View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5943-Insertion-5 (Length: 1030)

Name: NF5943-Insertion-5
Description: NF5943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5943-Insertion-5
NF5943-Insertion-5
[»] chr6 (50 HSPs)
chr6 (8-1011)||(17233705-17234711)
chr6 (8-275)||(13195172-13195443)
chr6 (8-275)||(33665642-33665913)
chr6 (8-275)||(17855043-17855314)
chr6 (94-275)||(25948377-25948558)
chr6 (8-275)||(9281748-9282019)
chr6 (8-276)||(14258758-14259030)
chr6 (8-275)||(20989805-20990075)
chr6 (46-275)||(15897751-15897984)
chr6 (23-275)||(12039736-12039992)
chr6 (23-275)||(25805302-25805558)
chr6 (8-275)||(20558151-20558421)
chr6 (8-198)||(21706389-21706583)
chr6 (78-272)||(8465781-8465975)
chr6 (8-187)||(17527924-17528107)
chr6 (67-276)||(25782658-25782868)
chr6 (23-177)||(20470257-20470415)
chr6 (23-182)||(23882748-23882912)
chr6 (23-182)||(29254970-29255132)
chr6 (122-276)||(21717702-21717856)
chr6 (122-276)||(21725538-21725692)
chr6 (67-173)||(26965673-26965779)
chr6 (23-136)||(17864479-17864596)
chr6 (184-275)||(13870515-13870606)
chr6 (91-173)||(17869944-17870026)
chr6 (91-173)||(17879696-17879778)
chr6 (8-106)||(15003202-15003304)
chr6 (9-158)||(34657192-34657344)
chr6 (8-116)||(21723448-21723560)
chr6 (35-136)||(24501812-24501917)
chr6 (35-141)||(16137648-16137757)
chr6 (8-105)||(9384632-9384733)
chr6 (35-138)||(15038334-15038440)
chr6 (101-173)||(12385261-12385333)
chr6 (69-133)||(30424926-30424990)
chr6 (8-96)||(25964722-25964814)
chr6 (8-96)||(25969369-25969461)
chr6 (8-96)||(25973809-25973901)
chr6 (8-91)||(19215985-19216072)
chr6 (8-106)||(15007376-15007477)
chr6 (8-106)||(20003154-20003256)
chr6 (45-137)||(12444796-12444891)
chr6 (16-92)||(13870413-13870493)
chr6 (201-272)||(19894749-19894820)
chr6 (23-106)||(16309412-16309498)
chr6 (67-133)||(18152808-18152874)
chr6 (67-127)||(20765096-20765156)
chr6 (231-275)||(17864678-17864722)
chr6 (8-87)||(19171452-19171535)
chr6 (8-66)||(19894660-19894718)
[»] chr1 (27 HSPs)
chr1 (8-275)||(4245884-4246155)
chr1 (8-275)||(26972439-26972709)
chr1 (17-262)||(14745830-14746079)
chr1 (8-275)||(13165246-13165514)
chr1 (23-277)||(11667916-11668173)
chr1 (67-224)||(20859644-20859801)
chr1 (35-187)||(1973250-1973406)
chr1 (23-170)||(17851426-17851577)
chr1 (23-224)||(20841318-20841523)
chr1 (45-181)||(23478010-23478151)
chr1 (147-275)||(9451990-9452117)
chr1 (67-133)||(17379724-17379790)
chr1 (67-173)||(41330903-41331009)
chr1 (23-169)||(12753016-12753166)
chr1 (8-106)||(17012020-17012122)
chr1 (8-106)||(33062403-33062505)
chr1 (67-134)||(18390206-18390273)
chr1 (68-133)||(17355933-17355998)
chr1 (67-173)||(10340258-10340364)
chr1 (8-107)||(40313263-40313365)
chr1 (67-137)||(15804212-15804282)
chr1 (23-169)||(17038203-17038351)
chr1 (45-106)||(45599405-45599470)
chr1 (67-134)||(8902055-8902122)
chr1 (67-133)||(8281911-8281977)
chr1 (67-117)||(51472194-51472244)
chr1 (67-100)||(50057545-50057578)
[»] chr3 (42 HSPs)
chr3 (8-275)||(13790528-13790799)
chr3 (8-275)||(15635912-15636183)
chr3 (8-275)||(17702256-17702526)
chr3 (14-275)||(24195373-24195637)
chr3 (14-275)||(1919281-1919545)
chr3 (36-277)||(19531950-19532195)
chr3 (8-276)||(44452328-44452600)
chr3 (8-276)||(23954596-23954870)
chr3 (23-275)||(295309-295565)
chr3 (8-179)||(18547593-18547768)
chr3 (23-189)||(28051071-28051241)
chr3 (8-275)||(20748203-20748472)
chr3 (23-275)||(19633736-19633991)
chr3 (35-275)||(18034961-18035206)
chr3 (23-275)||(18064259-18064518)
chr3 (467-627)||(1727103-1727263)
chr3 (35-209)||(13524747-13524924)
chr3 (8-100)||(8224863-8224959)
chr3 (23-136)||(6580920-6581037)
chr3 (45-136)||(17042829-17042924)
chr3 (69-137)||(15686261-15686329)
chr3 (35-154)||(9031447-9031569)
chr3 (68-135)||(14406732-14406799)
chr3 (446-563)||(15668911-15669028)
chr3 (35-103)||(9036728-9036800)
chr3 (7-136)||(11656010-11656142)
chr3 (67-137)||(11558420-11558489)
chr3 (67-137)||(11567689-11567758)
chr3 (94-191)||(17140434-17140532)
chr3 (67-125)||(31649690-31649747)
chr3 (23-177)||(13913739-13913895)
chr3 (69-125)||(3552317-3552373)
chr3 (67-138)||(286994-287065)
chr3 (67-134)||(980466-980533)
chr3 (389-488)||(13361287-13361386)
chr3 (24-96)||(18476957-18477033)
chr3 (45-104)||(8749059-8749122)
chr3 (23-105)||(7479191-7479276)
chr3 (67-135)||(3445107-3445174)
chr3 (67-117)||(21719027-21719076)
chr3 (69-106)||(13917861-13917897)
chr3 (67-100)||(20976091-20976124)
[»] chr2 (24 HSPs)
chr2 (8-275)||(23758474-23758745)
chr2 (8-275)||(24790198-24790469)
chr2 (8-275)||(12910338-12910609)
chr2 (8-275)||(22610741-22611012)
chr2 (8-226)||(36398834-36399056)
chr2 (35-138)||(19466589-19466696)
chr2 (14-106)||(18765693-18765789)
chr2 (8-100)||(26860336-26860432)
chr2 (70-174)||(21250302-21250407)
chr2 (45-177)||(21530331-21530468)
chr2 (67-166)||(24317912-24318012)
chr2 (8-105)||(29566031-29566130)
chr2 (67-134)||(12952462-12952529)
chr2 (67-133)||(31587467-31587532)
chr2 (67-120)||(25347197-25347250)
chr2 (67-135)||(20649659-20649727)
chr2 (67-122)||(19198381-19198435)
chr2 (67-133)||(27111071-27111136)
chr2 (17-107)||(15328325-15328419)
chr2 (71-124)||(24283635-24283688)
chr2 (67-173)||(22582363-22582470)
chr2 (8-97)||(13315006-13315098)
chr2 (67-135)||(20475378-20475446)
chr2 (466-552)||(26444126-26444212)
[»] chr5 (28 HSPs)
chr5 (8-275)||(22404801-22405072)
chr5 (8-275)||(25105460-25105732)
chr5 (8-275)||(25164553-25164825)
chr5 (8-275)||(24189712-24189982)
chr5 (8-227)||(23420601-23420824)
chr5 (8-189)||(13735013-13735198)
chr5 (67-276)||(9422570-9422779)
chr5 (23-190)||(26036744-26036915)
chr5 (23-178)||(30605745-30605903)
chr5 (23-189)||(26329268-26329438)
chr5 (23-173)||(13338543-13338696)
chr5 (8-189)||(20845834-20846018)
chr5 (35-170)||(23623831-23623970)
chr5 (45-155)||(18221079-18221193)
chr5 (8-106)||(20498193-20498295)
chr5 (14-106)||(26183280-26183376)
chr5 (8-106)||(7897955-7898056)
chr5 (67-174)||(13942100-13942207)
chr5 (67-138)||(20714839-20714910)
chr5 (67-137)||(17661513-17661583)
chr5 (8-91)||(22246391-22246478)
chr5 (67-133)||(24117586-24117652)
chr5 (8-106)||(17920824-17920925)
chr5 (67-106)||(11204739-11204778)
chr5 (23-106)||(20740991-20741078)
chr5 (23-169)||(22130889-22131037)
chr5 (8-85)||(22252081-22252162)
chr5 (67-133)||(22979736-22979801)
[»] scaffold0103 (1 HSPs)
scaffold0103 (8-275)||(25713-25984)
[»] chr7 (55 HSPs)
chr7 (8-275)||(11521449-11521719)
chr7 (14-273)||(16207926-16208189)
chr7 (8-273)||(11588315-11588584)
chr7 (8-272)||(644985-645253)
chr7 (8-275)||(11998728-11998999)
chr7 (8-275)||(4458588-4458859)
chr7 (23-189)||(20991476-20991647)
chr7 (18-275)||(14165015-14165275)
chr7 (8-276)||(13455151-13455422)
chr7 (45-189)||(16436709-16436857)
chr7 (294-564)||(20093879-20094147)
chr7 (23-275)||(29546191-29546439)
chr7 (35-177)||(10279761-10279907)
chr7 (67-169)||(26133016-26133118)
chr7 (26-175)||(14926596-14926749)
chr7 (26-175)||(15350062-15350215)
chr7 (23-136)||(42636235-42636352)
chr7 (8-138)||(3290723-3290856)
chr7 (23-136)||(10658371-10658488)
chr7 (67-134)||(7586632-7586698)
chr7 (15-275)||(12325674-12325926)
chr7 (8-106)||(42782773-42782875)
chr7 (8-106)||(48797658-48797759)
chr7 (67-173)||(24902059-24902163)
chr7 (8-100)||(30226109-30226205)
chr7 (14-106)||(14984689-14984784)
chr7 (14-106)||(15414300-15414395)
chr7 (67-134)||(23057196-23057263)
chr7 (8-106)||(15436066-15436168)
chr7 (23-173)||(20925155-20925305)
chr7 (67-135)||(31269156-31269224)
chr7 (71-134)||(20596930-20596993)
chr7 (23-106)||(4794643-4794729)
chr7 (67-133)||(7508426-7508492)
chr7 (67-125)||(9894168-9894226)
chr7 (71-133)||(10251431-10251493)
chr7 (67-133)||(23082875-23082941)
chr7 (8-106)||(11628657-11628759)
chr7 (8-106)||(15506285-15506387)
chr7 (74-134)||(11407058-11407118)
chr7 (69-136)||(21260503-21260570)
chr7 (67-170)||(23956831-23956934)
chr7 (35-106)||(11560571-11560646)
chr7 (45-106)||(7620098-7620163)
chr7 (67-106)||(2076523-2076562)
chr7 (67-106)||(2082942-2082981)
chr7 (67-126)||(10309591-10309650)
chr7 (71-134)||(20588813-20588875)
chr7 (67-133)||(14687358-14687424)
chr7 (68-169)||(9566861-9566960)
chr7 (67-133)||(6045312-6045377)
chr7 (67-133)||(19353122-19353187)
chr7 (67-97)||(24813952-24813982)
chr7 (67-96)||(5299175-5299204)
chr7 (67-96)||(23174982-23175011)
[»] chr4 (34 HSPs)
chr4 (17-275)||(10190735-10190997)
chr4 (8-275)||(25116672-25116945)
chr4 (8-275)||(16383738-16384010)
chr4 (8-275)||(23400234-23400499)
chr4 (14-227)||(28019200-28019418)
chr4 (45-275)||(15162564-15162798)
chr4 (8-169)||(33899028-33899193)
chr4 (35-275)||(10724108-10724352)
chr4 (35-275)||(10937877-10938121)
chr4 (8-275)||(21477957-21478227)
chr4 (14-181)||(18618162-18618334)
chr4 (531-664)||(11450873-11451006)
chr4 (531-664)||(11543729-11543862)
chr4 (115-275)||(8163631-8163791)
chr4 (23-155)||(15700365-15700502)
chr4 (24-138)||(13399359-13399477)
chr4 (8-130)||(19659432-19659558)
chr4 (23-136)||(9068933-9069050)
chr4 (8-106)||(11325185-11325287)
chr4 (184-273)||(33899402-33899491)
chr4 (67-134)||(33737973-33738040)
chr4 (67-173)||(41785385-41785491)
chr4 (8-106)||(25354676-25354777)
chr4 (8-106)||(46741790-46741891)
chr4 (67-134)||(32861637-32861704)
chr4 (35-106)||(22554987-22555062)
chr4 (35-106)||(23541261-23541336)
chr4 (8-106)||(24143152-24143253)
chr4 (23-169)||(33745918-33746068)
chr4 (67-135)||(50907840-50907908)
chr4 (67-134)||(2679839-2679906)
chr4 (68-133)||(10198354-10198418)
chr4 (67-100)||(13268870-13268903)
chr4 (67-112)||(16655441-16655486)
[»] scaffold0059 (2 HSPs)
scaffold0059 (8-273)||(50131-50401)
scaffold0059 (8-275)||(61513-61784)
[»] scaffold0185 (1 HSPs)
scaffold0185 (8-276)||(2398-2670)
[»] scaffold0037 (1 HSPs)
scaffold0037 (8-275)||(110296-110568)
[»] scaffold0102 (1 HSPs)
scaffold0102 (8-276)||(36853-37125)
[»] chr8 (26 HSPs)
chr8 (8-275)||(23541450-23541722)
chr8 (23-276)||(11221326-11221578)
chr8 (23-273)||(33976909-33977163)
chr8 (67-191)||(45133597-45133721)
chr8 (8-275)||(25240254-25240525)
chr8 (110-275)||(22472631-22472798)
chr8 (120-275)||(27925578-27925733)
chr8 (14-178)||(22485089-22485247)
chr8 (23-155)||(24091926-24092062)
chr8 (71-190)||(33961695-33961814)
chr8 (8-114)||(22476240-22476350)
chr8 (8-106)||(37155565-37155667)
chr8 (67-133)||(12814694-12814760)
chr8 (35-169)||(9996454-9996592)
chr8 (67-135)||(1562469-1562537)
chr8 (45-106)||(39080983-39081048)
chr8 (35-106)||(8726862-8726937)
chr8 (67-173)||(20254985-20255091)
chr8 (186-275)||(22480934-22481023)
chr8 (8-106)||(33466200-33466301)
chr8 (70-134)||(12240228-12240292)
chr8 (67-118)||(24384567-24384618)
chr8 (8-106)||(17279906-17280007)
chr8 (14-106)||(17880785-17880881)
chr8 (67-106)||(23249752-23249791)
chr8 (35-96)||(22874206-22874271)
[»] scaffold0333 (1 HSPs)
scaffold0333 (12-275)||(5493-5761)
[»] scaffold0006 (1 HSPs)
scaffold0006 (8-211)||(87648-87855)
[»] scaffold0226 (3 HSPs)
scaffold0226 (45-274)||(7616-7849)
scaffold0226 (35-276)||(18192-18436)
scaffold0226 (35-276)||(27586-27830)
[»] scaffold0259 (1 HSPs)
scaffold0259 (45-273)||(17354-17586)
[»] scaffold0190 (1 HSPs)
scaffold0190 (8-211)||(16664-16871)
[»] scaffold0008 (1 HSPs)
scaffold0008 (8-172)||(40287-40454)
[»] scaffold0003 (1 HSPs)
scaffold0003 (45-189)||(26339-26487)
[»] scaffold0338 (1 HSPs)
scaffold0338 (8-275)||(16253-16524)
[»] scaffold0088 (1 HSPs)
scaffold0088 (8-118)||(36598-36712)
[»] scaffold0032 (1 HSPs)
scaffold0032 (29-106)||(103123-103204)
[»] scaffold0064 (1 HSPs)
scaffold0064 (23-106)||(52980-53066)
[»] scaffold0143 (1 HSPs)
scaffold0143 (8-106)||(36315-36416)
[»] scaffold0022 (1 HSPs)
scaffold0022 (67-136)||(3111-3179)
[»] scaffold0423 (1 HSPs)
scaffold0423 (72-135)||(13596-13659)
[»] scaffold0015 (1 HSPs)
scaffold0015 (67-133)||(202386-202452)
[»] scaffold0328 (1 HSPs)
scaffold0328 (14-90)||(17018-17098)
[»] scaffold0505 (1 HSPs)
scaffold0505 (67-133)||(10138-10204)
[»] scaffold0520 (1 HSPs)
scaffold0520 (67-133)||(5409-5475)
[»] scaffold0035 (1 HSPs)
scaffold0035 (67-133)||(37357-37422)


Alignment Details
Target: chr6 (Bit Score: 743; Significance: 0; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 743; E-Value: 0
Query Start/End: Original strand, 8 - 1011
Target Start/End: Complemental strand, 17234711 - 17233705
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagta 103  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||     |||||||||||||  |||||||||||||| ||||||    
T  17234711 aggtcataggtcatatagtgtaaacagggagtttgcagagagctattgaataaggactacactggtggatttccttctgggcttggtagcccctagagta 17234612  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||||||||||||  |||    
T  17234611 ggtgtgtttgtcaccaaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttatttttatttctatttatcacgtgatgttga 17234512  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcaggaacctaagaaactaattatacaaaat 303  Q
    || ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17234511 aatattaatcgtaacattgcaaatgccgaaacatcatacataatatattaaaacaagtgtgctagaatttcaggaacctaagaaactaattatacaaaat 17234412  T
Q  304 gaaattcgcataatgagaaatgaaatattggagaaaggtcagctttcatatactcagaagaaaattgatagacctttaaacaagtatgataattctctta 403  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17234411 gaaattcgcataatgagaaatgaaattttggagaaaggtcagctttcatatactcagaagaaaattgatagacttttaaacaagtatgataattctctta 17234312  T
Q  404 aggagtttatcattcatagcatttacagaagcatgctagcttcaatgatttatggtttcagcagaaacaagggagaaggaattagtttctcaaaagaagc 503  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||    
T  17234311 aggagtttgtcattcatagcatttacagaagcatgctagcttcaatgatttatggttttagcagaaacaacggagaaggaattggtttcttaaaagaagc 17234212  T
Q  504 acctcttaagacaatgcaaaatctagagaaatcaaagaaacctccttgttatgagtgtatacaaaacagtatgtattcctactttgttccaaaagctgga 603  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17234211 acctcttaagacgatgcaaaatctagagaaatcaaagaaacctccttgttatgagtgtatacagaacaatatgtattcctactttgttccaaaagctgga 17234112  T
Q  604 aaagctaaggttctgaacaagtcataatctatgaacttagagtcgaaggttctgatcaaatagagaccaaagggtctgtccatatttactgttgaattgc 703  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  17234111 aaaactaaggttctgaacaagtcataatctatgaacttagagtcaaaggttctgatcaaatagagaccaaagggtatgtccatatttactgttcaattgc 17234012  T
Q  704 aaaactagaaacatgttttttgtatttagacttgccaattgggtcaaattctcgccggttacaatttttgtacccactacttgaccgaattnnnnnnnnn 803  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||             
T  17234011 aaaactagaaacatgttttttgtatttaggcttgccaattgggtcaaattctcgtcggttacgattttggtacccactacttgaccgaatt-aaaaaaaa 17233913  T
Q  804 nncaacttgaggtggac-agtcgatatttatcaatgcgggtcgtcttgttctcttgaagtgtatcgtttcttatttgcaagacttcaaggctctcacatg 902  Q
      ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17233912 aacaacttgaggtggacaagtcgatatttatcaatgggggttgtcttgttctcttgaagtgtatcgtttcttatttgccagacttcaaggctctcacatg 17233813  T
Q  903 tatcatatattctatttaatctatttttaaacgtttatttcaatggggagggggagcaaattagggaaaataagtgggattaaataggaaac-atttact 1001  Q
    |||||| |||||| |||||||||||||||||||||||||||   ||||| ||| || |||||| ||||||||||| |||||||||||||||| |||||||    
T  17233812 tatcatctattctttttaatctatttttaaacgtttatttcggagggga-gggcaggaaatta-ggaaaataagttggattaaataggaaacaatttact 17233715  T
Q  1002 cagaaaagga 1011  Q
    ||||||||||    
T  17233714 cagaaaagga 17233705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 13195443 - 13195172
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||||||    |||||||||||||| ||||||||||||||| ||||||    
T  13195443 aggtcctaggtcatatagtgtaaacgaggagttttctgagagctattgaataaggactacactagtggatttccttcatggcttggtagcccctagagta 13195344  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||| | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  |||    
T  13195343 ggtgtgtttgtcatcgaactaggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgtttttatttatgtttattgcgtgatgttga 13195244  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||| |||||||||||||| |  |||||||||||  || ||||||||||| ||||||||||||||||    
T  13195243 aacattaattgtaacattgcaaacgctaaaacatcataccaaacatattaaaacacgtgtgctagaatttca 13195172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 33665913 - 33665642
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| || ||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||| |||||||||||||||    
T  33665913 aggtcctatgtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttagtagcccccagagta 33665814  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| ||||||||  |||||  | |    
T  33665813 ggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttatttactttcctatcatttattttcttgtttttatttctgtttatcgtgtgatgttaa 33665714  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||| ||||||||||||    
T  33665713 aacattaatcgtaacattgcaaacaccgtaacatcatacagaacatattaaaacaagtgcgctagaatttca 33665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 17855314 - 17855043
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||| ||||| ||||||||    
T  17855314 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttgatagcctccagagta 17855215  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | ||||||  |||||  |||    
T  17855214 ggtgtgtttgtcaccgatctgggtcaacaaactcattgcgttctttactttcctgtcttttattttcttgtttttaattctatttatcgtgtgatgttga 17855115  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||||||| |||||     |||||||||||| ||  |||||||||||||||||||||||||||    
T  17855114 aacattaatcgtaacatcgcaaatattaaaacatcatacaaaacgtattaaaacaagtgtgctagaatttca 17855043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 94 - 275
Target Start/End: Complemental strand, 25948558 - 25948377
Alignment:
Q  94 ccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcac 193  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  25948558 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgtttttatttctgtttatcgc 25948459  T
Q  194 gtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||  |||||||||||||||| |||||||||| | |||||| |||||||||| |||||||||||||||||||||||||||    
T  25948458 gtgatgttgaaacattaatcgtatcattgcaaacgctgaaacaacatacataatgtattaaaacaagtgtgctagaatttca 25948377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 9281748 - 9282019
