View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5941-Insertion-1 (Length: 915)

Name: NF5941-Insertion-1
Description: NF5941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5941-Insertion-1
NF5941-Insertion-1
[»] chr1 (76 HSPs)
chr1 (9-713)||(46339331-46340035)
chr1 (464-600)||(6459221-6459357)
chr1 (464-599)||(9109975-9110110)
chr1 (464-599)||(12720813-12720948)
chr1 (464-599)||(45839296-45839431)
chr1 (464-600)||(6412052-6412188)
chr1 (744-915)||(46339131-46339300)
chr1 (474-600)||(19865258-19865384)
chr1 (464-599)||(20408160-20408295)
chr1 (464-599)||(41752437-41752572)
chr1 (474-600)||(28229454-28229580)
chr1 (472-600)||(4340419-4340547)
chr1 (464-600)||(23457901-23458037)
chr1 (464-600)||(38531169-38531305)
chr1 (472-600)||(50845329-50845457)
chr1 (464-599)||(12161818-12161953)
chr1 (472-602)||(41120734-41120864)
chr1 (464-600)||(15243089-15243225)
chr1 (464-599)||(22603552-22603687)
chr1 (474-600)||(46790014-46790140)
chr1 (472-601)||(18894898-18895027)
chr1 (464-600)||(14760871-14761007)
chr1 (464-599)||(22158806-22158941)
chr1 (491-598)||(25787998-25788105)
chr1 (464-599)||(29549422-29549557)
chr1 (464-599)||(48522522-48522657)
chr1 (480-599)||(50092298-50092417)
chr1 (461-600)||(51973425-51973564)
chr1 (464-599)||(52183682-52183817)
chr1 (464-598)||(9259184-9259318)
chr1 (464-601)||(7181553-7181690)
chr1 (472-593)||(46785964-46786085)
chr1 (464-592)||(9464107-9464235)
chr1 (464-599)||(13102320-13102455)
chr1 (464-595)||(16913581-16913712)
chr1 (474-599)||(8940994-8941119)
chr1 (464-600)||(17200009-17200145)
chr1 (472-599)||(9177112-9177239)
chr1 (464-570)||(12174795-12174901)
chr1 (464-582)||(41071852-41071970)
chr1 (464-592)||(18890556-18890684)
chr1 (472-600)||(41063209-41063337)
chr1 (464-599)||(7830035-7830170)
chr1 (464-599)||(9985327-9985462)
chr1 (464-599)||(17661054-17661189)
chr1 (464-570)||(32046880-32046986)
chr1 (499-600)||(27253854-27253955)
chr1 (464-599)||(22789593-22789726)
chr1 (480-599)||(12989872-12989991)
chr1 (480-599)||(19081748-19081867)
chr1 (480-599)||(19129636-19129755)
chr1 (464-598)||(17733954-17734089)
chr1 (483-589)||(30928388-30928494)
chr1 (474-599)||(13308820-13308945)
chr1 (483-600)||(20290320-20290436)
chr1 (474-566)||(41359001-41359094)
chr1 (464-600)||(12369950-12370076)
chr1 (480-599)||(20580929-20581049)
chr1 (480-600)||(46865263-46865383)
chr1 (480-594)||(26825260-26825374)
chr1 (492-600)||(13195615-13195723)
chr1 (480-567)||(13522993-13523080)
chr1 (474-570)||(9882069-9882162)
chr1 (498-600)||(29093553-29093655)
chr1 (475-599)||(45918904-45919028)
chr1 (474-585)||(49881058-49881168)
chr1 (480-600)||(11917806-11917925)
chr1 (484-599)||(12806836-12806952)
chr1 (472-599)||(39748945-39749072)
chr1 (480-600)||(18787912-18788029)
chr1 (461-589)||(6775888-6776015)
chr1 (484-595)||(16258490-16258601)
chr1 (480-526)||(14486705-14486751)
chr1 (472-574)||(30673506-30673608)
chr1 (472-570)||(52621166-52621264)
chr1 (483-556)||(28560305-28560378)
[»] chr6 (80 HSPs)
chr6 (464-603)||(24661005-24661144)
chr6 (464-600)||(11049750-11049886)
chr6 (464-599)||(6598468-6598603)
chr6 (464-599)||(9892967-9893102)
chr6 (465-599)||(26224433-26224567)
chr6 (474-599)||(6605496-6605621)
chr6 (464-601)||(28364915-28365052)
chr6 (464-599)||(495627-495762)
chr6 (464-599)||(2992619-2992754)
chr6 (464-600)||(15364457-15364593)
chr6 (464-596)||(25398006-25398138)
chr6 (464-599)||(12200698-12200833)
chr6 (472-599)||(15448397-15448524)
chr6 (464-602)||(33250705-33250843)
chr6 (464-600)||(1939241-1939377)
chr6 (464-600)||(22579348-22579484)
chr6 (464-602)||(6978283-6978419)
chr6 (464-598)||(27796835-27796969)
chr6 (464-600)||(22083842-22083978)
chr6 (464-599)||(26939591-26939726)
chr6 (480-598)||(5360429-5360547)
chr6 (472-601)||(18492381-18492510)
chr6 (464-596)||(21140943-21141075)
chr6 (464-599)||(2669313-2669448)
chr6 (474-593)||(5192195-5192314)
chr6 (464-599)||(12351586-12351721)
chr6 (464-599)||(12951712-12951847)
chr6 (480-599)||(16250802-16250921)
chr6 (480-599)||(20182165-20182284)
chr6 (480-599)||(22153707-22153826)
chr6 (472-600)||(21990174-21990301)
chr6 (464-599)||(18033526-18033660)
chr6 (474-596)||(11077663-11077785)
chr6 (464-601)||(12160845-12160981)
chr6 (474-602)||(15961404-15961532)
chr6 (472-599)||(14886573-14886700)
chr6 (464-599)||(18048792-18048927)
chr6 (472-599)||(30833960-30834087)
chr6 (490-599)||(15509186-15509295)
chr6 (474-599)||(12499230-12499356)
chr6 (474-599)||(12506559-12506685)
chr6 (474-599)||(12509545-12509671)
chr6 (474-596)||(14872133-14872255)
chr6 (464-570)||(27705426-27705532)
chr6 (492-602)||(28668132-28668242)
chr6 (480-581)||(12845023-12845124)
chr6 (472-603)||(11530237-11530368)
chr6 (492-599)||(17919568-17919675)
chr6 (492-598)||(10458796-10458902)
chr6 (489-599)||(14772690-14772800)
chr6 (480-600)||(10929495-10929616)
chr6 (474-558)||(13145016-13145100)
chr6 (472-599)||(9885255-9885382)
chr6 (485-592)||(9060115-9060222)
chr6 (465-583)||(23281791-23281908)
chr6 (516-600)||(5250195-5250279)
chr6 (484-599)||(21691495-21691611)
chr6 (474-601)||(6065451-6065578)
chr6 (474-593)||(20692817-20692936)
chr6 (464-570)||(343592-343698)
chr6 (464-589)||(22055622-22055747)
chr6 (474-596)||(11350196-11350315)
chr6 (474-570)||(33547560-33547656)
chr6 (484-595)||(12157380-12157491)
chr6 (482-595)||(1954903-1955015)
chr6 (480-593)||(12205191-12205304)
chr6 (480-603)||(16118166-16118289)
chr6 (464-599)||(14036624-14036751)
chr6 (480-601)||(12680184-12680303)
chr6 (498-553)||(19175823-19175878)
chr6 (464-600)||(11431638-11431775)
chr6 (499-555)||(3673177-3673233)
chr6 (484-581)||(2396227-2396325)
chr6 (480-573)||(5270412-5270506)
chr6 (516-601)||(8844166-8844252)
chr6 (539-599)||(13251379-13251439)
chr6 (484-602)||(7000879-7000998)
chr6 (560-602)||(33191180-33191222)
chr6 (465-598)||(28233990-28234123)
chr6 (480-600)||(30745718-30745836)
[»] scaffold0219 (1 HSPs)
scaffold0219 (464-604)||(19607-19747)
[»] chr8 (69 HSPs)
chr8 (464-599)||(24576024-24576159)
chr8 (464-599)||(17810300-17810435)
chr8 (464-599)||(27910764-27910899)
chr8 (464-599)||(27957183-27957318)
chr8 (464-601)||(27869240-27869377)
chr8 (464-599)||(8555304-8555439)
chr8 (464-599)||(22939315-22939450)
chr8 (464-600)||(33652569-33652705)
chr8 (474-600)||(13060930-13061056)
chr8 (464-601)||(18010058-18010195)
chr8 (480-599)||(24193196-24193315)
chr8 (474-600)||(19488060-19488186)
chr8 (464-601)||(19240869-19241006)
chr8 (464-601)||(19314053-19314190)
chr8 (464-599)||(4330980-4331115)
chr8 (464-600)||(3823135-3823271)
chr8 (464-599)||(29350925-29351061)
chr8 (464-599)||(6817056-6817191)
chr8 (472-599)||(11938755-11938881)
chr8 (464-599)||(17824616-17824751)
chr8 (472-603)||(19256222-19256353)
chr8 (464-602)||(21350480-21350618)
chr8 (474-599)||(32247921-32248046)
chr8 (480-600)||(4647754-4647874)
chr8 (464-599)||(43431559-43431694)
chr8 (464-602)||(17103862-17104000)
chr8 (474-603)||(23752282-23752411)
chr8 (472-597)||(37992109-37992234)
chr8 (464-601)||(40289419-40289555)
chr8 (472-600)||(30466953-30467081)
chr8 (492-600)||(30687966-30688074)
chr8 (464-599)||(6816383-6816518)
chr8 (492-599)||(8824855-8824962)
chr8 (472-599)||(25000431-25000558)
chr8 (480-599)||(25655858-25655977)
chr8 (464-597)||(9915043-9915175)
chr8 (472-600)||(24636662-24636791)
chr8 (465-600)||(9631406-9631542)
chr8 (472-599)||(5670169-5670296)
chr8 (484-599)||(16061939-16062054)
chr8 (474-599)||(31399508-31399633)
chr8 (464-600)||(32961661-32961797)
chr8 (513-600)||(42700656-42700743)
chr8 (474-599)||(25273328-25273452)
chr8 (464-599)||(29345073-29345208)
chr8 (498-599)||(8789876-8789977)
chr8 (474-602)||(10917839-10917967)
chr8 (474-601)||(33412975-33413095)
chr8 (519-599)||(25274654-25274734)
chr8 (474-566)||(19493688-19493781)
chr8 (490-599)||(21219240-21219349)
chr8 (474-599)||(26399007-26399132)
chr8 (492-600)||(6084245-6084351)
chr8 (480-601)||(15251620-15251740)
chr8 (464-601)||(18844542-18844679)
chr8 (480-601)||(17003280-17003401)
chr8 (464-560)||(5879206-5879302)
chr8 (474-570)||(41527729-41527825)
chr8 (474-592)||(14304241-14304359)
chr8 (480-599)||(31344172-31344291)
chr8 (504-593)||(35678065-35678154)
chr8 (480-570)||(15289662-15289750)
chr8 (480-570)||(15470031-15470119)
chr8 (503-595)||(2265383-2265474)
chr8 (499-556)||(3692214-3692271)
chr8 (535-602)||(24479810-24479877)
chr8 (552-594)||(6103760-6103802)
chr8 (555-600)||(25651122-25651165)
chr8 (464-570)||(29473329-29473435)
[»] chr7 (68 HSPs)
chr7 (464-599)||(27806022-27806157)
chr7 (464-601)||(15014403-15014540)
chr7 (464-599)||(28800882-28801017)
chr7 (464-599)||(7733312-7733447)
chr7 (464-599)||(22486398-22486533)
chr7 (464-599)||(23232043-23232178)
chr7 (464-599)||(47523650-47523785)
chr7 (465-599)||(6849211-6849345)
chr7 (464-600)||(42926418-42926555)
chr7 (464-599)||(21917334-21917469)
chr7 (474-599)||(3872187-3872312)
chr7 (464-600)||(1842898-1843034)
chr7 (464-599)||(18217833-18217968)
chr7 (472-599)||(24605850-24605977)
chr7 (464-600)||(11036511-11036647)
chr7 (480-599)||(23539252-23539371)
chr7 (464-599)||(23577189-23577324)
chr7 (464-599)||(31425511-31425646)
chr7 (474-600)||(3904477-3904603)
chr7 (464-600)||(20174024-20174160)
chr7 (464-603)||(20429469-20429608)
chr7 (464-599)||(23750736-23750871)
chr7 (464-601)||(37135283-37135420)
chr7 (464-600)||(9698537-9698673)
chr7 (464-600)||(39979623-39979759)
chr7 (464-604)||(40847430-40847570)
chr7 (484-600)||(48933160-48933276)
chr7 (472-599)||(21623033-21623159)
chr7 (461-600)||(33427691-33427829)
chr7 (461-600)||(38057633-38057772)
chr7 (475-599)||(1907370-1907494)
chr7 (480-601)||(2650826-2650947)
chr7 (464-573)||(10050862-10050971)
chr7 (499-599)||(21871607-21871707)
chr7 (480-599)||(23699825-23699944)
chr7 (472-599)||(36993832-36993959)
chr7 (474-600)||(1824199-1824325)
chr7 (472-582)||(36636518-36636628)
chr7 (469-599)||(15969793-15969924)
chr7 (474-601)||(26577279-26577406)
chr7 (474-600)||(4514779-4514905)
chr7 (267-439)||(21440775-21440946)
chr7 (503-601)||(14786633-14786731)
chr7 (464-598)||(24140454-24140588)
chr7 (464-570)||(45664772-45664878)
chr7 (474-599)||(2093362-2093487)
chr7 (480-583)||(31042271-31042374)
chr7 (482-599)||(816191-816308)
chr7 (480-595)||(2457690-2457803)
chr7 (461-557)||(15330247-15330343)
chr7 (472-599)||(20923958-20924085)
chr7 (464-591)||(22501598-22501725)
chr7 (485-595)||(27304895-27305005)
chr7 (464-597)||(32267351-32267483)
chr7 (461-600)||(27130335-27130472)
chr7 (474-599)||(1821996-1822118)
chr7 (480-590)||(11852028-11852138)
chr7 (461-599)||(25777112-25777250)
chr7 (491-598)||(27132722-27132829)
chr7 (472-570)||(11890176-11890274)
chr7 (483-599)||(10222630-10222745)
chr7 (541-599)||(687947-688005)
chr7 (492-590)||(26415456-26415554)
chr7 (533-599)||(38090336-38090402)
chr7 (600-702)||(21440944-21441049)
chr7 (492-598)||(1841784-1841889)
chr7 (506-589)||(8116516-8116599)
chr7 (552-599)||(30908945-30908992)
[»] chr5 (61 HSPs)
chr5 (464-600)||(618298-618434)
chr5 (464-600)||(16121838-16121974)
chr5 (461-599)||(2472714-2472852)
chr5 (464-602)||(17039628-17039766)
chr5 (461-600)||(35620343-35620481)
chr5 (474-600)||(746867-746993)
chr5 (464-600)||(12328225-12328361)
chr5 (464-599)||(8886851-8886986)
chr5 (464-603)||(20959512-20959651)
chr5 (461-600)||(28265474-28265613)
chr5 (464-602)||(33818558-33818696)
chr5 (472-601)||(24138839-24138968)
chr5 (474-599)||(38837671-38837796)
chr5 (464-599)||(12045731-12045866)
chr5 (464-599)||(36196398-36196533)
chr5 (474-600)||(10494751-10494877)
chr5 (464-602)||(17986733-17986871)
chr5 (474-599)||(4125188-4125313)
chr5 (474-598)||(17771969-17772093)
chr5 (464-599)||(23408984-23409120)
chr5 (472-599)||(7888809-7888936)
chr5 (480-599)||(8108860-8108979)
chr5 (464-599)||(25652583-25652718)
chr5 (472-599)||(26708585-26708712)
chr5 (472-599)||(26978319-26978446)
chr5 (464-590)||(23975639-23975765)
chr5 (482-599)||(16631874-16631991)
chr5 (461-599)||(5982646-5982785)
chr5 (464-599)||(15060977-15061112)
chr5 (464-602)||(7003727-7003863)
chr5 (474-600)||(25397787-25397913)
chr5 (474-600)||(40484058-40484184)
chr5 (472-600)||(23423755-23423883)
chr5 (464-599)||(36831890-36832025)
chr5 (464-599)||(13974078-13974213)
chr5 (472-600)||(13620126-13620254)
chr5 (464-600)||(25673228-25673363)
chr5 (480-599)||(36716200-36716319)
chr5 (484-598)||(33734974-33735088)
chr5 (482-599)||(11927786-11927903)
chr5 (492-601)||(17036410-17036519)
chr5 (474-599)||(36597340-36597465)
chr5 (472-599)||(20187941-20188068)
chr5 (464-570)||(17079409-17079515)
chr5 (480-601)||(10420250-10420371)
chr5 (471-600)||(23974575-23974704)
chr5 (464-569)||(33816788-33816893)
chr5 (480-599)||(27428012-27428131)
chr5 (474-596)||(35778155-35778277)
chr5 (472-589)||(3080706-3080823)
chr5 (480-589)||(32726736-32726845)
chr5 (474-570)||(9024227-9024324)
chr5 (484-556)||(31853131-31853203)
chr5 (493-598)||(16472182-16472287)
chr5 (464-601)||(18413560-18413696)
chr5 (555-599)||(29727895-29727939)
chr5 (500-571)||(5043539-5043610)
chr5 (480-571)||(26301923-26302014)
chr5 (560-601)||(19890984-19891025)
chr5 (554-599)||(16464723-16464768)
chr5 (461-522)||(22649406-22649467)
[»] chr2 (54 HSPs)
chr2 (464-599)||(18551253-18551388)
chr2 (464-602)||(14757118-14757256)
chr2 (464-600)||(28841341-28841477)
chr2 (464-600)||(44722932-44723068)
chr2 (464-600)||(32008952-32009089)
chr2 (465-598)||(28319580-28319713)
chr2 (482-599)||(44476375-44476492)
chr2 (464-592)||(32300451-32300579)
chr2 (474-602)||(43408508-43408636)
chr2 (464-599)||(21293711-21293846)
chr2 (472-599)||(41637626-41637753)
chr2 (472-601)||(13788053-13788182)
chr2 (483-599)||(22140364-22140480)
chr2 (472-599)||(12779608-12779735)
chr2 (464-599)||(15636735-15636870)
chr2 (464-599)||(20065074-20065209)
chr2 (461-600)||(27327613-27327752)
chr2 (472-599)||(37552235-37552362)
chr2 (472-599)||(41736180-41736307)
chr2 (473-599)||(13613093-13613219)
chr2 (464-592)||(1141536-1141664)
chr2 (472-599)||(23857958-23858084)
chr2 (464-599)||(30783338-30783473)
chr2 (464-599)||(32185832-32185967)
chr2 (464-598)||(23388379-23388513)
chr2 (472-599)||(29749403-29749530)
chr2 (472-599)||(37723992-37724119)
chr2 (474-599)||(7093578-7093703)
chr2 (464-596)||(28262364-28262496)
chr2 (504-599)||(27039908-27040003)
chr2 (464-599)||(31266354-31266489)
chr2 (464-599)||(8430296-8430431)
chr2 (464-599)||(9004308-9004443)
chr2 (470-601)||(36550842-36550972)
chr2 (498-600)||(26243320-26243422)
chr2 (472-599)||(26687690-26687818)
chr2 (472-599)||(40018810-40018937)
chr2 (480-600)||(2556111-2556231)
chr2 (480-594)||(38362276-38362390)
chr2 (464-537)||(27523011-27523084)
chr2 (464-589)||(44366007-44366132)
chr2 (484-582)||(35697475-35697573)
chr2 (467-600)||(18609517-18609650)
chr2 (480-589)||(18916411-18916519)
chr2 (472-587)||(8763642-8763757)
chr2 (480-570)||(31966554-31966643)
chr2 (500-600)||(36373934-36374034)
chr2 (464-599)||(37802379-37802513)
chr2 (533-593)||(12860235-12860295)
chr2 (482-569)||(13134650-13134737)
chr2 (484-582)||(9590490-9590588)
chr2 (517-599)||(16098917-16098999)
chr2 (533-599)||(22192248-22192314)
chr2 (482-525)||(29998633-29998676)
[»] scaffold0007 (4 HSPs)
scaffold0007 (464-602)||(3746-3884)
scaffold0007 (472-599)||(202786-202913)
scaffold0007 (531-599)||(274665-274733)
scaffold0007 (464-526)||(276207-276269)
[»] chr3 (90 HSPs)
chr3 (464-599)||(8428171-8428306)
chr3 (472-601)||(13921333-13921462)
chr3 (464-600)||(25882570-25882706)
chr3 (464-599)||(17762642-17762777)
chr3 (464-599)||(19063962-19064097)
chr3 (474-599)||(26098823-26098948)
chr3 (464-600)||(26390633-26390769)
chr3 (464-599)||(18091547-18091682)
chr3 (464-599)||(27449088-27449223)
chr3 (472-599)||(48404868-48404995)
chr3 (464-600)||(1310958-1311094)
chr3 (464-600)||(9652578-9652714)
chr3 (464-600)||(18104529-18104665)
chr3 (464-600)||(19269863-19269999)
chr3 (464-599)||(5260937-5261072)
chr3 (474-599)||(5744426-5744551)
chr3 (474-599)||(5781385-5781510)
chr3 (470-599)||(10941665-10941794)
chr3 (464-603)||(11915758-11915897)
chr3 (464-599)||(19223449-19223584)
chr3 (464-599)||(19610338-19610473)
chr3 (472-599)||(21816729-21816856)
chr3 (461-599)||(11837214-11837352)
chr3 (474-600)||(15063991-15064117)
chr3 (474-599)||(1745488-1745612)
chr3 (484-601)||(8546265-8546382)
chr3 (464-600)||(8110339-8110475)
chr3 (464-599)||(11007683-11007818)
chr3 (480-599)||(11219154-11219273)
chr3 (464-599)||(29215992-29216127)
chr3 (474-600)||(13905037-13905163)
chr3 (461-599)||(29956369-29956507)
chr3 (461-599)||(30005524-30005662)
chr3 (474-599)||(43329763-43329888)
chr3 (464-599)||(16299861-16299996)
chr3 (472-599)||(29236052-29236179)
chr3 (474-599)||(23773487-23773612)
chr3 (464-592)||(18539804-18539932)
chr3 (464-599)||(7623531-7623666)
chr3 (472-583)||(28859599-28859710)
chr3 (464-601)||(4393348-4393485)
chr3 (474-599)||(46012728-46012853)
chr3 (464-596)||(28389973-28390105)
chr3 (464-600)||(30219338-30219474)
chr3 (464-599)||(31250088-31250223)
chr3 (464-599)||(36543749-36543884)
chr3 (464-570)||(19545510-19545616)
chr3 (473-599)||(21020074-21020200)
chr3 (474-599)||(3461310-3461435)
chr3 (464-596)||(1628215-1628347)
chr3 (472-600)||(11085341-11085469)
chr3 (464-599)||(26830441-26830577)
chr3 (474-601)||(5565732-5565859)
chr3 (464-599)||(49915451-49915586)
chr3 (464-570)||(17582330-17582436)
chr3 (464-590)||(29704041-29704167)
chr3 (474-599)||(17269604-17269729)
chr3 (474-599)||(21490034-21490159)
chr3 (465-600)||(10803721-10803857)
chr3 (464-599)||(18380024-18380159)
chr3 (464-599)||(36564439-36564574)
chr3 (472-599)||(47263265-47263392)
chr3 (472-601)||(21088760-21088887)
chr3 (480-602)||(46942503-46942625)
chr3 (474-599)||(6088228-6088353)
chr3 (474-599)||(50665636-50665761)
chr3 (472-599)||(10772053-10772181)
chr3 (472-599)||(29451102-29451230)
chr3 (464-599)||(8543469-8543603)
chr3 (480-599)||(23217208-23217327)
chr3 (464-599)||(31433737-31433872)
chr3 (480-570)||(6718726-6718816)
chr3 (472-601)||(27182656-27182783)
chr3 (490-599)||(37283549-37283658)
chr3 (504-599)||(20761950-20762045)
chr3 (472-598)||(27968923-27969049)
chr3 (464-570)||(27212810-27212916)
chr3 (464-599)||(15490035-15490169)
chr3 (499-599)||(15501551-15501652)
chr3 (461-594)||(26963254-26963387)
chr3 (492-600)||(6447245-6447353)
chr3 (474-570)||(50240756-50240852)
chr3 (482-600)||(13615433-13615551)
chr3 (482-568)||(27711199-27711285)
chr3 (472-600)||(20088408-20088541)
chr3 (464-583)||(20615359-20615478)
chr3 (472-569)||(45304342-45304439)
chr3 (474-549)||(23233213-23233288)
chr3 (556-597)||(11386427-11386468)
chr3 (472-519)||(35579605-35579652)
[»] scaffold0001 (3 HSPs)
scaffold0001 (464-602)||(8107-8245)
scaffold0001 (464-602)||(21839-21977)
scaffold0001 (464-599)||(84307-84442)
[»] chr4 (64 HSPs)
chr4 (464-599)||(22168270-22168405)
chr4 (464-600)||(2275676-2275813)
chr4 (464-594)||(37378628-37378758)
chr4 (464-600)||(55309211-55309348)
chr4 (472-603)||(13028812-13028943)
chr4 (472-599)||(19839189-19839316)
chr4 (472-599)||(54539296-54539423)
chr4 (464-601)||(32175735-32175872)
chr4 (472-600)||(4586757-4586885)
chr4 (472-600)||(25026567-25026695)
chr4 (461-600)||(44783481-44783621)
chr4 (474-599)||(9670479-9670604)
chr4 (474-599)||(29625337-29625462)
chr4 (464-599)||(5399611-5399746)
chr4 (472-599)||(5473859-5473986)
chr4 (480-599)||(9238625-9238744)
chr4 (464-599)||(27040025-27040160)
chr4 (464-602)||(30268985-30269123)
chr4 (464-602)||(30283066-30283204)
chr4 (464-602)||(46286226-46286364)
chr4 (474-599)||(38645762-38645887)
chr4 (464-600)||(13564914-13565050)
chr4 (464-600)||(45532578-45532714)
chr4 (472-599)||(18714912-18715039)
chr4 (461-600)||(19680423-19680562)
chr4 (464-602)||(12071964-12072102)
chr4 (474-600)||(38619859-38619985)
chr4 (474-599)||(7111946-7112071)
chr4 (474-599)||(30507999-30508124)
chr4 (464-600)||(22128311-22128447)
chr4 (472-598)||(4627079-4627205)
chr4 (464-601)||(18051841-18051978)
chr4 (464-589)||(25147723-25147848)
chr4 (464-599)||(33914061-33914196)
chr4 (464-570)||(22156630-22156736)
chr4 (474-599)||(9239281-9239406)
chr4 (472-600)||(16915379-16915507)
chr4 (472-599)||(1638457-1638584)
chr4 (472-599)||(8878893-8879020)
chr4 (480-599)||(9058952-9059071)
chr4 (480-599)||(9913276-9913395)
chr4 (479-598)||(24682328-24682447)
chr4 (492-599)||(42055427-42055534)
chr4 (465-599)||(36689680-36689814)
chr4 (480-592)||(30568006-30568118)
chr4 (264-379)||(43190298-43190413)
chr4 (474-570)||(14944758-14944854)
chr4 (483-599)||(30420033-30420149)
chr4 (464-600)||(38223512-38223648)
chr4 (474-599)||(12105995-12106119)
chr4 (474-600)||(4606828-4606954)
chr4 (464-570)||(18744099-18744205)
chr4 (492-583)||(34557213-34557304)
chr4 (472-599)||(45091284-45091398)
chr4 (472-598)||(29238433-29238559)
chr4 (474-570)||(6553816-6553912)
chr4 (480-570)||(313605-313695)
chr4 (461-527)||(37761914-37761980)
chr4 (484-599)||(3613017-3613133)
chr4 (485-599)||(23104371-23104486)
chr4 (490-600)||(25225127-25225235)
chr4 (272-342)||(2297836-2297906)
chr4 (464-592)||(39234944-39235071)
chr4 (507-570)||(45079555-45079618)
[»] scaffold0128 (1 HSPs)
scaffold0128 (472-603)||(10659-10790)
[»] scaffold0014 (1 HSPs)
scaffold0014 (472-599)||(22223-22350)
[»] scaffold0717 (1 HSPs)
scaffold0717 (464-600)||(917-1054)
[»] scaffold0576 (1 HSPs)
scaffold0576 (464-600)||(9228-9364)
[»] scaffold0603 (1 HSPs)
scaffold0603 (464-599)||(5979-6114)
[»] scaffold0009 (3 HSPs)
scaffold0009 (464-599)||(219640-219775)
scaffold0009 (492-598)||(182562-182668)
scaffold0009 (520-599)||(215663-215742)
[»] scaffold0076 (1 HSPs)
scaffold0076 (464-601)||(26487-26624)
[»] scaffold0599 (1 HSPs)
scaffold0599 (464-603)||(7509-7648)
[»] scaffold0184 (1 HSPs)
scaffold0184 (461-596)||(7457-7592)
[»] scaffold0240 (1 HSPs)
scaffold0240 (472-600)||(14989-15117)
[»] scaffold0023 (1 HSPs)
scaffold0023 (480-601)||(39701-39822)
[»] scaffold0047 (1 HSPs)
scaffold0047 (464-599)||(58586-58721)
[»] scaffold0058 (1 HSPs)
scaffold0058 (464-601)||(74539-74676)
[»] scaffold0006 (2 HSPs)
scaffold0006 (474-595)||(84678-84799)
scaffold0006 (480-599)||(120987-121106)
[»] scaffold0161 (1 HSPs)
scaffold0161 (466-602)||(6801-6937)
[»] scaffold0108 (1 HSPs)
scaffold0108 (464-600)||(12657-12792)
[»] scaffold0087 (1 HSPs)
scaffold0087 (464-599)||(37787-37922)
[»] scaffold0069 (1 HSPs)
scaffold0069 (464-599)||(10162-10297)
[»] scaffold0019 (1 HSPs)
scaffold0019 (468-599)||(173452-173584)
[»] scaffold0002 (1 HSPs)
scaffold0002 (474-600)||(439977-440103)
[»] scaffold0035 (1 HSPs)
scaffold0035 (468-596)||(74720-74849)
[»] scaffold0062 (1 HSPs)
scaffold0062 (472-600)||(43929-44057)
[»] scaffold0011 (1 HSPs)
scaffold0011 (511-599)||(17617-17705)
[»] scaffold0655 (1 HSPs)
scaffold0655 (464-600)||(3161-3295)
[»] scaffold0502 (1 HSPs)
scaffold0502 (464-589)||(10896-11021)
[»] scaffold0554 (1 HSPs)
scaffold0554 (531-600)||(9881-9950)
[»] scaffold0284 (1 HSPs)
scaffold0284 (474-570)||(1548-1644)
[»] scaffold0114 (1 HSPs)
scaffold0114 (474-570)||(36316-36412)
[»] scaffold0211 (1 HSPs)
scaffold0211 (474-570)||(19167-19263)
[»] scaffold0038 (1 HSPs)
scaffold0038 (465-598)||(34151-34284)


Alignment Details
Target: chr1 (Bit Score: 624; Significance: 0; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 624; E-Value: 0
Query Start/End: Original strand, 9 - 713
Target Start/End: Complemental strand, 46340035 - 46339331
Alignment:
Q  9 attataatacttgtaatgatgttttctttttatgaaatgatttttcttttaaaacacaaaattcgataaatatagttctttgattcataaaaataatttt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46340035 attataatacttgtaatgatgttttctttttatgaaatgatttttcttttaaaacacaaaattcgataaatatagttctttgattcataaaaataatttt 46339936  T
Q  109 tattttatcattggtttagagnnnnnnntatatcaaaactcttcaatttacgagtatacatagaagccctccaaatatttatgnnnnnnnagttacaatt 208  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  46339935 tattttatcattggtttagagaaaaaaatatatcaaaactcttcaatttacgagtatacatagaagccctccaaatatttatgtttttttagttacaatt 46339836  T
Q  209 gtatttatatttaccttaaaatgcactagctggacttgtatccatataaagaattaccaatctagtttgctactctgattctcttcactgcattaacctt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46339835 gtatttatatttaccttaaaatgcactagctggacttgtatccatataaagaattaccaatctagtttgctactctgattctcttcactgcattaacctt 46339736  T
Q  309 gttaaaggccccttcttcaaatttcatgtttatggtcttttcattcaagacatcaaggagatgattgagcaaagttattattgcacagtttatcacactc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46339735 gttaaaggccccttcttcaaatttcatgtttatggtcttttcattcaagacatcaaggagatgattgagcaaagttattattgcacagtttatcacactc 46339636  T
Q  409 ttcgagaaggaaactaatatgcagattttatcactactnnnnnnnnnnnnnctaatgagggatatttagtaagggaaaacatgaaatctctctctaattc 508  Q
    ||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46339635 ttcgagaaggaaactaatatgcagattttatcactactaaaaaaacaaaaactaatgagggatatttagtaagggaaaacatgaaatctctctctaattc 46339536  T
Q  509 cgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgtatggctaa 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46339535 cgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgtatggctaa 46339436  T
Q  609 gtttgaaacatcgtccgatagcgagattaccattccttctcctccggagggtcttttgaaccttctaagggctgatgaggctggaaccttcttttctaga 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46339435 gtttgaaacatcgtccgatagcgagattaccattccttctcctccggagggtcttttgaaccttctaagggctgatgaggctggaaccttcttttctaga 46339336  T
Q  709 gagta 713  Q
    |||||    
T  46339335 gagta 46339331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 6459221 - 6459357
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6459221 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 6459320  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||||||||||| |||||||||||||||||    
T  6459321 taatttccctcgctaatttcgctttttctagtagtgt 6459357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 9110110 - 9109975
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  9110110 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcac 9110011  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  9110010 taatttccctcgctaattttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 12720813 - 12720948
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  12720813 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccgtcac 12720912  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  12720913 taatttccctcgctaattttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 45839296 - 45839431
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45839296 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 45839395  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||| |||||||||||||||||||||||    
T  45839396 taatttccctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 6412188 - 6412052
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  6412188 tgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttac 6412089  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  6412088 taatttccctcgctaattttgctttttctagtagtgt 6412052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 744 - 915
Target Start/End: Complemental strand, 46339300 - 46339131
Alignment:
Q  744 agccttgtacaccaaaaatatatataaagtacatgtgttataatgtgataaacgatgagnnnnnnnnnnngaaaggtggtaaacgatgagatataaatca 843  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||           ||||||||||||||||||||||||||||||    
T  46339300 agccttgtacaccaaaaatatatataaagt----gtgttataatgtgataaacgatgagtttttttttttgaaaggtggtaaacgatgagatataaatca 46339205  T
Q  844 atatatgtatataattaaatttagt-aaagacaatggcacatgatggccttatag-ttggtcctcctcttagaa 915  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46339204 atatatgtatataattaaatttagtaaaagacaatggcacatgatggccttatagtttggtcctcctcttagaa 46339131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 474 - 600
Target Start/End: Original strand, 19865258 - 19865384
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||| ||||||||||||||||    
T  19865358 cgctaattttactttttctagtagtgt 19865384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 20408295 - 20408160
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  20408295 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 20408196  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||||||||||    
T  20408195 taattttcctcgctaattttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 41752437 - 41752572
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||    
T  41752437 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccgtcac 41752536  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| | || ||||||||||||||||||||||||    
T  41752537 taatttccgtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 28229580 - 28229454
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||    
T  28229480 cgctaattttgctttttctagtagtgt 28229454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 472 - 600
Target Start/End: Original strand, 4340419 - 4340547
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  4340419 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 4340518  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    || ||||||||||||||||||| ||||||    
T  4340519 cttgctaattttgctttttctaatagtgt 4340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 23457901 - 23458037
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||     
T  23457901 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaa 23458000  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23458001 taattttcctcgctaattttactttttctagtagtgt 23458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 38531305 - 38531169
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38531305 tgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcac 38531206  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    | |||| |||| |||||||| ||||||||||||||||    
T  38531205 ttatttccctccctaattttactttttctagtagtgt 38531169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 50845457 - 50845329
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |    
T  50845457 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttcc 50845358  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    ||| |||||||||||||||||||||||||    
T  50845357 ctccctaattttgctttttctagtagtgt 50845329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 12161818 - 12161953
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||     
T  12161818 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaa 12161917  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||||||||||| |||||||||||||||    
T  12161918 taattttcctcgctaattttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 472 - 602
Target Start/End: Complemental strand, 41120864 - 41120734
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |    
T  41120864 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaatttcc 41120765  T
Q  572 ctcgctaattttgctttttctagtagtgtat 602  Q
    |||||||||||||||||||||| ||||||||    
T  41120764 ctcgctaattttgctttttctattagtgtat 41120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 15243089 - 15243225
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  15243089 tgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcac 15243188  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||  |||||| ||||| ||||||||||||||||    
T  15243189 taatttctctcgctgatttttctttttctagtagtgt 15243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 22603552 - 22603687
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| ||||    
T  22603552 tgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttccatcac 22603651  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||| |||||||||||||||||||||||||    
T  22603652 taatttcccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 474 - 600
Target Start/End: Original strand, 46790014 - 46790140
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| || ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||    
T  46790114 cgctaattttgctttttctagtagtgt 46790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 472 - 601
