View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5940_high_2 (Length: 279)

Name: NF5940_high_2
Description: NF5940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5940_high_2
NF5940_high_2
[»] chr6 (15 HSPs)
chr6 (1-135)||(33921389-33921523)
chr6 (1-134)||(9354361-9354494)
chr6 (4-58)||(20027638-20027692)
chr6 (3-135)||(15371783-15371915)
chr6 (1-120)||(14312583-14312702)
chr6 (1-52)||(33017947-33017998)
chr6 (1-58)||(3874047-3874104)
chr6 (1-58)||(14306238-14306295)
chr6 (4-132)||(15355631-15355759)
chr6 (1-58)||(7301077-7301134)
chr6 (11-135)||(34803624-34803749)
chr6 (1-36)||(8232330-8232365)
chr6 (46-135)||(15325244-15325334)
chr6 (1-91)||(31265832-31265922)
chr6 (48-96)||(7844437-7844485)
[»] chr1 (46 HSPs)
chr1 (1-135)||(16040130-16040264)
chr1 (1-135)||(11425790-11425924)
chr1 (1-135)||(4466075-4466209)
chr1 (3-135)||(34813972-34814104)
chr1 (1-135)||(50926800-50926935)
chr1 (3-135)||(29225325-29225461)
chr1 (1-130)||(37541038-37541168)
chr1 (3-135)||(27932749-27932886)
chr1 (1-91)||(27209932-27210022)
chr1 (3-135)||(29756062-29756195)
chr1 (3-120)||(49944987-49945104)
chr1 (4-135)||(21304728-21304858)
chr1 (1-135)||(37495882-37496014)
chr1 (4-58)||(14352622-14352676)
chr1 (1-135)||(28706544-28706678)
chr1 (3-135)||(3160607-3160740)
chr1 (3-135)||(26583783-26583916)
chr1 (3-135)||(26924040-26924173)
chr1 (1-121)||(31634230-31634348)
chr1 (2-135)||(36326126-36326259)
chr1 (20-120)||(27391419-27391519)
chr1 (1-57)||(37280996-37281052)
chr1 (4-56)||(47293599-47293651)
chr1 (48-108)||(47479912-47479972)
chr1 (4-71)||(17342884-17342951)
chr1 (1-84)||(19532891-19532974)
chr1 (3-135)||(24131321-24131453)
chr1 (4-135)||(36232710-36232841)
chr1 (1-58)||(12267629-12267686)
chr1 (9-58)||(20986580-20986629)
chr1 (13-58)||(26040734-26040779)
chr1 (3-133)||(40754336-40754466)
chr1 (1-105)||(50267389-50267493)
chr1 (3-91)||(51749148-51749236)
chr1 (80-135)||(10587502-10587557)
chr1 (1-51)||(5115830-5115880)
chr1 (4-58)||(16956599-16956653)
chr1 (1-51)||(52382391-52382441)
chr1 (1-91)||(52830379-52830469)
chr1 (1-58)||(705347-705404)
chr1 (43-108)||(4659526-4659591)
chr1 (3-91)||(46496073-46496159)
chr1 (3-91)||(32587820-32587908)
chr1 (3-91)||(42926189-42926277)
chr1 (43-135)||(46536435-46536527)
chr1 (79-135)||(46968197-46968253)
[»] chr5 (31 HSPs)
chr5 (1-135)||(5357738-5357872)
chr5 (3-135)||(39060343-39060475)
chr5 (1-135)||(30437660-30437794)
chr5 (3-135)||(5147416-5147549)
chr5 (3-91)||(8692783-8692871)
chr5 (3-73)||(16926074-16926144)
chr5 (1-58)||(25108626-25108683)
chr5 (1-58)||(25167718-25167775)
chr5 (3-135)||(38978959-38979092)
chr5 (1-131)||(42818956-42819087)
chr5 (1-135)||(6610890-6611024)
chr5 (18-120)||(16283523-16283625)
chr5 (1-59)||(36006889-36006947)
chr5 (1-58)||(25111146-25111203)
chr5 (1-58)||(25170237-25170294)
chr5 (4-91)||(11099442-11099529)
chr5 (1-120)||(33988253-33988372)
chr5 (3-110)||(41594793-41594899)
chr5 (3-91)||(3725241-3725329)
chr5 (20-103)||(35666957-35667038)
chr5 (80-135)||(15898610-15898665)
chr5 (5-135)||(31090361-31090492)
chr5 (3-117)||(858390-858504)
chr5 (4-58)||(35968776-35968830)
chr5 (29-135)||(42211410-42211516)
chr5 (1-34)||(4044499-4044532)
chr5 (1-58)||(10044721-10044778)
chr5 (36-132)||(13135833-13135927)
chr5 (3-116)||(35646029-35646142)
chr5 (18-71)||(39008202-39008255)
chr5 (81-133)||(31196453-31196505)
[»] chr2 (33 HSPs)
chr2 (1-135)||(37528991-37529125)
chr2 (3-135)||(314482-314615)
chr2 (1-109)||(24451835-24451943)
chr2 (1-135)||(9724931-9725065)
chr2 (3-132)||(2048347-2048476)
chr2 (3-134)||(6972461-6972592)
chr2 (28-130)||(3199975-3200078)
chr2 (1-133)||(4282939-4283073)
chr2 (1-104)||(38280147-38280250)
chr2 (1-91)||(9472475-9472565)
chr2 (1-58)||(14890370-14890427)
chr2 (1-133)||(43182325-43182457)
chr2 (80-135)||(13026703-13026758)
chr2 (3-120)||(2882040-2882158)
chr2 (4-58)||(39807269-39807323)
chr2 (1-58)||(1908491-1908548)
chr2 (1-58)||(7931493-7931550)
chr2 (3-135)||(13222123-13222256)
chr2 (1-58)||(18460541-18460598)
chr2 (75-132)||(39166615-39166672)
chr2 (4-120)||(3123702-3123818)
chr2 (4-135)||(20027069-20027201)
chr2 (16-120)||(28527032-28527136)
chr2 (3-91)||(33755312-33755400)
chr2 (29-109)||(36103247-36103327)
chr2 (1-135)||(7213528-7213662)
chr2 (78-120)||(39547922-39547964)
chr2 (3-128)||(6213777-6213902)
chr2 (80-133)||(43427008-43427061)
chr2 (3-119)||(19515936-19516050)
chr2 (3-91)||(23685014-23685102)
chr2 (27-91)||(40965093-40965157)
chr2 (27-103)||(43950400-43950476)
[»] chr3 (24 HSPs)
chr3 (1-135)||(21585330-21585464)
chr3 (1-135)||(48409637-48409773)
chr3 (1-56)||(29858864-29858919)
chr3 (1-58)||(53754061-53754118)
chr3 (80-131)||(8769355-8769406)
chr3 (48-109)||(51636842-51636903)
chr3 (4-47)||(36315741-36315784)
chr3 (1-120)||(53876371-53876490)
chr3 (18-120)||(2868644-2868746)
chr3 (1-51)||(51165005-51165055)
chr3 (3-109)||(54122170-54122276)
chr3 (1-73)||(41287315-41287387)
chr3 (18-133)||(17776916-17777031)
chr3 (18-133)||(19078217-19078332)
chr3 (1-135)||(32977710-32977844)
chr3 (18-120)||(36097590-36097692)
chr3 (1-34)||(1334802-1334835)
chr3 (3-91)||(9218200-9218288)
chr3 (3-104)||(11251078-11251179)
chr3 (1-105)||(32827254-32827358)
chr3 (1-45)||(39144698-39144742)
chr3 (3-91)||(39866517-39866605)
chr3 (3-91)||(43639480-43639568)
chr3 (64-120)||(46785914-46785970)
[»] chr7 (29 HSPs)
chr7 (1-135)||(32776036-32776171)
chr7 (1-91)||(2849308-2849398)
chr7 (5-90)||(36070162-36070247)
chr7 (24-120)||(45890793-45890889)
chr7 (3-133)||(29996950-29997081)
chr7 (3-133)||(47238272-47238403)
chr7 (3-131)||(27234558-27234685)
chr7 (3-135)||(37264368-37264499)
chr7 (1-91)||(47454057-47454147)
chr7 (55-120)||(23186085-23186150)
chr7 (3-135)||(32971937-32972070)
chr7 (27-135)||(33773963-33774071)
chr7 (3-120)||(37490553-37490670)
chr7 (1-120)||(23111023-23111143)
chr7 (1-57)||(27337871-27337927)
chr7 (20-132)||(29645157-29645269)
chr7 (18-135)||(11616632-11616748)
chr7 (3-120)||(17266082-17266198)
chr7 (1-58)||(45218155-45218212)
chr7 (4-58)||(43007950-43008004)
chr7 (5-91)||(44604442-44604528)
chr7 (3-135)||(7425797-7425930)
chr7 (1-58)||(18731492-18731549)
chr7 (4-124)||(21446492-21446613)
chr7 (64-121)||(31549556-31549613)
chr7 (1-58)||(34064268-34064324)
chr7 (1-105)||(5724658-5724761)
chr7 (3-91)||(23058874-23058961)
chr7 (1-57)||(24288476-24288532)
[»] scaffold0221 (1 HSPs)
scaffold0221 (3-131)||(10713-10843)
[»] chr4 (33 HSPs)
chr4 (4-120)||(4357623-4357739)
chr4 (3-135)||(28330849-28330982)
chr4 (3-135)||(22872306-22872440)
chr4 (4-133)||(25902383-25902513)
chr4 (3-135)||(20964207-20964340)
chr4 (28-132)||(9778857-9778961)
chr4 (53-120)||(12619792-12619859)
chr4 (1-108)||(52676978-52677085)
chr4 (4-57)||(28279893-28279946)
chr4 (1-58)||(44633209-44633266)
chr4 (4-120)||(38160087-38160203)
chr4 (3-114)||(17237098-17237209)
chr4 (3-101)||(38319966-38320065)
chr4 (3-109)||(49448896-49449000)
chr4 (18-120)||(4360343-4360445)
chr4 (4-58)||(10099722-10099776)
chr4 (1-51)||(35998121-35998171)
chr4 (1-58)||(35029088-35029145)
chr4 (1-50)||(39052906-39052955)
chr4 (1-58)||(42051653-42051710)
chr4 (1-58)||(55360345-55360402)
chr4 (61-120)||(50714695-50714754)
chr4 (19-108)||(19688386-19688473)
chr4 (19-101)||(30568734-30568816)
chr4 (1-135)||(48400551-48400685)
chr4 (1-103)||(49812282-49812384)
chr4 (1-58)||(4354501-4354558)
chr4 (1-58)||(13719828-13719885)
chr4 (1-50)||(37787014-37787063)
chr4 (5-132)||(46958779-46958904)
chr4 (40-135)||(5499352-5499448)
chr4 (16-120)||(41203805-41203909)
chr4 (4-52)||(55293532-55293580)
[»] chr8 (23 HSPs)
chr8 (3-135)||(14690015-14690148)
chr8 (27-132)||(27973609-27973714)
chr8 (27-132)||(28030878-28030983)
chr8 (3-135)||(7258287-7258419)
chr8 (3-131)||(29730818-29730948)
chr8 (2-135)||(32231305-32231439)
chr8 (1-91)||(40077714-40077804)
chr8 (3-135)||(5392104-5392236)
chr8 (25-131)||(15559055-15559160)
chr8 (3-121)||(27868259-27868377)
chr8 (1-58)||(8618181-8618238)
chr8 (27-108)||(27875089-27875170)
chr8 (27-108)||(28015266-28015347)
chr8 (1-58)||(29638354-29638411)
chr8 (1-135)||(28791361-28791495)
chr8 (1-131)||(39998216-39998346)
chr8 (3-91)||(2195523-2195611)
chr8 (3-130)||(1494172-1494300)
chr8 (1-105)||(44790372-44790476)
chr8 (4-104)||(33743832-33743933)
chr8 (3-103)||(45420890-45420991)
chr8 (3-91)||(32241388-32241476)
chr8 (4-136)||(37219680-37219815)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-51)||(352465-352515)
[»] scaffold0576 (1 HSPs)
scaffold0576 (4-132)||(621-749)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-56)||(12435-12490)
[»] scaffold0685 (1 HSPs)
scaffold0685 (1-51)||(6404-6454)
[»] scaffold0009 (1 HSPs)
scaffold0009 (82-135)||(220156-220209)


Alignment Details
Target: chr6 (Bit Score: 99; Significance: 6e-49; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33921523 - 33921389
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |  ||||    
T  33921523 tacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccatttttctctctccttcactaatatatttttcttaataagtgcgaaa 33921424  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||| |||||  ||||||||||||||||||||||||    
T  33921423 tgagcaaatggctcagttaaaatgggacggaggga 33921389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 9354494 - 9354361
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||| |||| | |||    
T  9354494 tacatttatgataaagaagaatggaccaatatttaacaaagacactcaaaaccatttttctctctcattcactaatatatttttcttaaaaaatgtaaaa 9354395  T
Q  101 tgaacaaataactcagttaaaatgggacggaggg 134  Q
    | | ||||| ||||||||||| | | ||||||||    
T  9354394 taagcaaatgactcagttaaattagaacggaggg 9354361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 20027638 - 20027692
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  20027638 atttatgataaagaagaatgcaccaatacttaacaaagacactcaaaatcatttt 20027692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 15371915 - 15371783
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| || |||| || | ||  ||||||||||||||||| ||| | | |||||| ||| | ||||||||||||| | ||||||    
T  15371915 catttatgataaagaagaatgcactaatagttgataag-acactcaaaaccatttttctctcgctttcacttatacactttttcttaataattgtgaaat 15371817  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    |||| ||   |||||||||||||||||| |||||    
T  15371816 gaaccaagggctcagttaaaatgggacgaaggga 15371783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14312702 - 14312583
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||| | |||||| |||||||||||||||| ||||| ||||||||||| ||   ||||||| | ||  |||||| ||||||  |||||||    
T  14312702 tacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttctatgtccttcatttatgcatttttattaatacttatgaaa 14312603  T
Q  101 tgaacaaataactcagttaa 120  Q
    | | ||||| || |||||||    
T  14312602 taagcaaatgacacagttaa 14312583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33017998 - 33017947
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaac 52  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  33017998 tacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaac 33017947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3874104 - 3874047
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||||||| |||| |||||||||| ||||| |||||||||| ||||||    
T  3874104 tacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaatcatttt 3874047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14306295 - 14306238
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||| | |||||| |||||||||||||||| ||||| |||||||||||    
T  14306295 tacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttt 14306238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 15355631 - 15355759
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatg 102  Q
    |||||||||||||||||||| ||||||| || | ||  ||||||||||||| ||| ||| ||  |||||| ||| | ||||||||||||| | | |||||    
T  15355631 atttatgataaagaagaatgcaccaatagttgataag-acactcaaaaccaattttctctctttttcacttatacactttttcttaataattgtaaaatg 15355729  T
Q  103 aacaaataactcagttaaaatgggacggag 132  Q
    ||| || | |||||||||||||| ||||||    
T  15355730 aaccaagagctcagttaaaatggaacggag 15355759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7301134 - 7301077
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||| | |||||| || ||||||||||||||||||| ||||| |||||    
T  7301134 tacatttatgataatggagaatgcacaaatacttaacaaacacacttaaaactatttt 7301077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 34803749 - 34803624
Alignment:
Q  11 ataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatgaacaaat 109  Q
    ||||||| ||||| | ||||| || | ||| ||||||||||||||||||||| ||| |||  | ||| | ||||||||||||| | |||||||| | ||     
T  34803749 ataaagaggaatgcatcaatagttgataaagacactcaaaaccattttcctctctctttcctttatacactttttcttaataagtgtgaaatgagctaag 34803650  T