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||||||    
T  9281748 aggtcttaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttccaggcttggtagcccccagagta 9281847  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||| | ||||||||||||||| |||| ||||||| ||||| |||||||  |||||||||||| |||||||| | ||||  ||     
T  9281848 ggtgtgtttgtcaccgaactagatcaacaaactcattgtgttcattacttttctgtcttttatttaattgtttttatttctgtttatcgcttgatgttgg 9281947  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||| | | |||||||| |||||   |||||||||||||||  |||||||||||||| ||||||||||||    
T  9281948 aacattgaacttaacattgaaaactttaaaacatcatacataacgtattaaaacaagtgcgctagaatttca 9282019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 14259030 - 14258758
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||||| |||||||    |||||   ||||||||||||||||||||||    |||||||||||||||| ||||||||||||||| ||||    
T  14259030 aggtcctaggtcatatattgtaaacgataagtttgttgagagctattgaataaggactacactagtggatttccttcctcgcttggtagcccccaaagta 14258931  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||||| || ||||| ||||||  |||    
T  14258930 ggtgtgtttctcaccgaactgggtcaacaaactcattgtgttctttactttcctattgtttattttcttgtttttatttctgcttatcgcgtgatgttga 14258831  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
    ||||||||||||||||||||||||    |||||||||| | || ||||||||||||||| | || ||||||||    
T  14258830 aacattaatcgtaacattgcaaacgttaaaacatcataaaaaacatattaaaacaagtgcgttaaaatttcag 14258758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 20989805 - 20990075
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    |||||||||||| | || |||||||  ||||||| | ||||||||| ||||||||||||    ||||||||||||| ||| |||||||||||||||||||    
T  20989805 aggtcataggtctt-taatgtaaacgaggagtttgctgagagctatagaataaggactacactagtggatttcctttctgacttggtagcccccagagta 20989903  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||| ||||||| |||||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||| |  |||||  |||||  ||     
T  20989904 ggtgtgtctgtcaccgaactgggtcaacaaactcattgtgttatttactttcccatcatttattttcttgtttttatttctacttatcgtgtgatgttgg 20990003  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||| |||| |||||||||||  |  |||||||||||| || ||||||||||||||| ||||||||||||    
T  20990004 aacattgatcggaacattgcaaatgctaaaacatcatacagaacatattaaaacaagtgagctagaatttca 20990075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 46 - 275
Target Start/End: Original strand, 15897751 - 15897984
Alignment:
Q  46 agagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattg 141  Q
    |||||||| ||||||||||||    |||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||     
T  15897751 agagctatagaataaggactacactagtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattt 15897850  T
Q  142 cgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcata 241  Q
     ||||||||||||| |||| ||||||||||| |||||| || |||||||| ||||||  |||||| || | |  ||||||||| ||    ||||||| ||    
T  15897851 tgttctttactttcttgtcttttattttcttatttttacttctgtttatcgcgtgatgttgaaaccttgaacaaaacattgcatacgttaaaacatcgta 15897950  T
Q  242 cataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||| ||||||||||||||||| ||||||||||    
T  15897951 cataacatattaaaacaagtgtgttagaatttca 15897984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 12039736 - 12039992
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  |||||||   ||||||||| ||||||||||||    ||  |||||||||||| ||||||||||||||| ||||||| |||| ||||||    
T  12039736 tagtgtaaacgaggagtttgttgagagctatagaataaggactacactagaagatttccttcctagcttggtagcccccaaagtaggtgtgttcgtcacc 12039835  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     |||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||| || |||||| | || |||    
T  12039836 gaactaggtcaacaaactcattgtgttctttactttcttgtcgtttattttcttgtttttatttctgtttatctcgtgatattggaacattgaacgaaac 12039935  T
Q  219 attgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||    ||||||| |  | || ||||||||||||||||||||||||||||    
T  12039936 attgcaaacgttaaaacatcgtgtagaacatattaaaacaagtgtgctagaatttca 12039992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 23 - 275
Target Start/End: Complemental strand, 25805558 - 25805302
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | |||||||||  |||||||||||    |||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  25805558 tagtgtaaacgaggagtttgctgagagctatataataaggactacactagtggatttccttcctggcttggtagcctctagagtaggtgtgtttgtcacc 25805459  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     | |||| | |||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||| | |||  ||||||||| | || |||    
T  25805458 gatctggtttaacaaaatcattgtgttctttactttcctgtcatttactttcttgtttttatttctttttatcaagcgatgttgaaacattgaacgaaac 25805359  T
Q  219 attgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||  |||| |  |||||||||||| || ||||||||||||||| | ||||||||||    
T  25805358 attataaacgcttaaacatcatacagaacatattaaaacaagtgcgatagaatttca 25805302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 20558421 - 20558151
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||| | | |||||||| |||    |||||||||||||||||||||||||||| ||||| ||    
T  20558421 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagttttagaataagggctacactagtggatttccttcctggcttggtagcctccagacta 20558322  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    |||    ||| |||| |||||||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||  ||     
T  20558321 ggtgacgttg-caccgaactgggttaacaaactcactgtgttctttactttcttgtcatttattttcttgtttttatttctgtttatcgcgtgatgttgg 20558223  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||| | |||||||| ||||||    ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  20558222 aacattgaacgtaacatcgcaaacgttaaaacatcatacataacatattaaaacaagtgcgctcgaatttca 20558151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 21706389 - 21706583
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga-gt 102  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||| |||||| ||| || ||||||| || ||    
T  21706389 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggattttcttcctagctagg-agcccccggacgt 21706487  T
Q  103 aggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgat 198  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  21706488 aggtgtgtttgtcaccaaactgggttaacaaactcattgtgttctttactttcctgtcgattattttcttgtttttatttatgtttatcacttgat 21706583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 78 - 272
Target Start/End: Original strand, 8465781 - 8465975
Alignment:
Q  78 ttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttt 177  Q
    |||||||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  8465781 ttcctggcttggcagcccccagagtaggtgtgtttgtcaccgaaatgggtcaacaaactcattgtgttctttactttcctgtcatttactttcttgtttt 8465880  T
Q  178 tatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatt 272  Q
    |||||  ||||||  ||||||  || |||||| | || ||||||||||||    |||||||||| | || ||||||||||||||| |||||||||    
T  8465881 tatttcagtttatttcgtgatgttggaacattgaacggaacattgcaaacgttaaaacatcatatagaacatattaaaacaagtgcgctagaatt 8465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 17527924 - 17528107
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||| ||||||| | |||| |||||||||||||||||    ||||||||  ||| |||||||||||||||| | ||||    
T  17527924 aggtcctaggtcatatagtgtaaacaaggagtttgctgagaactattgaataaggactacactagtggattaactttctggcttggtagccccaatagta 17528023  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtt 187  Q
    ||| ||||||||||  |||||||| |||||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||    
T  17528024 ggtgtgtttgtcactgaactgggttaacaaactcactgtgttctttactttcctgtcttttattttcttgtttttatttctgtt 17528107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 67 - 276
Target Start/End: Complemental strand, 25782868 - 25782658
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattg-cgttctttactttcctgtcattta 165  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||| ||  |||||| | ||||||||||||||    
T  25782868 agtggatttccttactggcttggtagcctccagagtaggtgtgtttgtcaccgaactgggttaacaaactcactgttgttcttaaatttcctgtcattta 25782769  T
Q  166 ttttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgc 265  Q
     |||||||||||||||| |||||||| || |||  |||| |||| |  | |||||| ||||  |  ||||||| ||||||| ||||||||||||||| ||    
T  25782768 ctttcttgtttttatttctgtttatctcgcgatgttgaagcattgaatgaaacattacaaatgcttaaacatcgtacataacatattaaaacaagtgcgc 25782669  T
Q  266 tagaatttcag 276  Q
    |||||||||||    
T  25782668 tagaatttcag 25782658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 20470257 - 20470415
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||| ||    |||||||||||||||||||||||||||| ||||||||||| || ||||| ||    
T  20470257 tagtgtaaacgaggagtttgctgagagctatagaataaggagtacactagtggatttccttcctggcttggtagcctccagagtaggtgtgattgtcgcc 20470356  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttt 177  Q
     |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  20470357 gaactgggtcaacaaactcattatgttctttactttcctgtcatttattttcttgtttt 20470415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 23882748 - 23882912
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    |||||||||||  |||||| | | ||||||| |||||| |||||    |||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  23882748 tagtgtaaacaaagagtttgctgggagctatagaataaagactacactagtggatttccttcctgatttggtagcccccagagtaggtgtgtttgtcacc 23882847  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg-tttttattt 182  Q
     |||||||||||||||||||||| ||||||||||||| |||||||||||||| || |||||||||    
T  23882848 gaactgggtcaacaaactcattgtgttctttactttcgtgtcatttattttcatgctttttattt 23882912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 29254970 - 29255132
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    ||||||||| |||||||||||| ||||||  ||||||||| |||||| |||     
T  29254970 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggattttcttcctggcttgatagccct-agagtaggtgtgtttgccact 29255068  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttattt 182  Q
     |||||||||||||||||||  | ||||||||||||| ||||||||| ||||||||||||||||    
T  29255069 gaactgggtcaacaaactcaccgtgttctttactttcttgtcatttactttcttgtttttattt 29255132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 122 - 276
Target Start/End: Original strand, 21717702 - 21717856
Alignment:
Q  122 ctgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacatt 221  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||  || |||||||| || ||||||    
T  21717702 ctgggtcaacaaactcattgtgttctttactttccagtcgtttattttcttgattttatttctgtttatcacgtgatgttggaacattaaacggaacatt 21717801  T
Q  222 gcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
    ||||||    |||||||  ||| ||| || |||||||||   |||||||||||||    
T  21717802 gcaaacattaaaacatctgacagaatttaataaaacaagaacgctagaatttcag 21717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 122 - 276
Target Start/End: Original strand, 21725538 - 21725692
Alignment:
Q  122 ctgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacatt 221  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||  || |||||||| || ||||||    
T  21725538 ctgggtcaacaaactcattgtgttctttactttccagtcgtttattttcttgattttatttctgtttatcacgtgatgttggaacattaaacggaacatt 21725637  T
Q  222 gcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
    ||||||    |||||||  ||| ||| || |||||||||   |||||||||||||    
T  21725638 gcaaacattaaaacatctgacagaatttaataaaacaagaacgctagaatttcag 21725692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 26965673 - 26965779
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    ||||||||||||||||| |||| ||||| ||||||||||| ||||||||||| |||||||||||||||||  ||| |   ||||||||| ||||||||||    
T  26965673 agtggatttccttcctgacttgatagcctccagagtaggtgtgtttgtcaccgaactgggtcaacaaactgtttgtgccttttactttcttgtcatttat 26965772  T
Q  167 tttcttg 173  Q
    |||||||    
T  26965773 tttcttg 26965779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 17864479 - 17864596
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    ||||||||| |||||||| |||||| |||||||||||||| |||||||||||    
T  17864479 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggattttcttcctggattggtaacccccagagtaggtgtgtttgtcacc 17864578  T
Q  119 aaactgggtcaacaaact 136  Q
     |||| ||||||||||||    
T  17864579 gaactaggtcaacaaact 17864596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 13870515 - 13870606
Alignment:
Q  184 tgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||| ||||||  ||||||||||||||||||||||||||| | |||||||||| || || ||||||||||||||| ||||||||||||    
T  13870515 tgtttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgctgaaacatcattcagaacatattaaaacaagtgcgctagaatttca 13870606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 17869944 - 17870026
Alignment:
Q  91 agcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg 173  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||| || || |||||||||| |||||||||||||||||    
T  17869944 agcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgtcctttactttcttgtcatttattttcttg 17870026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 17879696 - 17879778
Alignment:
Q  91 agcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg 173  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||| || || |||||||||| |||||||||||||||||    
T  17879696 agcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgtcctttactttcttgtcatttattttcttg 17879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 15003202 - 15003304
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||| ||||||| | ||||||||||||||||||||||    |||||||||||||| |||||||||| || ||||||||    
T  15003202 aggtcctaggtcatatagtgcaaacaaggagtttgctgagagctattgaataaggactacactagtggatttccttcatggcttggtatccaccagagta 15003301  T
Q  104 ggt 106  Q
    |||    
T  15003302 ggt 15003304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 34657192 - 34657344
Alignment:
Q  9 ggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga-gta 103  Q
    |||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||| ||||||||||||||| ||| |||    
T  34657192 ggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcttggcttggtagcccctagatgta 34657291  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctg 158  Q
    |||  | ||||  || |||||||| |||||||||  || ||||||||||||||||    
T  34657292 ggtgag-ttgt-gccgaactgggttaacaaactctctgtgttctttactttcctg 34657344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 21723448 - 21723560
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga-gt 102  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||| ||    
T  21723448 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttgg-agcccccagacgt 21723546  T
Q  103 aggtatgtttgtca 116  Q
    |||| | |||||||    
T  21723547 aggtgtatttgtca 21723560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 24501917 - 24501812
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||| ||||||||||||    ||||||||||||| |||||||||||||| | ||||||||| ||||||||||| |||||||| ||    
T  24501917 ggagtttgctgagagctatagaataaggactacactagtggatttcctttctggcttggtagcctctagagtaggtgtgtttgtcaccgaactgggttaa 24501818  T
Q  131 caaact 136  Q
    ||||||    
T  24501817 caaact 24501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 16137648 - 16137757
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||    ||| || |||||||||| ||    
T  16137648 ggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagccctcagagtaggtgacgttg-catcaaactgggttaa 16137746  T
Q  131 caaactcattg 141  Q
    |||||||||||    
T  16137747 caaactcattg 16137757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 9384733 - 9384632
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||| |||||||||| ||||| ||    
T  9384733 aggtcctaggtcatatagtgcaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctgacttggtagccaccagaata 9384634  T
Q  104 gg 105  Q
    ||    
T  9384633 gg 9384632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 15038440 - 15038334
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||||||||||    ||| ||||||||||||| ||    
T  15038440 ggagtttcctgagagctattgaatacggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttg-caccaaactgggttaa 15038342  T
Q  131 caaactca 138  Q
    ||||||||    
T  15038341 caaactca 15038334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 12385261 - 12385333
Alignment:
Q  101 gtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg 173  Q
    |||||| ||||||||| | ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||    
T  12385261 gtaggtgtgtttgtcatcgaactgggccaacaaactcactgtgttctttactttcttgtcatttattttcttg 12385333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 30424990 - 30424926
Alignment:
Q  69 tggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||| |||||||    
T  30424990 tggatttccttcttggcttggtagcccctagagtaggtgtgtttgtcaccgaactggttcaacaa 30424926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 25964814 - 25964722
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccc 96  Q
    ||||| |||||||||||||||||||   ||||||||  || ||||| ||||||||||||    ||||||||||||||||||||||||||||||    
T  25964814 aggtcctaggtcatatagtgtaaacgatgagttttctaagggctatagaataaggactaccctagtggatttccttcctggcttggtagcccc 25964722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 25969461 - 25969369
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccc 96  Q
    ||||| |||||||||||||||||||   ||||||||  || ||||| ||||||||||||    ||||||||||||||||||||||||||||||    
T  25969461 aggtcctaggtcatatagtgtaaacgatgagttttctaagggctatagaataaggactaccctagtggatttccttcctggcttggtagcccc 25969369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 25973901 - 25973809
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccc 96  Q
    ||||| |||||||||||||||||||   ||||||||  || ||||| ||||||||||||    ||||||||||||||||||||||||||||||    
T  25973901 aggtcctaggtcatatagtgtaaacgatgagttttctaagggctatagaataaggactaccctagtggatttccttcctggcttggtagcccc 25973809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 19216072 - 19215985
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggta 91  Q
    ||||| |||||||||||||| ||||  ||||||| | ||||||||||||||| ||||||    |||||||||||||||||||||||||    