Target Start/End: Complemental strand, 18895027 - 18894898
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| || |||| ||||||| |||| ||||||| ||||||||||||||    
T  18895027 atttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcgtcactaattttc 18894928  T
Q  572 ctcgctaattttgctttttctagtagtgta 601  Q
    |||||||||||||||||| |||||||||||    
T  18894927 ctcgctaattttgcttttcctagtagtgta 18894898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 14760871 - 14761007
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||||    
T  14760871 tgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcac 14760970  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
     ||||| ||||  ||||||||||||||||||||||||    
T  14760971 aaatttccctctttaattttgctttttctagtagtgt 14761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 22158806 - 22158941
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||    
T  22158806 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctgtcac 22158905  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||||||||||| |||||||| ||||||    
T  22158906 taatttccctcgctaattttactttttctggtagtg 22158941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 491 - 598
Target Start/End: Complemental strand, 25788105 - 25787998
Alignment:
Q  491 gaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgcttttt 590  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgcttttt 25788006  T
Q  591 ctagtagt 598  Q
    ||||||||    
T  25788005 ctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 29549422 - 29549557
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||| ||||||||  |||||||||| ||||| ||||||| ||||||    
T  29549422 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcgtcac 29549521  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  29549522 taatttccctcgctaattttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 48522522 - 48522657
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||||||||| |||| ||||||||||||||||  ||||  |||||||||||||||||||||||| ||  |||||||||| ||||| |||||||| |||||    
T  48522522 tgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcac 48522621  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||||||||||    
T  48522622 taattttcctcgctaattttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 50092417 - 50092298
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||  | | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  50092417 agggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 50092318  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||||||||||||    
T  50092317 tttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 51973425 - 51973564
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| |||| || ||||||||  |||||| ||||||||||||||||||||||||||||||| |  || ||| ||||||||||||||||||||||    
T  51973425 taatgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgt 51973524  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
     |||||||| ||||||||||||||||||||||||||||||    
T  51973525 tactaatttccctcgctaattttgctttttctagtagtgt 51973564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 52183682 - 52183817
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||| |||||||||||||     
T  52183682 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcat 52183781  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||| |||||||||||||||||||||||    
T  52183782 taatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 464 - 598
Target Start/End: Complemental strand, 9259318 - 9259184
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||| | | |||||||||| |||||  |||||||||||||    
T  9259318 tgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccgtcac 9259219  T
Q  564 taattttcctcgctaattttgctttttctagtagt 598  Q
    |||||||||||| |||||||| |||||||||||||    
T  9259218 taattttcctcgttaattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 7181690 - 7181553
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||| | | ||| ||||||||||||  |||||||||||||    
T  7181690 tgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccgtcac 7181591  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  7181590 taatttcccttgctaattttgctttttctagtagtgta 7181553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 472 - 593
Target Start/End: Complemental strand, 46786085 - 46785964
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| |    
T  46786085 atttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaatttcc 46785986  T
Q  572 ctcgctaattttgctttttcta 593  Q
    ||||||||||||||||||||||    
T  46785985 ctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 9464107 - 9464235
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  9464107 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 9464206  T
Q  564 taattttcctcgctaattttgctttttct 592  Q
    |||||| | || |||||||| ||||||||    
T  9464207 taatttccgtcactaattttactttttct 9464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 13102320 - 13102455
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  13102320 tgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccgtcac 13102419  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| ||||  ||||||||||||| |||||||||    
T  13102420 aaatttccctccttaattttgcttttcctagtagtg 13102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 464 - 595
Target Start/End: Complemental strand, 16913712 - 16913581
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  16913712 tgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccgtcac 16913613  T
Q  564 taattttcctcgctaattttgctttttctagt 595  Q
    |||||| |||  |||||||||||||| |||||    
T  16913612 taatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 8941119 - 8940994
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||  ||||||||||||||| ||||||||| |||  |||||||||||||| |||||||||||||||||||||||||| |||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  8941019 cgctaattttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 17200145 - 17200009
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||| |||| || ||||   ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  17200145 tgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcac 17200046  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    | |||| |||||||||||||| |||||||||||||||    
T  17200045 tgatttccctcgctaattttgttttttctagtagtgt 17200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 9177112 - 9177239
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||| ||||| | ||||| |||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |    
T  9177112 atttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttcc 9177211  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||| ||||||||||||||    
T  9177212 ctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 12174901 - 12174795
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||    
T  12174901 tgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttctgttac 12174802  T
Q  564 taatttt 570  Q
    |||||||    
T  12174801 taatttt 12174795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 464 - 582
Target Start/End: Complemental strand, 41071970 - 41071852
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  41071970 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccgtcac 41071871  T
Q  564 taattttcctcgctaattt 582  Q
    |||||| |||||| |||||    
T  41071870 taatttccctcgcaaattt 41071852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 464 - 592
Target Start/End: Complemental strand, 18890684 - 18890556
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || || |||||| ||||||| |||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||| ||||    
T  18890684 tgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttccatcac 18890585  T
Q  564 taattttcctcgctaattttgctttttct 592  Q
    |||||| ||||||||||||||||||||||    
T  18890584 taatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 472 - 600
Target Start/End: Original strand, 41063209 - 41063337
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||  || |||| ||||||| |||| ||||||||||||||||||||||    
T  41063209 atttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccgtcactaattttc 41063308  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    ||   ||||||| ||||||||||||||||    
T  41063309 cttcttaattttactttttctagtagtgt 41063337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 7830035 - 7830170
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||||||||| ||||| || |||||| |||     
T  7830035 tgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttccatcat 7830134  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||||||||| |||||||||    
T  7830135 aaatttccctccctaattttgcttttcctagtagtg 7830170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 9985462 - 9985327
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||| ||||| | ||||| |||||||||||||||| |||||||| |||| || ||||||||||||||||| ||||||||||||||    
T  9985462 tgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccgtcac 9985363  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||| |||||||||| ||||||||||||||    
T  9985362 taatttcccttgctaattttgttttttctagtagtg 9985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 17661054 - 17661189
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||  |||||||||||| ||||||||||||||||| | | |||||||||||||||| ||||||||||||||    
T  17661054 tgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcac 17661153  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| | ||| ||||||||||||||||| |||||    
T  17661154 taatttccgtcgttaattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 464 - 570
Target Start/End: Original strand, 32046880 - 32046986
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| || |||| ||||||||| | ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  32046880 tgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcac 32046979  T
Q  564 taatttt 570  Q
    |||||||    
T  32046980 taatttt 32046986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 499 - 600
Target Start/End: Complemental strand, 27253955 - 27253854
Alignment:
Q  499 tctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagt 598  Q
    ||||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagt 27253856  T
Q  599 gt 600  Q
    ||    
T  27253855 gt 27253854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 22789726 - 22789593
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| |||||||||| |||||||| |||||||||||||||||| | |||||||||||| ||||| || |||||||||||    
T  22789726 tgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccgtcac 22789627  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| ||||||||  ||||| ||||||||    
T  22789626 taattttcctccctaatttt--tttttttagtagtg 22789593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 12989872 - 12989991
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||| |||||||||||||| |||||  ||| ||||    
T  12989872 agggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccgtcaccaatttctctctctaa 12989971  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||||||||| ||||||||    
T  12989972 ttttgctttttttagtagtg 12989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 19081748 - 19081867
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||| |||| |||||||||||||| ||||| ||||||||| |||||||||| |||| ||||    
T  19081748 agggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctctctaa 19081847  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||| ||||||||    
T  19081848 ttttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 19129636 - 19129755
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||| |||| |||||||||||||| ||||| ||||||||| |||||||||| |||| ||||    
T  19129636 agggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctctctaa 19129735  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||| ||||||||    
T  19129736 ttttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 464 - 598
Target Start/End: Complemental strand, 17734089 - 17733954
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaatttt-gcgactaaggaatttgtgaggaatttcattttttccgtca 562  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||| ||| |||||||| ||||| ||| ||||||||||  |||| || ||||||||||    
T  17734089 tgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttccgtca 17733990  T
Q  563 ctaattttcctcgctaattttgctttttctagtagt 598  Q
    |||| ||| ||| |||||||||||||| ||||||||    
T  17733989 ctaaattttctccctaattttgcttttcctagtagt 17733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 483 - 589
Target Start/End: Complemental strand, 30928494 - 30928388
Alignment:
Q  483 gaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||| ||  |||| |||||||||||||||||||| |||| |||||||    
T  30928494 gaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtcactaatttccctctctaattt 30928395  T
Q  583 tgctttt 589  Q
    |||||||    
T  30928394 tgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 13308945 - 13308820
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||| ||||||||||||| |||||||||| | ||||||||||||||||| ||  |||||||||||||||| |||||||| | ||||||||| |||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccct 13308846  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | ||||||||| |||| |||||||||    
T  13308845 ctctaattttgtttttcctagtagtg 13308820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 483 - 600
Target Start/End: Complemental strand, 20290436 - 20290320
Alignment:
Q  483 gaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    |||||| |||||||  |||||||||||||||||||||||| || | | | ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20290436 gaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcat-ttttccgtcactaatttccctcgctaattt 20290338  T
Q  583 tgctttttctagtagtgt 600  Q
    | |||||||||| |||||    
T  20290337 tactttttctagcagtgt 20290320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 474 - 566
Target Start/End: Original strand, 41359001 - 41359094
Alignment:
Q  474 ttagtaagggaaaacatgaaa-tctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaa 566  Q
    ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 41359094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 12370076 - 12369950
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| || ||||||       ||    |||||||||||||    
T  12370076 tgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt------cat----ttttttccgtcac 12369987  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  12369986 taatttccctcgctaattttgctttttctagtagtgt 12369950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 20580929 - 20581049
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtcactaattttcctcgcta 578  Q
    ||||||||| ||||||| |||||||||| ||| | |||||||||||||||||||||||||||| ||||| | |||||||| |||||||||| |||| |||    
T  20580929 agggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttccatcactaatttccctctcta 20581028  T
Q  579 attttgctttttctagtagtg 599  Q
    ||||| |||||| ||||||||    
T  20581029 attttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 46865263 - 46865383
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||| ||| ||||||| |||||||||||| | ||||||||||||| | ||| ||||||||||| |||| |||||||||||||||||||| |||| |||     
T  46865263 agggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtcactaatttccctccctag 46865362  T
Q  580 ttttgctttttctagtagtgt 600  Q
    |||| ||||||||||||||||    
T  46865363 tttttctttttctagtagtgt 46865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 26825260 - 26825374
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||  ||||||||||||||||||||||||| |||  || |||||||||||| |  | |||||||||||||||||||||| ||  |||    
T  26825260 agggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcactaattttcttccataa 26825359  T
Q  580 ttttgctttttctag 594  Q
     ||||||||||||||    
T  26825360 ctttgctttttctag 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 492 - 600
Target Start/End: Original strand, 13195615 - 13195723
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| ||||||||||| |||||||||||||||| |  ||||||| ||||||||||| |  |||||| |||||||| | |||| |||||||||| |||||    
T  13195615 aaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatcactaatctccctccctaattttgcattttc 13195714  T
Q  592 tagtagtgt 600  Q
    |||||||||    
T  13195715 tagtagtgt 13195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 567
Target Start/End: Complemental strand, 13523080 - 13522993
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaat 567  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||  ||||||||| | ||||||    
T  13523080 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttccataactaat 13522993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 9882162 - 9882069
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||| ||||||| ||||  ||||||||||||||||||||||||||||   ||| ||||||||||| |||| |||||||||||||||||||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaatttt 9882069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 498 - 600
Target Start/End: Complemental strand, 29093655 - 29093553
Alignment:
Q  498 ctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtag 597  Q
    |||||||||||| ||| |||||||||||| ||||||| ||||||||||||| |||||||| |||  || ||| ||||  ||||||| |||||||||||||    
T  29093655 ctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttcggtccttagtttccctccttaattttactttttctagtag 29093556  T
Q  598 tgt 600  Q
    |||    
T  29093555 tgt 29093553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 475 - 599
Target Start/End: Complemental strand, 45919028 - 45918904
Alignment:
Q  475 tagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatt-ttttccgtcactaattttcct 573  Q
    |||| ||||| ||||| ||||| ||||||||||| || |||||||||||| || ||||||||| ||||| |||||||| ||||||||||| | |||||||    
T  45919028 tagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcct 45918929  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | |||||||||| ||| |||| ||||    
T  45918928 c-ctaattttgcatttcctagcagtg 45918904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 474 - 585
Target Start/End: Original strand, 49881058 - 49881168
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||| ||||||||||| ||||||||| | || ||||||||||| ||| ||||||||| |||   |||| ||||||||||||||||| ||||||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcct 49881157  T
Q  574 cgctaattttgc 585  Q
    | ||||||||||    
T  49881158 c-ctaattttgc 49881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 11917806 - 11917925
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| |||| || || ||||||||||||||||||||||||||| ||  ||||||||||  ||||  |||||| ||||||| |||| |||| ||||    
T  11917806 agggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgtttttt-cgtcactgatttccctctctaa 11917904  T
Q  580 ttttgctttttctagtagtgt 600  Q
    |||| ||||| ||| ||||||    
T  11917905 tttttcttttcctaatagtgt 11917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 12806952 - 12806836
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgag-gaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    ||||| ||||||| |||| |||||||||||||||||||| |||| ||| |||||||||| || ||   ||||||| ||||||||||| |||| ||||| |    
T  12806952 aaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatat 12806853  T
Q  583 tgctttttctagtagtg 599  Q
    ||||||| ||| |||||    
T  12806852 tgcttttcctaatagtg 12806836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 39748945 - 39749072
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| | ||||||||||||||| | ||| |||| ||||||||||||||||||  ||  || ||| |||  ||||  |||||||||||||||||||      
T  39748945 atttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaatttcg 39749044  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||  ||||||||||||| |||||||||    
T  39749045 ctccttaattttgcttttcctagtagtg 39749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 18788029 - 18787912
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||| |||  |||||||||  |||||||||||||||||| ||  |||||  |||| |||| |||||||| ||||||||||| | || ||||    
T  18788029 agggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggattttattttttc-gtcactaatttccatccctaa 18787933  T
Q  580 ttttgctttttctagtagtgt 600  Q
    |||||||||||| ||||||||    
T  18787932 ttttgctttttcaagtagtgt 18787912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 461 - 589
Target Start/End: Original strand, 6775888 - 6776015
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    ||||||| || ||||||| ||  ||||| | ||||  ||||||||||||||  |||| |||||| || || |||||||||||| |||| ||||||||| |    
T  6775888 taatgagagaaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttccat 6775987  T
Q  561 cactaattttcctcgctaattttgctttt 589  Q
    |||| |||| |||| ||||||||||||||    
T  6775988 cact-atttccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 484 - 595
Target Start/End: Complemental strand, 16258601 - 16258490
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 583  Q
    ||||| ||||| | |||| |||||||||||||||||||||| || ||||||| ||||||  |||| ||| |||||| |||||| || | ||  |||||||    
T  16258601 aaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccgccactaaattacatccttaatttt 16258502  T
Q  584 gctttttctagt 595  Q
    |||||| |||||    
T  16258501 gcttttcctagt 16258490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 526
Target Start/End: Complemental strand, 14486751 - 14486705
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcga 526  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  14486751 agggaaaacgtgaaatctctctctaattccgtcactgaattttgcga 14486705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 574
Target Start/End: Original strand, 30673506 - 30673608
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| |||||||||||  | ||||||||||  ||  ||  ||||||||| | |||| ||||  ||| ||||||||||||    
T  30673506 atttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtgaaggattttatttcctccttcactaattttc 30673605  T
Q  572 ctc 574  Q
    |||    
T  30673606 ctc 30673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 570
Target Start/End: Original strand, 52621166 - 52621264
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||||| ||| ||||||||||||   || |||||||| ||||||||||||  ||||||  ||||| ||||  |||| ||||||||| |||||||||||    
T  52621166 atttagtgaggaaaaacatgaaattcttcactaattccatcactaaattttatgactaaataatttatgagagattttattttttccatcactaatttt 52621264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 556
Target Start/End: Complemental strand, 28560378 - 28560305
Alignment:
Q  483 gaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttt 556  Q
    ||||| ||||||||||| |||||||| |||||||||||| | ||| ||  |||| | ||| |||||||||||||    
T  28560378 gaaaatatgaaatctctttctaattctgtcactaaatttagtgacaaataaattagagagaaatttcatttttt 28560305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 3e-63; HSPs: 80)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 464 - 603
Target Start/End: Complemental strand, 24661144 - 24661005
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24661144 tgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 24661045  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtatg 603  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  24661044 taatttccctcgctaattttgctttttctagtagtgtatg 24661005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 11049886 - 11049750
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11049886 tgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 11049787  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||| |||||||||| |||||||||||||||    
T  11049786 taatttcccttgctaattttgttttttctagtagtgt 11049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 6598468 - 6598603
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  6598468 tgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccgtcac 6598567  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  6598568 taatttccctcgctaattttgctttttctagtagtg 6598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 9892967 - 9893102
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9892967 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 9893066  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  9893067 taatttccctcgctaattttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 465 - 599
Target Start/End: Original strand, 26224433 - 26224567
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 564  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  26224433 gagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcact 26224532  T
Q  565 aattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||| |||||||||||||||||||||||||||||    
T  26224533 aatttccctcgctaattttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 6605621 - 6605496
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  6605521 cgctaattttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 464 - 601
Target Start/End: Original strand, 28364915 - 28365052
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  28364915 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 28365014  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| |||||||||||||||||||||||||||||||    
T  28365015 taatttccctcgctaattttgctttttctagtagtgta 28365052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 495762 - 495627
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  495762 tgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 495663  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||| |||||||||||||||||||||||||    
T  495662 taatttcccttgctaattttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 2992619 - 2992754
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  2992619 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccatcac 2992718  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||||||||| ||||||| |||||||||    
T  2992719 taatttccctcgctaattatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 15364593 - 15364457
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15364593 tgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 15364494  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||| |||||||||||||||||||||||||    
T  15364493 taatttccctcactaattttgctttttctagtagtgt 15364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 596
Target Start/End: Original strand, 25398006 - 25398138
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25398006 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 25398105  T
Q  564 taattttcctcgctaattttgctttttctagta 596  Q
    |||||| ||||||||||||| ||||||||||||    
T  25398106 taatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 12200698 - 12200833
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  12200698 tgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcac 12200797  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||| ||||||||||||||||||| ||||    
T  12200798 taatttccctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 15448397 - 15448524
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  15448397 atttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaatttcc 15448496  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  15448497 ctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 33250843 - 33250705
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||| |||||||||| ||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33250843 tgagagatatttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 33250744  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||| ||||| ||||||||  ||||||||||||||||    
T  33250743 taatttccctcgttaattttgtcttttctagtagtgtat 33250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 1939377 - 1939241
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||| ||| || |||||||||||||| |||||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||| |||||    
T  1939377 tgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcggtcac 1939278  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  1939277 taatttccctcgctaattttgctttttctagtagtgt 1939241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 22579484 - 22579348
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  22579484 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcac 22579385  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  22579384 taatttccctcgctaattttgctttttctaatagtgt 22579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 602
Target Start/End: Original strand, 6978283 - 6978419
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||  ||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  6978283 tgagggatatttagtgag--aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaac 6978380  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||| ||||||||||||||||||| ||| ||||||||    
T  6978381 taatttccctcgctaattttgcttttcctaatagtgtat 6978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 464 - 598
Target Start/End: Complemental strand, 27796969 - 27796835
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||| |||| ||| ||||||||| ||||||    
T  27796969 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcgtcac 27796870  T
Q  564 taattttcctcgctaattttgctttttctagtagt 598  Q
    |||||| ||||||||||||||||||||||||||||    
T  27796869 taatttccctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 22083842 - 22083978
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||||||||||    
T  22083842 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 22083941  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
     ||||| |||| |||||||||||||| ||||||||||    
T  22083942 aaatttccctccctaattttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 26939591 - 26939726
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||    
T  26939591 tgagagatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcac 26939690  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||  ||||||| |||||||||||||||    
T  26939691 taatttccctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 5360429 - 5360547
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |||||||||||||||||||| |||||||||    
T  5360429 agggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaa 5360528  T
Q  580 ttttgctttttctagtagt 598  Q
    |||||||||||||||||||    
T  5360529 ttttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 472 - 601
Target Start/End: Original strand, 18492381 - 18492510
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    |||| |||||||||||| ||||||| | |||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||| |    
T  18492381 attttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccgtcactaatttgc 18492480  T
Q  572 ctcgctaattttgctttttctagtagtgta 601  Q
     |||||||||||||||||||||| ||||||    
T  18492481 atcgctaattttgctttttctagcagtgta 18492510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 596
Target Start/End: Original strand, 21140943 - 21141075
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | |||||| ||||||||||||||||||||||||    
T  21140943 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccgtcac 21141042  T
Q  564 taattttcctcgctaattttgctttttctagta 596  Q
    |||||| ||||| ||||||||||||||||||||    
T  21141043 taatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 2669313 - 2669448
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||||||  || ||||| | ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  2669313 tgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcac 2669412  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||| |||||||||||||||||||||||    
T  2669413 taatttccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 474 - 593
Target Start/End: Complemental strand, 5192314 - 5192195
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  574 cgctaattttgctttttcta 593  Q
    ||||||||||||||||||||    
T  5192214 cgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 12351721 - 12351586
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12351721 tgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccgtcac 12351622  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||  ||||| | |||||||||||||||    