Q  110 aactcagttaaaatgggacggaggga 135  Q
      |||| |||||||||||||||||||    
T  34803649 ggctcaattaaaatgggacggaggga 34803624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8232365 - 8232330
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaa 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8232365 tacatttatgataaagaagaatgcaccaatacttaa 8232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 15325244 - 15325334
Alignment:
Q  46 tcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||||| ||| ||| ||| |||||| ||| | ||||||||||||| | ||||||||   || | ||||||||||||||||||||||||    
T  15325244 tcaaaaccaattttctctctctttcacttatacactttttcttaataattgtgaaatgagtcaagagctcagttaaaatgggacggaggga 15325334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31265832 - 31265922
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||||  | |||||| |||||||||||||||   |||| ||||| ||||| ||| |||||||| | ||| |||| ||||||||    
T  31265832 tacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactatttttctctctccttcatttatacatttgtcttaata 31265922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 7844437 - 7844485
Alignment:
Q  48 aaaaccattttcctccctccttcactaatatatttttcttaataaatat 96  Q
    ||||||||||| ||| ||| |||||  ||||||||||||||||||||||    
T  7844437 aaaaccatttttctctctcattcacatatatatttttcttaataaatat 7844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16040130 - 16040264
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||| |||||||||||||||||||||||| |||||    
T  16040130 tacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccatttttctctctccttgactaatatatttttcttaataaatgtgaaa 16040229  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||| ||||| ||||| ||||| | |||||||||||    
T  16040230 tgagcaaatgactcaattaaatttggacggaggga 16040264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 11425924 - 11425790
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||  |||||    
T  11425924 tacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaactatttttctctctccttcactaatatatttttcttaataaacgtgaaa 11425825  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||| |||||  |||| ||||| |||||||||||||    
T  11425824 tgagcaaatggctcaattaaattgggacggaggga 11425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4466209 - 4466075
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||   ||||||| ||||||| ||| ||| ||||||||||||||||||||||||| | |||||    
T  4466209 tacatttatgataaagaagaatggaccaatacttaacaaaggtactcaaacccatttttctctctcattcactaatatatttttcttaataagtgtgaaa 4466110  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||||||||  |||| ||||| |||||||||||||    
T  4466109 tgaacaaatggctcaattaaattgggacggaggga 4466075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 34813972 - 34814104
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||| ||  |||| || ||||||||||||  ||||| ||||| ||||| ||| |||||||||||||| |||||||||||||| | |||||||    
T  34813972 catttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctctccttcactaatacatttttcttaataagtgtgaaatg 34814071  T
Q  103 aacaaataactcagttaaaatgggacggaggga 135  Q
    | |||| || ||| ||||| |||||||||||||    
T  34814072 agcaaaaaattcacttaaattgggacggaggga 34814104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 50926800 - 50926935
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaata-tatttttcttaataaatatgaa 99  Q
    ||||||||||||||||||||||| |||||||||| |||||  || ||||||||||||| ||| ||| ||  || |||  ||||||||||||| || ||||    
T  50926800 tacatttatgataaagaagaatgcaccaatacttgacaaatgcattcaaaaccatttttctctctctttttcttatacaatttttcttaatatatgtgaa 50926899  T
Q  100 atgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||  ||| | ||||||||||||| ||||||||||    
T  50926900 atgagaaaaaagctcagttaaaatgagacggaggga 50926935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 29225461 - 29225325
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaata-ta---tttttcttaataaatatga 98  Q
    ||||||||||||| ||||||| ||||||||||||||||  ||||||||| |||||| ||| ||| |||||| ||| ||   ||||||||||||  | |||    
T  29225461 catttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttttctcactctttcacttatactacactttttcttaatatgtgtga 29225362  T
Q  99 aatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||| ||||  ||||| ||| |||||||||||||||    
T  29225361 aatgagcaaaagactcaattataatgggacggaggga 29225325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 37541168 - 37541038
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaa 99  Q
    ||||||||| ||||||||||||| ||||||| || | ||| ||| ||||||||||||| ||| ||| |||||| ||| | ||||||||||||| | ||||    
T  37541168 tacatttataataaagaagaatgcaccaatagttgataaagacattcaaaaccatttttctctctctttcacttatacactttttcttaataagtgtgaa 37541069  T
Q  100 atgaacaaataactcagttaaaatgggacgg 130  Q
    |||||  ||| ||||| ||||||||| ||||    
T  37541068 atgaatcaatgactcaattaaaatggaacgg 37541038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 27932886 - 27932749
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttctta----ataaatatg 97  Q
    ||||||||||||||||||||| ||||||| || ||||  |||||||||  |||||| ||| ||| |||||| ||||| |||| ||||    |||||| ||    
T  27932886 catttatgataaagaagaatgcaccaatagttgacaaggacactcaaacgcatttttctctctctttcacttatatacttttacttaatatataaatgtg 27932787  T
Q  98 aaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||||| | ||| ||| |||||||||||||||||||||    
T  27932786 aaatgagccaatgacttagttaaaatgggacggaggga 27932749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 27210022 - 27209932
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    ||||||||||||||||||||||| ||||||||||  |||| |||||||||| |||||| ||| ||| |||| | ||| | |||||||||||    
T  27210022 tacatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcatttatacacttttcttaata 27209932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 29756195 - 29756062
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||| || | ||   |||||||| ||||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  29756195 catttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacactttttcttaataagtgtgaaat 29756096  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    || | ||   ||| ||||||||||||||||||||    
T  29756095 gagccaagggctccgttaaaatgggacggaggga 29756062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 49944987 - 49945104
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    ||||||||||| ||||||||| || ||||||||||||   |||| ||||||||||| ||| || ||||| | ||| |||||||||||||  | |||||||    
T  49944987 catttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttcttcatttatacatttttcttaatatgtgtgaaatg 49945086  T
Q  103 aacaaataactcagttaa 120  Q
    | ||||| ||| ||||||    
T  49945087 agcaaatgacttagttaa 49945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 21304858 - 21304728
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatga 103  Q
    ||||||||||||||| |||| | |||||||| ||||| ||||||||||| |||||  || ||| |||| | ||| ||||||||||||  || ||||||||    
T  21304858 atttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaacaatttt-atctctctttcatttatacatttttcttaatttatgtgaaatga 21304760  T
Q  104 acaaataactcagttaaaatgggacggaggga 135  Q
     ||| | ||||||||||| || |||| |||||    
T  21304759 tcaactgactcagttaaactgcgacgaaggga 21304728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37495882 - 37496014
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||| ||||||||||||| |||||||||| | ||| ||| |||||| |||||  ||| ||  |||| | ||| | ||||||||||   || ||||    
T  37495882 tacatttataataaagaagaatgcaccaatacttgataaagacattcaaaatcattt--ctctctttttcatttatacacttttcttaatttgtaagaaa 37495979  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||| |||||||||| ||||| |||||||||||||    
T  37495980 tgaaaaaataactcaattaaactgggacggaggga 37496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 14352622 - 14352676
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||| |||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  14352622 atttacgataaagaagaatgcaccaatacttgacaaagacactcaaaaccatttt 14352676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 28706678 - 28706544
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||||||| |||| | |||||||| |||||  |||||||||||||||| ||| ||  |||| | ||| |||||| ||||||  | |||||    
T  28706678 tacatttatgataaagaaaaatgcatcaatacttgacaaaggcactcaaaaccatttttctctcttattcatttatacattttttttaatatgtgtgaaa 28706579  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||  ||| |  |||||||||| || ||||||||||    
T  28706578 tggtcaactggctcagttaaactgagacggaggga 28706544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 3160740 - 3160607
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    |||||||||||||||| |||| ||||||| || ||||   |||||||| ||||||| ||  ||| |||||| ||| | ||||||||||||| | ||||||    
T  3160740 catttatgataaagaataatgcaccaatagttgacaagggcactcaaacccatttttctttctctttcacttatacactttttcttaataagtgtgaaat 3160641  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   ||   ||||||||||||||||||||||||    
T  3160640 gagtcaagggctcagttaaaatgggacggaggga 3160607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 26583783 - 26583916
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||| || | |||  ||||||||  |||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  26583783 catttatgataaagaagaatgcaccaatagttgataaaggcactcaaactcatttttctctctctttcacttatacactttttcttaataagtgtgaaat 26583882  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   ||    |||||||||||||||||||||||    
T  26583883 gagtcaagggttcagttaaaatgggacggaggga 26583916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 26924173 - 26924040
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||| || | ||   ||||||||  |||||| ||| ||| ||||||  || | ||||||||||||| | ||||||    
T  26924173 catttatgataaagaagaatgcaccaatagttgataagggcactcaaactcatttttctctctctttcacttttacactttttcttaataagtgtgaaat 26924074  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    || | || | ||||||||||| ||||||||||||    
T  26924073 gagccaagagctcagttaaaacgggacggaggga 26924040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 31634348 - 31634230
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||||||  ||||||||| ||| ||| || | | ||| ||||||||||||  || |||||    
T  31634348 tacatttatgataaagaggaatgcatcaatacttaacaaagacactc--aaccatttttctctctcttttatttatacatttttcttaatctatgtgaaa 31634251  T
Q  101 tgaacaaataactcagttaaa 121  Q
    ||  ||| || ||||||||||    
T  31634250 tggtcaactagctcagttaaa 31634230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 36326259 - 36326126
Alignment:
Q  2 acatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaat 101  Q
    |||||||||||||| ||||||| ||||||| || ||||| ||||||||||||||| | ||| ||| |||| | ||| | ||||||||||   | ||||||    
T  36326259 acatttatgataaacaagaatgcaccaatatttgacaaagacactcaaaaccattgttctctctctttcatttatacacttttcttaatctgtgtgaaat 36326160  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    |  ||| |  |||||||||| ||||| |||||||    
T  36326159 gttcaactggctcagttaaactgggatggaggga 36326126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 27391419 - 27391519
Alignment:
Q  20 aatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagtta 119  Q
    ||||||||||||||||| ||   |||| |||| |||||| ||| |||||||||| ||| ||||||| |||||| | |||| ||||||||| ||||| |||    
T  27391419 aatgaaccaatacttaataagagcacttaaaatcatttttctctctccttcacttatacatttttcgtaataagtgtgaattgaacaaatgactcactta 27391518  T
Q  120 a 120  Q
    |    
T  27391519 a 27391519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37281052 - 37280996
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattt 57  Q
    ||||||||||||||| ||||||| |||||||||| ||||| |||||||||| |||||    
T  37281052 tacatttatgataaaaaagaatgcaccaatacttgacaaagacactcaaaatcattt 37280996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 47293651 - 47293599
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatt 56  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||| ||||    
T  47293651 atttatgataaagaagaatgcaccaatacttgacaaaaacactcaaaatcatt 47293599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 47479972 - 47479912
Alignment:
Q  48 aaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaa 108  Q
    ||||||||||| ||| ||| || | | ||||||||||||||||||||||||||||||||||    
T  47479972 aaaaccatttttctctctcgtttattgatatatttttcttaataaatatgaaatgaacaaa 47479912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 17342884 - 17342951
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttca 71  Q
    ||||||||||| | |||||| |||||||||||||||| ||||| ||||||||||| | | ||||||||    
T  17342884 atttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttccctctccttca 17342951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19532974 - 19532891
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatattttt 84  Q
    |||||||||||||  | ||||||||||||||||||||||  ||||| ||||| ||||| |||  ||||||| | ||||||||||    