T  19216072 aggtcctaggtcatatagtgaaaacgaggagtttgctgagagctattgaatacggactacactagtggatttccttcctggcttggta 19215985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 15007376 - 15007477
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| | ||||||||||||||||| ||||    |||||||||||||| ||||||||||  ||||||||||    
T  15007376 aggtcctaggtcatatagtgcaaacgaggagtttgctgagagctattgaataagtactacactagtggatttccttcatggcttggta-tccccagagta 15007474  T
Q  104 ggt 106  Q
    |||    
T  15007475 ggt 15007477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 20003256 - 20003154
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  || |||| | ||||||||||||||||| ||||    ||| |||||||||||||||||||||||||| | ||||    
T  20003256 aggtcctaggtcatatagtgcaaacgaggggtttcctgagagctattgaataagaactacactagttgatttccttcctggcttggtagcccctaaagta 20003157  T
Q  104 ggt 106  Q
    |||    
T  20003156 ggt 20003154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 12444796 - 12444891
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactc 137  Q
    ||||||| ||||||| ||||||    |||||| ||||||||| ||||||||||| ||||||||||| || |||||||| |||||||| |||||||||    
T  12444796 gagagcttttgaatacggactacactagtggagttccttcctagcttggtagcctccagagtaggtgtg-ttgtcaccgaactgggttaacaaactc 12444891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 13870413 - 13870493
Alignment:
Q  16 ggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtag 92  Q
    ||||||||||||||||||  ||| ||   ||||||||||||||||||||||    ||||||||||||||||||||||||||    
T  13870413 ggtcatatagtgtaaacaatgagcttgatgagagctattgaataaggactacactagtggatttccttcctggcttggtag 13870493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 19894749 - 19894820
Alignment:
Q  201 tgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatt 272  Q
    ||||||||||||||||| ||| |||||   | ||||||||||| || |||||||||||||||||||||||||    
T  19894749 tgaaacattaatcgtaatattacaaacgttgtaacatcatacagaacatattaaaacaagtgtgctagaatt 19894820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 16309412 - 16309498
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||||||  ||||||| | ||||||||  ||||||||||||    |||||||||||| |||||||||||||||||||||||||||    
T  16309412 tagtgtaaacgaggagtttgctgagagctagagaataaggactatactagtggatttcct-cctggcttggtagcccccagagtaggt 16309498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 18152808 - 18152874
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||||||||||| |||||||||| ||| ||||||| ||||||||||  |||||||| |||||    
T  18152808 agtggatttccttcctgccttggtagcctccatagtaggtgtgtttgtcactgaactgggttaacaa 18152874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 20765096 - 20765156
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggt 127  Q
    |||||| || |||||||||||||| |||||||||||| || ||||||||||| ||||||||    
T  20765096 agtggactttcttcctggcttggtcgcccccagagtaagtgtgtttgtcaccgaactgggt 20765156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 17864678 - 17864722
Alignment:
Q  231 gaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||    
T  17864678 gaaacatcttacataacatattaaaacaagtgcgctagaatttca 17864722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 19171535 - 19171452
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggctt 87  Q
    ||||| ||||||||||||| ||| || ||| ||| | ||||| ||||||||||||||||    |||||||||||||||| ||||    
T  19171535 aggtcctaggtcatatagtataagcaaggactttgctgagagttattgaataaggactacactagtggatttccttcctagctt 19171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 19894660 - 19894718
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta 66  Q
    ||||| ||||||||||| |||||||| ||| |||   ||||||||||||||||||||||    
T  19894660 aggtcctaggtcatataatgtaaacaaggaatttgatgagagctattgaataaggacta 19894718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 1e-93; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 4246155 - 4245884
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||| |||||||||||||||||||    
T  4246155 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctgtcttggtagcccccagagta 4246056  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||    
T  4246055 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgtttttatttctgcttatcgcgtgatgttga 4245956  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||| |||||||||||||  | ||||||||||||||| |||||||||||||||||||||| |||||    
T  4245955 aacattaatcataacattgcaaacgtcaaaacatcatacataacatattaaaacaagtgtgctagattttca 4245884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 26972439 - 26972709
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||||    
T  26972439 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttactggcttggtagcccccagagta 26972538  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||||| || |||||| ||||||||||||||||||||  |||||||| |  |||  |||    
T  26972539 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttaattacctgtcttttattttcttgtttttattactgtttatcgccggatgttga 26972638  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||||||| | ||||   | ||||||||||| || ||||||||||||||| ||||||||||||    
T  26972639 aacattaatcgtaacatcg-aaacgttgtaacatcatacagaacatattaaaacaagtgcgctagaatttca 26972709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 14745830 - 14746079
Alignment:
Q  17 gtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgttt 112  Q
    ||||||||||||||||  | ||||| | ||||||||||||||||||||||    ||||||||| |||||||||||||||||||||||||| ||| |||||    
T  14745830 gtcatatagtgtaaacgagtagtttgctgagagctattgaataaggactacactagtggattttcttcctggcttggtagcccccagagttggtgtgttt 14745929  T
Q  113 gtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaat 212  Q
    |||||| | ||||||||||||||||  || ||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||    
T  14745930 gtcaccgagctgggtcaacaaactcgctgtgttatttactttcctgtcatttattttcttgtttttgtttctgtttatcgcgtgatattgaaacattaat 14746029  T
Q  213 cgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtg 262  Q
    | ||||||||||||| |  |||||||||||||||  | ||||||||||||    
T  14746030 cttaacattgcaaacactaaaacatcatacataacctcttaaaacaagtg 14746079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 13165514 - 13165246
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||||| |||||||  ||||| | | ||||||||||||||||||||||    |||||||||||||||| ||||||||||||| | ||||    
T  13165514 aggtcctaggtcatatactgtaaacgaggagtatgctgagagctattgaataaggactacactagtggatttccttcctagcttggtagcccc-acagta 13165416  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    |||  |||||||||| ||||| ||||||||||| |||| ||||||||||||||| || |||||||||||||||||| || |||||||| ||||||  ||     
T  13165415 ggt--gtttgtcaccgaactgagtcaacaaacttattgtgttctttactttcctatcttttattttcttgtttttaattctgtttatcgcgtgatgttgt 13165318  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||| |||||| ||||||    |||||||||||| ||  |||||||||||||||||||||||||||    
T  13165317 aacattaatcataacatcgcaaacgttaaaacatcatacagaacgtattaaaacaagtgtgctagaatttca 13165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 23 - 277
Target Start/End: Original strand, 11667916 - 11668173
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    ||| |||||||||||||||||||||||||||||||||||| ||||| ||| |    
T  11667916 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtagatttccttcctggcttggtagcccccagagtaggtgtgtttctcatc 11668015  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     ||||||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||||    ||||  || |||||| | || |||    
T  11668016 gaactgggtcaacaaactcactgtgttctttactttcttttcatttattttcttgtttttatttatgtttattttttgatgttggaacattgaacggaac 11668115  T
Q  219 attgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcagg 277  Q
    |||| ||||   |||||||| |||| || ||||||||||||||| ||||||||||||||    
T  11668116 attgtaaacgttgaaacatcttaca-aacatattaaaacaagtgcgctagaatttcagg 11668173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 20859644 - 20859801
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||    
T  20859644 agtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaaatcattgtgttctttactttcttgtcgtttat 20859743  T
Q  167 tttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgca 224  Q
    ||||||||||||| ||  ||||||| ||||||  ||||||||| | || |||||||||    
T  20859744 tttcttgtttttactttcgtttatcgcgtgatgttgaaacattgaacgaaacattgca 20859801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 35 - 187
Target Start/End: Complemental strand, 1973406 - 1973250
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||||| ||||||||| ||||||||||||    ||||||||||||||||| ||||||| |||||||||||||  ||||||||||| |||||||||||    
T  1973406 ggagttttctgagagctatagaataaggactacactagtggatttccttcctgacttggtatcccccagagtaggagtgtttgtcaccgaactgggtcaa 1973307  T
Q  131 caaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtt 187  Q
    ||||||||    |||||||| |||| ||||||||| |||||||||||||||| ||||    
T  1973306 caaactcaccatgttctttattttcttgtcatttactttcttgtttttatttctgtt 1973250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 17851426 - 17851577
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    |||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  17851426 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggatttccttcttggcttagtagcccccagagtaggtgtgtttgtcacc 17851525  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttc 170  Q
     |||| |||||||||||||| || ||||| ||||||| ||||||||||||||    
T  17851526 gaactaggtcaacaaactcactgtgttctatactttcttgtcatttattttc 17851577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 20841318 - 20841523
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| |  ||||||||  |||||||||||    |||||||||||||||||||||||||||||  | ||||||| |||||||||||    
T  20841318 tagtgtaaacgaggagtttgctaagagctataaaataaggactacactagtggatttccttcctggcttggtagcccatatagtaggtgtgtttgtcacc 20841417  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     ||||   ||||||||||||||| ||||||||||||| |||  |||||||| ||||||||| || |||||||| ||||||  | ||||||| | || |||    
T  20841418 gaactatttcaacaaactcattgtgttctttactttcttgttgtttatttttttgtttttacttttgtttatcgcgtgatgttaaaacattgaacgaaac 20841517  T
Q  219 attgca 224  Q
    ||||||    
T  20841518 attgca 20841523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 23478010 - 23478151
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| |||||||||||||| |    
T  23478010 gagagctatagaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcactgaactaggtcaacaaactcact 23478109  T
Q  141 gcgttctttactttcctgtcattta-ttttcttgtttttatt 181  Q
    | |   ||||||||| ||||||||| ||||||||||||||||    
T  23478110 gtgccatttactttcttgtcatttatttttcttgtttttatt 23478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 9452117 - 9451990
Alignment:
Q  147 tttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataa 246  Q
    |||||||||||||||||||||||||||||||||||| || ||||| ||||||  || ||||||||||||||||||||||||    |||||||||| | ||    
T  9452117 tttactttcctgtcatttattttcttgtttttatttctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaa 9452018  T
Q  247 tatattaaaacaagtgtgctagaatttca 275  Q
     || |||||||||||| ||||||||||||    
T  9452017 cat-ttaaaacaagtgcgctagaatttca 9451990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 17379724 - 17379790
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  17379724 agtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17379790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 41330903 - 41331009
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    ||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||| ||| |   ||||| ||| ||||||||||    
T  41330903 agtggttttacttcctggcttagtagcccccaaagtaggtgtgtttgtcaccgaactgggtcaacaaactctttgtgccttttacattcttgtcatttat 41331002  T
Q  167 tttcttg 173  Q
    |||||||    
T  41331003 tttcttg 41331009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 12753166 - 12753016
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||  | ||||||||| ||||||||||||    ||||||||| |||||||||||||||||| ||||||||||| ||||| |||||    
T  12753166 tagtgtaaacgaggagttcgctgagagctatagaataaggactacgctagtggatttacttcctggcttggtagcctccagagtaggtgtgtttctcacc 12753067  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt 169  Q
     |||||||| ||||||||  ||| |   ||||||||| |||| ||||||||    
T  12753066 gaactgggttaacaaacttgttgtgccttttactttcttgtcttttatttt 12753016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 17012122 - 17012020
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| | || |||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  17012122 aggtcctaggtcatatagtgcaaacgaggagtttgctgaaagctgttgaataaggactacactagtggatttccttcctggcttggtagcccccagagta 17012023  T
Q  104 ggt 106  Q
    |||    
T  17012022 ggt 17012020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 33062505 - 33062403
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| |  |||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||||    
T  33062505 aggtcctaggtcatatagtgcaaacgaggagtttgctaagagctattgaataaggactacactagtggatttcctttctggcttggtagcccccagagta 33062406  T
Q  104 ggt 106  Q
    |||    
T  33062405 ggt 33062403  T

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Target: chr1; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 18390206 - 18390273
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  18390206 agtggatttccttactggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaaa 18390273  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 17355933 - 17355998
Alignment:
Q  68 gtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  17355933 gtggatttccttccaggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17355998  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 10340258 - 10340364
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    ||||||||||||||||| ||| |||||||||||||||||| |  |||| ||| |||||||||||||||||   || |   |||||||||||||| |||||    
T  10340258 agtggatttccttcctgacttagtagcccccagagtaggtgtacttgttaccgaactgggtcaacaaactttctgtgccttttactttcctgtcttttat 10340357  T
Q  167 tttcttg 173  Q
    |||||||    
T  10340358 tttcttg 10340364  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 40313263 - 40313365
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  ||||||| | ||||||||||||||| ||||||    ||||||||||||||||||||||||||||||| |||||    
T  40313263 aggtcctaggtcat-tagtgcaaacgaggagtttgctgagagctattgaatacggactacactagtggatttccttcctggcttggtagccccctgagta 40313361  T
Q  104 ggta 107  Q
    ||||    
T  40313362 ggta 40313365  T

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Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 15804212 - 15804282
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactc 137  Q
    |||| |||| |||||||||||||||||||||| ||||||| ||||||||||  |||||||| |||||||||    
T  15804212 agtgaattttcttcctggcttggtagcccccatagtaggtgtgtttgtcactgaactgggttaacaaactc 15804282  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 17038351 - 17038203
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||  ||||||||||||    |||||||||||| |||||||||||||||||||||||||||    ||| ||||    
T  17038351 tagtgtaaacgaggagtttgctgagagctagagaataaggactacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttg-cacc 17038254  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt 169  Q
     |||||||| ||||||||   || ||| ||||||||| |||| ||||||||    
T  17038253 gaactgggttaacaaacttcctgtgttttttactttcttgtcttttatttt 17038203  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 45599405 - 45599470
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||| |||||||||| ||||||    |||||||||||||||||||||||||||||| |||||||||    
T  45599405 gagaactattgaatacggactacattagtggatttccttcctggcttggtagccccgagagtaggt 45599470  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 8902122 - 8902055
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||||| |||||||||| ||||||||| | ||||| |||| ||||||||||||||||| || ||||||    
T  8902122 agtggaattccttcctgacttggtagctctcagagcaggtgtgtttgtcaccaaactgagttaacaaa 8902055  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 8281977 - 8281911
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||| |||||||||||||||||| ||| || |||||||| ||||||||||| |||| ||| |||||    
T  8281977 agtgggtttccttcctggcttggtcgcctccggagtaggtgtgtttgtcaccgaactaggttaacaa 8281911  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 51472194 - 51472244
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcac 117  Q
    |||||||||||||| ||| |||||||||||||||||| || ||||||||||    
T  51472194 agtggatttccttcttggtttggtagcccccagagtatgtgtgtttgtcac 51472244  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 50057578 - 50057545
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccaga 100  Q
    ||||||||||||||||| ||||||||||||||||    
T  50057578 agtggatttccttcctgacttggtagcccccaga 50057545  T

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Target: chr3 (Bit Score: 167; Significance: 7e-89; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 13790799 - 13790528
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||  ||||||||| ||||||||||||||||| ||||    
T  13790799 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtatatttccttcttggcttggtagcccccatagta 13790700  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||  |||    
T  13790699 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcatgtcttttattttcttgtttttatttctgtttatcgcgtgatgttga 13790600  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||    
T  13790599 aacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgtgctagaatttca 13790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 15635912 - 15636183
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||| |||||||||||||||  ||||||| | ||||||||||||||||||||||    |||| ||||||||||||||||||||||||||||||||    
T  15635912 aggtcctagatcatatagtgtaaacgaggagtttactgagagctattgaataaggactacactagtgaatttccttcctggcttggtagcccccagagta 15636011  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||||  |||    
T  15636012 ggtgtgtttgtcaccgaactgggtcatcaaactcattgtgttctttactttcatgttatttattttcttgtttttatttctgtttatcgcgtgatgttga 15636111  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||| ||||| |||| |  |||||||| ||| ||  |||||||||||||||||||||||||||    