T  12351621 taatttccctccttaattatactttttctagtagtg 12351586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 12951712 - 12951847
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||| || |||||||||||    
T  12951712 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccgtcac 12951811  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||||||||| |||||||||    
T  12951812 aaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 16250921 - 16250802
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||  | | ||||||||||||||||||||||||||||||||||||| ||||| |||    
T  16250921 agggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgttaa 16250822  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||||||||||||||||||    
T  16250821 ttttgctttttctagtagtg 16250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 20182165 - 20182284
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  20182165 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 20182264  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||||||||||||    
T  20182265 ttttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 22153826 - 22153707
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  22153826 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 22153727  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||||||||||||    
T  22153726 ttttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 21990301 - 21990174
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||| |||||| |    
T  21990301 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttttccgtcattaatttcc 21990203  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||||    
T  21990202 ctcgctaattttgctttttctagtagtgt 21990174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 18033660 - 18033526
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | | ||||||||||    
T  18033660 tgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt-aatgtttccgtcac 18033562  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||||||||| |||||||||    
T  18033561 aaatttccctccctaattttgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 474 - 596
Target Start/End: Original strand, 11077663 - 11077785
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 11077762  T
Q  574 cgctaattttgctttttctagta 596  Q
    | |||||||| ||||||||||||    
T  11077763 ccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 12160981 - 12160845
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||| ||||||||| ||||||||||| ||||| |||||||||| |||||||||||||| |||  ||  |||||||||||||||||||||||| ||||||    
T  12160981 tgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcac 12160883  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  12160882 taatttccctcgctaattttactttttctagtagtgta 12160845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 474 - 602
Target Start/End: Complemental strand, 15961532 - 15961404
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||  |||||||||||||| ||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||| |||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  574 cgctaattttgctttttctagtagtgtat 602  Q
    || ||||||||||||||||||||||||||    
T  15961432 cgttaattttgctttttctagtagtgtat 15961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 14886573 - 14886700
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| |||| || |||| ||||||| |||| |||||||| |||||||||||||    
T  14886573 atttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctgtcactaattttc 14886672  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||| ||||||||||||||||| ||||||    
T  14886673 ctccctaattttgctttttctggtagtg 14886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 18048792 - 18048927
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||| ||||||||||||| ||| |||||||  ||||||||||||||||| || ||||||||||| ||||| ||||||||||||||    
T  18048792 tgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccgtcac 18048891  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| ||||||||| |||| |||||||||    
T  18048892 taattttcctctctaattttgtttttcctagtagtg 18048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 30834087 - 30833960
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||| ||| | ||||| ||||||||||| |||| ||||||||||||| ||  |||| |||||||||||||||||||||||||||||||| |    
T  30834087 atttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaatttcc 30833988  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  30833987 ctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 490 - 599
Target Start/End: Original strand, 15509186 - 15509295
Alignment:
Q  490 tgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttt 589  Q
    ||||||| ||||||||||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  15509186 tgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctttt 15509285  T
Q  590 tctagtagtg 599  Q
    ||| ||||||    
T  15509286 tctggtagtg 15509295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 12499230 - 12499356
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||| |||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  574 cgctaattttg-ctttttctagtagtg 599  Q
    |||||||||||  ||||||||||||||    
T  12499330 cgctaattttgtttttttctagtagtg 12499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 12506559 - 12506685
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||| |||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  574 cgctaattttg-ctttttctagtagtg 599  Q
    |||||||||||  ||||||||||||||    
T  12506659 cgctaattttgtttttttctagtagtg 12506685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 12509671 - 12509545
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||| |||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  574 cgctaattttg-ctttttctagtagtg 599  Q
    |||||||||||  ||||||||||||||    
T  12509571 cgctaattttgtttttttctagtagtg 12509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 474 - 596
Target Start/End: Original strand, 14872133 - 14872255
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||  || |||||||||||||||||||| || ||||||||||| ||||| |||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 14872232  T
Q  574 cgctaattttgctttttctagta 596  Q
    | |||||||| ||||| ||||||    
T  14872233 ctctaatttttcttttcctagta 14872255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 464 - 570
Target Start/End: Original strand, 27705426 - 27705532
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||    
T  27705426 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtaac 27705525  T
Q  564 taatttt 570  Q
    |||||||    
T  27705526 taatttt 27705532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 492 - 602
Target Start/End: Original strand, 28668132 - 28668242
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| || ||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||    
T  28668132 aaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccctcgctaattttactttttc 28668231  T
Q  592 tagtagtgtat 602  Q
    |||||||||||    
T  28668232 tagtagtgtat 28668242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 480 - 581
Target Start/End: Original strand, 12845023 - 12845124
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| |||| ||||    
T  12845023 agggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccgtcactaatttccctccctaa 12845122  T
Q  580 tt 581  Q
    ||    
T  12845123 tt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 472 - 603
Target Start/End: Original strand, 11530237 - 11530368
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||| |||| ||||| || ||||||||||| ||||| |    
T  11530237 atttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccgtcacaaatttcc 11530336  T
Q  572 ctcgctaattttgctttttctagtagtgtatg 603  Q
    ||| |||||||||||||| ||| |||||||||    
T  11530337 ctccctaattttgcttttcctaatagtgtatg 11530368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 492 - 599
Target Start/End: Original strand, 17919568 - 17919675
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| | ||||  ||||||||||||| ||||||    
T  17919568 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgctaattttgttttttc 17919667  T
Q  592 tagtagtg 599  Q
    ||||||||    
T  17919668 tagtagtg 17919675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 492 - 598
Target Start/End: Original strand, 10458796 - 10458902
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    |||| ||||| ||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||    
T  10458796 aaatttctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaattttactttttc 10458895  T
Q  592 tagtagt 598  Q
    |||||||    
T  10458896 tagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 14772690 - 14772800
Alignment:
Q  489 atgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgcttt 588  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||| |||||| |||||  ||| |||||||||||||    
T  14772690 atgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgcttt 14772789  T
Q  589 ttctagtagtg 599  Q
    ||||| |||||    
T  14772790 ttctaatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 10929616 - 10929495
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtga-ggaatttcattttttccgtcactaattttcctcgcta 578  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||| || |||| |||||||||||||||||||||| || |||    
T  10929616 agggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttcccta 10929517  T
Q  579 attttgctttttctagtagtgt 600  Q
    |||||| |||| | ||||||||    
T  10929516 attttgattttccaagtagtgt 10929495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 474 - 558
Target Start/End: Original strand, 13145016 - 13145100
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttcc 558  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 9885255 - 9885382
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| |||| |||||  ||||||||||||||| || ||  ||||||||||  |||| |||||||||||||||||||| |    
T  9885255 atttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaatttcc 9885354  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||| || |||||||||||||||||||||    
T  9885355 ctccctgattttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 485 - 592
Target Start/End: Original strand, 9060115 - 9060222
Alignment:
Q  485 aaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttg 584  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||  ||||||||||| |||| ||||||||||||||||||||  |||  ||||||||    
T  9060115 aaacatgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaatttcgctctttaattttg 9060214  T
Q  585 ctttttct 592  Q
    ||||||||    
T  9060215 ctttttct 9060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 465 - 583
Target Start/End: Original strand, 23281791 - 23281908
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 564  Q
    |||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| |   |||||||||||||||| ||||||||| |||||    
T  23281791 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccatcact 23281890  T
Q  565 aattttcctcgctaatttt 583  Q
    ||||| |||| ||||||||    
T  23281891 aatttccctc-ctaatttt 23281908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 516 - 600
Target Start/End: Original strand, 5250195 - 5250279
Alignment:
Q  516 aaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  5250195 aaattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtgt 5250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 21691611 - 21691495
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt-cctcgctaattt 582  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||| || ||||||||||| ||||| ||||||| | ||||||||||| |||| |||||||    
T  21691611 aaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttcatcactaattttccctctctaattt 21691512  T
Q  583 tgctttttctagtagtg 599  Q
    | |||||| ||||||||    
T  21691511 tactttttttagtagtg 21691495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 474 - 601
Target Start/End: Original strand, 6065451 - 6065578
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||||| |||||  ||||||||||  |||| ||||||||||||  || |||||||||||  |||| ||||||||||||| ||||||||||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  574 cgctaattttgctttttctagtagtgta 601  Q
    | |||||||||||||| ||| |||||||    
T  6065551 ccctaattttgcttttcctaatagtgta 6065578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 474 - 593
Target Start/End: Complemental strand, 20692936 - 20692817
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||| ||||||||||||||||||| ||  || || | | |||||| ||||||||||||||||||||||||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  574 cgctaattttgctttttcta 593  Q
    || |||||||| ||||||||    
T  20692836 cgttaattttgttttttcta 20692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 343698 - 343592
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||| | ||||||||| | ||||| ||||||||||| ||||||||| |||||||| ||  |||||||||||||||||||||||| ||||||    
T  343698 tgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacgtcac 343599  T
Q  564 taatttt 570  Q
    |||||||    
T  343598 taatttt 343592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 464 - 589
Target Start/End: Complemental strand, 22055747 - 22055622
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||||||  |||||| ||| ||||||||||||| |||||||||||| ||| | ||||||| ||| || ||||||||||||||||| |||||||| ||||     
T  22055747 tgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcat 22055648  T
Q  564 taattttcctcgctaattttgctttt 589  Q
    |||||| |||| ||||||||| ||||    
T  22055647 taatttccctctctaattttgttttt 22055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 474 - 596
Target Start/End: Original strand, 11350196 - 11350315
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||   || |||  | ||||||||||| ||||| |||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgt---gatttttttgttttccgtcacaaatttccct 11350292  T
Q  574 cgctaattttgctttttctagta 596  Q
    | |||||||||||||| ||||||    
T  11350293 ccctaattttgcttttcctagta 11350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 33547560 - 33547656
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||||||||||||||| || |||||||  |||||||||||||||||| || |||||||||||| |||| |||||||||||| ||||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtccctaatttt 33547656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 484 - 595
Target Start/End: Complemental strand, 12157491 - 12157380
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 583  Q
    |||| ||||||||  ||||||||||||||||||||||||  ||| || || ||||| ||| |||| |||||||||||||||||||| ||||  |||||||    
T  12157491 aaaatatgaaatcattctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcactaatttccctccttaatttt 12157392  T
Q  584 gctttttctagt 595  Q
    ||||||||||||    
T  12157391 gctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 482 - 595
Target Start/End: Original strand, 1954903 - 1955015
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 581  Q
    ||||||||||||||| |||| ||||||| |||| |||||||| ||| ||| ||||||||| |||||| ||||||||||||||| |||| |||  ||||||    
T  1954903 ggaaaacatgaaatc-ctctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttcccttcctaatt 1955001  T
Q  582 ttgctttttctagt 595  Q
    |||||||| |||||    
T  1955002 ttgcttttcctagt 1955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 480 - 593
Target Start/End: Complemental strand, 12205304 - 12205191
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||| ||| | | ||||||||||| ||||| || |||||||||||||||||  ||  ||||    
T  12205304 agggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttcctaa 12205205  T
Q  580 ttttgctttttcta 593  Q
    |||| |||||||||    
T  12205204 ttttactttttcta 12205191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 603
Target Start/End: Original strand, 16118166 - 16118289
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||   |||||||||| ||  |||| | |||||||||||||||||| | || ||||    
T  16118166 agggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcactaatttccgtccctaa 16118265  T
Q  580 ttttgctttttctagtagtgtatg 603  Q
    |||| | ||| ||| |||||||||    
T  16118266 ttttacctttcctaatagtgtatg 16118289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 14036624 - 14036751
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||| |||| ||||||||||||  | |||||||||||||||        |||| |||||    
T  14036624 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaa--------tttctgtcac 14036715  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||||||||||| |||||| ||||||||    
T  14036716 taatttccctcgctaattttcctttttttagtagtg 14036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 12680303 - 12680184
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||  |||||||||||||||| |||||||| |||  || ||||| ||||| ||||| ||||||||||||||||| |||||||  |||    
T  12680303 agggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtcactaa-tttcctccttaa 12680205  T
Q  580 ttttgctttttctagtagtgta 601  Q
    |||| |||||| ||||||||||    
T  12680204 tttttcttttt-tagtagtgta 12680184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 498 - 553
Target Start/End: Complemental strand, 19175878 - 19175823
Alignment:
Q  498 ctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattt 553  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  19175878 ctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 19175823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 11431775 - 11431638
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttt--ccgtc 561  Q
    ||||||| ||||||  ||| |||||  || ||| |||| |||||||||||||||||||||| | ||| |||||||||||  |||| |||||||  |||||    
T  11431775 tgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgcaa-taaagaatttgtgagagattttattttttttccgtc 11431677  T
Q  562 actaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||| ||| |||||||| |||||  |||||||||    
T  11431676 actaatttttctccctaattttacttttcttagtagtgt 11431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 499 - 555
Target Start/End: Complemental strand, 3673233 - 3673177
Alignment:
Q  499 tctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttt 555  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||    
T  3673233 tctctaattccgtcactaaattttacgaccaaaaaatttgtgaggaatttcattttt 3673177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 581
Target Start/End: Original strand, 2396227 - 2396325
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttc-attttttccgtcactaattttcctcgctaatt 581  Q
    ||||| |||||| |||||||  |||||||| |||||||| | || || |||||| ||||||||||  |||||||||||||||||||||| || ||||||    
T  2396227 aaaacgtgaaatttctctctgtttccgtcattaaattttacaaccaaagaatttatgaggaatttttattttttccgtcactaattttcttctctaatt 2396325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 573
Target Start/End: Original strand, 5270412 - 5270506
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcga-ctaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||||||  ||||||  ||||||||||||||||||||||||| ||| | ||  |||||||||| ||||| ||||||||| |||| |||||||||    
T  5270412 agggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttccatcacaaattttcct 5270506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 601
Target Start/End: Complemental strand, 8844252 - 8844166
Alignment:
Q  516 aaattttgcgactaaggaatttgt-gaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||||||||| ||  ||||||| |||  |||| |||||||||||||||||||| |||| || ||||| |||||||||||||||||    
T  8844252 aaattttgcgaccaataaatttgttgagagattttattttttccgtcactaatttccctccctgatttttctttttctagtagtgta 8844166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 539 - 599
Target Start/End: Complemental strand, 13251439 - 13251379
Alignment:
Q  539 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||| ||||| ||||||||||||  ||| |||||||||||||||||| |||||    
T  13251439 tgaggaatttcacttttttcgtcactaatttctctctctaattttgctttttctattagtg 13251379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 484 - 602
Target Start/End: Complemental strand, 7000998 - 7000879
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatt-ttttccgtcactaattttcctcgctaattt 582  Q
    ||||||||||||  |||  ||||| | |||||||||| || ||||| | ||||||||||| |||||||| |||||  ||||| |||| |||| |||||||    
T  7000998 aaaacatgaaatacctcaataatttcttcactaaattctgtgactatgaaatttgtgagggatttcatttttttctatcactgatttccctcactaattt 7000899  T
Q  583 tgctttttctagtagtgtat 602  Q
    ||||||| ||  ||||||||    
T  7000898 tgcttttactgatagtgtat 7000879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 602
Target Start/End: Original strand, 33191180 - 33191222
Alignment:
Q  560 tcactaattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||||||| ||||||||||||||||||||||| ||||||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtgtat 33191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 598
Target Start/End: Original strand, 28233990 - 28234123
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 564  Q
    |||||| |||||  ||||||| | ||||||| ||||||||| |   |||||||| ||| |||| ||  |||||||||| ||||| ||||||||| ||| |    
T  28233990 gagggaaatttacaaagggaacatatgaaatttctctctaactttctcactaaagtttacgaccaataaatttgtgagaaattttattttttccctcatt 28234089  T
Q  565 aattttcctcgctaattttgctttttctagtagt 598  Q
    |||||  |||  | ||||||||||| ||| ||||    
T  28234090 aatttcgctccttgattttgcttttcctaatagt 28234123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 30745836 - 30745718
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||||||||  || |||||||||||||||| |||  ||  ||||||| |   |||| ||||||||  ||||||||| | ||| ||||    
T  30745836 agggaaaacgtgaaatctctct--aagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttattttttctatcactaattcttctccctaa 30745739  T
Q  580 ttttgctttttctagtagtgt 600  Q
     ||||||||| | ||||||||    
T  30745738 ctttgcttttccaagtagtgt 30745718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 121; Significance: 2e-61; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 464 - 604
Target Start/End: Original strand, 19607 - 19747
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19607 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19706  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtatgg 604  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  19707 taatttcccttgctaattttgctttttctagtagtgtatgg 19747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 6e-61; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 24576159 - 24576024
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24576159 tgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 24576060  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  24576059 taatttccctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 17810300 - 17810435
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17810300 tgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcac 17810399  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||||||||||    
T  17810400 taattttcctcgctaattttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 27910899 - 27910764
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27910899 tgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcac 27910800  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  27910799 taatttccctcgctaattttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 27957318 - 27957183
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27957318 tgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcac 27957219  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  27957218 taatttccctcgctaattttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 464 - 601
Target Start/End: Original strand, 27869240 - 27869377
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  27869240 tgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcac 27869339  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| |||||||||||||||||||||||||||||||    
T  27869340 taatttccctcgctaattttgctttttctagtagtgta 27869377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 8555439 - 8555304
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  8555439 tgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 8555340  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  8555339 taatttccctcgctaattttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 22939315 - 22939450
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22939315 tgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcac 22939414  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| | || ||||||||||||||||||||||||    
T  22939415 taatttccttcactaattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 33652569 - 33652705
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33652569 tgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 33652668  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||||||||||||||||||||| |||||||    
T  33652669 taatttccctcgctaattttgctttttctggtagtgt 33652705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 13061056 - 13060930
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||| ||||||||||    
T  13060956 cgctaattttgcttttgctagtagtgt 13060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 18010195 - 18010058
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18010195 tgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcac 18010096  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    ||||||  ||||||||||||||||||||| ||||||||    
T  18010095 taatttctctcgctaattttgctttttctggtagtgta 18010058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 24193315 - 24193196
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  24193315 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 24193216  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||||||||||||||||||    
T  24193215 ttttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 19488186 - 19488060
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||    
T  19488086 cgctaattttgctttttctagtagtgt 19488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 464 - 601
Target Start/End: Original strand, 19240869 - 19241006
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| | ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19240869 tgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19240968  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| |||||||||||||||||||||||||||||||    
T  19240969 taatttccctcgctaattttgctttttctagtagtgta 19241006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 464 - 601
Target Start/End: Original strand, 19314053 - 19314190
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| | ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19314053 tgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19314152  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| |||||||||||||||||||||||||||||||    
T  19314153 taatttccctcgctaattttgctttttctagtagtgta 19314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 4330980 - 4331115
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  4330980 tgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 4331079  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  4331080 taatttccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 3823135 - 3823271
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  3823135 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccgtcac 3823234  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  3823235 taatttccctcgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 29350925 - 29351061
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttc-cgtca 562  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||  ||||    
T  29350925 tgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctagtca 29351024  T
Q  563 ctaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||| |||||||||||||||||||||||||||||    
T  29351025 ctaatttccctcgctaattttgctttttctagtagtg 29351061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 6817056 - 6817191
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||  | |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  6817056 tgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcac 6817155  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    | |||||||| |||||||||||||||||||||||||    
T  6817156 tgattttccttgctaattttgctttttctagtagtg 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 11938755 - 11938881
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |    
T  11938755 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-tttttccgtcactaatttcc 11938853  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  11938854 ctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 17824751 - 17824616
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||||    
T  17824751 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcac 17824652  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| ||||||||||||||||||||||||    
T  17824651 aaatttccctctctaattttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 472 - 603
Target Start/End: Original strand, 19256222 - 19256353
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |    
T  19256222 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaatttcc 19256321  T
Q  572 ctcgctaattttgctttttctagtagtgtatg 603  Q
    |||| |||||||||||||||||||||||||||    
T  19256322 ctcgttaattttgctttttctagtagtgtatg 19256353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 464 - 602
Target Start/End: Original strand, 21350480 - 21350618
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||| ||||| | |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21350480 tgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 21350579  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||| ||| ||| ||||||||||||||||||||||||    
T  21350580 taatttcccttgcttattttgctttttctagtagtgtat 21350618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 32247921 - 32248046
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||| |||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    || |||||||||||||||||||||||    
T  32248021 cgttaattttgctttttctagtagtg 32248046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 4647874 - 4647754
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  4647874 agggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 4647775  T
Q  580 ttttgctttttctagtagtgt 600  Q
    ||||| |||||||||||||||    
T  4647774 ttttgttttttctagtagtgt 4647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 43431694 - 43431559
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  43431694 tgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcac 43431595  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||| |||||||| |||||||||||||||    
T  43431594 taatttccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 17104000 - 17103862
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||||    
T  17104000 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcac 17103901  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
     |||||  ||| ||||||||| |||||||||||||||||    
T  17103900 aaatttctctctctaattttgttttttctagtagtgtat 17103862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 474 - 603
Target Start/End: Complemental strand, 23752411 - 23752282
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  | ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  574 cgctaattttgctttttctagtagtgtatg 603  Q
    |||||||||||||||||||| |||||||||    
T  23752311 cgctaattttgctttttctaatagtgtatg 23752282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 472 - 597
Target Start/End: Original strand, 37992109 - 37992234
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | |||| || |||||||||||||||||||    
T  37992109 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccgtcactaattttc 37992208  T
Q  572 ctcgctaattttgctttttctagtag 597  Q
    ||| |||||||||||||| |||||||    
T  37992209 ctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 40289555 - 40289419
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| ||| |||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||    