T  19532974 tacatttatgatagtggagaatgaaccaatacttaacaagtacacttaaaactatttttctctatccttcatttatatattttt 19532891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 24131453 - 24131321
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||| ||| || | ||   || ||||||||||||| ||| ||  |||||| |||   ||||||||||||| | ||||||    
T  24131453 catttatgataaagaagaatgcacctatagttgataagggcattcaaaaccatttttctctct--ttcacttatacgctttttcttaataagtgtgaaat 24131356  T
Q  102 gaa-caaataactcagttaaaatgggacggaggga 135  Q
    ||  ||||| |||||||||||||||||||||||||    
T  24131355 gagtcaaatgactcagttaaaatgggacggaggga 24131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 36232841 - 36232710
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatga 103  Q
    |||||||||||||||||||| ||||||||||  |||| |||||||||| |||||| ||| ||| |||  | ||| | ||||||||||   ||||||| |     
T  36232841 atttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcgtttatacacttttcttaatctgtatgaaaagt 36232742  T
Q  104 acaaataactcagttaaaatgggacggaggga 135  Q
      || ||||||| ||||| ||||| |||||||    
T  36232741 taaactaactcaattaaattgggagggaggga 36232710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12267686 - 12267629
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| |||||||||| | |||  |||||||||| |||||    
T  12267686 tacatttatgataaagaagaatgtaccaatacttgaaaaatgcactcaaaactatttt 12267629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 20986629 - 20986580
Alignment:
Q  9 tgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  20986629 tgataaagaagaatgcaccaatacttgacaaagacactcaaagccatttt 20986580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 26040734 - 26040779
Alignment:
Q  13 aaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||    
T  26040734 aaagaagaatgcaccaatacttgacaaaaacactcaaaaccatttt 26040779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 40754466 - 40754336
Alignment:
Q  3 catttatgataaagaagaatgaaccaatac-ttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||| |||||||  || | ||   |||||||||||||||  ||| ||| |||||| ||| | ||||||||||||| |||||||    
T  40754466 catttatgataaagaagaatgcaccaataggttgataagggcactcaaaaccattt--ctctctctttcacttatacactttttcttaataagtatgaaa 40754369  T
Q  101 tgaacaaataactcagttaaaatgggacggagg 133  Q
    |||   || | |||||||||| |||||||||||    
T  40754368 tgagtcaagagctcagttaaattgggacggagg 40754336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50267493 - 50267389
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||| | |||||| |||||||||||||||   |||| ||||| ||||| ||| | | |||| | ||| |||||||||||||  | |||||    
T  50267493 tacatttatgataatggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctcactttcatttatacatttttcttaatacgtgtgaaa 50267394  T
Q  101 tgaac 105  Q
    |||||    
T  50267393 tgaac 50267389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 51749236 - 51749148
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||| | ||||| ||||||||||||||||  ||||| |||| || ||| ||| |||||||| | ||| |||| ||||||||    
T  51749236 catttatgataatggagaataaaccaatacttaacaagaacacttaaaatcagttttctctctccttcatttatacatttatcttaata 51749148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 10587557 - 10587502
Alignment:
Q  80 tttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||||||||| | ||||||||   ||||||||| |||||||||||||||||||    
T  10587557 tttttcttaataagtgtgaaatgagtcaataactcacttaaaatgggacggaggga 10587502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5115880 - 5115830
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaa 51  Q
    ||||||||||||||||||||||| | ||||||||  |||| ||||||||||    
T  5115880 tacatttatgataaagaagaatgcatcaatacttgtcaaagacactcaaaa 5115830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 16956599 - 16956653
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||| ||||||| || ||||||||| ||| ||||||||| |||||||    
T  16956599 atttatgataaataagaatgcacaaatacttaataaagacactcaaacccatttt 16956653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52382441 - 52382391
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaa 51  Q
    ||||||||||||||||||||||| | |||||||| || || ||||||||||    
T  52382441 tacatttatgataaagaagaatgcatcaatacttgactaagacactcaaaa 52382391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 52830469 - 52830379
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||||  | | |||| ||||||||||||||||  |||||||||  ||||| ||| |||||||| | ||| |||||| ||||||    
T  52830469 tacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattatttttctctctccttcatttatacattttttttaata 52830379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 705404 - 705347
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||| ||||||||||||||||| || ||||||||| ||| ||| |||||| ||||||    
T  705404 tacatctatgataaagaagaatgcactaatacttaataaagacattcaaaatcatttt 705347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 4659526 - 4659591
Alignment:
Q  43 cactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaa 108  Q
    |||| ||||| ||||| ||| | |||||||||||| |||||||||||||| | ||||||| |||||    
T  4659526 cacttaaaactatttttctctccccttcactaatacatttttcttaataagtgtgaaatggacaaa 4659591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 46496073 - 46496159
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||| | |||||  | |||| ||||||||  |||||||||||||||||  || |||||||| | |||||||| ||||||||    
T  46496073 catttatgataatggagaatacatcaatccttaacaagaacactcaaaaccatttt--tctctccttcatttatatatttgtcttaata 46496159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 32587820 - 32587908
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||| | | |||| | |||||||||||||| ||||| ||||  ||||| ||| | |||||| | ||| |||||||||||||    
T  32587820 catttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcaccttcatttatacatttttcttaata 32587908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 42926189 - 42926277
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  | |||||| ||| |||||||||||| ||||| |||| |||||| |||  || |||| | ||| |||||||||||||    
T  42926189 catttatgatagtggagaatgcaccgatacttaacaaaaacacttaaaatcatttttctctttcattcatttatacatttttcttaata 42926277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 46536435 - 46536527
Alignment:
Q  43 cactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||| ||||||||||| |||  |||||||   ||| ||||||||||||| || ||||| || ||||| ||||||||||   ||||||||||||    
T  46536435 cacttaaaaccatttttctctttccttcatctataaatttttcttaatacatgtgaaacgagcaaatgactcagttaattcgggacggaggga 46536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 46968197 - 46968253
Alignment:
Q  79 atttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||||||||||||||||||||| |||| | |||| ||||| ||| | |||||||    
T  46968197 atttttcttaataaatatgaaatgagcaaaaagctcacttaaattggaatggaggga 46968253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 5357872 - 5357738
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| | || ||    
T  5357872 tacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatttttctctctccttcactaatatatttttcttaataagtgtgtaa 5357773  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||| |||||   ||| ||||| |||||||||||||    
T  5357772 tgagcaaatggttcaattaaattgggacggaggga 5357738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 39060475 - 39060343
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||| | |||||||    
T  39060475 catttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttctctctccttcactaatatatttttcttaataagtgtgaaatg 39060376  T
Q  103 aacaaataactcagttaaaatgggacggaggga 135  Q
    | |||||   ||| ||||| ||| |||||||||    
T  39060375 agcaaatggttcaattaaattggaacggaggga 39060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 30437794 - 30437660
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||||||| |||| ||||||| |||||||| ||||||||||| ||||| ||  || ||||  |||||||||||||||||||| | |||||    
T  30437794 tacatttatgataaagaataatggaccaataattaacaaaaacactcaaaactatttttctgtcttcttcgttaatatatttttcttaataagtgtgaaa 30437695  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||| ||||   ||| ||||| |||||||| ||||    
T  30437694 tgaataaatggttcaattaaattgggacggtggga 30437660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 5147549 - 5147416
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||| || | ||  |||||||||| |||||| |||  || |||||| ||||| ||||||||||||| | ||||||    
T  5147549 catttatgataaagaagaatgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatatattttttcttaataagtgtgaaat 5147450  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   ||  |||||||||||||||||||||||||    
T  5147449 gagtcaaagactcagttaaaatgggacggaggga 5147416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 8692871 - 8692783
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  | |||||| |||||||||||||||  ||||| ||||||||||| |||||||||||| | |||||||| ||||||||    
T  8692871 catttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccatttttctccctccttcatttatatatttgtcttaata 8692783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 16926144 - 16926074
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcact 73  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| ||| ||| ||||||    
T  16926144 catttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcact 16926074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25108626 - 25108683
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| |||||    
T  25108626 tacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttt 25108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25167718 - 25167775
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| |||||    
T  25167718 tacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttt 25167775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 38978959 - 38979092
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||| ||||| ||||||| |||| ||   |||||||||||||||| ||  ||| ||| ||  || | ||||||||||||| | ||||||    
T  38978959 catttatgataaagaggaatgtaccaatagttaataagggcactcaaaaccatttttctatctctttcccttgtacactttttcttaataagtgtgaaat 38979058  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||  ||||  ||||||||||||||||||||||||    
T  38979059 gagtaaatggctcagttaaaatgggacggaggga 38979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 42818956 - 42819087
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaa 99  Q
    ||||||||||||||||||||||| ||||||  |||| ||   |||||||||||||||| ||  ||| || ||| ||| | ||||||||||||| | ||||    
T  42818956 tacatttatgataaagaagaatgcaccaatgattaataagggcactcaaaaccatttttctttctcttttacttatacactttttcttaataagtgtgaa 42819055  T
Q  100 atgaacaaataactcagttaaaatgggacgga 131  Q
    ||||   ||||||| || ||||||||||||||    
T  42819056 atgagtcaataactaaggtaaaatgggacgga 42819087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 6610890 - 6611024
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||  | |||||| |||||||||||| ||| ||||| |||  |||||| ||| |||||||| | ||| ||||||||||||  || |||||    
T  6610890 tacatttatgatagtggagaatgcaccaatacttaataaaaacacttaaactcatttttctctctccttcattgatacatttttcttaatctatgtgaaa 6610989  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||| ||  |  |||||||||| || ||||||||||    
T  6610990 tgatcatttggctcagttaaactgagacggaggga 6611024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 16283625 - 16283523
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagt 117  Q
    |||||| |||||||| |||||||  || | |||||||||||  || |||||||| | ||| |||||| |||||| || |||||||| |||||||||||||    
T  16283625 agaatgcaccaatacataacaaaatcatttaaaaccatttttttctctccttcatttatacattttttttaatacatgtgaaatgatcaaataactcagt 16283526  T
Q  118 taa 120  Q
    |||    
T  16283525 taa 16283523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36006947 - 36006889
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttc 59  Q
    ||||||||||||||||||||||| || ||||||| ||||| ||||| ||||||||||||    
T  36006947 tacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaaccattttc 36006889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25111203 - 25111146
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| | |||||||| ||||| ||||||||||| |||||    
T  25111203 tacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttt 25111146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25170294 - 25170237
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| | |||||||| ||||| ||||||||||| |||||    
T  25170294 tacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttt 25170237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 11099529 - 11099442
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    ||||||||||  | |||||| |||||||||||||||| ||||| ||||| ||||| ||| ||| |||| | ||| |||||||||||||    
T  11099529 atttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactatttttctctctctttcatttatacatttttcttaata 11099442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33988253 - 33988372