T  15636112 aacattaatcgtagcattgaaaacgctaaaacatcaaacagaacgtattaaaacaagtgtgctagaatttca 15636183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 17702526 - 17702256
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  17702526 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagcccccagagta 17702427  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    | | ||||||||||| |||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||| |  |||  |||    
T  17702426 gttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttacttttcagtcttttattttcttgtttttatttctgtttatcgccggatgttga 17702327  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    || ||||||||||||||  ||||| ||| ||||||||||||||  |||||||||||||| ||||||||||||    
T  17702326 aa-attaatcgtaacatcacaaacgccgtaacatcatacataacttattaaaacaagtgcgctagaatttca 17702256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 24195637 - 24195373
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatg 109  Q
    ||||||||||||||||||   ||||||| | ||||||||||||||||||||||    |||||||||||||| ||||||||||||||| ||||||||| ||    
T  24195637 taggtcatatagtgtaaatgaggagtttgctgagagctattgaataaggactacactagtggatttccttcttggcttggtagcccc-agagtaggtgtg 24195539  T
Q  110 tttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacatt 209  Q
    ||| ||||| |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| |||||| | |  |||  |||||||||    
T  24195538 tttttcaccgaactgggtcaacaaactcattgtgttctttacattcctgtcttttattttcttgtttttatttctgtttaacgccggatgttgaaacatt 24195439  T
Q  210 aatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||  ||||| ||| ||||||||||||||  ||| |||||||||||||||||||||||    
T  24195438 aatcgtaacatctcaaacgccgtaacatcatacataacttatcaaaacaagtgtgctagaatttca 24195373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 1919281 - 1919545
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatg 109  Q
    |||||||||||||||||||   |||||| | || |||||||||||||||||||    |||||||||||||| ||||||||||||||| | ||||||| ||    
T  1919281 taggtcatatagtgtaaacgaagagtttgctgaaagctattgaataaggactacatcagtggatttccttcttggcttggtagcccc-atagtaggtgtg 1919379  T
Q  110 tttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacatt 209  Q
    |||||||   |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||||| ||||||  |||||||||    
T  1919380 tttgtcatggaactgggtcaacaaactcattgtgttatttactttcctgtcatttactttcttgtttttatttctgtttatcgcgtgatgttgaaacatt 1919479  T
Q  210 aatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||| |||||||||||||| | |||||| |||||| ||  |||||||||||||| ||||||||||||    
T  1919480 aattgtaacattgcaaacgcggaaacaacatacagaacgtattaaaacaagtgcgctagaatttca 1919545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 36 - 277
Target Start/End: Original strand, 19531950 - 19532195
Alignment:
Q  36 gagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaac 131  Q
    |||||||| |||||||||||||||||||| |    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| |||||    
T  19531950 gagttttctgagagctattgaataaggacgacactagtggatttccttcctggcttggtagcccccaaagtaggtgtgtttgtcaccgaattggatcaac 19532049  T
Q  132 aaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccg 231  Q
    |||||||||| ||||||||||||||| || | ||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||||||| |||| | |    
T  19532050 aaactcattgtgttctttactttcctttcttgtattttcttgtttttatttctgtttatcgcgtgatgttgaaacattgatcgtaacattgaaaacgctg 19532149  T
Q  232 aaacatcatacataatatattaaaacaagtgtgctagaatttcagg 277  Q
     ||||||||| | || ||||||||||||||||||||||| ||||||    
T  19532150 taacatcatatagaacatattaaaacaagtgtgctagaaattcagg 19532195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 44452600 - 44452328
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga-gt 102  Q
    ||||||| |||||||||||||||||  ||||||| | ||||||||||||||||| ||||    ||||||||||||||||||||||| |||||| ||| ||    
T  44452600 aggtcatgggtcatatagtgtaaacgaggagtttgctgagagctattgaataagaactacactagtggatttccttcctggcttgg-agcccctagacgt 44452502  T
Q  103 aggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatg 202  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||  ||    
T  44452501 aggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcgtttattttcttgtttttatttctttttatcacgtgatgttg 44452402  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
     |||||||| || ||||||||||||    |||||||  ||| || ||||||||||||||| |||||||||||||    
T  44452401 gaacattaaacgaaacattgcaaacgttaaaacatctgacagaacatattaaaacaagtgcgctagaatttcag 44452328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 23954596 - 23954870
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggactaag----tggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | |||||||||||||||| ||||||     |||||||||||||||||||||||||| ||||||||    
T  23954596 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataatgactaaactaatggatttccttcctggcttggtagcctccagagta 23954695  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg-tttttatttatgtttatcacgtgataatg 202  Q
    ||| |||||| |||| |||||| |||||||||||||||  |||||||||| | |||| |||||||||||| |||||||||||||||||  | ||||  ||    
T  23954696 ggtgtgtttgccaccgaactggatcaacaaactcattgtattctttacttacatgtcttttattttcttgttttttatttatgtttattgcatgatgttg 23954795  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacata-atat-attaaaacaagtgtgctagaatttcag 276  Q
    |||||||||||||||| |||||||   || ||||||||| ||| |  | |||||||||||||||||||||||||||    
T  23954796 aaacattaatcgtaactttgcaaatgtcgtaacatcata-atagagctaattaaaacaagtgtgctagaatttcag 23954870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 23 - 275
Target Start/End: Complemental strand, 295565 - 295309
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  295565 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcacc 295466  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     ||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||  |||||||  || |||  |  |||||| | || |||    
T  295465 gaactgggtcaacaaactcactgtgttctttactttcttgtcaattattttcttgtttttattcctgtttatttcgagatgttagaacattgaacggaac 295366  T
Q  219 attgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||  ||||   |||||||| |||| || |||||| |||||||| | ||||||||||    
T  295365 attataaacattgaaacatcttacagaacatattagaacaagtgcgttagaatttca 295309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 18547768 - 18547593
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| |  |||||||||||||||||||||    | |||||||||||||||||||||||||||||||||||    
T  18547768 aggtcttaggtcatatagtgtaaacgaggagtttgccaagagctattgaataaggactacactattggatttccttcctggcttggtagcccccagagta 18547669  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgttttta 179  Q
    ||| ||||||||||| || |||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||    
T  18547668 ggtgtgtttgtcaccgaattgggtcaacaaactcattgtattctctactttcctgtcatttattttgttgttttta 18547593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 28051241 - 28051071
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28051241 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactattggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcacc 28051142  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgttta 189  Q
    ||||||||||||||||||||  | ||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  28051141 aaactgggtcaacaaactcaccgtgttctttactttcttgtcatttactttcttgtttttatttctgttta 28051071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 20748203 - 20748472
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||   ||||||   ||||||| || |||||||||||    |||||||||||||||||||||||||||||| | ||||    
T  20748203 aggtcctaggtcataaagtgtaaacgatgagtttgttgagagcttttcaataaggactacactagtggatttccttcctggcttggtagccccaa-agta 20748301  T
Q  104 ggt-atgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatg 202  Q
    ||| |||||   |||| |||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||  ||    
T  20748302 ggtgatgttg--caccgaactgggttaacaaactcattatgttctttactttcttgtcatttattttcttgtttttatttctgtttatcgcgtgatgttg 20748399  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
     |||||| | |||||||| ||||||    |||||||||||| || ||||||||||||||| ||||||||||||    
T  20748400 gaacattgaacgtaacatcgcaaacgttaaaacatcatacaaaacatattaaaacaagtgcgctagaatttca 20748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 23 - 275
Target Start/End: Complemental strand, 19633991 - 19633736
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    |||||||||||||||||||||||||||||  ||||||| | |||||||| |     
T  19633991 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggatttccttcctggcttggtagccct-agagtagatgtgtttgtcgct 19633893  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     |||| |||||||||||||| || ||| ||||||||| ||||| |||||||||||||||||||| |||||||| | ||||  || |||||| | ||||||    
T  19633892 gaactaggtcaacaaactcactgtgttatttactttcttgtcaattattttcttgtttttatttctgtttatcgcatgatgttggaacattgaacgtaac 19633793  T
Q  219 attgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||    ||||||||| || || ||||||||||||||  ||||||||||||    
T  19633792 attgcaaacgttaaaacatcatgcaaaacatattaaaacaagtacgctagaatttca 19633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 35 - 275
Target Start/End: Original strand, 18034961 - 18035206
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | |||| |||| ||||||||||||    |||||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||| ||    
T  18034961 ggagtttgctgagacctatagaataaggactacactagtggatttccttcctggcttggtagcctcaagagtaggtgtgtttgtcaccgaactgggttaa 18035060  T
Q  131 caaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtt-tatcacgtgataatgaaacattaatcgtaacattgcaaactc 229  Q
    ||||||||||| ||  ||||||||||| |||||||||||||||||||||||| |||| || | ||||||  |||||  ||||  | |||| | |||||      
T  18035061 caaactcattgtgtcttttactttcctctcatttattttcttgtttttatttttgttataactcgtgatgttgaaaacttaaatggaacactacaaacgt 18035160  T
Q  230 cgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
      ||||||| |||| || ||||||||||||||| ||||||||||||    
T  18035161 ttaaacatcgtacaaaacatattaaaacaagtgcgctagaatttca 18035206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 18064259 - 18064518
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  |||||||   ||||||||| ||||||||||||    ||||||||||||||||| |||||||||| | ||||||||| |||||||||||    
T  18064259 tagtgtaaacgaggagtttgttgagagctatagaataaggactacactagtggatttccttcctgccttggtagcctctagagtaggtgtgtttgtcacc 18064358  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtt-tatcacgtgataatgaaacattaatcgtaa 217  Q
     |||||||| ||||||||||||| ||  |||||||||||||||||||||||||| ||||||||| |||| || | ||||||  ||||| ||||| |  ||    
T  18064359 gaactgggttaacaaactcattgtgtcttttactttcctgtcatttattttcttatttttatttctgttataactcgtgatgttgaaatattaaacagaa 18064458  T
Q  218 cattgcaaactccgaaacatcatacata--atatattaaaacaagtgtgctagaatttca 275  Q
    || | |||||    ||||||| ||||||  ||||||||||||||||| ||| ||||||||    
T  18064459 cactacaaacgtttaaacatcgtacataacatatattaaaacaagtgcgcttgaatttca 18064518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 467 - 627
Target Start/End: Original strand, 1727103 - 1727263
Alignment:
Q  467 gaaacaagggagaaggaattagtttctcaaaagaagcacctcttaagacaatgcaaaatctagagaaatcaaagaaacctccttgttatgagtgtataca 566  Q
    ||||||| | |||| ||||||||||||||  ||||||||| |||||||  |||||   |||||||||||||||||||||||||| |  |||||  |||||    
T  1727103 gaaacaaagaagaatgaattagtttctcagtagaagcaccgcttaagaggatgcatgttctagagaaatcaaagaaacctccttatgctgagttcataca 1727202  T
Q  567 aaacagtatgtattcctactttgttccaaaagctggaaaagctaaggttctgaacaagtca 627  Q
    |||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  1727203 aaatggtatgtattcctactttgttctaaaagctggaaaagctaaggttcttaacaagtca 1727263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 35 - 209
Target Start/End: Original strand, 13524747 - 13524924
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | |||| |||| ||||||||||||    |||||||||||||| || |||||||||||||||||||||| | ||||| ||| |||||||||||    
T  13524747 ggagtttgctgagaactatagaataaggactacaccagtggatttccttcttgacttggtagcccccagagtaggtgt-tttgtgaccgaactgggtcaa 13524845  T
Q  131 caaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacatt 209  Q
    ||||||||||  ||||||||||||| |||  |||||||||||||||| | ||||||||||| ||||||  |||||||||    
T  13524846 caaactcattttgttctttactttcttgttgtttattttcttgttttgacttatgtttatcgcgtgatgttgaaacatt 13524924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 8224959 - 8224863
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga 100  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  8224959 aggtcttaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagcccccaga 8224863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 6580920 - 6581037
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    ||||||||||||| ||||||||||||||  |||||||||| |||||||||||    
T  6580920 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggatttccttgctggcttggtagccttcagagtaggtgtgtttgtcacc 6581019  T
Q  119 aaactgggtcaacaaact 136  Q
     |||||||| ||||||||    
T  6581020 gaactgggttaacaaact 6581037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 17042829 - 17042924
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaact 136  Q
    ||||||||| ||||||||||||    ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| | ||||||||    
T  17042829 gagagctatagaataaggactacactagtggatttccttcctgccttggtagcctccagagtaggtgtgtttgtcaccaaactggtttaacaaact 17042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 15686261 - 15686329
Alignment:
Q  69 tggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactc 137  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||    
T  15686261 tggatttccttcctggcttggtagcccctagagtaggtgtgtttgtcatcgaactgggtcaacaaactc 15686329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 9031447 - 9031569
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||||||||||||||||    ||||||||||||||||| ||||||||||||||||||||||    ||| |||| |||||||| ||    
T  9031447 ggagtttgctgagagctattgaataaggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttg-caccgaactgggttaa 9031545  T
Q  131 caaactcattgcgttctttacttt 154  Q
    ||||||||||| | | ||||||||    
T  9031546 caaactcattgtgctttttacttt 9031569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 14406732 - 14406799
Alignment:
Q  68 gtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||||| |||||||| |||||||    
T  14406732 gtggatttccttcctggcttggtagcccacaaagtaggtgtgtttgtcaccgaactgggttaacaaac 14406799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 446 - 563
Target Start/End: Original strand, 15668911 - 15669028
Alignment:
Q  446 caatgatttatggtttcagcagaaacaagggagaaggaattagtttctcaaaagaagcacctcttaagacaatgcaaaatctagagaaatcaaagaaacc 545  Q
    |||||||||||||| ||| || ||||||||||||||||||| | || | ||| |||||||||  |||||  ||||||| ||  |||||| ||||||||||    
T  15668911 caatgatttatggtgtcatcataaacaagggagaaggaatttgattatgaaatgaagcacctaataagaggatgcaaattccggagaaaccaaagaaacc 15669010  T
Q  546 tccttgttatgagtgtat 563  Q
    |||||||  |||||||||    
T  15669011 tccttgtgttgagtgtat 15669028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 9036800 - 9036728
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||||| | ||||||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||    
T  9036800 ggagtttgctgagagctattgaataaggactacactagtggatttccttcctggtttggtagcccccagagta 9036728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 11656142 - 11656010
Alignment:
Q  7 caggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagt 102  Q
    |||||| ||||||||| |||||||||  ||||||| | ||||||| ||| ||||||||||    |||| ||||| |||||| |||||||||| |||||||    
T  11656142 caggtcctaggtcataaagtgtaaacgaggagtttgctgagagcttttggataaggactacactagtgaatttctttcctgacttggtagcctccagagt 11656043  T
Q  103 aggtatgtttgtcaccaaactgggtcaacaaact 136  Q
    ||||    ||| ||||||||||||| ||||||||    
T  11656042 aggtgacattg-caccaaactgggttaacaaact 11656010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 11558420 - 11558489
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactc 137  Q
    |||||||||||||||||||||||||||| ||| ||||||| || |||||||| |||| ||| |||||||||    
T  11558420 agtggatttccttcctggcttggtagcctccatagtaggtgtg-ttgtcaccgaacttggttaacaaactc 11558489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 11567689 - 11567758
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactc 137  Q
    |||||||||||||||||||||||||||| ||| ||||||| || |||||||| |||| ||| |||||||||    
T  11567689 agtggatttccttcctggcttggtagcctccatagtaggtgtg-ttgtcaccgaacttggttaacaaactc 11567758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 17140434 - 17140532
Alignment:
Q  94 ccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcattta-ttttcttgtttttatttatgtttatc 191  Q
    ||||| |||||||  ||||| | || || |||||||||||| |||||  |||||||||||||||| | |||| |||||||||||| |||||||||||||    
T  17140434 ccccatagtaggtgagtttgacgccgaattgggtcaacaaattcattatgttctttactttcctggcttttatttttcttgttttgatttatgtttatc 17140532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 31649747 - 31649690
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgg 125  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||    
T  31649747 agtggatttccttcctggcttggtag-acccagagtaggtgtgtttgtcaccgaactgg 31649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 13913895 - 13913739
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||  ||||||||| ||    || ||||||||| |||||||||||||||||||||||||||    ||| ||||    
T  13913895 tagtgtaaacgaggagtttgctgagagctagagaataaggagtacactagcggatttcct-cctggcttggtagcccccagagtaggtgacgttg-cacc 13913798  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttt 177  Q
     ||| |||| |||||||||  || ||| ||||||||| |||| |||||||| |||||||    
T  13913797 gaaccgggttaacaaactctctgtgttttttactttcttgtcttttattttgttgtttt 13913739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 3552317 - 3552373
Alignment:
Q  69 tggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgg 125  Q
    ||||||| |||||||||||||||||||| |||||||||  |||||||||| ||||||    
T  3552317 tggattttcttcctggcttggtagccccaagagtaggtgcgtttgtcaccgaactgg 3552373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 286994 - 287065
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactca 138  Q
    |||||||||||||||||| ||||||| ||||| |||| || ||||||||| | |||| ||| ||||||||||    