T  40289555 tgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccgtcac 40289457  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  40289456 taattttcctcgctaattttaatttttctagtagtgta 40289419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 30467081 - 30466953
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||| | |||||||||||||||||| |    
T  30467081 atttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaatttcc 30466982  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||||    
T  30466981 ctcgctaattttgctttttctagtagtgt 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 492 - 600
Target Start/End: Original strand, 30687966 - 30688074
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  30687966 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgatttccctcgctaattttgctttttc 30688065  T
Q  592 tagtagtgt 600  Q
    |||||||||    
T  30688066 tagtagtgt 30688074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 6816518 - 6816383
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||||| ||||| ||||||| | ||||    
T  6816518 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttcatcac 6816419  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||||||||| ||||||| |||||||||    
T  6816418 taatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 492 - 599
Target Start/End: Original strand, 8824855 - 8824962
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  8824855 aaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccctcgctaattttgctttttc 8824954  T
Q  592 tagtagtg 599  Q
    ||||||||    
T  8824955 tagtagtg 8824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 25000558 - 25000431
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | | ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25000558 atttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttcc 25000459  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||| |||||||| |||||||||||||||    
T  25000458 ctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 25655977 - 25655858
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| |||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  25655977 agggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcactaa 25655878  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||||||||||||||||||    
T  25655877 ttttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 464 - 597
Target Start/End: Complemental strand, 9915175 - 9915043
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  9915175 tgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac-atggaatttgtgaggaatttcattttttccgtcac 9915077  T
Q  564 taattttcctcgctaattttgctttttctagtag 597  Q
    ||||||  ||||||||||||||||||||||||||    
T  9915076 taatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 472 - 600
Target Start/End: Original strand, 24636662 - 24636791
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| |    
T  24636662 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatttcc 24636761  T
Q  572 ctcgctaattttgct-ttttctagtagtgt 600  Q
    |||| |||||||||| ||||||||||||||    
T  24636762 ctcgttaattttgctattttctagtagtgt 24636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 465 - 600
Target Start/End: Original strand, 9631406 - 9631542
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattcc-gtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||||| |||| || | ||||||| |||||| ||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||    
T  9631406 gagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcac 9631505  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||| ||||||||||||||||||||||||||    
T  9631506 taattttccttgctaattttgctttttctagtagtgt 9631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 5670296 - 5670169
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |    
T  5670296 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaatttcc 5670197  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||| | |||||| ||||||||| ||||    
T  5670196 ctcgttgattttgttttttctagcagtg 5670169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 16062054 - 16061939
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 583  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16062054 aaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 16061955  T
Q  584 gctttttctagtagtg 599  Q
     |||||||||||||||    
T  16061954 actttttctagtagtg 16061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 31399633 - 31399508
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| |||||||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||||| |||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    || |||||||| ||||||||||||||    
T  31399533 cgttaattttgttttttctagtagtg 31399508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 32961661 - 32961797
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||  | ||||  ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||    
T  32961661 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctgtcac 32961760  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    | |||| |||||||||||||||||||| |||||||||    
T  32961761 tgatttccctcgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 513 - 600
Target Start/End: Complemental strand, 42700743 - 42700656
Alignment:
Q  513 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  42700743 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttttctagtagtgt 42700656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 25273452 - 25273328
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| ||||||||||| |||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||| |||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcatttttt-cgtcactaatttccct 25273354  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    || |||||||||||||||||||||||    
T  25273353 cgttaattttgctttttctagtagtg 25273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 29345073 - 29345208
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| ||||||| ||| ||||||||||||||||||||||| |||||| |||||||||   |||| ||||||||||||||    
T  29345073 tgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcac 29345172  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||| |||||||| |||||||||||||||    
T  29345173 taatttccctccctaatttttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 498 - 599
Target Start/End: Original strand, 8789876 - 8789977
Alignment:
Q  498 ctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtag 597  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| |||||||||| |||||||||||||| |||||||    
T  8789876 ctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctagtag 8789975  T
Q  598 tg 599  Q
    ||    
T  8789976 tg 8789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 474 - 602
Target Start/End: Original strand, 10917839 - 10917967
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||| |||||||| |||| ||||||||||||||||||||||||||| |  ||| ||||| |||||||||| || ||||||||||| ||||| |||    
T  10917839 ttagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccct 10917938  T
Q  574 cgctaattttgctttttctagtagtgtat 602  Q
    | |||||||||||||||||||||||||||    
T  10917939 ccctaattttgctttttctagtagtgtat 10917967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 474 - 601
Target Start/End: Complemental strand, 33413095 - 33412975
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||| |||||||| |||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg------gaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  574 cgctaattttgctttttctagtagtgta 601  Q
    |||||||||| |||||||||||||||||    
T  33413001 cgctaatttt-ctttttctagtagtgta 33412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 519 - 599
Target Start/End: Original strand, 25274654 - 25274734
Alignment:
Q  519 ttttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 25274734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 474 - 566
Target Start/End: Complemental strand, 19493781 - 19493688
Alignment:
Q  474 ttagtaagggaaaacatgaaa-tctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaa 566  Q
    ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 19493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 490 - 599
Target Start/End: Complemental strand, 21219349 - 21219240
Alignment:
Q  490 tgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttt 589  Q
    ||||||| |||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||||||||||||||||||||||  |||||| ||||| |||||    
T  21219349 tgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgatttttctttt 21219250  T
Q  590 tctagtagtg 599  Q
    ||||||||||    
T  21219249 tctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 26399132 - 26399007
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||  |||| |||||||||||||||||||| |||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccct 26399033  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | ||| |||   ||||| ||||||||    
T  26399032 ccctattttacttttttttagtagtg 26399007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 492 - 600
Target Start/End: Complemental strand, 6084351 - 6084245
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||| |||  |||| ||||||||||||||||||||  ||| ||||||||||||||||    
T  6084351 aaatctctctctaattccgtcactaaatttttagaccaaggaatttgggag--attttattttttccgtcactaatttatctccctaattttgctttttc 6084254  T
Q  592 tagtagtgt 600  Q
    || ||||||    
T  6084253 tattagtgt 6084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 480 - 601
Target Start/End: Original strand, 15251620 - 15251740
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| |||||||  |||||||||| |||||||||||||||||| ||  |||  |||||  |||| |||||||||||||||||||| |||| ||||    
T  15251620 agggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaaaaatc-gtgagagattttattttttccgtcactaatttccctccctaa 15251718  T
Q  580 ttttgctttttctagtagtgta 601  Q
    |||||||||||| |||||||||    
T  15251719 ttttgctttttcaagtagtgta 15251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 18844679 - 18844542
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| | ||||||||||||||| ||||||||||  || | ||||||||||||| ||  |||||||||||||||| || |||||| ||||    
T  18844679 tgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttccatcac 18844580  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
     ||||  | || |||||||||||||| |||||||||||    
T  18844579 aaattaccatccctaattttgcttttcctagtagtgta 18844542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 480 - 601
Target Start/End: Original strand, 17003280 - 17003401
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| | ||||  ||||||||| | |||| ||||||||| ||  ||||||||| |||||  ||| |||||||||  |||||||||||||| ||||    
T  17003280 agggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattttcctccctaa 17003379  T
Q  580 ttttgctttttctagtagtgta 601  Q
    ||||||||||||||||||||||    
T  17003380 ttttgctttttctagtagtgta 17003401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 464 - 560
Target Start/End: Original strand, 5879206 - 5879302
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    ||||||| ||||||| ||| ||||| | ||||  ||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||    
T  5879206 tgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccgt 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 41527825 - 41527729
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||| ||||||||||||||| ||||||  || ||||||||||||||  ||||||||| ||||| |||| |||||||||||||||||||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaatttt 41527729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 474 - 592
Target Start/End: Original strand, 14304241 - 14304359
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||||  |||||| |||| || ||| | |||||||||||  ||| | | |||||| |||| |||||||||||||| |||||||||| |||    
T  14304241 ttagtgagggaaaacgcgaaatccctctttatttctggcactaaattttatgacgaggaaatttgcgagggatttcattttttccatcactaatttccct 14304340  T
Q  574 cgctaattttgctttttct 592  Q
    |||||||||||||||||||    
T  14304341 cgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 31344291 - 31344172
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||  ||||||  |||||||||||||||| ||||||||||||  ||| ||||| |||| ||||| ||||||||| |||||||||| | || ||||    
T  31344291 agggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttccatcactaatttccttctctaa 31344192  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||  ||||||||    
T  31344191 ttttacttttcttagtagtg 31344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 504 - 593
Target Start/End: Complemental strand, 35678154 - 35678065
Alignment:
Q  504 aattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttcta 593  Q
    |||| |||||| ||||||| ||| |||||||||||||| | |||| ||||||||| ||| |||||||||||  |||||||||||||||||    
T  35678154 aatttcgtcaccaaattttacgaataaggaatttgtgatggattttattttttccttcattaattttcctccttaattttgctttttcta 35678065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 15289662 - 15289750
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    |||||||||||||||| ||||  ||||||| |||||||||||| |||| || |||||||||||  |||| ||||| |||||| ||||||||    
T  15289662 agggaaaacatgaaatatctc--taattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaatttt 15289750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 15470031 - 15470119
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    |||||||||||||||| ||||  ||||||| |||||||||||| |||| || |||||||||||  |||| ||||| |||||| ||||||||    
T  15470031 agggaaaacatgaaatatctc--taattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaatttt 15470119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 595
Target Start/End: Complemental strand, 2265474 - 2265383
Alignment:
Q  503 taattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagt 595  Q
    |||||| |||||||||||||| ||  || |||||||||| | |||| ||||||||||||||||| |||| || |||||||| ||||| |||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaa-tttcgtccctaattttacttttcctagt 2265383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 556
Target Start/End: Complemental strand, 3692271 - 3692214
Alignment:
Q  499 tctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttt 556  Q
    ||||||||||| | ||||||||||  |||||| ||||||||||||||||| |||||||    
T  3692271 tctctaattccattactaaattttatgactaaagaatttgtgaggaattttatttttt 3692214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 602
Target Start/End: Complemental strand, 24479877 - 24479810
Alignment:
Q  535 tttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgtat 602  Q
    ||||||||  |||| | |||||| ||||||||||| |||| |||||| |||||||| |||||||||||    
T  24479877 tttgtgagagattttactttttctgtcactaatttccctctctaattatgctttttttagtagtgtat 24479810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 594
Target Start/End: Complemental strand, 6103802 - 6103760
Alignment:
Q  552 tttttccgtcactaattttcctcgctaattttgctttttctag 594  Q
    |||||| |||| ||||||||||| |||||||||||||||||||    
T  6103802 tttttctgtcattaattttcctctctaattttgctttttctag 6103760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 600
Target Start/End: Original strand, 25651122 - 25651165
Alignment:
Q  555 ttccgtcactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||    
T  25651122 ttccgtcactaattttcctcgctaatttt--tttttctggtagtgt 25651165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 29473435 - 29473329
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| || ||| |||||||||| |||||||  ||||| ||||||| ||||||||||| ||| | | |||| | ||||  ||| ||||||||||  ||    
T  29473435 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgttactaaattttgtgacgaggaaattagagaggggttttattttttccgctac 29473336  T
Q  564 taatttt 570  Q
    |||||||    
T  29473335 taatttt 29473329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 6e-61; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 27806022 - 27806157
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  27806022 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcac 27806121  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||||||||||    
T  27806122 taattttcctcgctaattttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 15014540 - 15014403
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15014540 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcac 15014441  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
     ||||| ||||||||||||| |||||||||||||||||    
T  15014440 caatttccctcgctaattttactttttctagtagtgta 15014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 28800882 - 28801017
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  28800882 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctgtcac 28800981  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  28800982 taatttccctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 7733447 - 7733312
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7733447 tgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 7733348  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||| ||||||||||||||||    
T  7733347 taatttccctcgctaatttcgctttttctagtagtg 7733312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 22486398 - 22486533
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| | ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22486398 tgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 22486497  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  22486498 taatttccctcgctaattttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 23232043 - 23232178
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  23232043 tgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 23232142  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||| ||||||||||||||||||||||||    
T  23232143 taatttccctctctaattttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 47523785 - 47523650
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  47523785 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 47523686  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||  ||||||||||||||    
T  47523685 taatttccctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 465 - 599
Target Start/End: Complemental strand, 6849345 - 6849211
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 564  Q
    |||||| ||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6849345 gagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcact 6849246  T
Q  565 aattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||| |||||||||||||||||||||||||||||    
T  6849245 aatttccctcgctaattttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 42926555 - 42926418
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatt-ttttccgtca 562  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  42926555 tgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttccgtca 42926456  T
Q  563 ctaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||  |||||||||||||||    
T  42926455 ctaattttcctcgctaattttattttttctagtagtgt 42926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 21917469 - 21917334
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21917469 tgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 21917370  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||| ||||||||||||||||||||||||    
T  21917369 taatttccctcactaattttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 3872312 - 3872187
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  3872212 cgctaattttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 1842898 - 1843034
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 1842997  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  1842998 taatttccctcgttaattttgctttttctagtagtgt 1843034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 18217833 - 18217968
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||| ||||| | ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18217833 tgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 18217932  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  18217933 taatttccctcgctaattttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 24605850 - 24605977
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |    
T  24605850 atttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 24605949  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||| |||||||||||||||    
T  24605950 ctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 11036511 - 11036647
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  11036511 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 11036610  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  11036611 taatttcccttgctaattttgctttttctagtagtgt 11036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 23539252 - 23539371
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    |||||| || ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23539252 agggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 23539351  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||||||||||||||||||    
T  23539352 ttttgctttttctagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 23577324 - 23577189
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23577324 tgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 23577225  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||  |||||| ||||| |||||||||||||||    
T  23577224 taatttctctcgctgatttttctttttctagtagtg 23577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 31425646 - 31425511
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  31425646 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccgtcac 31425547  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||||||||||||||||||||| |||||    
T  31425546 taatttccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 3904603 - 3904477
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||| |||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||    
T  3904503 cgctaattttgctttttctagtagtgt 3904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 20174024 - 20174160
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  20174024 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 20174123  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||| || |||||||    
T  20174124 taatttccctcgctaattttgcttttcctggtagtgt 20174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 603
Target Start/End: Original strand, 20429469 - 20429608
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||||||    
T  20429469 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccgtcac 20429568  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtatg 603  Q
    |||||| ||| | |||||||||||||||||||||||||||    
T  20429569 taatttcccttgttaattttgctttttctagtagtgtatg 20429608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 23750871 - 23750736
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||  | ||||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  23750871 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccgtcac 23750772  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||| ||||||||||||||    
T  23750771 taatttccctcgctaattttgttttttctagtagtg 23750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 37135420 - 37135283
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||||||||||    
T  37135420 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccgtcac 37135321  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| |||| ||||||||| ||||||||||||||||    
T  37135320 taatttccctcactaattttgttttttctagtagtgta 37135283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 9698673 - 9698537
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||  |||||||||||||||||||||||||  ||| ||||||||||||| |||||||||| ||||||||||    
T  9698673 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcac 9698574  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9698573 taatttccctcgctaattttgctttttctagtagtgt 9698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 39979759 - 39979623
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||||||    
T  39979759 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 39979660  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
     ||||| |||| |||||||||||||| ||| ||||||    
T  39979659 aaatttccctccctaattttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 604
Target Start/End: Complemental strand, 40847570 - 40847430
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||| |||||| || |||||||||||    
T  40847570 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcac 40847471  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtatgg 604  Q
     ||||| |||| |||||||| ||||| ||||||||||||||    
T  40847470 aaatttccctccctaattttacttttcctagtagtgtatgg 40847430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 484 - 600
Target Start/End: Original strand, 48933160 - 48933276
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 583  Q
    ||||| ||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48933160 aaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattttcctcgctaatttt 48933259  T
Q  584 gctttttctagtagtgt 600  Q
    |||||||||| ||||||    
T  48933260 gctttttctaatagtgt 48933276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 21623033 - 21623159
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |    
T  21623033 atttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 21623132  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||    
T  21623133 ctcgct-attttgctttttctagtagtg 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 33427691 - 33427829
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||| ||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||  ||    
T  33427691 taataagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcatttttt-ggt 33427789  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  33427790 cactaatttccctcgctaattttgttttttctagtagtgt 33427829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 38057633 - 38057772
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| ||||||  ||||||||| ||||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| |    
T  38057633 taatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccat 38057732  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||||||||| | |||||||||||| |||||||||    
T  38057733 cactaattttcctcgttgattttgctttttgtagtagtgt 38057772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 475 - 599
Target Start/End: Original strand, 1907370 - 1907494
Alignment:
Q  475 tagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctc 574  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||||||| || |||| ||||||| |||| |||||||||||||||||||| ||||    
T  1907370 tagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaatttccctc 1907469  T
Q  575 gctaattttgctttttctagtagtg 599  Q
    ||||||||||||||| |||||||||    
T  1907470 gctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 2650947 - 2650826
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| || |||| ||||    
T  2650947 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaa 2650848  T
Q  580 ttttgctttttctagtagtgta 601  Q
    |||| |||||||||||||||||    
T  2650847 tttttctttttctagtagtgta 2650826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 464 - 573
Target Start/End: Complemental strand, 10050971 - 10050862
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  10050971 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcac 10050872  T
Q  564 taattttcct 573  Q
    ||||||||||    
T  10050871 taattttcct 10050862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 21871607 - 21871707
Alignment:
Q  499 tctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagt 598  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  21871607 tctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgccactgattttcctcgctaattttgttttttctagtagt 21871706  T
Q  599 g 599  Q
    |    
T  21871707 g 21871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 23699944 - 23699825
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||  ||||||| |||| |||||| |||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  23699944 agggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 23699845  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||||||||||||    
T  23699844 tttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 36993832 - 36993959
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| || |||||| |||| ||||| |    
T  36993832 atttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaatttcc 36993931  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||| |||||||||||||| |||||||||    
T  36993932 ctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 1824325 - 1824199
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||| ||||| |||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 1824226  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    | |||||||||||||| ||||||||||    
T  1824225 ccctaattttgcttttcctagtagtgt 1824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 472 - 582
Target Start/End: Original strand, 36636518 - 36636628
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |    
T  36636518 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttcc 36636617  T
Q  572 ctcgctaattt 582  Q
    ||| |||||||    
T  36636618 ctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 469 - 599
Target Start/End: Original strand, 15969793 - 15969924
Alignment:
Q  469 gatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtcactaat 567  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||| |||| || ||||||||||| ||||||| |||||||||||||||||    
T  15969793 gatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaat 15969892  T
Q  568 tttcctcgctaattttgctttttctagtagtg 599  Q
     | ||||  ||||||| |||||||||||||||    
T  15969893 atccctcattaattttactttttctagtagtg 15969924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 474 - 601
Target Start/End: Original strand, 26577279 - 26577406
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||| | ||| |||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttccct 26577378  T
Q  574 cgctaattttgctttttctagtagtgta 601  Q
      |||||||||||||| | |||||||||    
T  26577379 tcctaattttgcttttcccagtagtgta 26577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 474 - 600
Target Start/End: Original strand, 4514779 - 4514905
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||| |||||||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||| || ||||||||||| ||||| |||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccct 4514878  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    | |||||||||||||| ||||||||||    
T  4514879 ccctaattttgcttttcctagtagtgt 4514905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 267 - 439
Target Start/End: Original strand, 21440775 - 21440946
Alignment:
Q  267 aatctagtttgctactctgattctcttcactgcattaaccttgttaaaggccc--cttcttcaaatttcatgtttatggtcttttcattcaagacatcaa 364  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| |  |||||||||||| ||||||||| || |||| |||||||| |||||    
T  21440775 aatctagtttgctactctgattctattcactgcattaacctcgttaaaggctctccttcttcaaattccatgtttatagtgttttgattcaagatatcaa 21440874  T
Q  365 ggagatgattgagcaaagttattattgcacagtttatcacactcttcgagaaggaaactaatatgcagattttat 439  Q
    |||| ||||||| || ||||||     ||||||||| |||||||||||||| |||||  ||| |||| |||||||    
T  21440875 ggagctgattgatcagagttatgt---cacagtttaccacactcttcgagatggaaatcaatgtgcaaattttat 21440946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 503 - 601
Target Start/End: Complemental strand, 14786731 - 14786633
Alignment:
Q  503 taattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgta 601  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||    
T  14786731 taattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattttcctcactaattttgttttttctaatagtgta 14786633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 464 - 598
Target Start/End: Original strand, 24140454 - 24140588
