattatttatctttgtatattagtagaaaaacatggtcaaagtatgtcaggt 35135768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 38492207 - 38492250
Alignment:
Q  27 atgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||    
T  38492207 atgatattatttatctttgtaaattagtagaaaaatatggtcaa 38492250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 38833812 - 38833871
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||| ||| ||||| ||||||||    
T  38833812 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtca 38833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 46763985 - 46763954
Alignment:
Q  22 cttatatgatattatttatctttgtatattaa 53  Q
    ||||||||||||||||||||||||||||||||    
T  46763985 cttatatgatattatttatctttgtatattaa 46763954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 51062539 - 51062598
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  |||||||    
T  51062539 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtca 51062598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 1327461 - 1327511
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||| |||||    
T  1327461 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaa 1327511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 7671425 - 7671375
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||   ||||||||||||||| |||||    
T  7671425 atcttacatgatattatttatctttgtgagttaatagaaaaatattgtcaa 7671375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 17053013 - 17053063
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  17053013 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 17053063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 27849100 - 27849150
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||| |||||    
T  27849100 atcttacatgatattatttatctttgttaattaatagaaaagtatggtcaa 27849150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 37833049 - 37833099
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  37833049 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 37833099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 46818340 - 46818386
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||| ||| |||| | ||||||    
T  46818340 tatatgatattatttatctttgtatattagtagtaaaagagagtcaa 46818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5030102 - 5030061
Alignment:
Q  20 atcttatatgata-ttatttatctttgtatattaatagaaaa 60  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  5030102 atcttatatgataattatttatctttgtatattagtagaaaa 5030061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 9997829 - 9997870
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||| |||||||||||||||||||| | ||||||||    
T  9997829 cttatatgatgttatttatctttgtatattagttgaaaaata 9997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 10232434 - 10232475
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||| |||||||||||||||||||| | ||||||||    
T  10232434 cttatatgatgttatttatctttgtatattagttgaaaaata 10232475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 35717967 - 35717910
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    |||||| || |||||||||||||||||  |||| ||||||||||| ||||| ||||||    
T  35717967 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgt 35717910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 37166594 - 37166537
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||||||| ||||||||||||||| ||||||| | ||||||||  ||||| ||||||    
T  37166594 atcttatataatattatttatctttttatattagtggaaaaatacggtcaaaatatgt 37166537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 48706958 - 48706877
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |||  |||| |||||||| || || |||| | ||||||||    
T  48706958 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaataatatatattgtcaa 48706877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 3817835 - 3817803
Alignment:
Q  20 atcttatatgatattatttatctttgtatatta 52  Q
    ||||||||||||||||||||||||| |||||||    
T  3817835 atcttatatgatattatttatctttatatatta 3817803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 49058005 - 49058049
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||    
T  49058005 atcttacatgatattatttatctttgtgaattagtagaaaaatat 49058049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 53019942 - 53019890
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||| || ||||||||||||| |||||| | |||||||| ||||||    
T  53019942 atatcttatataatgttatttatctttgcatattagttgaaaaatacagtcaa 53019890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 43453121 - 43453196
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacat 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||| |||| |||||||    
T  43453121 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattacacat 43453196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 32968225 - 32968129
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaata 116  Q
    ||||||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||| | |||| |  | ||||||||||| || ||||||||    
T  32968225 atcttatatgatattatttatctttgtatattagtataaaaatacagtcaaaatatgtcagttcaaaattgtatattgtcaaacaggtcatctaata 32968129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 50295892 - 50295976
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    |||||||||||||||||||||||||||||||||  |||||||||| | |||  |||||||||| |||||| || |||||||||||    
T  50295892 atcttatatgatattatttatctttgtatattagcagaaaaatatgggcaaagtatgtcaggtcaaaaatgcaaattgtcaaaca 50295976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 52749393 - 52749309
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || |||| |||| | |||||| |||||||    
T  52749393 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtaaaaattgcacattttcaaaca 52749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 31651857 - 31651939
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || | |||||||||| | |||||| |||||    
T  31651857 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaattaagccaggttaaaattgcacattttcaaa 31651939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 4055345 - 4055414
Alignment:
Q  14 aagaatatcttatatgatattatttatctttgtatattaat-agaaaaatatagtcaacatatgtcaggt 82  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||||||    
T  4055345 aagaagatcttatatgatattatttatctttgtatattaataaaaaaaatataatcaaaatatgtcaggt 4055414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 48897034 - 48896949
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||| |||| | |||| || |||||| |||||||||    
T  48897034 aatatcttatatgatattatttatgtttatatattagtagaaaaatatggtcaaaatattttaggtcaataatacatattgtcaaa 48896949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 10100469 - 10100553
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  10100469 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 10100553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 1821584 - 1821634