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||  | |||||  |||||||||||||||| ||||| ||||||||||| ||  |||||||| | ||| |||| ||||||||  | |||      
T  33988253 tacatttatgatagtggagaatacaccaatacttaacaaaaacacttaaaaccatttttctttctccttcatttatacatttgtcttaatatgtgtgatt 33988352  T
Q  101 tgaacaaataactcagttaa 120  Q
    ||| ||||| ||||||||||    
T  33988353 tgagcaaatgactcagttaa 33988372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 41594899 - 41594793
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||| |  |||||| ||||||||| ||||| ||| | ||||  ||||| ||| ||| |||||| |||||||||||||||||  |||||||||    
T  41594899 catttatgataatggtgaatga-ccaatacttgacaaaaacatttaaaattatttttctctctcattcacttatatatttttcttaatatgtatgaaatg 41594801  T
Q  103 aacaaata 110  Q
    | ||||||    
T  41594800 agcaaata 41594793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 3725241 - 3725329
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  | |||||| |||||||||||||||   |||| ||||||||||| ||| |||||||  | ||| |||||||||||||    
T  3725241 catttatgatagtggagaatgcaccaatacttaacaatagcacttaaaaccatttttctctctccttcctttatacatttttcttaata 3725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 35666957 - 35667038
Alignment:
Q  20 aatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatga 103  Q
    |||| |||||||||||| |||  |||| ||||| ||||| |||  ||||||| ||||| |||||||||||||||| ||||||||    
T  35666957 aatgcaccaatacttaagaaaagcacttaaaactatttttctc--tccttcaataataaatttttcttaataaatgtgaaatga 35667038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 15898610 - 15898665
Alignment:
Q  80 tttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||||||||| | |||||||||| ||  ||||| |||||||||||||||||||    
T  15898610 tttttcttaataagtgtgaaatgaactaaagactcatttaaaatgggacggaggga 15898665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 31090361 - 31090492
Alignment:
Q  5 tttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatga 103  Q
    ||||||||||||||||||| ||||||| || | ||   ||||||||| |||||| ||| ||  |||||| ||| | ||||||||||||||| | ||||||    
T  31090361 tttatgataaagaagaatgcaccaatagttgataagggcactcaaaatcatttttctctctttttcacttatacattttttcttaataaatgtaaaatga 31090460  T
Q  104 acaaataactcagttaaaatgggacggaggga 135  Q
       ||  ||||||||||||||| || ||||||    
T  31090461 gtcaaggactcagttaaaatggaactgaggga 31090492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 858390 - 858504
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||| | |||||| ||||||| |||||||    ||| |||||||||||  || |||||| | | ||| |||||||||||||  | |||||||    
T  858390 catttatgataatggagaatgtaccaatatttaacaagataacttaaaaccatttttttctctcctttatttatacatttttcttaatatgtgtgaaatg 858489  T
Q  103 aacaaataactcagt 117  Q
    | ||||| |||||||    
T  858490 agcaaatgactcagt 858504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 35968776 - 35968830
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||| ||||||||||||| || ||||||| ||||| ||||||||||| |||||    
T  35968776 atttataataaagaagaatgtactaatacttgacaaagacactcaaaactatttt 35968830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 42211410 - 42211516
Alignment:
Q  29 atacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaaatgggac 128  Q
    |||||||||||   |||| ||||||||||| ||||| |||||| | ||| |||||| ||||||  | |||||||| ||||| |||| |||||  ||||||    
T  42211410 atacttaacaagagcacttaaaaccatttttctcccaccttcatttatacattttttttaatatgtgtgaaatgagcaaatgactcggttaatttgggac 42211509  T
Q  129 ggaggga 135  Q
     ||||||    
T  42211510 agaggga 42211516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4044532 - 4044499
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatactt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  4044532 tacatttatgataaagaagaatgcaccaatactt 4044499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10044721 - 10044778
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||| ||||||| | |||||||| | ||| ||||||||||| |||||    
T  10044721 tacatttatgataaaaaagaatgcatcaatacttgaaaaatacactcaaaactatttt 10044778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 13135833 - 13135927
Alignment:
Q  36 acaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggag 132  Q
    ||||| ||||| ||||||||||  ||| |||||||| | ||| | |||||||||||  | |||||||||||||| |||| |||||  ||||||||||    
T  13135833 acaaaaacacttaaaaccattt--ctctctccttcatttatacagttttcttaatacgtgtgaaatgaacaaatgactctgttaatttgggacggag 13135927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 35646142 - 35646029
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||  | |||||| |||||||||||||||   |||| |||| |||||| ||| ||| |||| | |||||||| ||||||||  | ||||| |    
T  35646142 catttatgatagtggagaatgcaccaatacttaacaagatcacttaaaatcatttttctctctcattcatttatatatttgtcttaatatgtgtgaaaag 35646043  T
Q  103 aacaaataactcag 116  Q
    || |||| ||||||    
T  35646042 aaaaaatgactcag 35646029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 39008202 - 39008255
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttca 71  Q
    ||||||||||||||||||||||   |||| ||||||||||| ||| ||||||||    
T  39008202 agaatgaaccaatacttaacaagagcacttaaaaccatttttctctctccttca 39008255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 31196453 - 31196505
Alignment:
Q  81 ttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggagg 133  Q
    |||||||||||| | |||||||| | || || |||||||||||||||||||||    
T  31196453 ttttcttaataagtgtgaaatgagccaagaattcagttaaaatgggacggagg 31196505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 37529125 - 37528991
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||  ||||| |||||||||||||| ||||||| | |||||    
T  37529125 tacatttatgataaagaaaaatagaccaatacttaacaaagacactcaaaaccatttttctctatcctttactaatatattttttttaataagtgtgaaa 37529026  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||||| ||||||||||| |||||||||||||    
T  37529025 tgaacaaatgactcagttaaattgggacggaggga 37528991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 314482 - 314615
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| | ||||| || | ||   |||||||||||||||||||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  314482 catttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcacttatacactttttcttaataagtgtgaaat 314581  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   |||  ||||||||||||||||||||||||    
T  314582 gagtcaatcgctcagttaaaatgggacggaggga 314615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24451835 - 24451943
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||| ||   | || || ||||||||| || ||||||| | |||||    
T  24451835 tacatttatgataaagaagaatgaaccaatattcaataaagacactcaaaaccatttttctattttctacattaatatattctttttaataagtgtgaaa 24451934  T
Q  101 tgaacaaat 109  Q
    | |||||||    
T  24451935 taaacaaat 24451943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9724931 - 9725065
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||| |||||||||| | |||  ||||||||| |||||  ||| ||| |||| | ||| | |||||||||||  | |||||    
T  9724931 tacatttatgataaagaagaatgcaccaatacttgataaaagcactcaaaatcatttctctctctctttcatttatacacttttcttaatatgtgtgaaa 9725030  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||  |||| ||||| ||||| | |||||||||||    
T  9725031 tgagaaaatgactcaattaaattaggacggaggga 9725065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 2048347 - 2048476
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    ||||||||||||| ||||||| ||||||| || | ||   |||||| ||||||||| ||| ||| |||||| ||| |||||| ||||||| | |||||||    
T  2048347 catttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcacttatacattttttttaataagtgtgaaatg 2048446  T
Q  103 aacaaataactcagttaaaatgggacggag 132  Q
    |   ||||||||||||||||  ||||||||    
T  2048447 agtcaataactcagttaaaagaggacggag 2048476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 6972592 - 6972461
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatattttt-cttaataaatatgaaat 101  Q
    ||||||||||||||||||||| || |||| || | ||   ||||||||||||||||| || ||| |||||| ||| |||||| |||||||| | ||||||    
T  6972592 catttatgataaagaagaatgcacaaatagttgataagggcactcaaaaccattttc-tctctctttcacttatacattttttcttaataagtgtgaaat 6972494  T
Q  102 gaacaaataactcagttaaaatgggacggaggg 134  Q
    ||   ||  ||||||||||||||||||||||||    
T  6972493 gagtcaaagactcagttaaaatgggacggaggg 6972461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 3199975 - 3200078
Alignment:
Q  28 aatacttaacaaacacactcaaaaccattttcctccctccttcactaatatat-ttttcttaataaatatgaaatgaacaaataactcagttaaaatggg 126  Q
    |||| |||||||  ||||||||||||||||| ||| ||| |||| | ||| || ||||||||||||||||||||| ||  ||| ||||| ||||||||||    
T  3199975 aatagttaacaatgacactcaaaaccatttttctctctctttcatttatacatcttttcttaataaatatgaaataaatcaatgactcaattaaaatggg 3200074  T
Q  127 acgg 130  Q
    ||||    
T  3200075 acgg 3200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 4283073 - 4282939
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata--tttttcttaataaatatga 98  Q
    ||||||||||||||||| ||||| |||||||||| | ||   || ||||||||||||| ||| ||| || ||| ||| |  ||||||||||||||  | |    
T  4283073 tacatttatgataaagaggaatgcaccaatacttgataagggcattcaaaaccatttttctctctcttttacttatacacttttttcttaataaacgtaa 4282974  T
Q  99 aatgaacaaataactcagttaaaatgggacggagg 133  Q
    ||||| ||||  |||||||||||||| ||||||||    
T  4282973 aatgagcaaaagactcagttaaaatgagacggagg 4282939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38280250 - 38280147
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||| ||||||| |||| |||  |||||||||||||||| ||| ||  |||  | ||| |||||||||||||  | |||||    
T  38280250 tacatttatgataaagaagaatgcaccaatatttaaaaaaggcactcaaaaccatttttctctctatttcctttatacatttttcttaatatgtgtgaaa 38280151  T
Q  101 tgaa 104  Q
    ||||    
T  38280150 tgaa 38280147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9472475 - 9472565
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    ||||||||||||||||||||||| | |||||||| ||||| |||||| |||||||| | ||  ||| |||| | ||| |||||||||||||    
T  9472475 tacatttatgataaagaagaatgtatcaatacttgacaaagacactctaaaccattgttctatctctttcatttatacatttttcttaata 9472565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14890370 - 14890427
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| || ||||||| | ||| |||||||||||||||||    
T  14890370 tacatttatgataaagaagaatgcactaatacttgataaagacactcaaaaccatttt 14890427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43182325 - 43182457
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||| ||||||||||||| ||||||| || ||||| ||||||||||  |||||  || ||| |||  | ||| ||||||||||||   | |||||    
T  43182325 tacatttataataaagaagaatgcaccaatatttgacaaagacactcaaaattatttttttctctctttcctttatacatttttcttaatctgtgtgaaa 43182424  T
Q  101 tgaacaaataactcagttaaaatgggacggagg 133  Q
    || | || | ||||||||||| |||||||||||    
T  43182425 tggaaaactgactcagttaaactgggacggagg 43182457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 13026703 - 13026758
Alignment:
Q  80 tttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||||||||||| ||||||||||||| | |||||||||||| |||| ||||||    
T  13026703 tttttcttaataaatgtgaaatgaacaaaaacctcagttaaaataggacagaggga 13026758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 2882040 - 2882158
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttt-tcttaataaatatgaaat 101  Q
    |||||||||||  | |||||| |||||||||||||||   |||| |||| |||||| ||  ||| |||| | ||| ||||| |||||||| | |||||||    
T  2882040 catttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttctatctctttcatttatacattttttcttaatatacatgaaat 2882139  T
Q  102 gaacaaataactcagttaa 120  Q
    || ||||||||||||||||    
T  2882140 gagcaaataactcagttaa 2882158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 39807269 - 39807323
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||| ||||||||||||| |||||||||| |||||  ||||||||||||||||    
T  39807269 atttattataaagaagaatgcaccaatacttcacaaaggcactcaaaaccatttt 39807323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1908548 - 1908491
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| || |||||||   ||| |||||||||||||||||    
T  1908548 tacatttatgataaagaagaatgcactaatacttgcaaaagacactcaaaaccatttt 1908491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7931550 - 7931493
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| || ||||||| | ||| ||||||||||| |||||    
T  7931550 tacatttatgataaagaagaatgcactaatacttgaaaaagacactcaaaactatttt 7931493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 13222123 - 13222256
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||  ||||||| || | ||   |||||||| ||||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  13222123 catttatgataaagaagaatacaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacattttttcttaataagtgtgaaat 13222222  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
     |   |||  ||| ||||||||||||||||||||    