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||| |||||  |||| |||||||||| |||||||| |||| || ||||||||||||||||| || |||||||||||    
T  24140454 tgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccgtcac 24140553  T
Q  564 taattttcctcgctaattttgctttttctagtagt 598  Q
     |||||||||| |||||||| ||||| ||||||||    
T  24140554 aaattttcctccctaattttacttttcctagtagt 24140588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 464 - 570
Target Start/End: Original strand, 45664772 - 45664878
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| || |||| ||||||||| | ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  45664772 tgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctgtcac 45664871  T
Q  564 taatttt 570  Q
    |||||||    
T  45664872 taatttt 45664878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 2093487 - 2093362
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||| |||  ||    ||| ||||||||||||||||||||||||||||||| |||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    |||| ||||| |||||||||||||||    
T  2093387 cgctgatttttctttttctagtagtg 2093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 31042271 - 31042374
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||| | ||||||||||||| ||||    
T  31042271 agggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttccataactaattttcctctctaa 31042370  T
Q  580 tttt 583  Q
    ||||    
T  31042371 tttt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 816308 - 816191
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 581  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||  ||||  ||||||||||||||||||| |||| |||| |    
T  816308 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccgtcactaatttccctccctaaat 816209  T
Q  582 ttgctttttctagtagtg 599  Q
    ||| |||||| |||||||    
T  816208 ttgttttttccagtagtg 816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 480 - 595
Target Start/End: Original strand, 2457690 - 2457803
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||  |||| || ||||| ||||||||||| |||| ||||    
T  2457690 agggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag--attttatattttctgtcactaatttccctccctaa 2457787  T
Q  580 ttttgctttttctagt 595  Q
    |||||||||| |||||    
T  2457788 ttttgcttttcctagt 2457803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 461 - 557
Target Start/End: Complemental strand, 15330343 - 15330247
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttc 557  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||| ||| |||||||||| ||||||| ||||||    
T  15330343 taatgagggatatttagtaaggaaaaacttgaaatttctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaatttcaatttttc 15330247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 20924085 - 20923958
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||| ||  ||||||| ||  |||| ||||||||| |||||||||| |    
T  20924085 atttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaatttcc 20923986  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||  ||||||| |||||||||||||||    
T  20923985 ctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 464 - 591
Target Start/End: Original strand, 22501598 - 22501725
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| ||||||| |||||||||||||||| ||||||||||| | || ||||||||||   |||| ||||||||||||||    
T  22501598 tgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccgtcac 22501697  T
Q  564 taattttcctcgctaattttgctttttc 591  Q
    |||||||| ||  ||||||||| |||||    
T  22501698 taattttcatccttaattttgccttttc 22501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 485 - 595
Target Start/End: Original strand, 27304895 - 27305005
Alignment:
Q  485 aaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttg 584  Q
    |||| ||| ||| |||||||||||||||||||||||||||| | |||||||||||| || |||| |||||||| ||||||||||| |||| |||||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttg 27304994  T
Q  585 ctttttctagt 595  Q
     |||| |||||    
T  27304995 tttttcctagt 27305005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 464 - 597
Target Start/End: Original strand, 32267351 - 32267483
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  |||||||||   ||||| ||||||||||| |||||||||||||||||  ||| ||||||||||| |||| | ||||||||||||    
T  32267351 tgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggatttta-tttttccgtcac 32267449  T
Q  564 taattttcctcgctaattttgctttttctagtag 597  Q
    |||| | |||| |||||||||| |||||||||||    
T  32267450 taatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 27130335 - 27130472
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| ||||||  ||||||||  ||||||| ||||  |||||||||||||| |||||||| ||| |||||||||||| |||| || |||||| |    
T  27130335 taatgagggaaatttagagagggaaaatgtgaaatccctct--aattccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttccat 27130432  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||| ||||  ||| | |||||||||||||||||||||||    
T  27130433 cactgatttctctctcgaattttgctttttctagtagtgt 27130472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 1822118 - 1821996
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||| |||||||||||||||||||||||||| ||| ||||||||  ||   ||||||||||||||||||| || ||||||||||||||||   ||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ct 1822022  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | ||||||||||||||  ||||||||    
T  1822021 ccctaattttgcttttcatagtagtg 1821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 480 - 590
Target Start/End: Original strand, 11852028 - 11852138
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| |||||||  ||||||||||||||||||||||||| ||| || |||||||||||  |||| |||||||| ||||| |||||  ||| ||||    
T  11852028 agggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctctccctaa 11852127  T
Q  580 ttttgcttttt 590  Q
    |||||||||||    
T  11852128 ttttgcttttt 11852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 461 - 599
Target Start/End: Complemental strand, 25777250 - 25777112
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| ||||||  ||||||||| ||||||| |||||||||| | |||||||||||| |||  ||  ||||||||||| |||| ||||| |  ||    
T  25777250 taatgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggt 25777151  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| || |||||||| | |||||||||||||    
T  25777150 cactaattttcttccctaattttaccttttctagtagtg 25777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 491 - 598
Target Start/End: Complemental strand, 27132829 - 27132722
Alignment:
Q  491 gaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgcttttt 590  Q
    ||||| |||||||||||| ||||||||||||||| || ||  ||||||||| | |||| ||||||||||| || ||||| |||| |||||||| ||||||    
T  27132829 gaaatatctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgttaccaatttccctctctaattttacttttt 27132730  T
Q  591 ctagtagt 598  Q
    ||||||||    
T  27132729 ctagtagt 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 11890274 - 11890176
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||||| |||||||| |||| ||| ||| |||| | ||||||||||||||| ||| || |||||| ||||| |||| |||||||||||||||||||||    
T  11890274 atttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccgtcactaatttt 11890176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 483 - 599
Target Start/End: Complemental strand, 10222745 - 10222630
Alignment:
Q  483 gaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    |||||| | ||||| ||||||||||| |||| ||||||||||||  ||  ||||| |||| ||||| | |||||| |||||||||||||||| ||||||     
T  10222745 gaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaa-aatttatgagaaattttactttttctgtcactaattttcctccctaatta 10222647  T
Q  583 tgctttttctagtagtg 599  Q
    || ||||||||||||||    
T  10222646 tgttttttctagtagtg 10222630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 599
Target Start/End: Original strand, 687947 - 688005
Alignment:
Q  541 aggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||| ||||||| ||||| | |||| |||||||||||||||||||||||||||||    
T  687947 aggaattttatttttttcgtcattgatttccctcgctaattttgctttttctagtagtg 688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 492 - 590
Target Start/End: Original strand, 26415456 - 26415554
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgcttttt 590  Q
    ||||| |||| ||||| |||||||||||||| |||  ||  |||||||||| ||||| ||||||||| |||||||||| | || |||||||| ||||||    
T  26415456 aaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttccatcactaatttccttctctaattttacttttt 26415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 38090336 - 38090402
Alignment:
Q  533 aatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| |||| |||||||||||||| ||||| |||| ||||||||||| || |||||||||    
T  38090336 aatttgtgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 702
Target Start/End: Original strand, 21440944 - 21441049
Alignment:
Q  600 tatggctaagtttgaaacatcgtccgatagcgagattaccattc---cttctcctccggagggtcttttgaaccttctaagggctgatgaggctggaacc 696  Q
    ||||||||| |||| | | |||||||| ||| | ||||||||||   ||||||| ||| | ||||||||||||||| ||||||| ||||||| ||||| |    
T  21440944 tatggctaaatttggagcttcgtccgacagcaaaattaccattcatccttctcccccgaaaggtcttttgaaccttgtaagggcagatgaggttggaatc 21441043  T
Q  697 ttcttt 702  Q
    ||||||    
T  21441044 ttcttt 21441049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 492 - 598
Target Start/End: Complemental strand, 1841889 - 1841784
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| |||||||||||| ||| |||||||||| |  ||||||||||||||| |||| ||||||| | | ||||||||  ||  ||||||||||||||      
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttatttttt-cttaactaatttctcttcctaattttgcttttca 1841791  T
Q  592 tagtagt 598  Q
    |||||||    
T  1841790 tagtagt 1841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 589
Target Start/End: Original strand, 8116516 - 8116599
Alignment:
Q  506 ttccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttt 589  Q
    |||| ||||||||||||| ||| |   | |||||||||||||| |||||||  |||||||||||||| | |||||||| |||||    
T  8116516 ttccatcactaaattttgtgacgagaaagtttgtgaggaattttattttttttgtcactaattttccgctctaatttttctttt 8116599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 30908992 - 30908945
Alignment:
Q  552 tttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  30908992 ttttttcgtcactaatttttctctctaattttgcttttcctagtagtg 30908945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 4e-59; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 618298 - 618434
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  618298 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 618397  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  618398 taatttccctcgctaattttgctttttctaatagtgt 618434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 16121974 - 16121838
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  16121974 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccgtcac 16121875  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  16121874 taatttccctcgctaattttgctttttctagtagtgt 16121838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 461 - 599
Target Start/End: Complemental strand, 2472852 - 2472714
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  2472852 taatgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgt 2472753  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||| | || ||||||||||||||||||||||||    
T  2472752 cactaatttccttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 17039766 - 17039628
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| || |||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17039766 tgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 17039667  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17039666 taattttcctcactaattttgctttttctagtagtgtat 17039628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 461 - 600
Target Start/End: Complemental strand, 35620481 - 35620343
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  35620481 taatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt-attttttccgt 35620383  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  35620382 cactaatttccctcgctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 746993 - 746867
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    ||||||||||||||||||| |||||||    
T  746893 cgctaattttgctttttcttgtagtgt 746867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 12328361 - 12328225
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||    
T  12328361 tgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgttac 12328262  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||| |||||||||||||||||||||||||    
T  12328261 taatttccctcactaattttgctttttctagtagtgt 12328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 8886986 - 8886851
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||  | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  8886986 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcac 8886887  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     |||||||||||||||||||||||||||||||||||    
T  8886886 aaattttcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 603
Target Start/End: Original strand, 20959512 - 20959651
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||     
T  20959512 tgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccgtcag 20959611  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtatg 603  Q
    | ||||||||| |||||||| |||||||||||||||||||    
T  20959612 tgattttcctccctaattttactttttctagtagtgtatg 20959651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 461 - 600
Target Start/End: Complemental strand, 28265613 - 28265474
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| |||| || |||||| || | ||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  28265613 taatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgt 28265514  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  28265513 cactaattttcctcgctaattttactttttctagtagtgt 28265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 33818696 - 33818558
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  33818696 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 33818597  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
     ||||| |||| | |||||||||||||||||||||||||    
T  33818596 aaatttccctccccaattttgctttttctagtagtgtat 33818558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 472 - 601
Target Start/End: Complemental strand, 24138968 - 24138839
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |||||||    
T  24138968 atttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattttc 24138869  T
Q  572 ctcgctaattttgctttttctagtagtgta 601  Q
    |||||||||||||||||||||| |||||||    
T  24138868 ctcgctaattttgctttttctaatagtgta 24138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 38837796 - 38837671
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  38837696 cgctaattttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 12045731 - 12045866
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | |||||  |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  12045731 tgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccgtcac 12045830  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  12045831 taatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 36196398 - 36196533
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||  ||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  36196398 tgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccgtcac 36196497  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  36196498 taatttccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 474 - 600
Target Start/End: Original strand, 10494751 - 10494877
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||  ||||||||||||||||||||    
T  10494851 cgctacatttgctttttctagtagtgt 10494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 464 - 602
Target Start/End: Original strand, 17986733 - 17986871
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  17986733 tgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccgtcac 17986832  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    ||||||  ||| |||||||| |||||||||| |||||||    
T  17986833 taatttctctcactaattttactttttctagcagtgtat 17986871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 4125313 - 4125188
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    |||||||||| |||||||||||||||    
T  4125213 cgctaattttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 474 - 598
Target Start/End: Complemental strand, 17772093 - 17771969
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||| |||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  574 cgctaattttgctttttctagtagt 598  Q
    |||| ||||| ||||||||||||||    
T  17771993 cgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 23408984 - 23409120
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtca 562  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||    
T  23408984 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttccgtca 23409083  T
Q  563 ctaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||| ||||||||||||||||||||||||||||    
T  23409084 ctaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 7888809 - 7888936
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| |    
T  7888809 atttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaataatttcc 7888908  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  7888909 ctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 8108979 - 8108860
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  8108979 agggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctctctaa 8108880  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||||||||||||||||||    
T  8108879 ttttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 25652718 - 25652583
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||  | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  25652718 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtcac 25652619  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    | |||| ||||||||||||||||||||||| |||||    
T  25652618 tgatttccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 26708712 - 26708585
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |    
T  26708712 atttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatttcc 26708613  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||||| |||||||||||||    
T  26708612 ctcgctaattttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 26978446 - 26978319
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |    
T  26978446 atttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatttcc 26978347  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||||| |||||||||||||    
T  26978346 ctcgctaattttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 464 - 590
Target Start/End: Original strand, 23975639 - 23975765
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  23975639 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 23975738  T
Q  564 taattttcctcgctaattttgcttttt 590  Q
    |||||| ||||||||||||||||||||    
T  23975739 taatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 16631991 - 16631874
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 581  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16631991 ggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 16631892  T
Q  582 ttgctttttctagtagtg 599  Q
    || |||||||||||||||    
T  16631891 tttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 461 - 599
Target Start/End: Original strand, 5982646 - 5982785
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccg 559  Q
    |||||||| | ||||||| ||||||||| | ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||||||    
T  5982646 taatgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccg 5982745  T
Q  560 tcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  5982746 tcactaatttccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 15060977 - 15061112
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||| ||||| ||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||    
T  15060977 tgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcggtcac 15061076  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||| ||||||    
T  15061077 taatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 7003863 - 7003727
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||||||||  |||||||||||||||||||||||  | ||||||||||||||||||  |||||||||||||    
T  7003863 tgagggaaattttgtgagggaaaacgtgaaatctctct--aattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccgtcac 7003766  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  7003765 taatttccctcgctaattttgttttttctagtagtgtat 7003727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 25397913 - 25397787
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||| |||||| || ||||||||||| ||||| |||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 25397814  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    | |||||||||||||| ||||||||||    
T  25397813 ccctaattttgcttttcctagtagtgt 25397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 474 - 600
Target Start/End: Original strand, 40484058 - 40484184
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||| | || ||||||||| |||||||||||||||| |||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||| ||||||||||||||||    
T  40484158 cgctaatttttctttttctagtagtgt 40484184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 23423883 - 23423755
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||| || |||| |||||| ||||| |    
T  23423883 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttcc 23423784  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    ||| |||||||||||| | ||||||||||    
T  23423783 ctccctaattttgcttatcctagtagtgt 23423755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 36832025 - 36831890
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||  | ||||| |||||||||||| ||||||||||||| ||| ||||||||| |||||||||||||||||| |||| |    
T  36832025 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcgtccc 36831926  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||| ||||||||||||||||||||||||    
T  36831925 taatttccctcactaattttgctttttctagtagtg 36831890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 13974213 - 13974078
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||| |||||||||||||||||  |||| | | ||||||||| |||||||||||||| |||| |    
T  13974213 tgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcgtcgc 13974114  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  13974113 taatttccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 13620254 - 13620126
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||  ||||||||||  |||| |||||||||||||||||||| |    
T  13620254 atttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaatttcc 13620155  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    ||| || ||||| ||||||||||||||||    
T  13620154 ctccctgatttttctttttctagtagtgt 13620126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 25673363 - 25673228
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| |  |||||||||||||| |||||||||||||||||| ||||||||||| || |||||||| |||| ||| ||||||||||||||    
T  25673363 tgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttattttttccgtcac 25673265  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||||| ||||||||  |||| ||||||||||    
T  25673264 taattttcctccctaatttttattttcctagtagtgt 25673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 36716319 - 36716200
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| |||||||  ||||||||||| ||| |||||||| |||| |  ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  36716319 agggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattttttccatcactaatttccctcgctaa 36716220  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||| ||||||||||||||    
T  36716219 ttttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 484 - 598
Target Start/End: Complemental strand, 33735088 - 33734974
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 583  Q
    ||||||||||| | |||| ||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||||| ||| ||||||||||| ||||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaatttt 33734989  T
Q  584 gctttttctagtagt 598  Q
    |||||| ||||||||    
T  33734988 gcttttcctagtagt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 11927903 - 11927786
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 581  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||||||| || |||||||  ||| ||||||    
T  11927903 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttccatctctaatttatctccctaatt 11927804  T
Q  582 ttgctttttctagtagtg 599  Q
    |||||||||||| |||||    
T  11927803 ttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 492 - 601
Target Start/End: Complemental strand, 17036519 - 17036410
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| |  ||| |||||||||| |||||    
T  17036519 aaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctcgctccctaattttgcattttc 17036420  T
Q  592 tagtagtgta 601  Q
    ||||||||||    
T  17036419 tagtagtgta 17036410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 36597465 - 36597340
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||| ||||  ||||||||||| ||||||||||||| |||| |||||||||||||||||||| || ||||||||||  |||||| ||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttct 36597366  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | | ||||||||||||||||||||||    
T  36597365 cccaaattttgctttttctagtagtg 36597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 20188068 - 20187941
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| || |||||| |  |||| ||||||||||| |||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||| |    
T  20188068 atttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactaatttcc 20187969  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
     ||||||||||||||||| ||| |||||    
T  20187968 ttcgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 464 - 570
Target Start/End: Original strand, 17079409 - 17079515
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||| ||| |||| |||||||||||| |    
T  17079409 tgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccgtccc 17079508  T
Q  564 taatttt 570  Q
    |||||||    
T  17079509 taatttt 17079515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 10420371 - 10420250
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||||| ||  || |||||||| |||| |||||||||||||||||||| |||| ||||    
T  10420371 agggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtcactaatttccctctctaa 10420272  T
Q  580 ttttgctttttctagtagtgta 601  Q
    ||||| ||| | ||||||||||    
T  10420271 ttttgatttctttagtagtgta 10420250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 471 - 600
Target Start/End: Complemental strand, 23974704 - 23974575
Alignment:
Q  471 tatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    |||||||| ||||||| |||  |||| |||||||||| ||||| |||||||| |||| ||||||||||||||  |||| |||||||||||||||||||||    
T  23974704 tatttagtgagggaaagcattcaatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaatttt 23974605  T
Q  571 cctcgctaattttgctttttctagtagtgt 600  Q
    |||  |||||||| ||||| ||||||||||    
T  23974604 ccttcctaatttttcttttcctagtagtgt 23974575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 33816893 - 33816788
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||    
T  33816893 tgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 33816794  T
Q  564 taattt 569  Q
     |||||    
T  33816793 aaattt 33816788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 27428131 - 27428012
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||| | || ||||| ||||||| |||||||||||| |||| ||||    
T  27428131 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcgtcactaatttccctccctaa 27428032  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||  ||||||||    
T  27428031 tttttcttttattagtagtg 27428012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 474 - 596
Target Start/End: Original strand, 35778155 - 35778277
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| || ||| |||| || | ||||||||||||| || |||||||||||  |||| ||||||||| |||||||||| |||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  574 cgctaattttgctttttctagta 596  Q
    | | |||||| ||||||||||||    
T  35778255 cccaaattttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 472 - 589
Target Start/End: Complemental strand, 3080823 - 3080706
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||||| |||| | ||||||| ||||| |||||| |||||||||||  |||| ||||||||| |||| ||||| |    
T  3080823 atttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttccatcacgaatttcc 3080724  T
Q  572 ctcgctaattttgctttt 589  Q
    ||  ||||||||||||||    
T  3080723 ctacctaattttgctttt 3080706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 480 - 589
Target Start/End: Complemental strand, 32726845 - 32726736
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||| | |  ||| || |||||| ||||||||||  ||| ||||    
T  32726845 agggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaatttcgctccctaa 32726746  T
Q  580 ttttgctttt 589  Q
    ||||||||||    
T  32726745 ttttgctttt 32726736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 9024227 - 9024324
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaa-ttccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||| |||||||||||||||||||| ||  || ||||||||||||||| |||||||||  |||| |||| |||||||||||||||||||||    
T  9024227 ttagtgagggataacatgaaatctctctctaaattatgttactaaattttgcgaccaaggaatttacgagggattttattttttccgtcactaatttt 9024324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 484 - 556
Target Start/End: Complemental strand, 31853203 - 31853131
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttt 556  Q
    |||||||||||||||||||||||||||||||||||||||||||| |   ||||| ||||| |||| |||||||    
T  31853203 aaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 493 - 598
Target Start/End: Complemental strand, 16472287 - 16472182
Alignment:
Q  493 aatctctctctaattccgtcactaaa-ttttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    |||| ||||||||||| ||||||||| ||||||||| || |||||| ||| | |||| ||||||| || ||||||||| |||| | ||||||||||||||    
T  16472287 aatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgacactaattt-cctcccaaattttgctttttc 16472189  T
Q  592 tagtagt 598  Q
    |||||||    
T  16472188 tagtagt 16472182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 464 - 601
Target Start/End: Original strand, 18413560 - 18413696
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| |||| || || | ||||||||||  |||||||| |||||||| || |||||||  |||| |||||||  |||||    
T  18413560 tgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgactaagaaacttgtgagtgattttattttttaagtcac 18413659  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    ||||||| ||| ||||| ||  ||||| ||||||||||    
T  18413660 taatttttctctctaatctt-atttttttagtagtgta 18413696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 599
Target Start/End: Complemental strand, 29727939 - 29727895
Alignment:
Q  555 ttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 500 - 571
Target Start/End: Complemental strand, 5043610 - 5043539
Alignment:
Q  500 ctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||||||| |||||||||||  ||| |   |||||||||| |||||||||||||| |||||||||||||    
T  5043610 ctctaattccgccactaaattttatgacgataaaatttgtgagaaatttcattttttctgtcactaattttc 5043539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 480 - 571
Target Start/End: Original strand, 26301923 - 26302014
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||||| ||||||  |||||||||||| |||||||||||| |   |||||||||||| |||  ||| |||| ||||||||||| |||||    
T  26301923 agggaaaacgtgaaattgctctctaattccatcactaaattttacagttaaggaatttgtaaggggttttatttcttccgtcactatttttc 26302014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 601