T  286994 agtggatttccttcctggtttggtagtccccatagtaagtgtgtttgtcatcgaactaggttaacaaactca 287065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 980466 - 980533
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||||||||||||||| ||||||||||||||| | ||||| |||||||| |  |||| ||||||||||    
T  980466 agtggatttccttccttgcttggtagcccccaaaataggtgtgtttgtctctgaactaggtcaacaaa 980533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 389 - 488
Target Start/End: Complemental strand, 13361386 - 13361287
Alignment:
Q  389 atgataattctcttaaggagtttatcattcatagcatttacagaagcatgctagcttcaatgatttatggtttcagcagaaacaagggagaaggaattag 488  Q
    |||||||| || || | ||||||||||||  | ||||| |||||||||   |||||||||||||||||||  | || || ||||||||||||||||||||    
T  13361386 atgataatgcttttgaagagtttatcattggtggcattaacagaagcaaattagcttcaatgatttatggagtaagtaggaacaagggagaaggaattag 13361287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 18477033 - 18476957
Alignment:
Q  24 agtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccc 96  Q
    |||||||||  ||||||| | ||||||| | ||||||||||||    ||||||||||||||||||||||||||||||    
T  18477033 agtgtaaacgaggagtttgctgagagctttagaataaggactacactagtggatttccttcctggcttggtagcccc 18476957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 8749122 - 8749059
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtag 104  Q
    ||||||||||||||| ||||||    |||||||||||||||| ||||||||| |||||||||||    
T  8749122 gagagctattgaatacggactacactagtggatttccttcctagcttggtagtccccagagtag 8749059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 7479191 - 7479276
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtagg 105  Q
    ||||||||||  ||||||| | ||||||||  ||||||||||||    |||||||||||| ||||||||||||||||||||| ||||    
T  7479191 tagtgtaaacgaggagtttgctgagagctagagaataaggactacactagtggatttcct-cctggcttggtagcccccagattagg 7479276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 3445107 - 3445174
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    ||||||||||||||||| |||| ||||| | ||||||||| ||||| ||||||||||| || |||||||    
T  3445107 agtggatttccttcctgacttgatagcctc-agagtaggtgtgtttatcaccaaactgagttaacaaac 3445174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 21719027 - 21719076
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcac 117  Q
    |||||||||||||||||||||||||| ||  ||||||||| ||||||||||    
T  21719027 agtggatttccttcctggcttggtag-ccttagagtaggtgtgtttgtcac 21719076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 13917897 - 13917861
Alignment:
Q  69 tggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||||||| |||||||||||||||||||||||||    
T  13917897 tggatttccttc-tggcttggtagcccccagagtaggt 13917861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 20976091 - 20976124
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccaga 100  Q
    |||||||||||||||||| |||||||||||||||    
T  20976091 agtggatttccttcctggtttggtagcccccaga 20976124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 7e-89; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 23758745 - 23758474
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  |||||||   |||| |||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  23758745 aggtcctaggtcatatagtgtaaacgaggagtttgttgagaactattgaataaggactacactagtggatttccttcctggcttggtagcccccagagta 23758646  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    | | ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||  |||    
T  23758645 gttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgtttttatttctgtttatcgcgtgatgttga 23758546  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||||||||||||| | ||||||||||||| ||   ||||||||||||||||||||||||||    
T  23758545 aacattaatcgtaacattgcaaacactgaaacatcatacaaaactaattaaaacaagtgtgctagaatttca 23758474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 24790198 - 24790469
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||| ||||||||||||||||    ||||||||||||||||| |||||||||||||||||||    
T  24790198 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagatattgaataaggactactctagtggatttccttcctgacttggtagcccccagagta 24790297  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||  |||    
T  24790298 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgtttttatttctgtctatcgcgtgatgttga 24790397  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||||||| ||||||||| |||||| |||| || ||||||||| ||||| ||||||||||||    
T  24790398 aacattaatcgtaacattacaaactccgtaacatcgtacaaaacatattaaaataagtgggctagaatttca 24790469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 12910609 - 12910338
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||| ||||||||||||||   |||||| | || |||||||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  12910609 aggtcctaggccatatagtgtaaacgacgagtttgctgaaagctattgaataaggactacacttgtggatttccttcctggcttggtagcccccagagta 12910510  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||| |||||||| ||||||  |||    
T  12910509 ggtatgtttgtcaccgaactgggtcaacaaactcactgtgttctttaattttctgtcatttattttcttgtttttatttctgtttatcgcgtgatgttga 12910410  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||| |||||||||||||||||||| | ||||||||||||| ||  |||||||||||||| |||| |||||||    
T  12910409 aactttaatcgtaacattgcaaacgctgaaacatcatacagaacgtattaaaacaagtgcgctaaaatttca 12910338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 22611012 - 22610741
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||  ||||||  ||||    |||    
T  22611012 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctttcttggtttccccttttgta 22610913  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||  |||    
T  22610912 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgtttttatttctgtttatcgcgtgatgttga 22610813  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||| ||||||||||||| ||||||||||| || ||||||||| ||||| ||||||||||||    
T  22610812 aacattaatcgtaatattgcaaactccgtaacatcatacagaacatattaaaataagtgcgctagaatttca 22610741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 36398834 - 36399056
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  36398834 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactagtggatttccttcctggcttggtagcccccagagta 36398933  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||     ||||  |||    
T  36398934 ggtgtgtttgtcaccgaactgggtcaacaaactcattgcgttctttactttcctgtcgtttattttcttgtttttatttctgtttacgctatgatgttga 36399033  T
Q  204 aacattaatcgtaacattgcaaa 226  Q
    ||||||||||| ||||| |||||    
T  36399034 aacattaatcgaaacatcgcaaa 36399056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 19466589 - 19466696
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||||| ||||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||    
T  19466589 ggagttttctgagagctatagaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttatcaccgaactgggttaa 19466688  T
Q  131 caaactca 138  Q
     |||||||    
T  19466689 gaaactca 19466696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 18765789 - 18765693
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||||||||| ||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  18765789 taggtcatatagtgcaaacgaggagtttactgagagctattgaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggt 18765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 26860336 - 26860432
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga 100  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  26860336 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagcccccaga 26860432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 21250302 - 21250407
Alignment:
Q  70 ggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaact-gggtcaacaaactcattgcgttctttactttcctgtcatttattt 168  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| || |   ||||||||| ||||||||||||    
T  21250302 ggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactggggtcaacaaactcactgtgccttttactttcttgtcatttattt 21250401  T
Q  169 tcttgt 174  Q
     |||||    
T  21250402 acttgt 21250407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 21530468 - 21530331
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||||||| ||||||| ||||    |||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||||| | ||||||||| ||    
T  21530468 gagagctatagaataagaactacactagtggatttccttcttggcttggtagcccctagagtaggcatgtttgtcaccgaactggataaacaaactcgtt 21530369  T
Q  141 gcgttctttactttcctgtcattta-ttttcttgtttt 177  Q
    | |   ||||||||| ||||||||| ||||||||||||    
T  21530368 gtgccatttactttcttgtcatttatttttcttgtttt 21530331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 24317912 - 24318012
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccaga-gtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcattta 165  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||| || ||||| |||||||  ||||||   |||||||| ||||| ||||    
T  24317912 agtggatttccttcctggcttggtaacccccagatgtaggtgtgtttgtcaccgaattgggttaacaaaccaattgcgccttttacttttctgtccttta 24318011  T
Q  166 t 166  Q
    |    
T  24318012 t 24318012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 29566130 - 29566031
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||||||    
T  29566130 aggtcctaggtcat-tagtgcaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtag-ccccagagta 29566033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 12952529 - 12952462
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    ||||||||||||||||| |||||||||| ||| ||||||| ||||||||||| |||||||| ||||||    
T  12952529 agtggatttccttcctgacttggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 12952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 31587532 - 31587467
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||| |||||||| |||||    
T  31587532 agtggatttccttcctggcttggtag-ctccagagtaggtgtgtttgtcaccgaactgggttaacaa 31587467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 25347250 - 25347197
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaa 120  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  25347250 agtgggtttcctttctggcttggtagcccccagagtaggtgtgtttgtcaccaa 25347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 20649659 - 20649727
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    ||||||||||||||||| ||| |||||||| ||||||||| |||||||| || |||||||| |||||||    
T  20649659 agtggatttccttcctgactttgtagcccctagagtaggtgtgtttgtccccgaactgggttaacaaac 20649727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 19198381 - 19198435
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaac 122  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  19198381 agtggatttccttcctggcttgatag-ccccagagtaggtgtgtttgtcaccaaac 19198435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 27111136 - 27111071
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||||||| | |||||| |||||    
T  27111136 agtggacttccttcctggcttggtag-ccccagagtaggtgtgtttgtcaccgatctgggttaacaa 27111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 15328419 - 15328325
Alignment:
Q  17 gtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggta 107  Q
    |||||| ||||||||   ||||||| |  |||||| ||||||||||||||    | |||||||||||| ||||||||||||||||||||||||||    
T  15328419 gtcataaagtgtaaatgaggagtttgcttagagcttttgaataaggactacactaatggatttccttcttggcttggtagcccccagagtaggta 15328325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 24283635 - 24283688
Alignment:
Q  71 gatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactg 124  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||| |||||    
T  24283635 gatttccttcctgacttggtagcccccagaataggtgtgtttgtcaccgaactg 24283688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 22582470 - 22582363
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcg-ttctttactttcctgtcattta 165  Q
    |||| |||| |||||| |||||||||| ||   ||||||| ||||||||| | ||||| ||||||||||||  || | || ||||||||| |||||||||    
T  22582470 agtgtattttcttccttgcttggtagctcctgtagtaggtgtgtttgtcatcgaactgagtcaacaaactctctgtgtttttttactttcttgtcattta 22582371  T
Q  166 ttttcttg 173  Q
    ||||||||    
T  22582370 ttttcttg 22582363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 13315006 - 13315098
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagccccc 97  Q
    ||||| |||||||| ||||| ||||  ||||||| | ||||||| ||||||||||||||    ||||||||| ||||||||||| |||||||||    
T  13315006 aggtcctaggtcat-tagtgcaaacgaggagtttgctgagagctcttgaataaggactacactagtggattttcttcctggcttagtagccccc 13315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 20475378 - 20475446
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    |||| ||||| ||||||||||||| ||||||| || ||| |||||||||||| || ||||| |||||||    
T  20475378 agtgaatttctttcctggcttggttgcccccaaagcaggcatgtttgtcaccgaattgggttaacaaac 20475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 552
Target Start/End: Complemental strand, 26444212 - 26444126
Alignment:
Q  466 agaaacaagggagaaggaattagtttctcaaaagaagcacctcttaagacaatgcaaaatctagagaaatcaaagaaacctccttgt 552  Q
    |||||||| |||||| || || |||||||| |||||||||||||| |||  ||||| | ||| | |||||||||  |||||||||||    
T  26444212 agaaacaatggagaaagatttggtttctcagaagaagcacctcttgagaggatgcatactcttgtgaaatcaaaataacctccttgt 26444126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 2e-86; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 22404801 - 22405072
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||||||| |||| |    
T  22404801 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactatactagtggatttccttcctggcttggtagcccctagagca 22404900  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||| |||||||| | ||||  |||    
T  22404901 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttcctttcatttattttcttgtttttgtttctgtttatcgcatgatgttga 22405000  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||||||||||||  | ||||||||||||||||  |||||||||||||||||||||||||||    
T  22405001 aacattaatcgtaacattgcaaatgctgaaacatcatacataacctattaaaacaagtgtgctagaatttca 22405072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 25105460 - 25105732
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | || |||||||||||||||||||    ||||||||||||||||| |||||||||||| || |||    
T  25105460 aggtcctaggtcatatagtgtaaacgaggagtttgctgaaagctattgaataaggactacactagtggatttccttcctgacttggtagcccctagtgta 25105559  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt-cttgtttttatttatgtttatcacgtgataatg 202  Q
    |||  | |||||||| |||||||||||||| |||| || |||||||| |||||| || |||||||| ||||||||||||| ||||||||  |||||  ||    
T  25105560 ggtgcgcttgtcaccgaactgggtcaacaagctcactgtgttctttagtttcctatcttttatttttcttgtttttatttctgtttatcgtgtgatgttg 25105659  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||| ||||||||||||    
T  25105660 aaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgcgctagaatttca 25105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 25164553 - 25164825
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | || |||||||||||||||||||    ||||||||||||||||| |||||||||||| || |||    
T  25164553 aggtcctaggtcatatagtgtaaacgaggagtttgctgaaagctattgaataaggactacactagtggatttccttcctgacttggtagcccctagtgta 25164652  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt-cttgtttttatttatgtttatcacgtgataatg 202  Q
    |||  | |||||||| |||||||||||||| |||| || |||||||| |||||| || |||||||| ||||||||||||| ||||||||  |||||  ||    
T  25164653 ggtgcgcttgtcaccgaactgggtcaacaagctcactgtgttctttagtttcctatcttttatttttcttgtttttatttctgtttatcgtgtgatgttg 25164752  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||| ||||||||||||    
T  25164753 aaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgcgctagaatttca 25164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 24189982 - 24189712
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | |||||||||||||||| |||||    |||| |||||||||| |||||||||||||||||||||    
T  24189982 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaagactacactagtgaatttccttcccggcttggtagcccccagagta 24189883  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
     || ||||||||||| |||| |||||||||||||| || |||||||||||||||||| ||||||||||||||||| ||| |||||||| ||| ||  |||    
T  24189882 tgtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctttactttcctgtcttttattttcttgttttt-tttttgtttatcgcgtaatgttga 24189784  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||||||   |||||||| ||||||||||| || ||||||||| | ||  ||||||||||||    
T  24189783 aacattaatcgtaacataaaaaactccgtaacatcatacagaacatattaaaagatgtacgctagaatttca 24189712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 23420601 - 23420824
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||||||||||||   ||||||| | ||||||||||||||||||||||    |||||||||||||||| ||||||||||||  ||||||    
T  23420601 aggtcctaggtcatatagtgtaaatgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctagcttggtagcccttagagta 23420700  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| | ||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || |||||  ||||| ||||    
T  23420701 ggtgtatttgtcaccgaactgggtcagcaaactcattgtgctccttactttcctgtcatttattttcttgtttttatttctgcttatcgtgtgatgatga 23420800  T
Q  204 aacattaatcgtaacattgcaaac 227  Q
    ||||||||||||||||||| ||||    
T  23420801 aacattaatcgtaacattgtaaac 23420824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 13735013 - 13735198
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||||| ||||||||||||||    | ||||||||||||||| ||||||| |||||||||||    
T  13735013 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactaatggatttccttcctgacttggtaacccccagagta 13735112  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgttta 189  Q
    ||| ||||||||||| || |||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||| ||||||    
T  13735113 ggtgtgtttgtcaccgaagtgggtcaacaaactcactgtgtcttttactttcctgtcatttattttcttgtttttatttctgttta 13735198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 67 - 276
Target Start/End: Original strand, 9422570 - 9422779
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccaga-gtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcattta 165  Q
    ||||||||||||||||| ||||| || ||||||| |||||| ||||||||||| |||| ||||||||||||||||| |||||||||||| ||||| ||||    
T  9422570 agtggatttccttcctgacttgg-agtccccagatgtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttacttttctgtcgttta 9422668  T