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  1821584 atcttatatgatattatttatctttgtatattaatggaaaaatatggtcaa 1821634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 6017405 - 6017455
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  6017405 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 6017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 7075286 - 7075336
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  7075286 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 7075336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 23337919 - 23337869
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  23337919 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 23337869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 44741455 - 44741405
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  44741455 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 44741405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 47912392 - 47912343
Alignment:
Q  21 tcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  47912392 tcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 47912343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 2138985 - 2139029
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  2138985 atcttatatgatattatttatctttgtatattagtagaaaaatat 2139029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 3555316 - 3555256
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcag 80  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| ||||  ||||||||    
T  3555316 atcttataagatattatttatctttgtatattagtagaaaaatatattcaaagtatgtcag 3555256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5606347 - 5606391
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  5606347 atcttatatgatattatttatctttgtatattagtagaaaaatat 5606391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 5945877 - 5945833
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  5945877 atcttatatgatattatttatctttgtatattagtagaaaaatat 5945833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 8048702 - 8048754
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  8048702 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 8048754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 10124221 - 10124137
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  10124221 atcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 10124137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 28490274 - 28490222
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  28490274 atatcttatatgatattatttatctatgtatattattagaaaaatatggtcaa 28490222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 41855675 - 41855727
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  41855675 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 41855727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 44240633 - 44240581
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  44240633 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 44240581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 45299430 - 45299346
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||  || || |||| |||| | |||||| |||||||    
T  45299430 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 45299346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 48389180 - 48389128
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  48389180 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 48389128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 49903641 - 49903685
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  49903641 atcttatatgatattatttatctttgtatattagtagaaaaatat 49903685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 4489173 - 4489122
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaac 71  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  4489173 atcttatatgatattatttatctgtgtatattagtagaaaaatatggtcaac 4489122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 26543980 - 26543930
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  26543980 atcttatataatattatttatctttgtatattagtagaaaaatatggtcaa 26543930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 31932134 - 31932184
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  31932134 atcttatatgatattatttatatttgtatattagtagaaaaatatggtcaa 31932184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 33526118 - 33526168
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  33526118 atcttatatgaaattatttatttttgtatattagtagaaaaatatagtcaa 33526168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 44452307 - 44452225
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||| |||||  || || |||| |||| |||||||| |||||    
T  44452307 atcttatatgatattattcatctttgtatgttagtagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaa 44452225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 50014517 - 50014567
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  50014517 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 50014567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 27581022 - 27581107
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||| |||||| ||| ||||||||||||||||||| |||||||||||  ||||  ||||| |||| |||| |||| |||||||||    
T  27581022 aatattttatattatactatttatctttgtatattattagaaaaatatgatcaaagtatgttaggtcaaaattacatattgtcaaa 27581107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 32495193 - 32495250
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||| ||||| ||||||    
T  32495193 atcttttatgatattatttatctttgtatattagtcgaaaaatatggtcaaaatatgt 32495250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 36035795 - 36035754
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  36035795 ttatatgatattatttatctttgtatattagtagaaaaatat 36035754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 38786902 - 38786946
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| | |||||||||    
T  38786902 atcttatatgatattatttatctttgtatattagttgaaaaatat 38786946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 41414317 - 41414265
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  41414317 atatcatatatgatattatttatctatgtatattagtagaaaaatatggtcaa 41414265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 2612034 - 2612113
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||| ||||||||||||||| ||||||| || ||||||| |||||| |||||| |||| || |||  |||||||||||    
T  2612034 ttatattatattatttatctttttatattagtaaaaaaatacagtcaaaatatgttaggtcaataatcaacattgtcaaa 2612113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 31698684 - 31698597
Alignment:
Q  31 tattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatatg 118  Q