Target Start/End: Complemental strand, 19891025 - 19890984
Alignment:
Q  560 tcactaattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtgta 19890984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 16464723 - 16464768
Alignment:
Q  554 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||||||| |||| |||||||||| ||| |||||||||    
T  16464723 tttccgtcactaatttccctccctaattttgcctttcctagtagtg 16464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 522
Target Start/End: Complemental strand, 22649467 - 22649406
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaatttt 522  Q
    ||||||| || ||||||  ||||||||| |||||||  ||||||||||||||| ||||||||    
T  22649467 taatgagagaaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 2e-58; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 18551388 - 18551253
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18551388 tgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcac 18551289  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||| ||||||||    
T  18551288 taattttcctcgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 14757256 - 14757118
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||     
T  14757256 tgagtgatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcat 14757157  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  14757156 taattttcttcgctaattttgctttttctagtagtgtat 14757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 28841477 - 28841341
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  28841477 tgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgttac 28841378  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  28841377 taatttccctcgctaattttgcttttcctagtagtgt 28841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 44722932 - 44723068
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  44722932 tgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcat 44723031  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  44723032 taatttccctcgctaattttgctttttctagtagtgt 44723068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 32008952 - 32009089
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtca 562  Q
    ||||||| ||||| | ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  32008952 tgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtca 32009051  T
Q  563 ctaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32009052 ctaattttcctcgctaattttgctttttctagtagtgt 32009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 465 - 598
Target Start/End: Complemental strand, 28319713 - 28319580
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 564  Q
    |||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  565 aattttcctcgctaattttgctttttctagtagt 598  Q
    ||||| |||| |||||||||||||||||||||||    
T  28319613 aatttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 44476492 - 44476375
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 581  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  44476492 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaatt 44476393  T
Q  582 ttgctttttctagtagtg 599  Q
    ||||||||||||||||||    
T  44476392 ttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 32300451 - 32300579
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  32300451 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 32300550  T
Q  564 taattttcctcgctaattttgctttttct 592  Q
    |||||| ||||||||||||||||||||||    
T  32300551 taatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 474 - 602
Target Start/End: Complemental strand, 43408636 - 43408508
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  574 cgctaattttgctttttctagtagtgtat 602  Q
    | |||||||||||||||||||||||||||    
T  43408536 cactaattttgctttttctagtagtgtat 43408508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 21293846 - 21293711
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||||||    
T  21293846 tgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccgtcac 21293747  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||| ||||||||||||||    
T  21293746 taatttccctcgctaattttgttttttctagtagtg 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 41637626 - 41637753
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |    
T  41637626 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttcc 41637725  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||| ||||||||||||||||||||||||    
T  41637726 ctccctaattttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 472 - 601
Target Start/End: Complemental strand, 13788182 - 13788053
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||  | ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |    
T  13788182 atttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactgatttcc 13788083  T
Q  572 ctcgctaattttgctttttctagtagtgta 601  Q
    ||||||||||||||||||||||||||||||    
T  13788082 ctcgctaattttgctttttctagtagtgta 13788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 483 - 599
Target Start/End: Complemental strand, 22140480 - 22140364
Alignment:
Q  483 gaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  22140480 gaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgttaattt 22140381  T
Q  583 tgctttttctagtagtg 599  Q
    |||||||||||||||||    
T  22140380 tgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 12779608 - 12779735
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||  |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |    
T  12779608 atttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaatttcc 12779707  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  12779708 ctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 15636870 - 15636735
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  15636870 tgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 15636771  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||| ||||||    
T  15636770 taatttccctcgctaattttgctttttctggtagtg 15636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 20065209 - 20065074
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||| ||||| ||||||| ||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  20065209 tgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 20065110  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  20065109 taatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 27327613 - 27327752
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  27327613 taatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgt 27327712  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||| ||||| | || |||||||||||||| ||||||||||    
T  27327713 cacaaatttccatccctaattttgcttttcctagtagtgt 27327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 37552235 - 37552362
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||  | ||||| |||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |    
T  37552235 atttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 37552334  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  37552335 ctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 41736180 - 41736307
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||  | ||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |    
T  41736180 atttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttcc 41736279  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  41736280 ctcgctaattttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 473 - 599
Target Start/End: Complemental strand, 13613219 - 13613093
Alignment:
Q  473 tttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcc 572  Q
    |||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  13613219 tttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcactaattttcc 13613120  T
Q  573 tcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| ||||||| |||||||    
T  13613119 tcgctaatttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 1141536 - 1141664
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  1141536 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 1141635  T
Q  564 taattttcctcgctaattttgctttttct 592  Q
    |||||| ||||||||||||||||||||||    
T  1141636 taatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 23858084 - 23857958
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||| |    
T  23858084 atttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-ttttcccgtcactaatttcc 23857986  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  23857985 ctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 30783338 - 30783473
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||||    
T  30783338 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccgtcac 30783437  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||  |||||||||||||| |||||||||    
T  30783438 aaatttcccttcctaattttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 32185832 - 32185967
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||||||| |||| | | |||||| ||||||||||||||||||||||||    
T  32185832 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccgtcac 32185931  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||| ||||||||||||||    
T  32185932 taatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 464 - 598
Target Start/End: Complemental strand, 23388513 - 23388379
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||||    
T  23388513 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccgtcac 23388414  T
Q  564 taattttcctcgctaattttgctttttctagtagt 598  Q
     ||||| |||||||||||||| |||||||||||||    
T  23388413 caatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 29749530 - 29749403
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||| ||||| |    
T  29749530 atttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttcc 29749431  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||  ||||||||||||||||||||||||    
T  29749430 cttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 37724119 - 37723992
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| ||||||| ||| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |    
T  37724119 atttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 37724020  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||| |||||||||| ||||    
T  37724019 ctcgctgatttttctttttctagcagtg 37723992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 7093578 - 7093703
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| ||||||||||  |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    |||||||||||||||| |||||||||    
T  7093678 cgctaattttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 464 - 596
Target Start/End: Original strand, 28262364 - 28262496
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||| ||| | | |||||||||||||||||||||||||| ||||    
T  28262364 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccatcac 28262463  T
Q  564 taattttcctcgctaattttgctttttctagta 596  Q
    |||||| ||| ||||||||| ||||||||||||    
T  28262464 taatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 27040003 - 27039908
Alignment:
Q  504 aattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 31266354 - 31266489
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |     
T  31266354 tgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtaaa 31266453  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||| ||||| |||||||||    
T  31266454 aaatttccctccctaattttacttttcctagtagtg 31266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 8430296 - 8430431
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||||||| |||  |   |||||||||||||||| ||||||||||||||    
T  8430296 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccgtcac 8430395  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| || ||||||||||| ||||||||||||||    
T  8430396 taatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 9004443 - 9004308
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||  | |||| ||||||||||||| |||||||||||||  |||||||||||| |||| |||||||||| |||||||||    
T  9004443 tgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttcttccgtcac 9004344  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||| ||||||| |||||||  ||||||||||||||    
T  9004343 taatattcctcgttaattttattttttctagtagtg 9004308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 470 - 601
Target Start/End: Original strand, 36550842 - 36550972
Alignment:
Q  470 atatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 569  Q
    ||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||| ||  || |||||||| |||| ||||||||| ||||||||||    
T  36550842 atatttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagggattt-attttttccatcactaattt 36550940  T
Q  570 tcctcgctaattttgctttttctagtagtgta 601  Q
     |||| ||||||||| ||||||||||||||||    
T  36550941 ccctctctaattttgttttttctagtagtgta 36550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 498 - 600
Target Start/End: Complemental strand, 26243422 - 26243320
Alignment:
Q  498 ctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtag 597  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||| |||||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  26243422 ctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccctcgttaattttgctttttctagtag 26243323  T
Q  598 tgt 600  Q
    |||    
T  26243322 tgt 26243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 26687818 - 26687690
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtcactaatttt 570  Q
    ||||||| | |||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||| ||||| | |||||||||||| ||||||     
T  26687818 atttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttccgtcattaatttc 26687719  T
Q  571 cctcgctaattttgctttttctagtagtg 599  Q
    ||||  |||||||||||| ||||||||||    
T  26687718 cctccttaattttgctttatctagtagtg 26687690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 40018810 - 40018937
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| |||||||||||||||||||||||||||||  ||||| |||||||| || || |||||||| || ||||| |||||||||||||||||||| |    
T  40018810 atttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtcactaatttcc 40018909  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||   |||||||| ||||||||||||||    
T  40018910 ctttttaattttgttttttctagtagtg 40018937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 2556111 - 2556231
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||  |||||| | |||||||||||||||||||||||| | || ||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||    
T  2556111 agggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcctctctaa 2556210  T
Q  580 ttttgctttttctagtagtgt 600  Q
    |||| |||||| |||||||||    
T  2556211 ttttactttttttagtagtgt 2556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 38362390 - 38362276
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| | |||||  | |||||||| |||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| |||  ||||    
T  38362390 agggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcccttactaa 38362291  T
Q  580 ttttgctttttctag 594  Q
    |||||||||||||||    
T  38362290 ttttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 27523011 - 27523084
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaattt 537  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  27523011 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 464 - 589
Target Start/End: Complemental strand, 44366132 - 44366007
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||||||  |||||| ||| ||||||||||||| |||||||||||| ||| | ||||||| ||| || ||||||||||||||||| |||||||| ||||     
T  44366132 tgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcat 44366033  T
Q  564 taattttcctcgctaattttgctttt 589  Q
    |||||| |||| ||||||||| ||||    
T  44366032 taatttccctctctaattttgttttt 44366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 484 - 582
Target Start/End: Original strand, 35697475 - 35697573
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    ||||||||||||  |||||||||||||||||||||||||||||| ||  ||||||||||  |||| ||||||||||| |||||||| |||| |||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 467 - 600
Target Start/End: Original strand, 18609517 - 18609650
Alignment:
Q  467 gggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaa 566  Q
    |||| ||||||| ||||||||||||||||  |||||||||| | | || |||||||||||  ||||||||||||||| |||  ||||| |||||||||||    
T  18609517 gggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaa 18609616  T
Q  567 ttttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||||  || |||| ||||| ||| ||||||    
T  18609617 ttttcctccttatttttacttttcctaatagtgt 18609650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 480 - 589
Target Start/End: Complemental strand, 18916519 - 18916411
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||  ||  ||||||||||| |||| | ||||||||||| |||||| |||  ||||    
T  18916519 agggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggatttta-tttttccgtcagtaatttccctgcctaa 18916421  T
Q  580 ttttgctttt 589  Q
    ||||||||||    
T  18916420 ttttgctttt 18916411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 587
Target Start/End: Original strand, 8763642 - 8763757
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| | |||||||||||||||  ||||||||||||||| ||||||||  ||  |||||||||||| |  |||| ||||||||||||||||| |||     
T  8763642 atttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaactttt 8763741  T
Q  572 ctcgctaattttgctt 587  Q
    ||| ||||||||||||    
T  8763742 ctccctaattttgctt 8763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 31966643 - 31966554
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||||||||||||||||||||  || ||||||||||||||| ||||||||| | ||| |||| |||||||||||||||||||||    
T  31966643 agggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaatttt 31966554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 500 - 600
Target Start/End: Original strand, 36373934 - 36374034
Alignment:
Q  500 ctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||| ||||||||||||| |||  |||||||||| |||| |||| |||||||||||| |||| ||| ||| ||||||||| |||| |||||||||    
T  36373934 ctctaattcagtcactaaattttacgatcaaggaatttgagagggattttattttttccgtcgctaaatttactccctaattttgtttttcctagtagtg 36374033  T
Q  600 t 600  Q
    |    
T  36374034 t 36374034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 37802513 - 37802379
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| | |||||  ||||||||||||||||||||||||||||| ||  || ||| |||  |||| |||||||||||||     
T  37802513 tgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaa-aaaattgcgagagattttattttttccgtcat 37802415  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     |||||  ||| |||||||||||||| |||||||||    
T  37802414 caatttctctccctaattttgcttttcctagtagtg 37802379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 533 - 593
Target Start/End: Complemental strand, 12860295 - 12860235
Alignment:
Q  533 aatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttcta 593  Q
    |||| |||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  12860295 aattagtgagggatttcactttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 13134737 - 13134650
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 569  Q
    ||||||| ||||||| || |||||||  |||| |||||||| |||||||  || |||||||| |||| ||||||||||||||||||||    
T  13134737 ggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtcactaattt 13134650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 582
Target Start/End: Original strand, 9590490 - 9590588
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    ||||| ||||||| ||||||||||  || ||||||||||||||  ||| ||||| | |   ||||||||||||||||||||||||| |||| |||||||    
T  9590490 aaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcattttttccgtcactaatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 599
Target Start/End: Complemental strand, 16098999 - 16098917
Alignment:
Q  517 aattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||| || |||||| |||||||  |||| |||||||| || |||||||| |||| ||||||||| ||||||||||||||    
T  16098999 aattttgcaaccaaggaaattgtgagagatttaattttttctgttactaatttccctccctaattttgatttttctagtagtg 16098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 22192248 - 22192314
Alignment:
Q  533 aatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||  |||| ||||||||||||||||||||  ||| || |||||||||||||||||||||    
T  22192248 aatttgtgagagattttattttttccgtcactaatttctctccctgattttgctttttctagtagtg 22192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 525
Target Start/End: Complemental strand, 29998676 - 29998633
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcg 525  Q
    ||||||| |||||||  |||||||||||||||||||||||||||    
T  29998676 ggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 115; Significance: 6e-58; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 464 - 602
Target Start/End: Original strand, 3746 - 3884
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 3845  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3846 taattttcctcgctaattttgctttttctagtagtgtat 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 202786 - 202913
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |    
T  202786 atttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttcc 202885  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||| |||||||||||||||    
T  202886 ctcgctaatttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 531 - 599
Target Start/End: Complemental strand, 274733 - 274665
Alignment:
Q  531 ggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  274733 ggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 526
Target Start/End: Complemental strand, 276269 - 276207
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcga 526  Q
    ||||||| |||| || || |||||| ||||||| |||||||||||||||||||||||||||||    
T  276269 tgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 4e-56; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 8428171 - 8428306
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  8428171 tgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcac 8428270  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||  ||||||||||||||    
T  8428271 taatttccctcgctaattttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 472 - 601
Target Start/End: Original strand, 13921333 - 13921462
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13921333 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattttc 13921432  T
Q  572 ctcgctaattttgctttttctagtagtgta 601  Q
    ||||||||||||||||||||||||||||||    
T  13921433 ctcgctaattttgctttttctagtagtgta 13921462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 25882570 - 25882706
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  25882570 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccgtcac 25882669  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  25882670 taatttccctcgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 17762642 - 17762777
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  17762642 tgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcac 17762741  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||| | ||||||||||||    
T  17762742 taatttccctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 19063962 - 19064097
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  19063962 tgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcac 19064061  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||| | ||||||||||||    
T  19064062 taatttccctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 26098823 - 26098948
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  26098923 cgctaattttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 26390769 - 26390633
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  26390769 tgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcac 26390670  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||  |||||||||||||||||||||||||||||    
T  26390669 taatttctctcgctaattttgctttttctagtagtgt 26390633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 18091682 - 18091547
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  18091682 tgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcac 18091583  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||| ||||||||    
T  18091582 taatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 27449088 - 27449223
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  27449088 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 27449187  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  27449188 taatttccctcgctaattttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 48404868 - 48404995
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  48404868 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 48404967  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  48404968 ctcgctaattttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 1311094 - 1310958
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| | ||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1311094 tgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgtcac 1310995  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1310994 taattttccttgctaattttgctttttctagtagtgt 1310958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 9652578 - 9652714
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  9652578 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcac 9652677  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||||| |||||||||||||||||||||||    
T  9652678 taatttccctcgccaattttgctttttctagtagtgt 9652714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 18104665 - 18104529
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||     
T  18104665 tgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccgtcaa 18104566  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  18104565 taatttccctcgctaattttgctttttctagtagtgt 18104529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 19269999 - 19269863
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19269999 tgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19269900  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  19269899 taatttccctcgctaattttgctttttctaatagtgt 19269863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 5260937 - 5261072
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| || |||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5260937 tgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 5261036  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||| ||||||||||||||||||||||||    
T  5261037 taatttccctcactaattttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 5744426 - 5744551
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||||||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5744525  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | |||||||||||||| |||||||||    
T  5744526 ccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 5781385 - 5781510
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||||||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5781484  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | |||||||||||||| |||||||||    
T  5781485 ccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 470 - 599
Target Start/End: Complemental strand, 10941794 - 10941665
Alignment:
Q  470 atatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 569  Q
    ||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10941794 atatttaatgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 10941695  T
Q  570 tcctcgctaattttgctttttctagtagtg 599  Q
     |||  ||||||||||||||||||||||||    
T  10941694 cccttactaattttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 603
Target Start/End: Original strand, 11915758 - 11915897
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||||    
T  11915758 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcac 11915857  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtatg 603  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  11915858 taatttccctcgctaattttgctttttctagtagtatatg 11915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 19223449 - 19223584
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||||||  |||||||| | ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  19223449 tgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcac 19223548  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||||||||||||||||||||||||||||    
T  19223549 caatttccctcgctaattttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 19610338 - 19610473
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  19610338 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 19610437  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||||||||| |||||||||    
T  19610438 aaatttccctccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 21816729 - 21816856
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  21816729 atttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 21816828  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||| |||||||||||||||    
T  21816829 ctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 461 - 599
Target Start/End: Complemental strand, 11837352 - 11837214
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| |    
T  11837352 taatgagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccat 11837253  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||| ||||| |||||||||||||| ||||||||||||||    
T  11837252 cacgaatttccctcgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 15064117 - 15063991
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 15064018  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    | |||||||||||||| ||||||||||    
T  15064017 ccctaattttgcttttcctagtagtgt 15063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 1745612 - 1745488
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccct 1745514  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||| ||||||||    
T  1745513 cgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 484 - 601
Target Start/End: Original strand, 8546265 - 8546382
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 583  Q
    ||||| ||||||| |||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  584 gctttttctagtagtgta 601  Q
    ||||||||| ||||||||    
T  8546365 gctttttctggtagtgta 8546382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 8110339 - 8110475
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||  |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  8110339 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccgtcac 8110438  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||| |||||||||||||||||||||||||    
T  8110439 taatttccctcactaattttgctttttctagtagtgt 8110475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 11007818 - 11007683
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  11007818 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccgtcac 11007719  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||  ||||||||||||||||||||||||    
T  11007718 taatttcccttactaattttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 11219154 - 11219273
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11219154 agggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaa 11219253  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||| ||||||||||||||    
T  11219254 ttttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 29215992 - 29216127
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  29215992 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 29216091  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||||||||  ||||||||||||| |||||||||    
T  29216092 aaattttcctccataattttgcttttcctagtagtg 29216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 13905163 - 13905037
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    | |||||||||||||||||||||||||    