T  13222223 aagtcaatggctcggttaaaatgggacggaggga 13222256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18460541 - 18460598
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||| ||||||||||| ||||||| || ||||| |||||||||| ||||||    
T  18460541 tacatttatgacaaagaagaatgtaccaatatttgacaaagacactcaaaatcatttt 18460598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 39166672 - 39166615
Alignment:
Q  75 atatatttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggag 132  Q
    |||||||||| ||||||||| |||||||| |||| | |||| ||||||||||||||||    
T  39166672 atatattttttttaataaatgtgaaatgagcaaaaagctcaattaaaatgggacggag 39166615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 3123702 - 3123818
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatga 103  Q
    ||||||||||  |||||||| ||||||||||||  ||  |||| ||||  ||||| ||| || ||||| | ||| |||||||||||||  | ||||||||    
T  3123702 atttatgatagtgaagaatgcaccaatacttaatgaaagcacttaaaattatttttctctctacttcagttatacatttttcttaatatgtgtgaaatga 3123801  T
Q  104 acaaataactcagttaa 120  Q
    |||  ||||||||||||    
T  3123802 acatttaactcagttaa 3123818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 20027201 - 20027069
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaacc-attttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    ||||||||||| |  ||||| | |||||||| ||||| ||||| |||| | ||||| ||| ||| ||| || ||||| |||||||||||  | |||||||    
T  20027201 atttatgataatggtgaatgcagcaatacttgacaaaaacacttaaaaactatttttctctctcattcgcttatatacttttcttaatatgtctgaaatg 20027102  T
Q  103 aacaaataactcagttaaaatgggacggaggga 135  Q
    | ||||||||||| ||||  | |||||||||||    
T  20027101 agcaaataactcacttaatctaggacggaggga 20027069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 28527032 - 28527136
Alignment:
Q  16 gaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactca 115  Q
    |||||||| || ||||||||||||   |||| |||||||||||  |  |||||||| | ||| |||||||||||||  | |||||||| ||||| |||||    
T  28527032 gaagaatgcacgaatacttaacaagagcacttaaaaccatttttttttctccttcatttatacatttttcttaatatgtgtgaaatgagcaaatgactca 28527131  T
Q  116 gttaa 120  Q
    |||||    
T  28527132 gttaa 28527136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 33755312 - 33755400
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    ||||||||||| | ||||||  |||||||||||||||  ||||| |||| |||||| ||| |||||||| | ||| |||| ||||||||    
T  33755312 catttatgatagaaaagaatagaccaatacttaacaataacacttaaaatcatttttctctctccttcatttatacatttgtcttaata 33755400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 36103327 - 36103247
Alignment:
Q  29 atacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaat 109  Q
    |||||||||||  ||||| |||| |||||| ||| |||||||| |  || ||||||||||||| |||||||||||| ||||    
T  36103327 atacttaacaagaacacttaaaatcatttttctctctccttcatttgtacatttttcttaatacatatgaaatgaataaat 36103247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7213528 - 7213662
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||| ||||||||||||| ||||||| || | |||  ||||||||| |||||| ||| ||  |||| | ||| ||||||||||||   | |||||    
T  7213528 tacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcatttatacatttttcttaatctgtgtgaaa 7213627  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||  ||||  |||| ||||| |||||| ||||||    
T  7213628 tgagaaaatggctcaattaaactgggaccgaggga 7213662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 39547922 - 39547964
Alignment:
Q  78 tatttttcttaataaatatgaaatgaacaaataactcagttaa 120  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||    
T  39547922 tatttttcttaataaatatgaaaagaacaaatgactcacttaa 39547964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 6213902 - 6213777
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||| |   |||||| |||||||| || |  ||||| |||| |||||| |||  || |||||||||  |||||||||||||| | |||||||    
T  6213902 catttatgataatggtaaatgaagcaatacttgacgagaacacttaaaatcatttttctctttcattcactaattcatttttcttaataagtgtgaaatg 6213803  T
Q  103 aacaaataactcagttaaaatgggac 128  Q
    | ||||  ||||| ||||| ||||||    
T  6213802 agcaaaagactcacttaaattgggac 6213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 43427061 - 43427008
Alignment:
Q  80 tttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggagg 133  Q
    |||||||||| || ||||||||||   |||| ||||||||||||||||||||||    
T  43427061 tttttcttaaaaagtatgaaatgagtcaatagctcagttaaaatgggacggagg 43427008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 19515936 - 19516050
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||| ||| ||||||||||||||| || || ||||| ||||| ||||| ||| ||| |||  | ||| |||||| ||||||||| | |||||    
T  19515936 catttatgataatgaaaaatgaaccaatacttgac-aagacact-aaaactatttttctctctctttccttcatacattttttttaataaatgtaaaatg 19516033  T
Q  103 aacaaataactcagtta 119  Q
    || |||| |||| ||||    
T  19516034 aataaatgactccgtta 19516050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 23685014 - 23685102
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  | |||||| || ||||||||||||| ||||| ||||| | ||| ||| |||||| | | ||| |||||||||||||    
T  23685014 catttatgatagtggagaatgcactaatacttaacaaaaacacttaaaactaattttctctctcctttatttatacatttttcttaata 23685102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 40965093 - 40965157
Alignment:
Q  27 caatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    ||||||||||||||  |||| ||||| ||||| ||| |||||||| | ||| |||||||||||||    
T  40965093 caatacttaacaaatgcacttaaaactatttttctctctccttcatttatacatttttcttaata 40965157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 43950476 - 43950400
Alignment:
Q  27 caatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatga 103  Q
    |||||||||||||| ||| | ||||| ||||| ||| ||| |||||| ||| |||||| ||||||| | ||||||||    
T  43950476 caatacttaacaaaaacatttaaaactatttttctctctctttcacttatacattttttttaataagtgtgaaatga 43950400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21585464 - 21585330
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| |||  |||||||||||||||||||||| ||||||| || ||    
T  21585464 tacatttatgataaagaagaatgaaccaataattaacaaagacactcaaaatcatttttctctgtccttcactaatatatttttctcaataaatgtggaa 21585365  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||  ||||  |||| ||||| ||||| |||||||    
T  21585364 tgagtaaattgctcaattaaattgggagggaggga 21585330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 48409637 - 48409773
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccat-tttc-ctccctccttcactaatatatttttcttaataaatatga 98  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||||||||||| || |||| ||| ||| |||| | ||| |||||||||||||  | |||    
T  48409637 tacatttatgataaagaagaatccaccaatacttgacaaagacactcaaaacaatctttctctctctctttcatttatacatttttcttaatatgtgtga 48409736  T
Q  99 aatgaacaaataactcagttaaaatgggacggaggga 135  Q
    || |  ||| || |||||||||| |||||||||||||    
T  48409737 aaagctcaactagctcagttaaattgggacggaggga 48409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29858919 - 29858864
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatt 56  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  29858919 tacatttatgataaagaagaatgtaccaatacttgacaaaaacactcaaaaccatt 29858864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53754118 - 53754061
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||    
T  53754118 tacatttatgataaagaagaatgcaccaatacttaccaaagacactcaaaatcatttt 53754061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 8769355 - 8769406
Alignment:
Q  80 tttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacgga 131  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  8769355 tttttcttaatatgtatgaaatgaacaaaaaactcagttaaaatgggacgga 8769406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 51636903 - 51636842
Alignment:
Q  48 aaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaat 109  Q
    ||||||||||| ||| |||||||||| | | |||||||||||||| ||||||||||||||||    
T  51636903 aaaaccatttttctctctccttcacttaaacatttttcttaataattatgaaatgaacaaat 51636842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 36315784 - 36315741
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactc 47  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  36315784 atttatgataaagaagaatgtaccaatacttaacaaagacactc 36315741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 53876490 - 53876371
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||  | | |||| || |||| ||||||||  |||| |||| ||||||  || |||||||| | ||| |||||||||||||  |||||||    
T  53876490 tacatttatgatagtggaaaatgcacaaatatttaacaaaagcacttaaaatcatttttttcactccttcatttatacatttttcttaatatctatgaaa 53876391  T
Q  101 tgaacaaataactcagttaa 120  Q
    | ||||||| ||||||||||    
T  53876390 taaacaaatgactcagttaa 53876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 2868644 - 2868746
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagt 117  Q
    |||||| | |||||| |||||||   ||| ||||||||||| ||| |||||||| | ||| |||||||||||||  | |||||||| ||||| |||||||    
T  2868644 agaatgcagcaatacataacaaaagaacttaaaaccatttttctctctccttcatttatacatttttcttaatatgtgtgaaatgagcaaatgactcagt 2868743  T
Q  118 taa 120  Q
    |||    
T  2868744 taa 2868746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51165005 - 51165055
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaa 51  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||||||||    
T  51165005 tacatttatgataaagaagaatgcaccaatacttgataaagacactcaaaa 51165055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 54122276 - 54122170
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||  | |||||| |||||||||||||||| ||| | ||||| ||||| ||| |||||||| | ||| |||| ||||||||  | |||||||    
T  54122276 catttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttttctctctccttcatttatacatttgtcttaatatgtgtgaaatg 54122177  T
Q  103 aacaaat 109  Q
    || ||||    
T  54122176 aaaaaat 54122170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41287315 - 41287387
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcact 73  Q
    |||||||||||||||||| |||| | |||||||| ||||| | | ||||||||||||| ||| ||| ||||||    
T  41287315 tacatttatgataaagaataatgcatcaatacttgacaaagatagtcaaaaccatttttctctctctttcact 41287387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 17777031 - 17776916
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagt 117  Q
    |||||| || ||||||||| |||  |||  ||||||||||| ||| ||| |||| | ||| |||||| ||||||  | |||||||| ||||| |||||||    
T  17777031 agaatgcacaaatacttaaaaaaagcacctaaaaccatttttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatgactcagt 17776932  T
Q  118 taaaatgggacggagg 133  Q
    |||  |||||||||||    
T  17776931 taatctgggacggagg 17776916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 19078332 - 19078217
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagt 117  Q
    |||||| || ||||||||| |||  |||  ||||||||||| ||| ||| |||| | ||| |||||| ||||||  | |||||||| ||||| |||||||    
T  19078332 agaatgcacaaatacttaaaaaaagcacctaaaaccatttttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatgactcagt 19078233  T
Q  118 taaaatgggacggagg 133  Q
    |||  |||||||||||    
T  19078232 taatctgggacggagg 19078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 32977844 - 32977710
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||||||| |||| | |||||||| | |||  |||||||||| ||||| ||||||| ||   | ||| | ||||||||||   | |||||    
T  32977844 tacatttatgataaagaaaaatgcatcaatacttgaaaaatgcactcaaaactatttttctccctctttactttatacacttttcttaatccgtgtgaaa 32977745  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||| ||||  |||||||||| || ||| ||||||    
T  32977744 tgaaaaaatggctcagttaaactgagacagaggga 32977710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 36097692 - 36097590
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagt 117  Q
    |||||| ||| |||||||||||    ||| ||||||||||| ||| |||||||| | |||  || |||||||||  |||||||||| ||||| |||||||    
T  36097692 agaatgcaccgatacttaacaagagtacttaaaaccatttttctctctccttcatttatacgttcttcttaatatgtatgaaatgagcaaatgactcagt 36097593  T
Q  118 taa 120  Q
    |||    
T  36097592 taa 36097590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1334835 - 1334802
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatactt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  1334835 tacatttatgataaagaagaatgcaccaatactt 1334802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 9218200 - 9218288
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaata 91  Q
    ||||||||||||  ||||||| |||||||||||||  | ||||||||||| ||||| ||| ||| |||||| ||| | ||||||||||||    
T  9218200 catttatgataagaaagaatgcaccaatacttaac-gagacactcaaaactatttttctctctctttcacttatacactttttcttaata 9218288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 11251179 - 11251078
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||  | |||||| |||||||||||||||   |||| |||| ||||||  || ||| |||| | ||| ||||||||||||| || |||||||    