Q  166 ttttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgc 265  Q
    ||||||||||||||||| ||||||||| |||||  || |||| ||| || |||||||||||     |||||||  ||| || |||||||||||||||  |    
T  9422669 ttttcttgtttttatttctgtttatcatgtgatgttggaacactaaacggaacattgcaaatgttaaaacatctgacagaacatattaaaacaagtgcac 9422768  T
Q  266 tagaatttcag 276  Q
    |||||||||||    
T  9422769 tagaatttcag 9422779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 26036915 - 26036744
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||   |||||| | ||||||||| |||||||||| |    |||||||||||||||||||||||||||||||||||||||| |||||  ||||    
T  26036915 tagtgtaaacgatgagtttgctgagagctatagaataaggacaacactagtggatttccttcctggcttggtagcccccagagtaggtgtgttttccacc 26036816  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttat 190  Q
     ||||||||||||||||||| |  ||| ||||||||| |||||||||||||||| ||||||||| |||||||    
T  26036815 gaactgggtcaacaaactcactttgttgtttactttcttgtcatttattttcttatttttatttttgtttat 26036744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 23 - 178
Target Start/End: Original strand, 30605745 - 30605903
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| |||||||||||     |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  30605745 tagtgtaaacgaggagtttgctgagagctatagaataaggactgcactagtggatttccttcctggattggtagcccccagagtaggtgtgtttgtcacc 30605844  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgttttt 178  Q
     ||||||||||||||||||| || ||||||||||||| |||| |||| ||||||||||||    
T  30605845 gaactgggtcaacaaactcactgtgttctttactttcttgtctttta-tttcttgttttt 30605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 26329268 - 26329438
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    ||||||||||||||||||||||||||| | |||||||||| ||||| |||||    
T  26329268 tagtgtaaacgaggagtttgctgagagctatagaataaggactacaccagtggatttccttcctggcttggtagctcacagagtaggtgtgtttatcacc 26329367  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcattta-ttttcttgtttttatttatgttta 189  Q
     ||||||||||||||||||| || ||| ||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  26329368 gaactgggtcaacaaactcactgtgtt-tttaccttcttgtcatttatttttcttgtttttatttctgttta 26329438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 13338696 - 13338543
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||| ||| ||||||||| ||    |||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  13338696 tagtgtaaacgaggagtttgctgagagttatagaataaggattacactagtggatttccttcctggcttggtagcccc-agagtatgtgtgtttgtcacc 13338598  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg 173  Q
     |||||||| |||||||||| || ||||||||||||| |||| ||||||||||||    
T  13338597 gaactgggttaacaaactcactgtgttctttactttcttgtcttttattttcttg 13338543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 20845834 - 20846018
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||| | ||||||||||||||    ||||||||||||||||| |||||||||||||| ||||    
T  20845834 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagattttgaataaggactacactagtggatttccttcctgacttggtagcccccatagta 20845933  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgttta 189  Q
    |||    ||| |||| |||||||| |||||||||  || |   |||||||||||||||||||||||||||||||||||| ||||||    
T  20845934 ggtgacgttg-caccgaactgggttaacaaactctgtgtgccttttactttcctgtcatttattttcttgtttttatttttgttta 20846018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 35 - 170
Target Start/End: Complemental strand, 23623970 - 23623831
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||| |||||| |||||    |||||||||||||||| | || |||||||||||||||||| ||||||||||| || | ||||||    
T  23623970 ggagtttgctgagagctatagaataacgactacactagtggatttccttcctaggttagtagcccccagagtaggtgtgtttgtcaccgaaataggtcaa 23623871  T
Q  131 caaactcattgcgttctttactttcctgtcatttattttc 170  Q
    ||||||||||| ||||||||||||| |||  |||||||||    
T  23623870 caaactcattgtgttctttactttcttgtattttattttc 23623831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 18221193 - 18221079
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||||||| ||||||||||||    |||||||||||||| ||||||||||| ||||| ||||||| ||||||||||| |||||| |||||||||||||     
T  18221193 gagagctatggaataaggactacactagtggatttccttcttggcttggtagaccccaaagtaggtgtgtttgtcaccgaactggatcaacaaactcatc 18221094  T
Q  141 gcgttctttactttc 155  Q
      |||||||||||||    
T  18221093 ttgttctttactttc 18221079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 20498193 - 20498295
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||| |||||||||| ||||||||    
T  20498193 aggtcctaggtcatatagtgcaaacgaggagtttgctgagagctattgaataaggactacacgagtggatttccttcctgacttggtagcctccagagta 20498292  T
Q  104 ggt 106  Q
    |||    
T  20498293 ggt 20498295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 26183280 - 26183376
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||||||||| ||||  | ||||| | ||||||||||||||||||||||    |||| |||||||||||||||||||||||||||||||||||    
T  26183280 taggtcatatagtgcaaacgagaagtttgctgagagctattgaataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggt 26183376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 7897955 - 7898056
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||    
T  7897955 aggtcctaggtcat-tagtgcaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagcctccagagta 7898053  T
Q  104 ggt 106  Q
    |||    
T  7898054 ggt 7898056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 13942100 - 13942207
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa-actcattgcgttctttactttcctgtcattta 165  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||| ||| |||||  |||| || |   ||||||||| |||||||||    
T  13942100 agtggatttccttcctgacttggtagcccccagagtaggtgtgtttgtcaccgaactaggttaacaactctca-tgtgccatttactttcttgtcattta 13942198  T
Q  166 ttttcttgt 174  Q
    |||||||||    
T  13942199 ttttcttgt 13942207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 20714839 - 20714910
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactca 138  Q
    |||||||||||| |||| ||||||||||| |||||||||| ||||||||||| |||| ||||||||||||||    
T  20714839 agtggatttcctacctgacttggtagccctcagagtaggtgtgtttgtcaccgaactaggtcaacaaactca 20714910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 17661513 - 17661583
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactc 137  Q
    |||| |||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||| |||||||||    
T  17661513 agtgaatttccttccaggcttggtagcccccatagtaggtgtgtttgtcaccgaactgggttaacaaactc 17661583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 22246391 - 22246478
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggta 91  Q
    ||||| ||||||| |||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||    
T  22246391 aggtcctaggtcaaatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggta 22246478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 24117652 - 24117586
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||| ||||||||||||||||| ||||||||||  ||||||||||| |||||||| |||||    
T  24117652 agtggatttcattcctggcttggtagccaccagagtaggcgtgtttgtcaccgaactgggttaacaa 24117586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 17920824 - 17920925
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||| ||||  ||||||| | ||||||| ||||||| ||||||    |||||||||||||||||||||||||||||| ||||||    
T  17920824 aggtcctaggtcata-agtgcaaacgaggagtttgctgagagcttttgaatacggactacactagtggatttccttcctggcttggtagcccctagagta 17920922  T
Q  104 ggt 106  Q
    |||    
T  17920923 ggt 17920925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 11204778 - 11204739
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11204778 agtggatttccttcctggcttggtagcccccagagtaggt 11204739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 20740991 - 20741078
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||||||  ||||||| | ||||||||  ||||||||||||    ||||||||||| |||| |||||||||||||||||||||||    
T  20740991 tagtgtaaacgaggagtttgctgagagctagagaataaggactacactagtggatttccctcctcgcttggtagcccccagagtaggt 20741078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 22130889 - 22131037
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||  ||||||||| ||    |||||||||||| |||||||||||||||||||||||||||    ||| ||||    
T  22130889 tagtgtaaacgaggagtttgctgagagctagagaataaggattacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttg-cacc 22130986  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt 169  Q
     |||||||| |||||||||  || | | ||||||||| |||| ||||||||    
T  22130987 gaactgggttaacaaactctctgtgctttttactttcttgtcttttatttt 22131037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 22252081 - 22252162
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggc 85  Q
    ||||| ||||||||||||||||||   |||||||   ||||||||||||||||||||||    |||||||||||||||||||    
T  22252081 aggtcctaggtcatatagtgtaaatgaggagtttgttgagagctattgaataaggactacactagtggatttccttcctggc 22252162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 22979801 - 22979736
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||| |||| |||||| ||||||||||||| | ||||||| ||||||||||| |||||||| |||||    
T  22979801 agtgtatttgcttccttgcttggtagcccc-atagtaggtgtgtttgtcaccgaactgggttaacaa 22979736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 159; Significance: 4e-84; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 25713 - 25984
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||||||||  |||||||   ||||||||||||||||||||||    ||||||||||||||||||||||||||| |||||||||    
T  25713 aggtcctaggtcatctagtgtaaacgaggagtttgttgagagctattgaataaggactacaccagtggatttccttcctggcttggtagctcccagagta 25812  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||    
T  25813 ggtgtgtttgtcaccgaactgggtcaataaactcattgtgttatttactttcctgtcatttattttcttgtttttatttatgtttatcgcgtgatgttga 25912  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||| |||||||||| | ||||||||||||| ||  |||||||||||||  ||||||||||||    
T  25913 aacattaatcgtagcattgcaaacgctgaaacatcatacagaacgtattaaaacaagtacgctagaatttca 25984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 4e-84; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 11521449 - 11521719
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||| |||||||||||||||||||||||||| ||||||    
T  11521449 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtagatttccttcctggcttggtagcccctagagta 11521548  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||  ||||||||||||||  |||    
T  11521549 ggtgtgtttgtcaccaaactgggtcaacaaactcattgtgttatttactttcctgtcatttactttcttg-ttttatttcagtttatcacgtgatgttga 11521647  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||||||||||||||||||| | | ||||||||| ||||  |||||||||||||| ||||||||||||    
T  11521648 aacattaatcgtaacattgcaaacgctgtaacatcatatataacttattaaaacaagtgcgctagaatttca 11521719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 14 - 273
Target Start/End: Original strand, 16207926 - 16208189
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatg 109  Q
    ||||||||| |||||||||  ||||||| | ||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||    
T  16207926 taggtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtg 16208025  T
Q  110 tttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacatt 209  Q
    |||||| || || |||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||  || ||||||    
T  16208026 tttgtcgccgaaatgggtcaacaaactcattgtcttctttactttcctatcatttattttattgtttttatttatgtttattgcgtgatgttggaacatt 16208125  T
Q  210 aatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaattt 273  Q
     | || |||||| ||||     ||||||||||||||| ||||||||||||||||||||||||||    
T  16208126 gaacgaaacattacaaatgttaaaacatcatacataacatattaaaacaagtgtgctagaattt 16208189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 11588584 - 11588315
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||| |||||||||||  ||||||||  ||||||||||||||||||||||    |||||||||||||||||||||||||||| | ||||||    
T  11588584 aggtcctaggtcaaatagtgtaaacgaggagtttttagagagctattgaataaggactacactagtggatttccttcctggcttggtagccgctagagta 11588485  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcattta-ttttcttgtttttatttatgtttatcacgtgataatg 202  Q
    ||| ||||||||||| | ||||||||||||||||| || |||||||||||| ||||| |||| ||||||| ||||||||| ||||| |  | ||||  ||    
T  11588484 ggtgtgtttgtcaccgagctgggtcaacaaactcactgtgttctttacttt-ctgtcttttatttttcttatttttatttctgtttgttgcatgatgttg 11588386  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaattt 273  Q
    |||||||||||||||||||||||||  || |||||||||||||| ||||||||||||||| ||||||||||    
T  11588385 aaacattaatcgtaacattgcaaacgtcgtaacatcatacataacatattaaaacaagtgcgctagaattt 11588315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 8 - 272
Target Start/End: Complemental strand, 645253 - 644985
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||||||||  | ||||| | ||||||||||||||||||||||     |||||||||||||||||||| |||||||||| ||||    
T  645253 aggtcctaggtcatgtagtgtaaacgagaagtttgctgagagctattgaataaggactacactggtggatttccttcctggcttcgtagcccccatagta 645154  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||  |||||||| |||||| |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||    
T  645153 ggtgtgtttgtcactgaactgggttaacaaattcattgtgttatttactttcctgtcatttattttcttgtttttatttctgtttatcgcgtgatgttga 645054  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatt 272  Q
    ||||||| | ||||||||||||||    |||||||||||| ||  |||||||||||||| |||||||||    
T  645053 aacattagttgtaacattgcaaacgattaaacatcatacagaacgtattaaaacaagtgcgctagaatt 644985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 11998999 - 11998728
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga-gt 102  Q
    ||||| ||||||||||||||||||   |||||||   ||||||||||||||||||||||    ||||||||||||||||||||||| ||||||| || ||    
T  11998999 aggtcctaggtcatatagtgtaaatgaggagtttgttgagagctattgaataaggactacactagtggatttccttcctggcttgg-agcccccggacgt 11998901  T
Q  103 aggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatg 202  Q
    |||| ||||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||  ||    
T  11998900 aggtgtgtttgtcatcgaactgggtcaacaaactcattgtgttctttactttcctgtcgtttattttcttgtttttgtttctgtttatcacgtgatgttg 11998801  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
     |||||||| || ||||||||||||    |||||||  |||||| ||||||||||||||| ||||||||||||    
T  11998800 gaacattaaacggaacattgcaaacgttaaaacatctgacataacatattaaaacaagtgcgctagaatttca 11998728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 4458859 - 4458588
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||||| ||||||||||||||    ||| |||||||||||||||||||||||||||||||||    
T  4458859 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactagtagatttccttcctggcttggtagcccccagagta 4458760  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||| |||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||  ||     
T  4458759 ggtgtgtttgtcaccgaactcggtcaacaaattcactgtgttctttactttcctgtcatttattttcttgtttttatttctgtttgttacgcgatgttgg 4458660  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||||| || ||||||||||||    |||||||  ||| || ||||||||||||||| ||| ||||||||    
T  4458659 aacattaaacggaacattgcaaacgttaaaacatctgacagaacatattaaaacaagtgcgctcgaatttca 4458588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 20991647 - 20991476
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | |||||||||  |||||||||||    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20991647 tagtgtaaacgaggagtttgctgagagctataaaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcacc 20991548  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgt-ttttatttatgttta 189  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  20991547 gaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgttttttatttatgttta 20991476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 14165275 - 14165015
Alignment:
Q  18 tcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta-ggtatgttt 112  Q
    |||||||||||||||  |||||||   ||||||||||||||||||||||    ||||||||||||||||||||  |||||||| |||  | ||| |||||    
T  14165275 tcatatagtgtaaacgaggagtttgttgagagctattgaataaggactacactagtggatttccttcctggctatgtagcccc-agacaaaggtgtgttt 14165177  T
Q  113 gtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaat 212  Q
    |||||| |||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||| |||||||| | ||||  ||||||||||||    
T  14165176 gtcaccgaactggatcaacaaactcattgtgttatttactttcctgtcatttactttcttg-ttttatttctgtttatcgcatgatgttgaaacattaat 14165078  T
Q  213 cgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |  |||||| |||||  || ||||||||||  ||   ||||||||||||||||||||||||||    
T  14165077 cacaacattacaaacgtcgtaacatcatacggaactaattaaaacaagtgtgctagaatttca 14165015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 13455151 - 13455422
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| || |||||| |||||||||  ||||||| |  |||||| ||||||||||||||    |||||||||||||||| ||||||||||||||||||||    
T  13455151 aggtcctaagtcataaagtgtaaacgaggagtttgccaagagcttttgaataaggactacactagtggatttccttccttgcttggtagcccccagagta 13455250  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    |||    ||| |||| |||| ||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||||| || ||||||| |||||||  ||     
T  13455251 ggtgacgttg-caccgaactaggttaacaaactcattgtgttctttactttcttgtcatttattctcttgtttttagttctgtttataacgtgatgttgg 13455349  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
    |||||| | |||||||| | ||||    |||||||||||| || |||||||||||| | ||||||||||||||    
T  13455350 aacatttaacgtaacatcgaaaacgttaaaacatcatacagaacatattaaaacaaatttgctagaatttcag 13455422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 16436857 - 16436709
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||||||  ||||||||||||    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||| || |||||||||||||||| |    
T  16436857 gagagctacagaataaggactacactagtggatttccttccttgcttggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcact 16436758  T
Q  141 gcgttctttactttcctgtcatttattttcttgtttttatttatgttta 189  Q
    | ||||||||||||| ||||||||| |||| ||||||||||| ||||||    
T  16436757 gtgttctttactttcttgtcatttactttcatgtttttatttctgttta 16436709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 294 - 564