    ||||||||||||||||||||||||| ||||||||  ||||  |||||||  ||||||||  || ||||||||||  | ||||||||||    
T  31698684 tattatttatctttgtatattaataaaaaaatatgatcaaagtatgtcaaattaaaaatgtactttgtcaaacatatcatctaatatg 31698597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 31971499 - 31971408
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatc 111  Q
    |||||||||||||||||||||||||||  |||| |||||||||||  |||| |||||| |  |||| |||| | ||||||||| || |||||    
T  31971499 atcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgtcaaataaattatc 31971408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 33033361 - 33033314
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  33033361 aatatcttatatgttattatttatctttttatattaatagaataatat 33033314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3277635 - 3277681
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatag 66  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  3277635 atcttatattatattatttatctttatatattagtagaaaaatatag 3277681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 5117390 - 5117440
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  5117390 atcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaa 5117440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 9334493 - 9334443
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||| |||||    
T  9334493 atcttatatgatattatttatctatgtacattagtagaaaaatatggtcaa 9334443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 9358266 - 9358216
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||| |||||    
T  9358266 atcttatatgatattatttatctatgtacattagtagaaaaatatggtcaa 9358216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 23393344 - 23393294
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||| ||||||||||| || |||||||| |||||    
T  23393344 atcttatatgatattatttatatttgtatattagtataaaaatatggtcaa 23393294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 26441783 - 26441833
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  26441783 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaa 26441833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 27990827 - 27990745
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    |||||| ||||| |||||||| ||||||||||| ||||||||||| |||||  ||||| |||| || ||| ||||| ||||||    
T  27990827 atcttacatgatgttatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaataatgcacatcgtcaaa 27990745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 30005766 - 30005860
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatat 117  Q
    |||||||||||||||||| ||||||||||| |||||||||||  | ||  ||||| | || |||| | |||||||| ||| |||| |||||||||    
T  30005766 ttatatgatattatttatttttgtatattagtagaaaaatatgattaaagtatgtaatgtcaaaagtgcacattgtaaaataagtcatctaatat 30005860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 31427492 - 31427554
Alignment:
Q  19 tatcttatatgatattatttatcttt-gtatattaatagaaaaatatagtcaacatatgtcag 80  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| |||| ||||    
T  31427492 tatcttatatgatattatttatctttaatatattaatcgaaaaatgtagtcaaaatatatcag 31427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 48312138 - 48312097
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||| ||||||||||||||||||||||| ||||||||||    
T  48312138 cttatataatattatttatctttgtatattagtagaaaaata 48312097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 52688643 - 52688591
Alignment:
Q  20 atcttatatgatattatttatctttgtatat--taatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||||||||  || |||||||||| ||||||    
T  52688643 atcttatatgatattatttatctttgtatattatagtagaaaaatacagtcaa 52688591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 3910903 - 3910935
Alignment:
Q  23 ttatatgatattatttatctttgtatattaata 55  Q
    |||||||||||||||||||||||||||||||||    
T  3910903 ttatatgatattatttatctttgtatattaata 3910935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 23569786 - 23569702
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  || |||| || || |||| | |||||||||||    
T  23569786 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaaca 23569702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 38681320 - 38681364
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||    
T  38681320 aatatattatatgatattatttatctttatatattaataaaaaaa 38681364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 4605145 - 4605192
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  4605145 aatatcttacatgatattatttatctttgtgaattaataggaaaatat 4605192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 10648154 - 10648185
Alignment:
Q  20 atcttatatgatattatttatctttgtatatt 51  Q
    ||||||||||||||||||||||||||||||||    
T  10648154 atcttatatgatattatttatctttgtatatt 10648185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 26345362 - 26345409
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||| |||||||||||||||||| |||||| |||| |||||    
T  26345362 ttatatgatataatttatctttgtatattagtagaaatatatggtcaa 26345409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 43590942 - 43590911
Alignment:
Q  22 cttatatgatattatttatctttgtatattaa 53  Q
    ||||||||||||||||||||||||||||||||    
T  43590942 cttatatgatattatttatctttgtatattaa 43590911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 44963628 - 44963671
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  44963628 atcttatatgatgttatttatctttgtatattagttgaaaaata 44963671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 51924926 - 51924957
Alignment:
Q  20 atcttatatgatattatttatctttgtatatt 51  Q
    ||||||||||||||||||||||||||||||||    
T  51924926 atcttatatgatattatttatctttgtatatt 51924957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 16265182 - 16265232
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  16265182 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 16265232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 16266311 - 16266361
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  16266311 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 16266361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 24982500 - 24982550
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  24982500 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 24982550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 27462850 - 27462812
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaa 58  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  27462850 atcttatatgatattatttatcttggtatattagtagaa 27462812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 40058923 - 40058953
Alignment:
Q  20 atcttatatgatattatttatctttgtatat 50  Q
    |||||||||||||||||||||||||||||||    
T  40058923 atcttatatgatattatttatctttgtatat 40058953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 40883525 - 40883479
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||| ||||||| ||||||||||| | |||||||||    