T  13905063 ctctaattttgctttttctagtagtgt 13905037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 461 - 599
Target Start/End: Original strand, 29956369 - 29956507
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| |||| || ||||||||  ||||||| || ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |    
T  29956369 taatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccat 29956468  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  29956469 cactaatttccctcgctaattttactttttctagtagtg 29956507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 461 - 599
Target Start/End: Original strand, 30005524 - 30005662
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| |||| || ||||||||  ||||||| || ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |    
T  30005524 taatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccat 30005623  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  30005624 cactaatttccctcgctaattttactttttctagtagtg 30005662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 43329888 - 43329763
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  | |||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  43329788 cgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 16299861 - 16299996
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  16299861 tgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 16299960  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     |||||  ||| |||||||||||||| |||||||||    
T  16299961 aaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 29236052 - 29236179
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||||||| |    
T  29236052 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaatttcc 29236151  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    |||||||||||||||||||||| |||||    
T  29236152 ctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 23773487 - 23773612
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttccct 23773586  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
      ||||||||| ||||||||||||||    
T  23773587 tactaattttgttttttctagtagtg 23773612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 18539804 - 18539932
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | ||||| |||||||||||||||||||||||||    
T  18539804 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccgtcac 18539903  T
Q  564 taattttcctcgctaattttgctttttct 592  Q
    |||||| |||| |||||||||||||||||    
T  18539904 taatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 7623666 - 7623531
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||  ||||||| |||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||    
T  7623666 tgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccgtcac 7623567  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||||||| ||||| |||||||||||||||    
T  7623566 taatttccctcgctgatttttctttttctagtagtg 7623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 472 - 583
Target Start/End: Original strand, 28859599 - 28859710
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||| ||||| | ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  28859599 atttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattttc 28859698  T
Q  572 ctcgctaatttt 583  Q
    ||||||||||||    
T  28859699 ctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 4393485 - 4393348
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||   | |||||||||| ||||||||||||||||||||    
T  4393485 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcac 4393386  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| |||| ||||||||||||||||| | ||||||    
T  4393385 taatttccctcactaattttgctttttctggcagtgta 4393348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 46012853 - 46012728
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| ||||||||||  |||||||||||||||||  ||||||||||||||  |||| ||||||||||||||||||||||||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcct 46012754  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | || |||||||||||||||||||||    
T  46012753 ccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 464 - 596
Target Start/End: Original strand, 28389973 - 28390105
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||| || |||||||||||  |||| ||||||||||||||    
T  28389973 tgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcac 28390072  T
Q  564 taattttcctcgctaattttgctttttctagta 596  Q
    ||||||||||| || ||||| ||||||||||||    
T  28390073 taattttcctctctgattttactttttctagta 28390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 30219338 - 30219474
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| ||  ||||| |||||||||| || |||||||||||    
T  30219338 tgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcac 30219437  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
     ||||| |||| |||||||||||||| ||||||||||    
T  30219438 aaatttccctccctaattttgcttttcctagtagtgt 30219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 31250088 - 31250223
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||||  ||||| ||||||||||| |||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||    
T  31250088 tgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcac 31250187  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||| |||||| |||||||||| |||||||||||||    
T  31250188 taatcttcctccctaattttgcattttctagtagtg 31250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 36543749 - 36543884
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||||||||||| |||||||||| ||||||||||||||||||| || |||| ||||||  |||| ||||||||| ||||    
T  36543749 tgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttccatcac 36543848  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| |||||||| |||||||||||||||    
T  36543849 taattttcctccctaatttttctttttctagtagtg 36543884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 464 - 570
Target Start/End: Original strand, 19545510 - 19545616
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||| ||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19545510 tgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19545609  T
Q  564 taatttt 570  Q
    |||||||    
T  19545610 taatttt 19545616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 473 - 599
Target Start/End: Original strand, 21020074 - 21020200
Alignment:
Q  473 tttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcc 572  Q
    |||||| ||||||||||| |||||  |||||||||||||||||||||||||| || ||||||||||||||  |||| |||||||||||||||||||| ||    
T  21020074 tttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccc 21020173  T
Q  573 tcgctaattttgctttttctagtagtg 599  Q
    || |||||||||||||| |||||||||    
T  21020174 tccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 3461435 - 3461310
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||||||| ||||||||||||  ||| |||||||||||||||| |||||||| ||||||||||| | |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  3461335 cgctaattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 464 - 596
Target Start/End: Original strand, 1628215 - 1628347
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||||| |||     
T  1628215 tgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttccatcat 1628314  T
Q  564 taattttcctcgctaattttgctttttctagta 596  Q
    |||||| |||| |||||||| ||||||||||||    
T  1628315 taatttccctccctaattttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 11085469 - 11085341
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| |||||||   ||||||| |||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||| ||||      
T  11085469 atttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccgttactgatttct 11085370  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||| ||||||||||||||||    
T  11085369 ctcgctaattttactttttctagtagtgt 11085341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 26830577 - 26830441
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtca 562  Q
    ||||||| ||||||  ||||||||| ||||||| ||||||||||||||||| |||||||||||| | |||||||||||||||||| | ||||||||||||    
T  26830577 tgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttccgtca 26830478  T
Q  563 ctaattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||||||||| |||||||| ||||||||| |||||    
T  26830477 ttaattttcctccctaatttttctttttctaatagtg 26830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 474 - 601
Target Start/End: Original strand, 5565732 - 5565859
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| ||||||| ||||||||||  |||||||||||||||||| ||| ||||||||||  |||| |||||||||||||||||||| |||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  574 cgctaattttgctttttctagtagtgta 601  Q
    | || |||||||||||||||||||||||    
T  5565832 ccctgattttgctttttctagtagtgta 5565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 49915451 - 49915586
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |||| || |||||||||||    
T  49915451 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccgtcac 49915550  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| ||||  ||||||| |||||  ||||||||    
T  49915551 aaatttccctctttaattttacttttcttagtagtg 49915586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 17582436 - 17582330
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  17582436 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcac 17582337  T
Q  564 taatttt 570  Q
    |||||||    
T  17582336 taatttt 17582330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 464 - 590
Target Start/End: Complemental strand, 29704167 - 29704041
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || || |||||| ||||||| |||| ||||||||||||||||||||||||  |   |||||||||||||||||||||||||||||||    
T  29704167 tgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccgtcac 29704068  T
Q  564 taattttcctcgctaattttgcttttt 590  Q
    |||||| ||||||||||||||||||||    
T  29704067 taatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 17269729 - 17269604
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||| ||||||||| ||  |||||| | |    
T  17269729 ttagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccat 17269630  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  17269629 cgctaattttgctttttctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 21490159 - 21490034
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  | ||||| ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| |||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccct 21490060  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | ||||||||| ||||||||||||||    
T  21490059 cactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 465 - 600
Target Start/End: Original strand, 10803721 - 10803857
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtcac 563  Q
    |||||| ||||||| ||||||||| | ||||  |||| ||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||     
T  10803721 gagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttccgtcat 10803820  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||| ||||||| |||||||||||||||||    
T  10803821 taatttccctccctaatttggctttttctagtagtgt 10803857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 18380024 - 18380159
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||| | ||||||||  | ||||| |||| |||||||||||||||||||| |||  ||| ||||||||| |||||||||||||||||||||    
T  18380024 tgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccgtcac 18380123  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    | |||| ||||||||||||| |||||||||||||||    
T  18380124 tgatttccctcgctaattttactttttctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 36564574 - 36564439
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||| ||||||||| |||||||||| |||||||||||| |||||| || |||| ||| ||| |||| ||||||||| ||||    
T  36564574 tgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttccatcac 36564475  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||| |||||||| |||||||||||||||    
T  36564474 taattttcctccctaatttttctttttctagtagtg 36564439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 47263392 - 47263265
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | |||| ||| ||||| || |||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| |    
T  47263392 atttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaatttcc 47263293  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
     ||| |||||||||||||||||||||||    
T  47263292 ttcgttaattttgctttttctagtagtg 47263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 472 - 601
Target Start/End: Original strand, 21088760 - 21088887
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||  |||||||||||| ||||||||||||||  |||| |||||||||||||||||||| |    
T  21088760 atttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtcactaatttcc 21088857  T
Q  572 ctcgctaattttgctttttctagtagtgta 601  Q
    ||| |||| |||||||||  ||||||||||    
T  21088858 ctccctaactttgcttttcttagtagtgta 21088887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 480 - 602
Target Start/End: Original strand, 46942503 - 46942625
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||| ||| || |||||||| |||| |||||||| ||||||||||| | || ||||    
T  46942503 agggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcactaatttccttccctaa 46942602  T
Q  580 ttttgctttttctagtagtgtat 602  Q
    ||||| |||||||||||||||||    
T  46942603 ttttgatttttctagtagtgtat 46942625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 6088353 - 6088228
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | |||||  ||||||||||||| | ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttccct 6088254  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
      || |||||||||||||||||||||    
T  6088253 tacttattttgctttttctagtagtg 6088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 50665761 - 50665636
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||  || ||||||||||||||||| || ||||||||||  ||||| |||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccct 50665662  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    | ||||||||||||||  ||||||||    
T  50665661 ctctaattttgcttttcttagtagtg 50665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 472 - 599
Target Start/End: Complemental strand, 10772181 - 10772053
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtcactaatttt 570  Q
    ||||||| |||||||| |||||||| |||||||||| ||||| ||||||||||||||||  ||||||||| ||||| || ||||||| |||||||||||     
T  10772181 atttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaatttc 10772082  T
Q  571 cctcgctaattttgctttttctagtagtg 599  Q
    ||||| ||||||| |||||||||||||||    
T  10772081 cctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 29451102 - 29451230
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| ||||||||||||||| | ||||||||| ||| |||||||| |||| |||||||||||||||||||||||||| |    
T  29451102 atttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccgtcactaatttcc 29451201  T
Q  572 ctcgctaattttg-ctttttctagtagtg 599  Q
    |||| ||||||||  ||||||||||||||    
T  29451202 ctcgttaattttgtttttttctagtagtg 29451230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 8543469 - 8543603
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||| ||||||||||||| | | || |||| |||||||||| ||||||| ||||    
T  8543469 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttca-tttttccatcac 8543567  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||| |||||||| |||||    
T  8543568 taatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 23217327 - 23217208
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| ||| |  ||||||||||||||||| ||||||||| ||| |||||| |||| ||||    
T  23217327 agggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcattaatttccctccctaa 23217228  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||| ||||||||    
T  23217227 tttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 31433737 - 31433872
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||||||  ||||| |||||||||| ||||||  ||||||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||  ||||    
T  31433737 tgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttctatcac 31433836  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||  |||||||| |||||| ||||||||    
T  31433837 taatttccctatctaattttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 6718726 - 6718816
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  6718726 agggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttt 6718816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 472 - 601
Target Start/End: Complemental strand, 27182783 - 27182656
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||| ||| ||| |||| |||||||||| |||| |||||||  ||||||||||| |    
T  27182783 atttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttatttttt--gtcactaatttcc 27182686  T
Q  572 ctcgctaattttgctttttctagtagtgta 601  Q
    ||| ||||||||| |||| |||||||||||    
T  27182685 ctccctaattttgtttttcctagtagtgta 27182656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 490 - 599
Target Start/End: Original strand, 37283549 - 37283658
Alignment:
Q  490 tgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttt 589  Q
    ||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||| ||||| |||| ||||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  590 tctagtagtg 599  Q
     ||| |||||    
T  37283649 cctaatagtg 37283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  504 aattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||| |||| || |||||||||||||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 472 - 598
Target Start/End: Original strand, 27968923 - 27969049
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||| ||  ||  ||||||  |||| |||| ||||||||||||||| |    
T  27968923 atttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccgtcactaatttcc 27969022  T
Q  572 ctcgctaattttgctttttctagtagt 598  Q
    ||| || ||||||||||||||||||||    
T  27969023 ctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 27212916 - 27212810
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||| ||||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||||| |||| ||||||||  ||||    
T  27212916 tgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttctatcac 27212817  T
Q  564 taatttt 570  Q
    |||||||    
T  27212816 taatttt 27212810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 15490035 - 15490169
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| || |||||| ||||||| |||| |||||  |||||||||||||||||| ||  ||||||||||  |||| ||||||| ||||||    
T  15490035 tgagggaaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcgtcac 15490133  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||||| ||| || |||||||||||| ||||||||    
T  15490134 taatttttctccctgattttgctttttttagtagtg 15490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 15501652 - 15501551
Alignment:
Q  499 tctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttt-ccgtcactaattttcctcgctaattttgctttttctagtag 597  Q
    |||||||||||||| ||||||||| |||  ||| ||||| ||| |||||||||||||| |||||| ||||||| |||||||||||| |||||||||||||    
T  15501652 tctctaattccgtccctaaattttacgatcaagaaatttatgaagaatttcatttttttccgtcattaatttttctcgctaattttactttttctagtag 15501553  T
Q  598 tg 599  Q
    ||    
T  15501552 tg 15501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 461 - 594
Target Start/End: Complemental strand, 26963387 - 26963254
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| ||||||| ||||||||  | ||||  |||||||||||||| |||||||||| | || || | |||||| |  ||||||||||||| |||    
T  26963387 taatgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgt 26963288  T
Q  561 cactaattttcctcgctaattttgctttttctag 594  Q
    ||||||||| ||||| |||||||| |||||||||    
T  26963287 cactaatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 492 - 600
Target Start/End: Complemental strand, 6447353 - 6447245
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    |||||| | |||||||| ||||||||| |||| ||| || |||| || ||||||||| ||||||||| |||||||||| |||| |||||||||||||| |    
T  6447353 aaatctttttctaattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcc 6447254  T
Q  592 tagtagtgt 600  Q
    |||||||||    
T  6447253 tagtagtgt 6447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 50240756 - 50240852
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||| ||||||||||||||||||||||  || ||||||||||||| | ||||||||| ||||  |||| |||||||||||||||||||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaatttt 50240852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 482 - 600
Target Start/End: Original strand, 13615433 - 13615551
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 581  Q
    ||||||| ||||||  |||||||||| | |||||||||||||||  |||| |||||||||||  ||| |||| ||||||||||| ||||| |  ||||||    
T  13615433 ggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggttttatttcttccgtcactatttttctttcctaatt 13615532  T
Q  582 ttgctttttctagtagtgt 600  Q
    |||||||||||| ||||||    
T  13615533 ttgctttttctaatagtgt 13615551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 568
Target Start/End: Complemental strand, 27711285 - 27711199
Alignment:
Q  482 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatt 568  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||  | ||||| ||| | || ||||||||| |||||||||    
T  27711285 ggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaaaagtttgtaagggaatttattttttccttcactaatt 27711199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 472 - 600
Target Start/End: Original strand, 20088408 - 20088541
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttt-----tccgtcactaa 566  Q
    ||||||| ||| |||||||||||||  ||||||||||| ||||||||||||| ||| || |||||| |||| ||||| ||||||     |  ||| ||||    
T  20088408 atttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttttatatatgtcgctaa 20088507  T
Q  567 ttttcctcgctaattttgctttttctagtagtgt 600  Q
    ||| |||| |||||||| ||||||||||||||||    
T  20088508 tttccctctctaattttactttttctagtagtgt 20088541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 464 - 583
Target Start/End: Complemental strand, 20615478 - 20615359
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  | ||||||| ||||||  ||||||||||| |||| |||||||| |||| ||  ||||||||||  |||| |||||||||||| |    
T  20615478 tgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccgtctc 20615379  T
Q  564 taattttcctcgctaatttt 583  Q
    |||||||||||  |||||||    
T  20615378 taattttcctccttaatttt 20615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 472 - 569
Target Start/End: Original strand, 45304342 - 45304439
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 569  Q
    ||||||| ||| |||| ||||||| ||| |  |||||||||| |||||||||  ||||| ||| |||| |||||||| ||||||||||||| ||||||    
T  45304342 atttagtgaggaaaaatatgaaatttcttttaaattccgtcattaaattttgtaactaaagaaattgttaggaattttattttttccgtcattaattt 45304439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 474 - 549
Target Start/End: Complemental strand, 23233288 - 23233213
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttc 549  Q
    ||||| ||||||||| ||||||  ||||| |||||| ||||||||||||||||| || | ||||||||| ||||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaatttc 23233213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 597
Target Start/End: Original strand, 11386427 - 11386468
Alignment:
Q  556 tccgtcactaattttcctcgctaattttgctttttctagtag 597  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttctagtag 11386468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 519
Target Start/End: Complemental strand, 35579652 - 35579605
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaat 519  Q
    ||||||| ||||||||| | ||||| ||||||||||||||||||||||    
T  35579652 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 111; Significance: 2e-55; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 8245 - 8107
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||     
T  8245 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcat 8146  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  8145 taatttccctcgctaattttgctttttctagaagtgtat 8107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 21977 - 21839
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||     
T  21977 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcat 21878  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  21877 taatttccctcgctaattttgctttttctagaagtgtat 21839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 84307 - 84442
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||  ||||||| |||||||||||||||||||||||||| ||| | | |||||||||||||||||||||||||||||||    
T  84307 tgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccgtcac 84406  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||| |||||||||||||||||||||||||    
T  84407 taatttcccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 9e-54; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 22168270 - 22168405
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  22168270 tgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccgtcac 22168369  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  22168370 taatttccctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 2275813 - 2275676
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  2275813 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcac 2275714  T
Q  564 taattttcctcgctaa-ttttgctttttctagtagtgt 600  Q
    |||||| ||||||||| ||||| |||||||||||||||    
T  2275713 taatttccctcgctaatttttgttttttctagtagtgt 2275676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 464 - 594
Target Start/End: Complemental strand, 37378758 - 37378628
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||     
T  37378758 tgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcaa 37378659  T
Q  564 taattttcctcgctaattttgctttttctag 594  Q
    |||||||||||||||||||||||||||||||    
T  37378658 taattttcctcgctaattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 55309348 - 55309211
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatt-ttttccgtca 562  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  55309348 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtca 55309249  T
Q  563 ctaattttcctcgctaattttgctttttctagtagtgt 600  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  55309248 ctaatttccctcgctaattttgctttttctagtagtgt 55309211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 472 - 603
Target Start/End: Complemental strand, 13028943 - 13028812
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  13028943 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattttc 13028844  T
Q  572 ctcgctaattttgctttttctagtagtgtatg 603  Q
    |||||||| |||||||||||||||||||||||    
T  13028843 ctcgctaagtttgctttttctagtagtgtatg 13028812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 19839189 - 19839316
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |    
T  19839189 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttcc 19839288  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  19839289 ctcgctaattttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 54539296 - 54539423
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54539296 atttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 54539395  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    || |||||||||||||||||||||||||    
T  54539396 cttgctaattttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 32175872 - 32175735
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  32175872 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcac 32175773  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  32175772 taatttccctcgttaattttgctttttctagtagtgta 32175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 4586885 - 4586757
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| |    
T  4586885 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaatttcc 4586786  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||||    
T  4586785 ctcgctaattttgctttttctagtagtgt 4586757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 472 - 600
Target Start/End: Original strand, 25026567 - 25026695
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  25026567 atttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaatttcc 25026666  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    ||| |||||||| ||||||||| ||||||    
T  25026667 ctcactaattttactttttctaatagtgt 25026695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 44783481 - 44783621
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctct-ctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccg 559  Q
    ||||||||||||||||   | ||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  44783481 taatgagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 44783580  T
Q  560 tcactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  44783581 tcactaatttccctcgctagttttgctttttctagtagtgt 44783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 9670604 - 9670479
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    |||||||||| |||||||||||||||    
T  9670504 cgctaatttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 29625337 - 29625462
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||| || |||||    
T  29625437 cgctaattttgctttttatattagtg 29625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 5399611 - 5399746
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||||||    
T  5399611 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccgtcac 5399710  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     |||||||||| |||| ||||||||| |||||||||    
T  5399711 aaattttcctccctaagtttgcttttcctagtagtg 5399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 5473859 - 5473986
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |    
T  5473859 atttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccgtcactaatttcc 5473958  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  5473959 ctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 9238744 - 9238625
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  9238744 agggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 9238645  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||||||||| ||||||||    
T  9238644 ttttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 27040160 - 27040025
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||  |||||||||||||    
T  27040160 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccgtcac 27040061  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||||||||||||||||||    
T  27040060 taatttccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 30269123 - 30268985
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||  | |||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||    
T  30269123 tgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcac 30269024  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    | |||| ||||||||||||||||||||||||||||||||    
T  30269023 tgatttccctcgctaattttgctttttctagtagtgtat 30268985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 464 - 602
Target Start/End: Original strand, 30283066 - 30283204
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||  | |||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||    
T  30283066 tgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcac 30283165  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    | |||| ||||||||||||||||||||||||||||||||    
T  30283166 tgatttccctcgctaattttgctttttctagtagtgtat 30283204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 464 - 602
Target Start/End: Complemental strand, 46286364 - 46286226
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||| ||||||||||||||    
T  46286364 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcac 46286265  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||||| | || |||||||||||||||||||||||||||    
T  46286264 taatttccgtcactaattttgctttttctagtagtgtat 46286226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 38645762 - 38645887