Target Start/End: Complemental strand, 20094147 - 20093879
Alignment:
Q  294 tatacaaaatgaaattcgcataatgagaaatgaaatattggagaaaggtcagctttcatatactcagaagaaaattgatagacctttaaacaagtatgat 393  Q
    |||||||||||||| || | ||||||||||| || | || ||||||||| |  | ||||||||||| || |    ||||| |||| |||||||||||||     
T  20094147 tatacaaaatgaaaatctcttaatgagaaataaatttttagagaaaggttaaatatcatatactcataatatc--tgataaacctctaaacaagtatgaa 20094050  T
Q  394 aattctcttaaggagtttatcattcatagcatttacagaagcatgctagcttcaatgatttatggtttcagcagaaacaagggagaaggaattagtttct 493  Q
    |||  |||| |||||||||||||  || | ||| |||||||||   |||||||||||||||||||| | |||| |||||| |||||||||||||||||||    
T  20094049 aatgttcttgaggagtttatcatagatggaattgacagaagcaaattagcttcaatgatttatggtgttagcataaacaaaggagaaggaattagtttct 20093950  T
Q  494 caaaagaagcacctcttaagacaatgcaaaatctagagaaatcaaagaaacctccttgttatgagtgtata 564  Q
    || ||||| ||||||||||    ||| |   |||| |||||| ||||||||||||||||| ||||||||||    
T  20093949 cagaagaaacacctcttaaatggatgaaggttctacagaaatgaaagaaacctccttgttctgagtgtata 20093879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 29546191 - 29546439
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  | ||||| | ||||| ||| ||||||||||||    |||||||||||||||||||||||||||||| ||||||||| |       ||     
T  29546191 tagtgtaaacgagaagtttgctgagagttatagaataaggactacagtagtggatttccttcctggcttggtagccccgagagtaggtgt-------act 29546283  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     || |||||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||| |||||||   |||||  || |||||| | || |||    
T  29546284 gaattgggtcaacaaactcactgtgttctttactttcttgtcatttatttttttgtttttatttctgtttattttgtgatgttggaacattgaacggaac 29546383  T
Q  219 attgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||  ||||   |||||||| |||| || |||||||||||| |||||||||||||||    
T  29546384 attataaacgttgaaacatcttaca-aacatattaaaacaaatgtgctagaatttca 29546439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 10279907 - 10279761
Alignment:
Q  35 ggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||| ||||||||||||     ||| ||||||||||||||||||||||||| ||||||||| |||||||| || |||| ||||||    
T  10279907 ggagtttgctgagagctatagaataaggactacactggtgaatttccttcctggcttggtagcccc-agagtaggtgtgtttgtcgccgaactaggtcaa 10279809  T
Q  131 caaactcattgcgtt-ctttactttcctgtcatttattttcttgtttt 177  Q
    ||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  10279808 caaactcattgtgttcctttactttcttgtcatttactttcttgtttt 10279761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 26133016 - 26133118
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||| ||||||||||||| ||  ||||||||| ||||||||||    
T  26133016 agtggatttccttcctggcttgatagcccccagagtaggtgtctttgtcaccgaactgggttaacaaactcattgtgtcttttactttcttgtcatttat 26133115  T
Q  167 ttt 169  Q
    |||    
T  26133116 ttt 26133118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 14926749 - 14926596
Alignment:
Q  26 tgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaa 121  Q
    |||||||  ||||||| | ||||||||||||||||||||||    ||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  14926749 tgtaaacgaggagtttgctgagagctattgaataaggactacactagtagatttccttcttggcttggtagcccccagagtaggtgtgtctgtcaccaaa 14926650  T
Q  122 ctgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtt 175  Q
    |||||| ||||||||  ||| |   |||| |||| ||||||||| |||||||||    
T  14926649 ctgggttaacaaacttgttgtgccatttaatttcttgtcatttactttcttgtt 14926596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 15350215 - 15350062
Alignment:
Q  26 tgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaa 121  Q
    |||||||  ||||||| | ||||||||||||||||||||||    ||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  15350215 tgtaaacgaggagtttgctgagagctattgaataaggactacactagtagatttccttcttggcttggtagcccccagagtaggtgtgtctgtcaccaaa 15350116  T
Q  122 ctgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtt 175  Q
    |||||| ||||||||  ||| |   |||| |||| ||||||||| |||||||||    
T  15350115 ctgggttaacaaacttgttgtgccatttaatttcttgtcatttactttcttgtt 15350062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 42636352 - 42636235
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||| ||||||| | ||||||||| ||||||||||||    |||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42636352 tagtgtaaacaaggagtttgctgagagctatagaataaggactacactagtggatttccttccttgcttggtagcctccagagtaggtatgtttgtcacc 42636253  T
Q  119 aaactgggtcaacaaact 136  Q
     |||| ||| ||||||||    
T  42636252 gaacttggttaacaaact 42636235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 3290723 - 3290856
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||     
T  3290723 aggtcctaggtcatatagtgaaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagcccccagagtt 3290822  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactca 138  Q
    |||    ||| ||||||||||||| ||||||||||    
T  3290823 ggtgacgttg-caccaaactgggttaacaaactca 3290856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 10658488 - 10658371
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    |||||||||||||||||||||||||||| ||||||||||| ||||||||||     
T  10658488 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggatttccttcctggcttggtagcctccagagtaggtgtgtttgtcacg 10658389  T
Q  119 aaactgggtcaacaaact 136  Q
     |||||||| ||||||||    
T  10658388 gaactgggttaacaaact 10658371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 7586632 - 7586698
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  7586632 agtggatttccttcctggcttggtagcccc-agagtaggtatgtttgtcaccgaactgggtcaacaaa 7586698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 15 - 275
Target Start/End: Complemental strand, 12325926 - 12325674
Alignment:
Q  15 aggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgt 110  Q
    |||||||| ||||||||   ||||||| | ||||||| |||||||| |||||    ||||||||||||||||||||||            |||||| |||    
T  12325926 aggtcataaagtgtaaatgaggagtttgctgagagcttttgaataatgactacactagtggatttccttcctggcttg------------gtaggtgtgt 12325839  T
Q  111 ttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacatta 210  Q
    |||||||| ||||  |||||||||||||||  |||||||||||||| |||||||| |||||||||||||||| ||||||   | ||||  || ||||||     
T  12325838 ttgtcaccgaactaagtcaacaaactcattttgttctttactttccagtcatttactttcttgtttttatttctgtttacttcatgatgttggaacattg 12325739  T
Q  211 atcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    | || |||||||||||     |||||||||||| || || ||||||||||||   ||||||||||    
T  12325738 aacggaacattgcaaatgttaaaacatcatacagaacatcttaaaacaagtgcattagaatttca 12325674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 42782875 - 42782773
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||||| || ||||  ||||||| | ||||||||||||||||||||||    ||||||||| |||||||||||||||||||||||||||    
T  42782875 aggtcctaggtcatatattgcaaacgaggagtttgctgagagctattgaataaggactacactagtggattttcttcctggcttggtagcccccagagta 42782776  T
Q  104 ggt 106  Q
    |||    
T  42782775 ggt 42782773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 48797658 - 48797759
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  48797658 aggtcctaggtcat-tagtgcaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagcccccagagta 48797756  T
Q  104 ggt 106  Q
    |||    
T  48797757 ggt 48797759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 24902163 - 24902059
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    |||||||||||||||||||||||||||||| | | ||||| ||||||||||  ||||||||||||||||||  ||| |  ||||||||| |||||||||     
T  24902163 agtggatttccttcctggcttggtagcccctataataggtgtgtttgtcactgaactgggtcaacaaactctgtgcct--tttactttcttgtcatttac 24902066  T
Q  167 tttcttg 173  Q
    |||||||    
T  24902065 tttcttg 24902059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 30226205 - 30226109
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga 100  Q
    ||||| |||||||||||||| ||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||| ||||||||||||||||    
T  30226205 aggtcctaggtcatatagtgcaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctgacttggtagcccccaga 30226109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 14984784 - 14984689
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||| ||||| |||||||||||||   ||||| ||||||||||||||||    |||||||||||||||||||||| |||||||||||||||||    
T  14984784 taggtcat-tagtgcaaacagggagtttgttgagagatattgaataaggactacactagtggatttccttcctggcttgatagcccccagagtaggt 14984689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 15414395 - 15414300
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||| ||||| |||||||||||||   ||||| ||||||||||||||||    |||||||||||||||||||||| |||||||||||||||||    
T  15414395 taggtcat-tagtgcaaacagggagtttgttgagagatattgaataaggactacactagtggatttccttcctggcttgatagcccccagagtaggt 15414300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 23057263 - 23057196
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||||||    
T  23057263 agtgaatttccttcctggcttggtagccctcagagtaggtgtgtttgtcaccgaactgggttaacaaa 23057196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 15436168 - 15436066
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| || |||||| |||||||||  ||||||| | ||||||| ||||||||||||||    ||||||||||||| |||||||||||||||| ||||||    
T  15436168 aggtcctaagtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactagtggatttcctttctggcttggtagcccctagagta 15436069  T
Q  104 ggt 106  Q
    |||    
T  15436068 ggt 15436066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 20925155 - 20925305
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  |||||||   ||||||||| |||||||||| ||    ||||||||||||| |||||    ||| | || ||||||| ||||| |||||    
T  20925155 tagtgtaaacgaggagtttgttgagagctatagaataaggacgaaactagtggatttccttcttggct----agctctcatagtaggtgtgtttatcacc 20925250  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg 173  Q
     |||||||||||||||||||||| ||||||||||||  |||  ||||||||||||    
T  20925251 gaactgggtcaacaaactcattgtgttctttacttttttgttttttattttcttg 20925305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 31269156 - 31269224
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    |||||||||||||| |||||||||||||||| ||||||||  |||||||||| |||||||| |||||||    
T  31269156 agtggatttccttcatggcttggtagcccccggagtaggtgagtttgtcaccgaactgggttaacaaac 31269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 20596930 - 20596993
Alignment:
Q  71 gatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||    
T  20596930 gatttccttcttggcttggtagcccccagagtaggtgtgtttgtcaccgaactcggttaacaaa 20596993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 4794643 - 4794729
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||||||  ||||||||| ||||||||  ||||||||||||    |||||||||||| |||||||||||||||||||||||||||    
T  4794643 tagtgtaaacgaggagttttccgagagctagagaataaggactacactagtggatttcct-cctggcttggtagcccccagagtaggt 4794729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 7508492 - 7508426
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||||||| | |||||||| |||||    
T  7508492 agtggatttccttcctggcttggtagccccaaaagtaggtgtgtttgtcatcgaactgggttaacaa 7508426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 9894168 - 9894226
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgg 125  Q
    ||||||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||    
T  9894168 agtggatttccttactgacttggtagtccccagagtaggtgtgtttgtcaccaaactgg 9894226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 10251493 - 10251431
Alignment:
Q  71 gatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| |||||    
T  10251493 gatttccttcctggcttggtagcctccagagtaggtgtgtttatcaccgaactgggttaacaa 10251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23082875 - 23082941
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||| |||||||||||||| |||||    
T  23082875 agtggatttccttcctgacttggtagcccgtagagtaggtgtgtttctcaccaaactgggttaacaa 23082941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 11628759 - 11628657
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| |  |||||||||||||||||||||    |||||||||||||||| | |||||| |||||| ||||    
T  11628759 aggtcctaggtcatatagtgcaaacgaggagtttgctaagagctattgaataaggactacaagagtggatttccttcctagtttggtaacccccaaagta 11628660  T
Q  104 ggt 106  Q
    |||    
T  11628659 ggt 11628657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 15506387 - 15506285
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| | |||||||  ||||||| | ||||||| ||||||||||||||    ||||||||||| | |||||||||||||||| ||||||    
T  15506387 aggtcctaggtcataaaatgtaaacgaggagtttgctgagagcttttgaataaggactacactagtggatttccattctggcttggtagcccctagagta 15506288  T
Q  104 ggt 106  Q
    |||    
T  15506287 ggt 15506285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 11407058 - 11407118
Alignment:
Q  74 ttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||||||||||| |||||||||||||||||||| ||||||||| | |||||||| ||||||    
T  11407058 ttccttcctggcatggtagcccccagagtaggtgtgtttgtcatctaactgggttaacaaa 11407118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 21260570 - 21260503
Alignment:
Q  69 tggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaact 136  Q
    ||||||| ||||||   ||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  21260570 tggattttcttcctaagttggtagcccccagagtaggtgtgtttgtcaccgaactggatcaacaaact 21260503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 23956934 - 23956831
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    ||||||||| |||||||||||||||||| | | ||||| | ||||||||||| |||| |||||||||||||  || |   ||||||||| |||| |||||    
T  23956934 agtggattttcttcctggcttggtagcctctaaagtagatgtgtttgtcaccgaactaggtcaacaaactctctgtgccttttactttcttgtcttttat 23956835  T
Q  167 tttc 170  Q
    ||||    
T  23956834 tttc 23956831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 11560571 - 11560646
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||| | ||||||||||||||||| ||||    || ||||||||||||| |||||||||||||||||||||||    
T  11560571 ggagtttactgagagctattgaataagcactacaatagcggatttccttcctagcttggtagcccccagagtaggt 11560646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 7620163 - 7620098
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||||||||||||||||||    ||||||||||||||||| |||||||||| ||| |||||||    
T  7620163 gagagctattgaataaggactacactagtggatttccttcctgacttggtagcctccaaagtaggt 7620098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 2076562 - 2076523
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  2076562 agtggatttccttcatggcttggtagcccccagagtaggt 2076523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 2082981 - 2082942
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  2082981 agtggatttccttcatggcttggtagcccccagagtaggt 2082942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 10309591 - 10309650
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactggg 126  Q
    |||||| ||||||| |||||||||||||||||||||||||  |||||||||  |||||||    
T  10309591 agtggacttccttcttggcttggtagcccccagagtaggtgcgtttgtcactgaactggg 10309650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 20588813 - 20588875
Alignment:
Q  71 gatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||| ||||| || ||||||    
T  20588813 gatttccttcctggcttggtagcccccaaagta-gtttgtttgtcaccgaactgagttaacaaa 20588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 14687424 - 14687358
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||| ||||||||||| ||||||||||| ||| ||||||| ||||||||||| |||| ||| |||||    
T  14687424 agtgaatttccttcctagcttggtagcctccatagtaggtgtgtttgtcaccgaactaggttaacaa 14687358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 9566960 - 9566861
Alignment:
Q  68 gtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttatt 167  Q
    ||||||||||| |||||||||||||||||| |||||||||   ||| |||| |||||||| |||||||||  || | | ||||||||| |||| ||||||    
T  9566960 gtggatttcct-cctggcttggtagccccctgagtaggtaacgttg-caccgaactgggttaacaaactctctgtgctttttactttcttgtcttttatt 9566863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 6045377 - 6045312
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||| |||||||||||||||| ||||||||||||  ||||| ||||| |||| ||| |||||    
T  6045377 agtggattttcttcctggcttggtag-ccccagagtaggcgtgtttttcaccgaactaggtaaacaa 6045312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 19353187 - 19353122
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||||||||||||| |||||| ||||||| |||||||||| || |||||| | |||||||| |||||    
T  19353187 agtggatttccttcttggcttagtagccctcagagtaggtgtg-ttgtcatcgaactgggttaacaa 19353122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 97
Target Start/End: Complemental strand, 24813982 - 24813952
Alignment:
Q  67 agtggatttccttcctggcttggtagccccc 97  Q
    |||||||||||||||||||||||||||||||    
T  24813982 agtggatttccttcctggcttggtagccccc 24813952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 5299204 - 5299175
Alignment:
Q  67 agtggatttccttcctggcttggtagcccc 96  Q
    ||||||||||||||||||||||||||||||    
T  5299204 agtggatttccttcctggcttggtagcccc 5299175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 23174982 - 23175011
Alignment:
Q  67 agtggatttccttcctggcttggtagcccc 96  Q
    ||||||||||||||||||||||||||||||    
T  23174982 agtggatttccttcctggcttggtagcccc 23175011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 2e-83; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 17 - 275
Target Start/End: Complemental strand, 10190997 - 10190735
Alignment:
Q  17 gtcatatagtgtaaacagggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagtaggtatgttt 112  Q
    ||||||||||||||||  ||||||| |  |||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||| |||||    
T  10190997 gtcatatagtgtaaacgaggagtttgcttagagctattgaataaggactacactggtggatttccttcctggcttggtagcccccagagtaggtgtgttt 10190898  T
Q  113 gtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaat 212  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||    
T  10190897 gtcaccgaactgggtcaacaaactcattgttttctttactttcctgtcatttattttcttgtttttatttttgtttatcgcttgatgttgaaacattaat 10190798  T
Q  213 cgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    | ||||||||||||  | ||||||||||||| || ||||||||||||||| ||||||||||||    