T  40883525 atatcttatatgatactatttatatttgtatattagttgaaaaatat 40883479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 43680219 - 43680269
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||| ||||||||||||||||||  |||| ||||||||||| |||||    
T  43680219 atcttataagatattatttatctttgtgaattagtagaaaaatatggtcaa 43680269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 3529325 - 3529418
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    |||||| |||||||||||||||||| |  |||| ||||||||||| |||||  ||||| | || || |||| | ||||||||| |||| |||||    
T  3529325 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaaataagtcatcta 3529418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 12685853 - 12685894
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||    
T  12685853 atcttatatgatactatttatctttgtatgttagtagaaaaa 12685894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 22328124 - 22328208
Alignment:
Q  29 gatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatatg 118  Q
    |||||||||||||||||||      ||||||||||| |||||  |||||||||| || | | |||||||||||| |||| ||||||||||    
T  22328124 gatattatttatctttgtag-----tagaaaaatatggtcaaagtatgtcaggtcaatagtgcacattgtcaaataagtcatctaatatg 22328208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 37281241 - 37281322
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||| ||||||||||||||||||||  |||| ||||||| ||| |||||  ||||||| || || |||| | ||||||||    
T  37281241 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaa 37281322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 37515486 - 37515527
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaa 61  Q
    ||||||||  |||||||| |||||||||||||||||||||||    
T  37515486 atcttataaaatattattgatctttgtatattaatagaaaaa 37515527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 38644221 - 38644164
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    |||||||||| ||| |||||||||| |||| ||||||||||||||  |||| ||||||    
T  38644221 atcttatatgctatcatttatctttatataataatagaaaaatatgatcaaaatatgt 38644164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 48219754 - 48219673
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||| ||||||||||||||||||||  |||| ||||||| ||| |||||| ||| ||| || || ||| || ||||||||    
T  48219754 atcttacatgatattatttatctttgtgaattactagaaaagtatggtcaacgtatatcaagtcaataatgcatattgtcaa 48219673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 42915289 - 42915341
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    |||||| |||||||||||| || ||||||| |||||||||| |||||| ||||    
T  42915289 ttatataatattatttatcattatatattagtagaaaaatacagtcaaaatat 42915341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 2656626 - 2656710
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  || || |||| |||| | |||||| |||||||    
T  2656626 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaaca 2656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 995675 - 995625
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  995675 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaa 995625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 12869373 - 12869467
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatat 117  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||  ||||||| || |||| |||| ||| ||||| | || |||||||||    
T  12869373 ttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaaaagtacaaattatcaaataggtcatctaatat 12869467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 2667281 - 2667365
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||  || || |||| |||| | |||||| |||||||    
T  2667281 atcttatatgatattatttatctttgtttattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaaca 2667365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 17417670 - 17417770
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatatga 119  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  | ||  |||||  ||| |||| | || ||||||||||| || |||||||||||    
T  17417670 atcttatatgatattatttatctttgtatattagtagaaaaatatgattaaattatgtttggtcaaaattgcatattgtcaaacatgtcatctaatatga 17417769  T
Q  120 a 120  Q
    |    
T  17417770 a 17417770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 24798502 - 24798586
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  24798502 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 24798586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 24825277 - 24825193
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  24825277 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 24825193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 30699373 - 30699297
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| ||||||||    
T  30699373 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatt 30699297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 16434652 - 16434557
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatatg 118  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||  |||||||| | |||| | || |||| ||||||| | ||||||||||    
T  16434652 ttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagtatgtcagatcaaaagtgcaaattgccaaacaaatcatctaatatg 16434557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 19788690 - 19788595
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacaca-ttgtcaaacaagttatctaa 114  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||| || ||  |||||||||| |||| | |||| ||||||||||||| ||||||    
T  19788690 atcttacatgatattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaaaagtgcacatttgtcaaacaagtcatctaa 19788595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 24693250 - 24693195
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatat 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  24693250 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatat 24693195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 2397882 - 2397832
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  2397882 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 2397832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 4890082 - 4890132
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  4890082 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 4890132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 32541433 - 32541483
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  32541433 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 32541483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 29514982 - 29515071
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagtta 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  ||||  || || |||| |||| | |||||| ||||||| ||||    
T  29514982 atcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtta 29515071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 31709007 - 31708962