T  11251179 catttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttttctctcattcatttatacatttttcttaatatatgtgaaatg 11251080  T
Q  103 aa 104  Q
    ||    
T  11251079 aa 11251078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32827358 - 32827254
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||  | |||||| |||||||| ||||||   |||| ||||| |||||  || |||||||| | ||| |||||||||||||  | |||||    
T  32827358 tacatttatgatagtggagaatgcaccaatacgtaacaagtgcacttaaaactatttttttctctccttcatttatacatttttcttaatacgtgtgaaa 32827259  T
Q  101 tgaac 105  Q
    |||||    
T  32827258 tgaac 32827254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39144698 - 39144742
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacac 45  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||||    
T  39144698 tacatctatgataaaggagaatgcaccaatacttaacaaagacac 39144742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 39866605 - 39866517
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  | |||||  ||||||||||||||||  |||| ||||| ||||| |||  ||||||| | ||| |||||||||||||    
T  39866605 catttatgatagtggagaatacaccaatacttaacaaaatcacttaaaactatttttctctttccttcatttatacatttttcttaata 39866517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 43639568 - 43639480
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  | | |||| | |||||||||||||   |||| ||||||||||| ||| |||||||| | |||||||| ||||||||    
T  43639568 catttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttttctctctccttcatttatatatttgtcttaata 43639480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 46785970 - 46785914
Alignment:
Q  64 ctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaa 120  Q
    |||||| ||||||| ||||||||||||| || ||||||||  |||| ||||||||||    
T  46785970 ctcctttactaatacatttttcttaatatatgtgaaatgagtaaatgactcagttaa 46785914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32776036 - 32776171
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaa 99  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||| |||||||||| ||| | ||||||||||||  | ||||    
T  32776036 tacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttttctctctccttcacttatacactttttcttaatatgtgtgaa 32776135  T
Q  100 atgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||| ||||   |||| ||| ||||| |||||||||    
T  32776136 atgagcaaaaggctcatttataatggaacggaggga 32776171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2849308 - 2849398
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||| |||||| ||||| ||| ||| |||| | ||| |||||||||||||    
T  2849308 tacatttatgataaagaagaatgcaccaatacttgacaaagacacgcaaaactatttttctctctctttcatttatacatttttcttaata 2849398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 36070162 - 36070247
Alignment:
Q  5 tttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaat 90  Q
    |||||||||||||| |||| ||||||| || ||||| ||||||||||||||||||||| ||| |||| | ||| ||||||||||||    
T  36070162 tttatgataaagaataatgcaccaatatttgacaaagacactcaaaaccattttcctctctctttcatttatacatttttcttaat 36070247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 45890889 - 45890793
Alignment:
Q  24 aaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaa 120  Q
    |||||||||||||||||  || | ||||||||||| ||| |||||||  | ||| |||||||||||||  | |||||||||||||||||||||||||    
T  45890889 aaccaatacttaacaaaagcatttaaaaccatttttctctctccttcttttatacatttttcttaatacgtgtgaaatgaacaaataactcagttaa 45890793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 29997081 - 29996950
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||| |||||||  ||| ||||||||||||| ||  ||| |||||| ||| | ||||||||||||| | ||||||    
T  29997081 catttatgataaagaagaatgcaccaataattaacaaggacattcaaaaccatttttctttctctttcacttatacactttttcttaataagtgtgaaat 29996982  T
Q  102 gaacaaataactcagttaaaatgggacggagg 133  Q
    ||   ||   |||||||||||| |||||||||    
T  29996981 gagtcaaaggctcagttaaaataggacggagg 29996950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 47238272 - 47238403
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||  || | ||   |||||||||||||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  47238272 catttatgataaagaagaatgcaccaattgttgataagggcactcaaaaccatttttctctctctttcacttatacactttttcttaataagtgtgaaat 47238371  T
Q  102 gaacaaataactcagttaaaatgggacggagg 133  Q
    || | ||| |||| |||||||||| |||||||    
T  47238372 gagccaatgactcggttaaaatggaacggagg 47238403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 27234558 - 27234685
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||  | |||||| | |||||||||||||| ||||| ||||| |||||| ||  || |||| | ||| |||||||||||||  | |||||||    
T  27234558 catttatgatagtggagaatgcatcaatacttaacaaaaacacttaaaacaattttc-tctgtcattcatttatacatttttcttaatatgtgtgaaatg 27234656  T
Q  103 aacaaataactcagttaaaatgggacgga 131  Q
    ||||||| |||||||||| ||| ||||||    
T  27234657 aacaaatgactcagttaatatgagacgga 27234685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 37264368 - 37264499
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    |||||||||||||||  |||| | |||||||| ||||   ||||||||||||||||  || ||| |||||| ||||| ||||||||||||  | ||||||    
T  37264368 catttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttt--tctctctttcacttatatactttttcttaatatgtgtgaaat 37264465  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    || ||||   |||| |||||||||||||||||||    
T  37264466 gagcaaaaggctcacttaaaatgggacggaggga 37264499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 47454057 - 47454147
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||||  | |||||| |||||||||||||||   |||| ||||| ||||| ||| |||||||| | |||||||||||||||||    
T  47454057 tacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattttactctctccttcatttatatatttttcttaata 47454147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 23186150 - 23186085
Alignment:
Q  55 ttttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaa 120  Q
    |||| ||| |||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  23186150 tttttctctctccttcatttatatatttttcttaatatatatgaaatgagcaaatgactcagttaa 23186085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 32972070 - 32971937
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatattttt-cttaataaatatgaaat 101  Q
    ||||||||| ||| ||||||| ||||||| || | ||   |||||||||||||||| ||| ||| |||||| ||| |||||| |||||||| | ||||||    
T  32972070 catttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcacttatacattttttcttaataagtgtgaaat 32971971  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   ||| ||||| ||||||||| |||||||||    
T  32971970 gagtcaatgactcaattaaaatggaacggaggga 32971937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 33774071 - 33773963
Alignment:
Q  27 caatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatgaacaaataactcagttaaaatgg 125  Q
    |||||||||||||  ||||||||||| ||||| ||| ||| |||||| ||| | |||||||||||| || |||||||||  || |  |||||||||||||    
T  33774071 caatacttaacaag-acactcaaaactatttttctctctctttcacttatacactttttcttaatatatgtgaaatgaattaaaagttcagttaaaatgg 33773973  T
Q  126 gacggaggga 135  Q
    ||||||||||    
T  33773972 gacggaggga 33773963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 37490670 - 37490553
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||  | |||||| |||||||||||| ||| ||||| |||| |||||| ||| |||||||| | ||| ||||||||||| |  | |||||||    
T  37490670 catttatgatagtggagaatgcaccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatttatacatttttcttaacatgtgtgaaatg 37490571  T
Q  103 aacaaataactcagttaa 120  Q
    || |||| ||||| ||||    
T  37490570 aataaatgactcacttaa 37490553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23111143 - 23111023
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaa 99  Q
    ||||||||||||||||||||||| ||||||| || | ||| ||| |||||| |||||| ||| ||  |||| | ||| | ||||||||||||| ||||||    
T  23111143 tacatttatgataaagaagaatgcaccaatagttgataaagacattcaaaatcatttttctctctatttcatttatacattttttcttaataagtatgaa 23111044  T
Q  100 atgaacaaataactcagttaa 120  Q
    ||||   |||| |||||||||    
T  23111043 atgagttaatagctcagttaa 23111023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27337927 - 27337871
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattt 57  Q
    |||||||||||||||||| |||| |||||||||| ||||| ||||||||||| ||||    
T  27337927 tacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaactattt 27337871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 29645269 - 29645157
Alignment:
Q  20 aatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagtta 119  Q
    |||| |||||||||||||||  ||||| ||||  | ||| ||| ||||||||| | || |||||||||||||| |||||||| |||||| | |||| |||    
T  29645269 aatgcaccaatacttaacaagaacacttaaaattaattttctctctccttcaccattaaatttttcttaataattatgaaataaacaaaaagctcactta 29645170  T
Q  120 aaatgggacggag 132  Q
    || ||||| ||||    
T  29645169 aattgggaaggag 29645157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 11616632 - 11616748
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagt 117  Q
    |||||| |||||||||||||||   |||| ||||||||||| ||| |||||||| | ||| |||||| ||||||  | |||||||| |||||  ||||||    
T  11616632 agaatgcaccaatacttaacaagagcacttaaaaccatttttctctctccttcatttatacattttt-ttaatatgtgtgaaatgagcaaatggctcagt 11616730  T
Q  118 taaaatgggacggaggga 135  Q
    |||   ||||||||||||    
T  11616731 taatccgggacggaggga 11616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 17266082 - 17266198
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||  |||||||| |||||||||||| ||| |||||  |||||||||| ||| || |||| || | | |||||||||||||  | ||||| |    
T  17266082 catttatgatagtgaagaatgcaccaatacttaataaaaacactttaaaccatttttctctcttcttcgcttacacatttttcttaatatgtttgaaa-g 17266180  T
Q  103 aacaaataactcagttaa 120  Q
    ||||||| |||| |||||    
T  17266181 aacaaatgactcggttaa 17266198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45218212 - 45218155
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| |||||||||| | |||  |||||||||| |||||    
T  45218212 tacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttt 45218155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 43007950 - 43008004
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||| |||| || ||||||| ||||| ||||||||||| |||||    
T  43007950 atttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaactatttt 43008004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 44604528 - 44604442
Alignment:
Q  5 tttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||  | ||||| ||||||||||||||||  ||||| |||| |||||| ||| |||||||| | ||| |||| ||||||||    
T  44604528 tttatgatagtggagaataaaccaatacttaacaagaacacttaaaatcatttttctctctccttcatttatacatttgtcttaata 44604442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 7425930 - 7425797
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaa-caaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaat 101  Q
    |||||||||||  | |||||| |||||||||||| |||  ||||| ||||||||||| ||| ||| |||| | ||| |||| ||||||||  | ||||||    
T  7425930 catttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcatttatacatttgtcttaatacgtgtgaaat 7425831  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||| ||||  ||||| |||   ||||||||||||    
T  7425830 gaaaaaatggctcagctaattcgggacggaggga 7425797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18731492 - 18731549
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||  | |||||||| | ||| ||||||||||| |||||    
T  18731492 tacatttatgataaagaagaattcatcaatacttgataaagacactcaaaacgatttt 18731549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 21446492 - 21446613
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaata-tatttttcttaataaatatgaaatg 102  Q
    |||||||||||| ||||||| || |||| |||| ||  ||||||||||  ||||| ||| ||| |||||| |||  |||||||||||||| ||| |||||    
T  21446492 atttatgataaaaaagaatgcactaataattaataaggacactcaaaattatttttctctctctttcacttatacaatttttcttaataagtataaaatg 21446591  T
Q  103 aacaaataactcagttaaaatg 124  Q
    | | ||  ||| ||||||||||    
T  21446592 agccaaggactaagttaaaatg 21446613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 31549613 - 31549556
Alignment:
Q  64 ctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaa 121  Q
    ||||||||||||||| ||||||||||||| | | |||||| ||||  |||||||||||    
T  31549613 ctccttcactaatatttttttcttaataagtgtaaaatgagcaaaagactcagttaaa 31549556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34064268 - 34064324
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||  ||||||| ||||||||||||| || ||||||||||| |||||    
T  34064268 tacatttatgataagaaagaatgcaccaatacttaac-aagacactcaaaactatttt 34064324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5724761 - 5724658
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||  | |||||| || ||||||||||||   |||| ||||| ||||| ||| |||||||| | ||| |||||||||||||  | |||||    