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| |||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  38645862 cgctaattttgctttttctagtagtg 38645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 13565050 - 13564914
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||  |||||||||||||||||||||||||  ||| ||||||||||||| |||||||||| ||||||||||    
T  13565050 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcac 13564951  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||||||||||||    
T  13564950 taatttccctcgctaattttgctttttctagtagtgt 13564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 45532714 - 45532578
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  45532714 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcac 45532615  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||| ||||||||||||||||| ||||||    
T  45532614 taatttccctcgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 18714912 - 18715039
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||||||| ||||| | ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||| |    
T  18714912 atttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttatttcc 18715011  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||| ||||||||||||||||||    
T  18715012 ctcgctaatattgctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 461 - 600
Target Start/End: Complemental strand, 19680562 - 19680423
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| |||| || ||||||||| | ||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  19680562 taatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgt 19680463  T
Q  561 cactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| || |||| |||||||| ||||||||||||||||    
T  19680462 cactaaattccctcactaatttttctttttctagtagtgt 19680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 464 - 602
Target Start/End: Original strand, 12071964 - 12072102
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||  ||||    
T  12071964 tgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcgatcac 12072063  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtat 602  Q
    ||||||  |||||||||||||||||||||| ||||||||    
T  12072064 taatttcgctcgctaattttgctttttctaatagtgtat 12072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 474 - 600
Target Start/End: Original strand, 38619859 - 38619985
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||||| |||||| |||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccct 38619958  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||    
T  38619959 cgctaattttgctttttctagtagtgt 38619985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 7112071 - 7111946
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  | ||||| |||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| |||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  7111971 cgctaattttgctttttctagtagtg 7111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 30507999 - 30508124
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||  ||||||||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||    
T  30508099 cgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 22128447 - 22128311
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||  |||| ||||||||||||||    
T  22128447 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcac 22128348  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||| || |||||| |||||||||||||||    
T  22128347 taatttccctccctgattttgttttttctagtagtgt 22128311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 472 - 598
Target Start/End: Complemental strand, 4627205 - 4627079
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||  | |||||||||||||||| |||||||||||||| |||  ||| |||||||||||||||||||||||||||||| |||||| |    
T  4627205 atttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaatttcc 4627106  T
Q  572 ctcgctaattttgctttttctagtagt 598  Q
    |||||||||||||||||||||||||||    
T  4627105 ctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 464 - 601
Target Start/End: Original strand, 18051841 - 18051978
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||   | |||||||||| ||||||||||||||||||||    
T  18051841 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcac 18051940  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| |||| ||||||||||||||||| | ||||||    
T  18051941 taatttccctcactaattttgctttttctggcagtgta 18051978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 464 - 589
Target Start/End: Original strand, 25147723 - 25147848
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||||     
T  25147723 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcat 25147822  T
Q  564 taattttcctcgctaattttgctttt 589  Q
     ||||| |||| ||||||||||||||    
T  25147823 aaatttccctctctaattttgctttt 25147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 33914061 - 33914196
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| ||  ||||| |||||||||| || |||||||||||    
T  33914061 tgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcac 33914160  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||||||||| |||||||||    
T  33914161 aaatttccctccctaattttgcttttcctagtagtg 33914196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 22156736 - 22156630
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||  ||||| ||||    
T  22156736 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcataatttccttcac 22156637  T
Q  564 taatttt 570  Q
    |||||||    
T  22156636 taatttt 22156630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 474 - 599
Target Start/End: Complemental strand, 9239406 - 9239281
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| ||||||| |||||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    || ||||||| || ||||| ||||||    
T  9239306 cgttaattttactctttcttgtagtg 9239281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 472 - 600
Target Start/End: Original strand, 16915379 - 16915507
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| |||||||| |||||||||||||||||||  |||||||||||||||||| ||  ||||||||||  |||| ||||||||| ||||||||||||    
T  16915379 atttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaattttc 16915478  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    ||| || ||||||||||||||||||||||    
T  16915479 ctccctgattttgctttttctagtagtgt 16915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 1638457 - 1638584
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||| || |||| ||||||| |||| |||||||||||||||||||| |    
T  1638457 atttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaatttcc 1638556  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||| ||||||||| |||| |||||||||    
T  1638557 ctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 8878893 - 8879020
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| || |||||| ||||  |||| |||||||||||||||||||| |    
T  8878893 atttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtcactaatttcc 8878992  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||| || |||||||||||||| ||||||    
T  8878993 ctctctgattttgctttttcttgtagtg 8879020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 9059071 - 9058952
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||| || ||||| ||||| ||||| |||| ||||    
T  9059071 agggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccctaa 9058972  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||||||||| |||||||||    
T  9058971 ttttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 9913276 - 9913395
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||| ||| || |||||||| |||| ||||||||||||||||||||||||| ||||    
T  9913276 agggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcactaattttcctccctaa 9913375  T
Q  580 ttttgctttttctagtagtg 599  Q
    ||||  ||||||||||||||    
T  9913376 ttttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 479 - 598
Target Start/End: Complemental strand, 24682447 - 24682328
Alignment:
Q  479 aagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgcta 578  Q
    |||||||||| ||||||| ||||||||||||  |||||||||||||||| | |||||||||||||||||| ||||||||||||| |||||| |||| |||    
T  24682447 aagggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctcccta 24682348  T
Q  579 attttgctttttctagtagt 598  Q
    ||||| ||||||||||||||    
T  24682347 atttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 492 - 599
Target Start/End: Original strand, 42055427 - 42055534
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||    
T  42055427 aaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttttc 42055526  T
Q  592 tagtagtg 599  Q
    ||||||||    
T  42055527 tagtagtg 42055534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 465 - 599
Target Start/End: Original strand, 36689680 - 36689814
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 564  Q
    |||||| |||||||  |||||||| ||||||| |||||||||||||||||||||||||||||| ||  ||||| |||| ||||||||||||||| |||||    
T  36689680 gagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttccatcact 36689779  T
Q  565 aattttcctcgctaattttgctttttctagtagtg 599  Q
    ||||| ||||| |||||||| ||||||| ||||||    
T  36689780 aatttccctcgttaattttgttttttcttgtagtg 36689814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 480 - 592
Target Start/End: Complemental strand, 30568118 - 30568006
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| | |||||||||||||||||||||| |||||||| |||| |  ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  30568118 agggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaatttcgctcgctaa 30568019  T
Q  580 ttttgctttttct 592  Q
    ||||| |||||||    
T  30568018 ttttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 43190413 - 43190298
Alignment:
Q  264 accaatctagtttgctactctgattctcttcactgcattaaccttgttaaaggccccttcttcaaatttcatgtttatggtcttttcattcaagacatca 363  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||| | |||| |||||||||||||    
T  43190413 accaatctagtttgctaccctgtttctcttcactgcattaacctcgttaaaggtcccttcttcaaattctatgtttatgatgttttgattcaagacatca 43190314  T
Q  364 aggagatgattgagca 379  Q
    ||||| ||||| ||||    
T  43190313 aggagctgattaagca 43190298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 14944758 - 14944854
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaatttt 14944854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 483 - 599
Target Start/End: Complemental strand, 30420149 - 30420033
Alignment:
Q  483 gaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    |||||||||||||  |||||||||| |||||||||||  | |||| ||| ||||||| | |||||| ||||||||||||||||||||||||| |||||||    
T  30420149 gaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattttcctccctaattt 30420050  T
Q  583 tgctttttctagtagtg 599  Q
    |||||||||||||||||    
T  30420049 tgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 38223512 - 38223648
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  |||||||||   ||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  38223512 tgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcac 38223611  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||| | |||| |||||||| | ||||||||| ||||    
T  38223612 taatctccctccctaattttacattttctagtggtgt 38223648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 12105995 - 12106119
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||| ||||| || |||||| |||| ||||| ||||||||| ||| |||||| |||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaattt-gcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  574 cgctaattttgctttttctagtagtg 599  Q
    |||||||||| ||||||||| |||||    
T  12106094 cgctaattttactttttctaatagtg 12106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 474 - 600
Target Start/End: Complemental strand, 4606954 - 4606828
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  ||||||| |||||||||||||||||||||||||||| | ||| |||||||||   |||| ||||| |||||||||||||| |||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
    | |||||||| ||||| ||||||||||    
T  4606854 ccctaattttacttttcctagtagtgt 4606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 18744205 - 18744099
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||||  ||| | | |||||||||| ||||||||||||||||||||    
T  18744205 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccgtcac 18744106  T
Q  564 taatttt 570  Q
    |||||||    
T  18744105 taatttt 18744099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 34557213 - 34557304
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 583  Q
    |||||| ||| ||||||||||| ||||||||| ||| ||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||    
T  34557213 aaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattttcctcactaatttt 34557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 45091284 - 45091398
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | |||||  ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||| |    
T  45091284 atttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga-------------gaggaatttcattttttccgtcactaatttcc 45091370  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||| ||||||||||||||    
T  45091371 ctcgctaattttgttttttctagtagtg 45091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 472 - 598
Target Start/End: Original strand, 29238433 - 29238559
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||| ||||||| |||||||| |||||||| ||||||||||||||  || || |||||||||||  |||| ||||||||||||| |||||| |    
T  29238433 atttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataatttcc 29238532  T
Q  572 ctcgctaattttgctttttctagtagt 598  Q
    ||| ||| ||||| |||| ||||||||    
T  29238533 ctccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 6553816 - 6553912
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||| ||||||||||| ||||||||||  || ||||||||||||||| ||| ||||| ||||| |||| |||||||||||||||||||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaatttt 6553912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 313605 - 313695
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||||||||| ||||||||||  || ||||||||||||||| || |||||| ||||| |||| |||||||||||||||||||||    
T  313605 agggataacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaatttt 313695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 527
Target Start/End: Complemental strand, 37761980 - 37761914
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgac 527  Q
    |||||||| | ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37761980 taatgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgac 37761914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 3613017 - 3613133
Alignment:
Q  484 aaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtga-ggaatttcattttttccgtcactaattttcctcgctaattt 582  Q
    ||||| ||||||  |||||||||| |||||||||| |||||||| ||||||||||||| |||||||  ||||||  | ||| || || |||| |||||||    
T  3613017 aaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattccctccctaattt 3613116  T
Q  583 tgctttttctagtagtg 599  Q
    ||||||||||| |||||    
T  3613117 tgctttttctaatagtg 3613133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 485 - 599
Target Start/End: Original strand, 23104371 - 23104486
Alignment:
Q  485 aaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtcactaattttcctcgctaatttt 583  Q
    |||||||||||| |||||||||   ||| |||||||||||||| |  |||||||||| |||||| | ||||||||||| || |||||  || ||||||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtgatgaattttatttttttccgtccctgatttttgtccctaatttt 23104470  T
Q  584 gctttttctagtagtg 599  Q
    | |||| |||||||||    
T  23104471 gtttttcctagtagtg 23104486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 490 - 600
Target Start/End: Original strand, 25225127 - 25225235
Alignment:
Q  490 tgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttt 589  Q
    ||||||| ||||||||||| || | ||||||||||||  || |||||||  ||  |||| || |||||||||| | |||| |||| |||||||| |||||    
T  25225127 tgaaatccctctctaattctgttattaaattttgcgatcaaagaatttgacag--attttatattttccgtcattgatttccctccctaatttttctttt 25225224  T
Q  590 tctagtagtgt 600  Q
    |||||||||||    
T  25225225 tctagtagtgt 25225235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 2297836 - 2297906
Alignment:
Q  272 agtttgctactctgattctcttcactgcattaaccttgttaaaggccccttcttcaaatttcatgtttatg 342  Q
    ||||||||| | |||||||||||| |||||||||||  ||||||  |||||||| ||||| ||||||||||    
T  2297836 agtttgctattgtgattctcttcattgcattaacctccttaaagatcccttcttgaaattccatgtttatg 2297906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 39234944 - 39235071
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcat-tttttccgtca 562  Q
    ||||||| ||||||  | ||||||| |||||||||  |||||||  || ||||||||||||||| ||  |||||||||| ||||| || ||||||||| |    
T  39234944 tgagggaaatttagagaaggaaaacgtgaaatctc--tctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttccgtta 39235041  T
Q  563 ctaattttcctcgctaattttgctttttct 592  Q
    | | ||| |||| ||||||||| |||||||    
T  39235042 caagtttccctccctaattttggtttttct 39235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 570
Target Start/End: Complemental strand, 45079618 - 45079555
Alignment:
Q  507 tccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    |||||| |||||| ||| ||| ||| ||||| ||||||||||||||||||| ||||| ||||||    
T  45079618 tccgtcgctaaatgttgtgacgaagaaatttatgaggaatttcattttttctgtcaccaatttt 45079555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 472 - 603
Target Start/End: Complemental strand, 10790 - 10659
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10790 atttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttcc 10691  T
Q  572 ctcgctaattttgctttttctagtagtgtatg 603  Q
    ||||||||||||||||||||||| ||||||||    
T  10690 ctcgctaattttgctttttctagcagtgtatg 10659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 22223 - 22350
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  22223 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaatttcc 22322  T
Q  572 ctcgctaattttgctttttctagtagtg 599  Q
    ||||||||||||||||||||||||||||    
T  22323 ctcgctaattttgctttttctagtagtg 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 102; Significance: 4e-50; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 1054 - 917
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttca-ttttttccgtca 562  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||| | ||||||||||||    
T  1054 tgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttccgtca 955  T
Q  563 ctaattttcctcgctaattttgctttttctagtagtgt 600  Q
     |||||| ||||||||||||||||||||||||||||||    
T  954 gtaatttccctcgctaattttgctttttctagtagtgt 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 9364 - 9228
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9364 tgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 9265  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||| |||||||||||||||||||||||||    
T  9264 taatttccctcactaattttgctttttctagtagtgt 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 100; Significance: 6e-49; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 6114 - 5979
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6114 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 6015  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| |||||||||||||| ||||||||||||||    
T  6014 taatttccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 100; Significance: 6e-49; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 219640 - 219775
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  219640 tgagagatatttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcac 219739  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| | |||||||||||||||||||||||||||    
T  219740 taatttccgtcgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 492 - 598
Target Start/End: Original strand, 182562 - 182668
Alignment:
Q  492 aaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 591  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  182562 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttactttttc 182661  T
Q  592 tagtagt 598  Q
    |||||||    
T  182662 tagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 520 - 599
Target Start/End: Complemental strand, 215742 - 215663
Alignment:
Q  520 tttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||    
T  215742 tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctctcgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 98; Significance: 9e-48; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 464 - 601
Target Start/End: Original strand, 26487 - 26624
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  26487 tgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 26586  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
    |||||| | || ||||||||||||||||||||||||||    
T  26587 taatttccgtcactaattttgctttttctagtagtgta 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 603
Target Start/End: Original strand, 7509 - 7648
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||||    
T  7509 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcac 7608  T
Q  564 taattttcctcgctaattttgctttttctagtagtgtatg 603  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  7609 taatttccctcgctaattttgctttttctagtagtatatg 7648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 461 - 596
Target Start/End: Original strand, 7457 - 7592
Alignment:
Q  461 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 560  Q
    |||||||||| ||||||| ||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  7457 taatgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgt 7556  T
Q  561 cactaattttcctcgctaattttgctttttctagta 596  Q
    ||||||||||||||| ||||||| ||||||||||||    
T  7557 cactaattttcctcgttaattttactttttctagta 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 93; Significance: 8e-45; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 472 - 600
Target Start/End: Complemental strand, 15117 - 14989
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||||| |    
T  15117 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaatttcc 15018  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||||||||||||||||||||    
T  15017 ctcgctaattttgctttttctagtagtgt 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 39822 - 39701
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || | | |||||| ||||||||||||||||||| |||||||||| |||||||||    
T  39822 agggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttccatcactaatttccctcgctaa 39723  T
Q  580 ttttgctttttctagtagtgta 601  Q
    ||||||||||||||||||||||    
T  39722 ttttgctttttctagtagtgta 39701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 88; Significance: 8e-42; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 58586 - 58721
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||| || |||||||||||    
T  58586 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccgtcac 58685  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||||||||| |||||||||    
T  58686 aaatttccctccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 74676 - 74539
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||| || |||||||||||    
T  74676 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccgtcac 74577  T
Q  564 taattttcctcgctaattttgctttttctagtagtgta 601  Q
     ||||| |||| |||||||| ||||| |||||||||||    
T  74576 aaatttccctccctaattttacttttcctagtagtgta 74539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 86; Significance: 1e-40; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 474 - 595
Target Start/End: Complemental strand, 84799 - 84678
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  574 cgctaattttgctttttctagt 595  Q
    | ||||||||||||||||||||    
T  84699 cactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 121106 - 120987
Alignment:
Q  480 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 579  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||| | | |||||||| |||| ||||    
T  121106 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcataactaatttccctctctaa 121007  T
Q  580 ttttgctttttctagtagtg 599  Q
    |||| |||||| ||||||||    
T  121006 ttttactttttttagtagtg 120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 466 - 602
Target Start/End: Original strand, 6801 - 6937
Alignment:
Q  466 agggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcacta 565  Q
    ||||| ||||||| ||||||||||||||||  |||||||||||||||| |||||||||| || ||| |||||| || |||||||||||||||||||| ||    
T  6801 agggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaata 6900  T
Q  566 attttcctcgctaattttgctttttctagtagtgtat 602  Q
    |||| |||||||||||||||||||||||||| |||||    
T  6901 atttccctcgctaattttgctttttctagtaatgtat 6937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 464 - 600
Target Start/End: Original strand, 12657 - 12792
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||| |||| || |||||||||||||||||||||||||||||| |  |||||| |||||||||||||||||||||||||    
T  12657 tgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccgtcac 12755  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  12756 taatttccctcgctaattttgctttttcaagtagtgt 12792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 464 - 599
Target Start/End: Complemental strand, 37922 - 37787
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||||| |   |||||||||||||||| ||||||||||||||    
T  37922 tgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccgtcac 37823  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||| ||  |||||||||| ||||||||||||||    
T  37822 taatttcccctgctaattttgttttttctagtagtg 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 464 - 599
Target Start/End: Original strand, 10162 - 10297
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||||||||    
T  10162 tgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccgtcac 10261  T
Q  564 taattttcctcgctaattttgctttttctagtagtg 599  Q
     ||||| |||| |||||||||||||| |||| ||||    
T  10262 aaatttccctccctaattttgcttttcctagcagtg 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 83; Significance: 8e-39; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 468 - 599
Target Start/End: Original strand, 173452 - 173584
Alignment:
Q  468 ggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaa--tttgtgaggaatttcattttttccgtcacta 565  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| || |||  ||| |||| ||||||||||||||||||||||    
T  173452 ggatatttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcacta 173551  T
Q  566 attttcctcgctaattttgctttttctagtagtg 599  Q
    | |||||||||||||||||||||||||| |||||    
T  173552 a-tttcctcgctaattttgctttttctaatagtg 173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 83; Significance: 8e-39; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 474 - 600
Target Start/End: Original strand, 439977 - 440103
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 573  Q
    ||||| ||||||||  | ||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattcct 440076  T
Q  574 cgctaattttgctttttctagtagtgt 600  Q
     ||||||||| ||||||||||||||||    
T  440077 tgctaattttactttttctagtagtgt 440103  T

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Target: scaffold0035 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 468 - 596
Target Start/End: Complemental strand, 74849 - 74720
Alignment:
Q  468 ggatatttagtaagggaaaa-catgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaa 566  Q
    ||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||| |||| |  ||||||||||| |||||||||||||||||||||||    
T  74849 ggatatttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaa 74750  T
Q  567 ttttcctcgctaattttgctttttctagta 596  Q
    ||| ||| ||||||||||| ||||||||||    
T  74749 tttcccttgctaattttgccttttctagta 74720  T

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Target: scaffold0062 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 472 - 600
Target Start/End: Original strand, 43929 - 44057
Alignment:
Q  472 atttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttc 571  Q
    ||||||| ||||||||| | ||||   ||||||||||||| | ||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |    
T  43929 atttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttcc 44028  T
Q  572 ctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||| ||||||||||||||||    
T  44029 ctcgctaatttttctttttctagtagtgt 44057  T

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Target: scaffold0011 (Bit Score: 73; Significance: 7e-33; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 511 - 599
Target Start/End: Complemental strand, 17705 - 17617
Alignment:
Q  511 tcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 599  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

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Target: scaffold0655 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 464 - 600
Target Start/End: Complemental strand, 3295 - 3161
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||||  ||||||||| ||||||| ||| ||||||| |||||||||||||||||| | | ||||||||||||| || || |||||||||||    
T  3295 tgagggaaatttag--agggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcac 3198  T
Q  564 taattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||| |||| |||||||| ||||||||| ||||||    
T  3197 taatttccctccctaatttttctttttctattagtgt 3161  T

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Target: scaffold0502 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 464 - 589
Target Start/End: Original strand, 10896 - 11021
Alignment:
Q  464 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 563  Q
    ||||||| ||||| | ||| ||||||||||||  ||||||||||| |||||||||||||| ||| |||||||||||||||||||| || |||| ||||||    
T  10896 tgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcgtcac 10995  T
Q  564 taattttcctcgctaattttgctttt 589  Q
     ||||| | || ||||||||||||||    
T  10996 aaatttccttccctaattttgctttt 11021  T

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Target: scaffold0554 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 600
Target Start/End: Original strand, 9881 - 9950
Alignment:
Q  531 ggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgt 600  Q
    |||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  9881 ggaatttgtgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagtagtgt 9950  T

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Target: scaffold0284 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 1644 - 1548
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||| ||||||||| | ||||||||||  || ||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaatttt 1548  T

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Target: scaffold0114 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 36316 - 36412
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||| ||||||||||||||||||||||  || ||||||||||| ||| ||||||||| ||| | |||| |||||||||||||||||||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaatttt 36412  T

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Target: scaffold0211 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 19263 - 19167
Alignment:
Q  474 ttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttt 570  Q
    ||||| ||||| ||||||||||| ||||||||||  ||  |||||||||||||| ||| || || ||||  |||| ||||||||||||| |||||||    
T  19263 ttagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaatttt 19167  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 598
Target Start/End: Original strand, 34151 - 34284
Alignment:
Q  465 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 564  Q
    |||||| |||||  ||||||| | ||||||| ||||||||| |   |||||||| ||| |||| ||  |||||||||| ||||| ||||||||| ||| |    
T  34151 gagggaaatttacaaagggaacatatgaaatttctctctaactttctcactaaagtttacgaccaataaatttgtgagaaattttattttttccctcatt 34250  T
Q  565 aattttcctcgctaattttgctttttctagtagt 598  Q
    |||||  |||  | ||||||||||| ||| ||||    
T  34251 aatttcgctccttgattttgcttttcctaatagt 34284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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