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  31709007 atatcttatatgatattatttatctttgtatattagtagaaaaata 31708962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2141680 - 2141636
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  2141680 atcttatatgatattatttatctttgtatattagtagaaaaatat 2141636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 6142463 - 6142507
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  6142463 atcttatatgatattatttatctttgtatattagtagaaaaatat 6142507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 9022952 - 9022868
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||  ||||| |||| |||| | || ||| |||||||    
T  9022952 atcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaattgcatattttcaaaca 9022868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 16661558 - 16661640
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||  |||||  || || |||| |||| |||||||| |||||    
T  16661558 atcttatatgatattatttatctttatatattagtagaaaaatacggtcaaagtaagttaggtcaaaattacacattttcaaa 16661640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 33973617 - 33973539
Alignment:
Q  24 tatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaa 102  Q
    ||||| ||||||||||||||||||||||| || |||||||| ||||  ||||||||| | |||| | ||||||||||||    
T  33973617 tatataatattatttatctttgtatattagtaaaaaaatatggtcataatatgtcagatcaaaagtgcacattgtcaaa 33973539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 34500963 - 34500885
Alignment:
Q  42 tttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatctaatatgaa 120  Q
    ||||||||||| |||||||||||  ||||  |||||||||| |||| | ||||||||||||||| |||| |||||||||    
T  34500963 tttgtatattagtagaaaaatatgatcaaagtatgtcaggtcaaaagtgcacattgtcaaacaacttatttaatatgaa 34500885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 17496281 - 17496358
Alignment:
Q  27 atgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    |||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  17496281 atgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 17496358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 25163310 - 25163363
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  25163310 aatatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaa 25163363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 10105923 - 10105879
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  10105923 atcttatatgatattatttatctttatatattagtagaaaaatat 10105879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 16969487 - 16969440
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  16969487 ttatatgatattatttatatttgtatattagtagaaaaatatggtcaa 16969440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 19762383 - 19762288
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacaca-ttgtcaaacaagttatctaa 114  Q
    |||||| |||||||||||||| ||||||||||| || |||||||| || ||  |||||||||| |||| |  ||| ||||||||||||| ||||||    
T  19762383 atcttacatgatattatttatatttgtatattagtaaaaaaatatggttaaactatgtcaggtcaaaagtgtacatttgtcaaacaagtcatctaa 19762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 10109367 - 10109417
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||| ||||||    
T  10109367 atcttatataatattatttatttttgtatattagtagaaaaataaagtcaa 10109417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 16120833 - 16120887
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    |||||||||||||||||||||||||||||| || |||||||  ||||| ||||||    
T  16120833 ttatatgatattatttatctttgtatattagtaaaaaaatacggtcaaaatatgt 16120887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 32673860 - 32673810
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||| |||||    
T  32673860 atcttatatgatattatttctctatgtatattagtagaaaaatatggtcaa 32673810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 17179354 - 17179410
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||| |||||| ||||||    
T  17179354 atcttatataatattatttatctttgtatattagtag-aaaatacagtcaaaatatgt 17179410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 6188612 - 6188656
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||    
T  6188612 atcttatatgatattatttatctttatatattagtaaaaaaatat 6188656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 2913009 - 2912966
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  2913009 atcttatatgatgttatttatctttgtatattagttgaaaaata 2912966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 16696128 - 16696069
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  |||||||    
T  16696128 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtca 16696069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 18992052 - 18992111
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||| |||||  |||||||    
T  18992052 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtca 18992111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13207065 - 13207015
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  13207065 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 13207015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 13358606 - 13358528
Alignment:
Q  35 atttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttatcta 113  Q
    |||||||||||||||||||||  ||||||| |||||  || || |||| |||| |||||||| ||||| |||| |||||    
T  13358606 atttatctttgtatattaataacaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaataagtcatcta 13358528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 24150890 - 24150940
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||| |||||    
T  24150890 atcttacatgatattatttatctttgtgaattaatagaaaagtatggtcaa 24150940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 29986270 - 29986220
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  29986270 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 29986220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 31948598 - 31948647
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||| |||||| || |||||||| |||||    
T  31948598 atcttatatgatattatttatctttgcatattagta-aaaaatatggtcaa 31948647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 35117384 - 35117342
Alignment:
Q  28 tgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||| | ||||||||| |||||    
T  35117384 tgatattatttatctttgtatattagtggaaaaatatggtcaa 35117342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 28483149 - 28483106
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||  |||||| |||||||||||    
T  28483149 atcttatatgatattatttatcttt-aatattagtagaaaaatat 28483106  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 29795562 - 29795519
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||||||||||||||||||||||||  |||||| |||||||||||    
T  29795562 atcttatatgatattatttatcttt-aatattagtagaaaaatat 29795519  T