T  5724761 tacatttatgatagtggagaatgcactaatacttaacaagg-cacttaaaactatttttctctctccttcatttatacatttttcttaatacgtgtgaaa 5724663  T
Q  101 tgaac 105  Q
    |||||    
T  5724662 tgaac 5724658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 23058874 - 23058961
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  | |||||| ||||||||| |||||  ||||| ||||| ||||| ||| ||| |||| | |||||||||||||||||    
T  23058874 catttatgatagtggagaatgcaccaatact-aacaagaacacttaaaactatttttctctctctttcatttatatatttttcttaata 23058961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24288476 - 24288532
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattt 57  Q
    ||||||||||||||||||||||| || ||||||| | |||  |||||||||| ||||    
T  24288476 tacatttatgataaagaagaatgcacaaatacttgaaaaaggcactcaaaactattt 24288532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 10843 - 10713
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcact--aatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||||||||| || | ||  ||||||||| ||||||| ||| ||| ||||||   | || ||||||||||||| | |||||    
T  10843 catttatgataaagaagaatgaaccaatagttgataaggacactcaaacccatttttctctctctttcacttacacatttttttcttaataactgtgaaa 10744  T
Q  101 tgaacaaataactcagttaaaatgggacgga 131  Q
    ||| | ||| |||||||||||||||||||||    
T  10743 tgagccaatgactcagttaaaatgggacgga 10713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 4357623 - 4357739
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatga 103  Q
    ||||||||||  |||||||  |||||||||||||||| ||||| |||| ||| || ||| |||||||| | ||||||||||||||||| |||||||||||    
T  4357623 atttatgatagtgaagaatccaccaatacttaacaaaaacacttaaaatcatctttctctctccttcatttatatatttttcttaatatatatgaaatga 4357722  T
Q  104 acaaataactcagttaa 120  Q
       ||| ||||||||||    
T  4357723 gtcaatgactcagttaa 4357739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 28330849 - 28330982
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||| || | ||   |||||||| ||||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  28330849 catttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacactttttcttaataagtgtgaaat 28330948  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   |||  ||||||||||||||||||||||||    
T  28330949 gagtcaatggctcagttaaaatgggacggaggga 28330982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 22872440 - 22872306
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaaca--cactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||| | |||||| |||||||||| ||||||   |||| ||||||||||| ||| || ||||||| ||| |||||||||||||  | |||||    
T  22872440 catttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaaccatttttctctcttcttcacttatacatttttcttaatatgtgtgaaa 22872341  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||| |||||  |||| ||||  |||||||||||||    
T  22872340 tgagcaaatggctcacttaatttgggacggaggga 22872306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 25902513 - 25902383
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatg 102  Q
    |||||| | ||||||||||| || ||||||||||||| ||||||||||||||||| || |||| |||||| ||| | ||||||||||||  | |||||||    
T  25902513 atttataacaaagaagaatgcactaatacttaacaaaaacactcaaaaccattttacttcctctttcacttatacactttttcttaatatgtgtgaaatg 25902414  T
Q  103 aacaaataactcagttaaaatgggacggagg 133  Q
    |  |||   ||||||||  ||||||||||||    
T  25902413 aggaaaatgctcagttattatgggacggagg 25902383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 20964340 - 20964207
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    |||||| |||||||||||||| ||||||| || | ||| |||| ||||  |||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  20964340 catttacgataaagaagaatgcaccaatagttgataaagacacgcaaactcatttttctctctctttcacttatacactttttcttaataagtgtgaaat 20964241  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   || | ||||||||||||||||||||||||    
T  20964240 gagtcaagagctcagttaaaatgggacggaggga 20964207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 9778961 - 9778857
Alignment:
Q  28 aatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaaatggga 127  Q
    ||||||| ||||| | ||| ||||| ||||| |||  ||||||||||||||| |||||||||||| | ||||||||| ||| || ||| ||||| |||||    
T  9778961 aatacttgacaaagagacttaaaacaatttttctctttccttcactaatatacttttcttaataagtgtgaaatgaaaaaaaaaatcatttaaattggga 9778862  T
Q  128 cggag 132  Q
    |||||    
T  9778861 cggag 9778857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 12619792 - 12619859
Alignment:
Q  53 cattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaa 120  Q
    |||||| ||| ||| |||||| ||| |||||||||||||| |||||||||||||||||||||| ||||    
T  12619792 catttttctcgctctttcacttatacatttttcttaataagtatgaaatgaacaaataactcacttaa 12619859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 52677085 - 52676978
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||| ||  |||| | ||||||||| |||   |||| |||| |||||| |||  || |||||||||| ||||||||||||||||||||||    
T  52677085 tacatttatgataatgataaatgcatcaatacttatcaagagcacttaaaatcatttttctctttcattcactaatacatttttcttaataaatatgaaa 52676986  T
Q  101 tgaacaaa 108  Q
    ||| ||||    
T  52676985 tgagcaaa 52676978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 28279893 - 28279946
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattt 57  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||| ||||    
T  28279893 atttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaactattt 28279946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44633209 - 44633266
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||| ||||||||||||| |||||||||| ||||| ||||||||||| |||||    
T  44633209 tacatttatcataaagaagaatgcaccaatacttgacaaagacactcaaaactatttt 44633266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 38160203 - 38160087
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatga 103  Q
    ||||||||||| | |||||| | ||||| || ||||| ||||| ||||| ||||| ||| |||||| | | ||| ||||||||||||| |||| ||||||    
T  38160203 atttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttatttatacatttttcttaatatatataaaatga 38160104  T
Q  104 acaaataactcagttaa 120  Q
     ||||| ||||| ||||    
T  38160103 gcaaatgactcacttaa 38160087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 17237098 - 17237209
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||   ||||||  || |||||||||||||  |||| ||||| ||||| ||| |||||||| | |||||||||||||||||  | |||||||    
T  17237098 catttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttatatatttttcttaataggtgtgaaatg 17237197  T
Q  103 aacaaataactc 114  Q
    | ||||| ||||    
T  17237198 agcaaatgactc 17237209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 38319966 - 38320065
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||||||||||| ||||||| || | ||   |||||||| ||||||| ||| ||| |||||| ||| | ||||||||||||||| ||||||    
T  38319966 catttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacactttttcttaataaatgtgaaat 38320065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 49448896 - 49449000
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    ||||||||||||   |||||| || ||||||| ||||   |||| ||||||||||| ||| |||||||||| ||| ||||||||||||  || |||||||    
T  49448896 catttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttatacatttttcttaat--atgtgaaatg 49448993  T
Q  103 aacaaat 109  Q
    |||||||    
T  49448994 aacaaat 49449000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 4360445 - 4360343
Alignment:
Q  18 agaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagt 117  Q
    |||||| ||||||||||||||||  |||| ||||||||||| |||  || |||| | |||  ||||||||||||  | ||||||||||||||  ||||||    
T  4360445 agaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatacttttttcttaatatgtgtgaaatgaacaaatggctcagt 4360346  T
Q  118 taa 120  Q
    |||    
T  4360345 taa 4360343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 10099776 - 10099722
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||| |||| |||||||||||| ||| ||||||||||| |||||    
T  10099776 atttatgataaagaaaaatgcaccaatacttaaaaaatacactcaaaactatttt 10099722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35998171 - 35998121
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaa 51  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||||||||    
T  35998171 tacatttatgataaagaagaatgtaccaatacttgataaagacactcaaaa 35998121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35029088 - 35029145
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| || ||||||| ||||| |||||| |||| |||||    
T  35029088 tacatttatgataaagaagaatgtactaatacttgacaaagacactcgaaactatttt 35029145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39052955 - 39052906
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaa 50  Q
    ||||||||||||||||||||||| |||||||||| | ||| |||||||||    
T  39052955 tacatttatgataaagaagaatgcaccaatacttgataaagacactcaaa 39052906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42051710 - 42051653
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    ||||||||||||||||||||||| ||||||||||   ||| ||||| |||||||||||    
T  42051710 tacatttatgataaagaagaatgcaccaatacttgctaaagacactaaaaaccatttt 42051653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55360402 - 55360345
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||||||||||||  ||||||||| ||||| |||||||  ||||||||    
T  55360402 tacatttatgataaagaagaatgcgccaatacttgacaaagacactcaccaccatttt 55360345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 50714695 - 50714754
Alignment:
Q  61 tccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaa 120  Q
    |||||| |||||| ||| ||||||||||||| ||||||||| ||||||| ||||| ||||    
T  50714695 tccctctttcacttataaatttttcttaatatatatgaaataaacaaatgactcacttaa 50714754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 19688386 - 19688473
Alignment:
Q  19 gaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaa 108  Q
    ||||| || ||||||||||||| |||||||||| ||||||  |  ||| |||||| |||||||||||||||||  |  ||||||||||||    
T  19688386 gaatgcacaaatacttaacaaaaacactcaaaatcattttgtt--ctctttcacttatatatttttcttaatatgtgcgaaatgaacaaa 19688473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 30568734 - 30568816
Alignment:
Q  19 gaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaat 101  Q
    ||||| || ||||||||||||  ||||| ||||||||||| |||  ||||||  | ||| ||||||||||||| |||||||||    
T  30568734 gaatgcactaatacttaacaataacacttaaaaccatttttctctttccttcctttatacatttttcttaatatatatgaaat 30568816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 48400685 - 48400551
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||  | |||||||| | |||  || | |||| |||||| ||| ||| |||| | ||| ||||||||||||   | |||||    
T  48400685 tacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaatcatttttctctctctttcatttatacatttttcttaatctgtgtgaaa 48400586  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||  |||| ||||| ||||| | |||||||||||    
T  48400585 tgagaaaatgactcaattaaactaggacggaggga 48400551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 49812282 - 49812384
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||  | | |||| |||||||||||||||   |||| ||||| |||||  || |||||||| | ||| ||||||||||||| || |||||    
T  49812282 tacatttatgatagtggataatgcaccaatacttaacaagtgcacttaaaactatttttttctctccttcatttataaatttttcttaatacatgtgaaa 49812381  T
Q  101 tga 103  Q
    |||    
T  49812382 tga 49812384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4354501 - 4354558
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||||||| | || ||||||| |||| ||| ||||||||||| |||||    
T  4354501 tacatttatgataaagaatagtgcaccaatatttaaaaaaaacactcaaaactatttt 4354558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13719828 - 13719885
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||||||| |||  | || ||||||||||| ||||||||| |||||||    
T  13719828 tacatttatgataaagaataatacatcattacttaacaaagacactcaaacccatttt 13719885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37787014 - 37787063
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaa 50  Q
    |||||||||| |||||||||||| | || ||||| |||||||||||||||    
T  37787014 tacatttatggtaaagaagaatgcatcactacttgacaaacacactcaaa 37787063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 46958779 - 46958904
Alignment:
Q  5 tttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatga 103  Q
    ||||||||||  | ||||| ||| |||||||||||  ||||||||||| ||||  |||  || |||||| ||| | ||||||||||||  | ||||||||    
T  46958779 tttatgataagaaggaatgcaccgatacttaacaag-acactcaaaactattt--ctctatctttcacttatacactttttcttaatatgtgtgaaatga 46958875  T
Q  104 acaaataactcagttaaaatgggacggag 132  Q
    |||||  |||||||||||| |||||||||    
T  46958876 acaaaatactcagttaaaaggggacggag 46958904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 5499448 - 5499352
Alignment:
Q  40 acacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||||||||| ||||| ||  ||| |||||| ||| | ||||||||||||  | | |||||||||||   ||| ||||||||||||||||||||    
T  5499448 acacactcaaaactatttttctttctctttcacttatacactttttcttaatatgtgtcaaatgaacaaaaggctcggttaaaatgggacggaggga 5499352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 41203805 - 41203909
Alignment:
Q  16 gaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactca 115  Q
    |||||||| | |||||||||||||   |||| ||||||||||| ||  |||||||| | ||| |||||||||||||  | ||||| || ||||| ||| |    
T  41203805 gaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcatttatacatttttcttaatacgtgtgaaacgagcaaatgactta 41203904  T
Q  116 gttaa 120  Q
    |||||    
T  41203905 gttaa 41203909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 55293532 - 55293580
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaac 52  Q
    |||||||||||| ||||||| |||||| |||| |||| |||||||||||    
T  55293532 atttatgataaacaagaatgcaccaattcttatcaaagacactcaaaac 55293580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 14690015 - 14690148
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    ||||||||||||| ||||||| ||||||| || | ||  ||||||||||||||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  14690015 catttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttttctctctctttcacttatacactttttcttaataagtgtgaaat 14690114  T
Q  102 gaacaaataactcagttaaaatgggacggaggga 135  Q
    ||   ||   ||||||||||||||||||||||||    
T  14690115 gagtcaagggctcagttaaaatgggacggaggga 14690148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 27973714 - 27973609
Alignment:
Q  27 caatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaaatggg 126  Q
    |||||||| ||||  ||||| ||||||||||| |||| ||||||||||||| |||||||||||||| | |||||||| ||||   |||| ||||| ||||    
T  27973714 caatacttgacaagaacacttaaaaccatttttctccatccttcactaatacatttttcttaataagtgtgaaatgagcaaaatgctcacttaaattggg 27973615  T
Q  127 acggag 132  Q
    ||||||    
T  27973614 acggag 27973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 28030983 - 28030878
Alignment:
Q  27 caatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaaatggg 126  Q
    |||||||| ||||  ||||| ||||||||||| |||| ||||||||||||| |||||||||||||| | |||||||| ||||   |||| ||||| ||||    
T  28030983 caatacttgacaagaacacttaaaaccatttttctccatccttcactaatacatttttcttaataagtgtgaaatgagcaaaatgctcacttaaattggg 28030884  T
Q  127 acggag 132  Q
    ||||||    
T  28030883 acggag 28030878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 7258419 - 7258287
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||| ||  |||| |||||||||| ||||   | || ||||||||||| |||  ||||||| |||||||||||| ||||||| | ||||||     
T  7258419 catttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctctttccttcattaatatattttttttaataagtgtgaaata 7258320  T
Q  103 aacaaataactcagttaaaatgggacggaggga 135  Q
    | |||| |||||||||||| || ||||||||||    
T  7258319 agcaaagaactcagttaaattgcgacggaggga 7258287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 29730948 - 29730818
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata--tttttcttaataaatatgaaa 100  Q
    |||||||||||  | |||||| |||||||||||||||  ||||| ||||||| ||| ||| |||||||| | |||||  |||||||||||| || | |||    
T  29730948 catttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccacttttctctctccttcatttatatatttttttcttaatacatgtaaaa 29730849  T
Q  101 tgaacaaataactcagttaaaatgggacgga 131  Q
    ||| |||||| |||||||||  |||||||||    
T  29730848 tgagcaaatagctcagttaatctgggacgga 29730818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 32231439 - 32231305
Alignment:
Q  2 acatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaa 100  Q
    |||||||||||||||||||||  | ||||| || | ||   |||||||||||||||||||| ||| |||||| ||| | ||||||||||||||| |||||    
T  32231439 acatttatgataaagaagaatacatcaatagttgataagggcactcaaaaccattttcctctctctttcacttatacattttttcttaataaatgtgaaa 32231340  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    |||   ||   |||| |||||||||||||||||||    
T  32231339 tgagacaagggctcaattaaaatgggacggaggga 32231305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40077804 - 40077714
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||  || ||| |||| | ||| | |||||||||||    
T  40077804 tacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacacttttcttaata 40077714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 5392104 - 5392236
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||  | |||||| |||||||||| |||||  |||| ||||||||||| ||| |||||||| | ||| |||| ||||||||  | |||||||    
T  5392104 catttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcatttatacatttgtcttaataggtgtgaaatg 5392203  T
Q  103 aacaaataactcagttaaaatgggacggaggga 135  Q
    | |||||  |||||||||   ||||||||||||    
T  5392204 agcaaatggctcagttaatccgggacggaggga 5392236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 15559160 - 15559055
Alignment:
Q  25 accaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaataactcagttaaaatg 124  Q
    |||||||||| ||||  ||||| |||| ||||||  || |||||||||||||| |||||||||||||||| || ||||||||||   |||| ||||| ||    
T  15559160 accaatacttgacaagaacacttaaaatcatttttgtctctccttcactaatacatttttcttaataaatgtg-aatgaacaaaatgctcacttaaattg 15559062  T
Q  125 ggacgga 131  Q
    |||||||    
T  15559061 ggacgga 15559055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 27868377 - 27868259
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatg 102  Q
    |||||||||||| ||  |||| | |||||||| ||||  ||||  ||||||||||| |||| || |||||||||| |||||||||||||| | |||||||    
T  27868377 catttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttttctccatcattcactaatacatttttcttaataagtgtgaaatg 27868278  T
Q  103 aacaaataactcagttaaa 121  Q
    | ||||  ||||| |||||    
T  27868277 agcaaaatactcacttaaa 27868259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8618181 - 8618238
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||| |||||| ||||    
T  8618181 tacatttatgataaagaataatgcaccaatacttaacaaaaacacttaaaaccttttt 8618238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 27875170 - 27875089
Alignment:
Q  27 caatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaa 108  Q
    |||||||| ||||  ||| | ||||||||||| |||| | ||||||||||| |||||| ||||||||| |||||||||||||    
T  27875170 caatacttgacaagaacatttaaaaccatttttctccattcttcactaatacattttttttaataaatgtgaaatgaacaaa 27875089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 28015347 - 28015266
Alignment:
Q  27 caatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaatgaacaaa 108  Q
    |||||||| ||||  ||| | ||||||||||| |||| | ||||||||||| |||||| ||||||||| |||||||||||||    
T  28015347 caatacttgacaagaacatttaaaaccatttttctccattcttcactaatacattttttttaataaatgtgaaatgaacaaa 28015266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29638354 - 29638411
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatttt 58  Q
    |||||||||||||||||| ||||||||||||||| |||||  || |||||||||||||    
T  29638354 tacatttatgataaagaataatgaaccaatacttgacaaaggcattcaaaaccatttt 29638411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28791361 - 28791495
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||||||||||||||| |||||||||| | |||  |||||||||| ||||| ||| ||| ||   | ||| | ||||||||||   | |||||    
T  28791361 tacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttactttatacacttttcttaatctgtgtgaaa 28791460  T
Q  101 tgaacaaataactcagttaaaatgggacggaggga 135  Q
    || | || |  |||||||||| |||||||||||||    
T  28791461 tggaaaactggctcagttaaactgggacggaggga 28791495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 39998216 - 39998346
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||||||||||||  | ||||||| | ||| ||||| |||| |||||| ||| ||| |||| | |||   |||||||||||  |||||||    
T  39998216 tacatttatgataaagaagaatgctcaaatacttgataaagacacttaaaatcatttttctctctctttcatttatactcttttcttaatatgtatgaaa 39998315  T
Q  101 tgaacaaataactcagttaaaatgggacgga 131  Q
    |||  ||||  |||| ||||| |||||||||    
T  39998316 tgagaaaatggctcaattaaactgggacgga 39998346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 2195523 - 2195611
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaata 91  Q
    ||||||||||||  ||||||| ||||||||||||| || ||||||||||| ||||| ||| ||| |||||| ||| | ||||||||||||    
T  2195523 catttatgataagaaagaatgcaccaatacttaac-aagacactcaaaactatttttctctctctttcacttatacactttttcttaata 2195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 1494300 - 1494172
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatattttt-cttaataaatatgaaat 101  Q
    ||||||||||||||||||||| | ||||| || | ||   ||||||||| |||||| ||| ||| |||||  ||| |||||| |||||||| | ||||||    
T  1494300 catttatgataaagaagaatgcatcaataattgataagggcactcaaaatcatttttctcactctttcacatatacatttttccttaataagtgtgaaat 1494201  T
Q  102 gaacaaataactcagttaaaatgggacgg 130  Q
    || |  || ||| ||||||||||||||||    
T  1494200 gagccgatgactaagttaaaatgggacgg 1494172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 44790476 - 44790372
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    |||||||||||||  | |||||| |||||||||||||||   |||| ||||| ||||| ||| |||||||| | ||| |||| ||||||||  | |||||    
T  44790476 tacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttatacatttgtcttaatacgtgtgaaa 44790377  T
Q  101 tgaac 105  Q
    |||||    
T  44790376 tgaac 44790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 33743832 - 33743933
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatg 102  Q
    |||||||||||||||||||| || |||| || | ||  ||||||||| ||||||| ||| ||| |||| | ||| | ||||||||||||| | |||||||    
T  33743832 atttatgataaagaagaatgcacaaatagttgataagtacactcaaacccatttttctctctctttcatttatacactttttcttaataagtgtgaaatg 33743931  T
Q  103 aa 104  Q
    ||    
T  33743932 aa 33743933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 45420991 - 45420890
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaat 101  Q
    |||||||||||||||||||||  |||| | || ||||   |||||||| ||||||| ||| ||| |||||| ||| | ||||||||||||| | ||||||    
T  45420991 catttatgataaagaagaatgctccaaaagttgacaagggcactcaaacccatttttctctctctttcacttatacactttttcttaataagtgtgaaat 45420892  T
Q  102 ga 103  Q
    ||    
T  45420891 ga 45420890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 32241476 - 32241388
Alignment:
Q  3 catttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatatatttttcttaata 91  Q
    |||||||||||  |||||||| | |||||||||||||  ||||| |||| ||||||  || |||||||| | ||| |||| ||||||||    
T  32241476 catttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcatttttatctctccttcatttatacatttgtcttaata 32241388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 37219815 - 37219680
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaaca--aac-acactcaaaaccattttcctccctccttcactaatatatttttcttaataaatatgaaa 100  Q
    ||||||||||| | |||||| ||| ||||||||||  ||| ||||| |||| ||| || ||| |||||||| | ||| |||| ||||||||  | |||||    
T  37219815 atttatgataagggagaatgcacccatacttaacaacaacaacacttaaaatcatatttctctctccttcatttatacatttgtcttaatatgtgtgaaa 37219716  T
Q  101 tgaacaaataactcagttaaaatgggacggagggat 136  Q
    |||| |||| |||||| |||  ||||||||| ||||    
T  37219715 tgaaaaaatgactcagctaatttgggacggatggat 37219680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 352515 - 352465
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaa 51  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  352515 tacatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaa 352465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 621 - 749
Alignment:
Q  4 atttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccattttcctccctccttcactaatata-tttttcttaataaatatgaaatg 102  Q
    |||||||||||||||||||| ||||||| || | ||  ||||||||||||| ||| ||| ||  |||||| ||| | ||||||||||||| | | |||||    
T  621 atttatgataaagaagaatgcaccaatagttgataag-acactcaaaaccaattttctctctttttcacttatacactttttcttaataattgtaaaatg 719  T
Q  103 aacaaataactcagttaaaatgggacggag 132  Q
    ||| || | |||||||||||||| ||||||    
T  720 aaccaagagctcagttaaaatggaacggag 749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12490 - 12435
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaaccatt 56  Q
    ||||||||| ||||||||||||| || ||||||| ||||| |||||||||||||||    
T  12490 tacatttataataaagaagaatgcactaatacttgacaaagacactcaaaaccatt 12435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6454 - 6404
Alignment:
Q  1 tacatttatgataaagaagaatgaaccaatacttaacaaacacactcaaaa 51  Q
    ||||||||||||||||||||||| | |||||||| || || ||||||||||    
T  6454 tacatttatgataaagaagaatgcatcaatacttgactaagacactcaaaa 6404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 220156 - 220209
Alignment:
Q  82 tttcttaataaatatgaaatgaacaaataactcagttaaaatgggacggaggga 135  Q
    ||||||| ||| | |||||||| | |||||||||||||||||| ||||||||||    
T  220156 tttcttagtaagtgtgaaatgagccaataactcagttaaaatgcgacggaggga 220209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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