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Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 184078 - 183988
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagttat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| ||||||| |||||    
T  184078 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggttat 183988  T

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Target: scaffold0024 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 36466 - 36543
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattg 97  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||| || ||||||||||| |||| | |||||||    
T  36466 atcttatatgataatatttatctttgtatattaattaaaaaatatagttaaaatatgtcaggtcaaaagtgcacattg 36543  T

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Target: scaffold0221 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 5488 - 5404
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaaca 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  || || |||| |||| | |||||| |||||||    
T  5488 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 5404  T

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Target: scaffold0687 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 1101 - 1034
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaa 87  Q
    ||||||||||||||||||||||||||||||||| || |||||||  ||||| ||||||||||| ||||    
T  1101 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaaaa 1034  T

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Target: scaffold0500 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 627 - 677
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  627 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaa 677  T

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Target: scaffold0283 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 3107 - 3057
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  3107 atcttatatgatattatttatcttagtatattaatagaaaaatataatcaa 3057  T

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Target: scaffold0281 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 13219 - 13166
Alignment:
Q  17 aatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  13219 aatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaa 13166  T

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Target: scaffold1248 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 1411 - 1458
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  1411 ttatatgatattatttatttttgtatattagtagaaaaatatggtcaa 1458  T

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Target: scaffold0952 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 902 - 855
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  902 ttatatgatattatttatttttgtatattagtagaaaaatatggtcaa 855  T

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Target: scaffold0195 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 197 - 247
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  197 atcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaa 247  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 45236 - 45158
Alignment:
Q  23 ttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||||||||||||||||||||||||| | ||||||||||  ||| | |||| |||| | || ||| |||||||||||    
T  45236 ttatatgatattatttatctttgtatataagtagaaaaataaggtcgaaatatatcagatcaataatgcacattgtcaa 45158  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 145675 - 145637
Alignment:
Q  26 tatgatattatttatctttgtatattaatagaaaaatat 64  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  145675 tatgatattatttatctttgtatattagtagaaaaatat 145637  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 117470 - 117551
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||  ||| ||| || || |||||| ||||||||    
T  117470 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatacatattgtcaa 117551  T

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Target: scaffold0289 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 9236 - 9196
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaa 60  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  9236 atcttatatgatattatttatctttgtatgttagtagaaaa 9196  T

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Target: scaffold0366 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 14208 - 14267
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtca 79  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||| |||||  |||||||    
T  14208 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtca 14267  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 24150 - 24209
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgt 77  Q
    ||||||| ||| ||||||| ||||||||||||||| ||||||||||  ||||| ||||||    
T  24150 atatcttgtataatattatctatctttgtatattagtagaaaaatacggtcaaaatatgt 24209  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 19687 - 19730
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaata 63  Q
    |||||||||||| |||||||||||||||||||| | ||||||||    
T  19687 atcttatatgatgttatttatctttgtatattagttgaaaaata 19730  T

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Target: scaffold0717 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 4138 - 4184
Alignment:
Q  18 atatcttatatgatattatttatctttgtatattaatagaaaaatat 64  Q
    |||| |||||| ||||||||||| ||||||||||| |||||||||||    
T  4138 atatattatataatattatttatttttgtatattagtagaaaaatat 4184  T

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Target: scaffold0604 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 1263 - 1313
Alignment:
Q  20 atcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 70  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||| |||||    
T  1263 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaa 1313  T

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Target: scaffold0069 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 4551 - 4477
Alignment:
Q  22 cttatatgatattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacatt 96  Q
    ||||||| |||||||||||||||| |||||| ||||||||||  ||||| ||| || |||| |||| | ||||||    
T  4551 cttatataatattatttatctttgcatattagtagaaaaatacggtcaaaataagttaggtcaaaattgcacatt 4477  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 1767 - 1719
Alignment:
Q  53 atagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaa 101  Q
    |||||||||||||||| | ||||||||||| || ||| |||||||||||    
T  1767 atagaaaaatatagtcgaaatatgtcaggtcaataatgcacattgtcaa 1719  T

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