T  10190797 cttaacattgcaaatgctgaaacatcatacagaacatattaaaacaagtgcgctagaatttca 10190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 25116945 - 25116672
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggt--agcccccagag 101  Q
    ||||| |||||||||||||||||||  | ||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||  |||||||||||    
T  25116945 aggtcctaggtcatatagtgtaaacgagaagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtgtagcccccagag 25116846  T
Q  102 taggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataat 201  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||  |    
T  25116845 taggtgtgtttgtcaccgaactgggtcaataaactcattgtgttctttactttcctgtcgtttattttcttatttttatttctgtttatcgcgtgatgtt 25116746  T
Q  202 gaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||||||||||| |||  | ||||||| ||||| ||  |||||||||||||||||||||||||||    
T  25116745 gaaacattaatcgtaacattgtaaatgctgaaacattatacagaacgtattaaaacaagtgtgctagaatttca 25116672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 16384010 - 16383738
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  |||||||   ||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||    
T  16384010 aggtcctaggtcatatagtgtaaacgaggagtttgttgagagctattgaataaggactacactagtggatttccttcctggcttggaagcccccagagta 16383911  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgt-ttttatttatgtttatcacgtgataatg 202  Q
    ||| ||||||||||| |||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||| |||||||| |||||||| ||||||  ||    
T  16383910 ggtgtgtttgtcaccgaactaggtcaacaatctcattgtgttctttaatttcctgtcttttattttcttgttttttatttctgtttatcgcgtgatgttg 16383811  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||||||||| ||||| ||  |||||| |||| || ||||||||||||||| ||||||||||||    
T  16383810 aaacattaatcgtaacattacaaacgccataacatcttacagaacatattaaaacaagtgcgctagaatttca 16383738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 23400234 - 23400499
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||||||      ||    
T  23400234 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagccc------ta 23400327  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt-cttgtttttatttatgtttatcacgtgataatg 202  Q
    ||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||| ||||||||||  ||    
T  23400328 ggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttactttcatgtcttttatttttcttgtttttatttatgtt-atcacgtgatgttg 23400426  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||| ||||||| ||||  ||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  23400427 aaacattaatcataacattacaaatgccgtaacatcatacagagcatattaaaacaagtgtgctagaatttca 23400499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 28019418 - 28019200
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatg 109  Q
    |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||| | || ||    
T  28019418 taggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcttggcttggtagcccccagagcatgtgtg 28019319  T
Q  110 tttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcattta-ttttctt-gtttttatttatgtttatcacgtgataatgaaaca 207  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||  ||||||||| || ||||| ||||||  |||||||    
T  28019318 tttgtcaccgaactgggtcaacaaactcattgtgttatttactttcctgtcatttacttttcttcttttttatttctg-ttatcgcgtgatgttgaaaca 28019220  T
Q  208 ttaatcgtaacattgcaaac 227  Q
    |||||||||||||| |||||    
T  28019219 ttaatcgtaacattacaaac 28019200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 45 - 275
Target Start/End: Original strand, 15162564 - 15162798
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||| ||| ||||||||||||    |||||||||||||| ||| |||| |||||||||||||||| ||||||||||| |||| |||||||||||| |||    
T  15162564 gagagttatagaataaggactacactagtggatttccttcttgggttggcagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaacttatt 15162663  T
Q  141 gcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcac-gtgataatgaaacattaatcgtaacattgcaaactccgaaacatca 239  Q
    | ||  |||||||||||| ||||||||||||||||||||||| |||||| |||  ||||  || ||||||||||| ||||| ||||||   ||||||||     
T  15162664 gtgtcttttactttcctgccatttattttcttgtttttatttctgttta-cactatgatgttggaacattaatcgaaacatcgcaaacgttgaaacatct 15162762  T
Q  240 tacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||| |||||||||||||| |||||||||||||    
T  15162763 tacataacatattaaaacaagtatgctagaatttca 15162798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 33899028 - 33899193
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  | ||||| |  ||||||||||||| |||||||    ||||||||| ||||||| |||||||||||| ||||||    
T  33899028 aggtcctaggtcatatagtgtaaacgagaagtttgctaagagctattgaatgaggactacaccagtggattttcttcctgacttggtagcccctagagta 33899127  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt 169  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33899128 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcatttatttt 33899193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 35 - 275
Target Start/End: Complemental strand, 10724352 - 10724108
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||| ||||||||||||    |||| |||||||||||||||| |||||||||| ||||||| ||||||||||| |||| ||||||    
T  10724352 ggagtttgctgagagctatagaataaggactacactagtgaatttccttcctggctttgtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaa 10724253  T
Q  131 caaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactcc 230  Q
    |||||||| ||  ||||||| |||| |||||||||||||||||||||||||| |||||||   |||||  || |||||| | || |||||| |||||       
T  10724252 caaactcactgtattctttaatttcttgtcatttattttcttgtttttatttctgtttattttgtgatgttggaacattgaacggaacattccaaacggt 10724153  T
Q  231 gaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
     ||||||| |||| || ||||||||||||||| | ||||||||||    
T  10724152 aaaacatcttacaaaacatattaaaacaagtgcgttagaatttca 10724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 35 - 275
Target Start/End: Complemental strand, 10938121 - 10937877
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||| ||||||||||||    |||| |||||||||||||||| |||||||||| ||||||| ||||||||||| |||| ||||||    
T  10938121 ggagtttgctgagagctatagaataaggactacactagtgaatttccttcctggctttgtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaa 10938022  T
Q  131 caaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactcc 230  Q
    |||||||| ||  ||||||| |||| |||||||||||||||||||||||||| |||||||   |||||  || |||||| | || |||||| |||||       
T  10938021 caaactcactgtattctttaatttcttgtcatttattttcttgtttttatttctgtttattttgtgatgttggaacattgaacggaacattccaaacggt 10937922  T
Q  231 gaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
     ||||||| |||| || ||||||||||||||| | ||||||||||    
T  10937921 aaaacatcttacaaaacatattaaaacaagtgcgttagaatttca 10937877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 21478227 - 21477957
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||||| ||||||||||||||    |||| ||||||||||||||||||||||| ||||||||    
T  21478227 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactagtgtatttccttcctggcttggtagcctccagagta 21478128  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    |||    ||| |||| |||||||| ||||||||||  | ||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||  ||     
T  21478127 ggtgacgttg-caccgaactgggttaacaaactcaccgtgttctttactttcttgtcatttattttcttgtttttatttctggttatcgcgtgatgttgg 21478029  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||| |  || ||||  |||||    |||||||||||| ||  |||||||||||||| ||||||||||||    
T  21478028 aacattgaatgtgacatcacaaacattaaaacatcatacagaacgtattaaaacaagtgcgctagaatttca 21477957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 18618162 - 18618334
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatg 109  Q
    |||||||||||||||||||  |||||||   ||||| ||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||    
T  18618162 taggtcatatagtgtaaacgaggagtttgttgagagatattgaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtatg 18618261  T
Q  110 tttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcattta-ttttcttgtttttatt 181  Q
    ||||||||| |  ||| |||||||||||| |  ||||||||||||| |||| |||| ||||||||||| ||||    
T  18618262 tttgtcaccgacttggctcaacaaactcactatgttctttactttcttgtcgtttatttttcttgtttatatt 18618334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 531 - 664
Target Start/End: Original strand, 11450873 - 11451006
Alignment:
Q  531 gaaatcaaagaaacctccttgttatgagtgtatacaaaacagtatgtattcctactttgttccaaaagctggaaaagctaaggttctgaacaagtcataa 630  Q
    |||| |||||||| |||||||||||||||| ||||||||  || |||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  11450873 gaaaacaaagaaaactccttgttatgagtgcatacaaaagggtttgtattcccactttgttccaaaggctgaaaaagctaaggttctgaacaagtcagaa 11450972  T
Q  631 tctatgaacttagagtcgaaggttctgatcaaat 664  Q
    |||  || ||||||||| ||||||||||||||||    
T  11450973 tctgagaccttagagtctaaggttctgatcaaat 11451006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 531 - 664
Target Start/End: Complemental strand, 11543862 - 11543729
Alignment:
Q  531 gaaatcaaagaaacctccttgttatgagtgtatacaaaacagtatgtattcctactttgttccaaaagctggaaaagctaaggttctgaacaagtcataa 630  Q
    |||| ||||||||||||||||||||||||| ||||||||  || |||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  11543862 gaaaacaaagaaacctccttgttatgagtgcatacaaaagggtttgtattcccactttgttccaaaggctgaaaaagctaaggttctgaacaagtcagaa 11543763  T
Q  631 tctatgaacttagagtcgaaggttctgatcaaat 664  Q
    |||  || |||| | || ||||||||||||||||    
T  11543762 tctgagaccttacaatctaaggttctgatcaaat 11543729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 115 - 275
Target Start/End: Complemental strand, 8163791 - 8163631
Alignment:
Q  115 caccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcg 214  Q
    |||| |||||||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||  || |||||| | ||    
T  8163791 caccgaactgggttaacaaactcactgtgttctttactttcttgtcatttattttcttgtttttatttttgtttatcgcgtgatgttggaacattgaacg 8163692  T
Q  215 taacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||   ||||    |||||||||||||||  |||||||||||||| ||||||||||||    
T  8163691 taacatcataaacgttaaaacatcatacataacgtattaaaacaagtgcgctagaatttca 8163631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 15700365 - 15700502
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagccccca-gagtaggtatgtttgtcac 117  Q
    ||||||||||  ||||||| | || |||||| ||||||||||||    |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  15700365 tagtgtaaacgaggagtttgctgaaagctatagaataaggactacactagtggatttccttcctggcttggtagcccccaagagtaggtgtgtttgtcac 15700464  T
Q  118 caaactgggtcaacaaactcattgcgttctttactttc 155  Q
    | ||||||||||||||||||| || |||||||||||||    
T  15700465 cgaactgggtcaacaaactcactgtgttctttactttc 15700502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 13399359 - 13399477
Alignment:
Q  24 agtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacca 119  Q
    |||||||||  ||||||| | ||||||| | ||||||||||||    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||     
T  13399359 agtgtaaacgaggagtttgctgagagctttagaataaggactacactagtggattttcttcctggcttggtagcccctagagtaggtgtgtttgtcaccg 13399458  T
Q  120 aactgggtcaacaaactca 138  Q
    |||||||||||||||||||    
T  13399459 aactgggtcaacaaactca 13399477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 19659558 - 19659432
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||||| ||||||||||||||    |||||||||||||||||||||||| ||||||||  ||    
T  19659558 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactagtggatttccttcctggcttggtggcccccagctta 19659459  T
Q  104 ggtatgtttgtcaccaaactgggtcaa 130  Q
    ||| ||||||||||| || ||||||||    
T  19659458 ggtgtgtttgtcaccgaattgggtcaa 19659432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 9069050 - 9068933
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | |||||| || ||||||||||||    |||||||||||||||| ||||||||||| ||||||||||| ||||||| |||    
T  9069050 tagtgtaaacgaggagtttgctgagagcaatagaataaggactacactagtggatttccttcctcgcttggtagcctccagagtaggtgtgtttgttacc 9068951  T
Q  119 aaactgggtcaacaaact 136  Q
     |||||||| ||||||||    
T  9068950 gaactgggttaacaaact 9068933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 11325185 - 11325287
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  |||||||   ||||||||||||||||||||||    |||||||||||||||||||||||||||| |||||| |    
T  11325185 aggtcctaggtcatatagtgcaaacgaggagtttgttgagagctattgaataaggactacactagtggatttccttcctggcttggtagcctccagagca 11325284  T
Q  104 ggt 106  Q
    |||    
T  11325285 ggt 11325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 33899402 - 33899491
Alignment:
Q  184 tgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaattt 273  Q
    |||||||| ||||||  | ||||||||||| ||||||||||||| | ||||||||||||| ||  |||||||||||||||||||||||||    
T  33899402 tgtttatcgcgtgatgttaaaacattaatcataacattgcaaacgctgaaacatcatacagaacctattaaaacaagtgtgctagaattt 33899491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 33738040 - 33737973
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||||||| ||||||    
T  33738040 agtggatttccttcctggcttggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 33737973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 41785491 - 41785385
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    |||||||||||||| ||||||||||||||||  |||| || ||||||||||  ||||||||||||||||||  |  |   ||||||||| ||||||||||    
T  41785491 agtggatttccttcttggcttggtagcccccgtagtatgtgtgtttgtcacagaactgggtcaacaaactctctatgcattttactttcttgtcatttat 41785392  T
Q  167 tttcttg 173  Q
    |||||||    
T  41785391 tttcttg 41785385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 25354676 - 25354777
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||| ||||||| | ||||| ||||||||| | ||||    |||||||||||||||||||||||||||||||||||||    
T  25354676 aggtcctaggtcat-tagtgcaaacaaggagtttgctgagagatattgaatacgaactacactagtggatttccttcctggcttggtagcccccagagta 25354774  T
Q  104 ggt 106  Q
    |||    
T  25354775 ggt 25354777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 46741790 - 46741891
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||| ||||  ||||||| | ||||||||||||||||||| ||    |||||||||||||| ||||||||||||||||||||||    
T  46741790 aggtcctaggtcata-agtgcaaacgaggagtttgctgagagctattgaataaggattacactagtggatttccttcatggcttggtagcccccagagta 46741888  T
Q  104 ggt 106  Q
    |||    
T  46741889 ggt 46741891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 32861704 - 32861637
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    ||||||||| ||||||| |||||||||||| ||||||||| ||||||||||| |||||| ||||||||    
T  32861704 agtggattttcttcctgacttggtagcccctagagtaggtgtgtttgtcaccgaactggatcaacaaa 32861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 22555062 - 22554987
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||||||  ||||||||||    
T  22555062 ggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagccttcagagtaggt 22554987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 23541336 - 23541261
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||| | ||||||||||||||| ||||||    |||||||||||||||||||||||||||| |||||||||||    
T  23541336 ggagtttgctgagagctattgaatacggactacactagtggatttccttcctggcttggtagcctccagagtaggt 23541261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 24143253 - 24143152
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  ||| ||| | ||||||||||||||| ||||||    ||||||||||||||||| |||||||||||||||||||    
T  24143253 aggtcctaggtcat-tagtgcaaacgaggattttgctgagagctattgaatacggactacactagtggatttccttcctgacttggtagcccccagagta 24143155  T
Q  104 ggt 106  Q
    |||    
T  24143154 ggt 24143152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 33746068 - 33745918
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||| ||| | |||||||||  |||||||||||    |||||||||||||||| ||||||||||| ||| ||||||| | |||||||||    
T  33746068 tagtgtaaacgaggaatttactgagagctataaaataaggactacactagtggatttccttcctagcttggtagcctccatagtaggtgtttttgtcacc 33745969  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttatttt 169  Q
     ||||| || ||||||||  ||| |   ||||||||| |||| ||||||||    
T  33745968 gaactgtgttaacaaacttgttgtgccttttactttcttgtcttttatttt 33745918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 50907908 - 50907840
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    ||||||||| ||||||| ||||||||||| |||||||||| ||||||||||| ||||| || |||||||    
T  50907908 agtggattttcttcctgacttggtagccctcagagtaggtgtgtttgtcaccgaactgagttaacaaac 50907840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 2679906 - 2679839
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    ||||||||||||||||  |||||| ||||||||||||||| |||||||||||  ||||||| ||||||    
T  2679906 agtggatttccttcctaacttggttgcccccagagtaggtgtgtttgtcaccgtactgggttaacaaa 2679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 10198354 - 10198418
Alignment:
Q  68 gtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||| ||| |||||    
T  10198354 gtggatttccttcctggcttggtag-ccctagagtaggtgtgtttgtcaccgaactaggttaacaa 10198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 13268903 - 13268870
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccaga 100  Q
    ||||||||||||||||| ||||||||||||||||    
T  13268903 agtggatttccttcctgacttggtagcccccaga 13268870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 16655441 - 16655486
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgttt 112  Q
    |||||||||||||| ||||||| ||||||| ||||||||| |||||    
T  16655441 agtggatttccttcttggcttgttagcccctagagtaggtgtgttt 16655486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 146; Significance: 2e-76; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 50131 - 50401
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||| |||   ||||||||||||||||||||||    ||||||||||||||||| |||||||||||| ||||||    
T  50131 aggtcgtaggtcatatagtgtaaacgaggattttgttgagagctattgaataaggactacactagtggatttccttcctgacttggtagcccctagagta 50230  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg-tttttatttatgtttatcacgtgataatg 202  Q
    ||| ||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||| ||||||||| |||||||| ||||||  ||    
T  50231 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttcatgtcatttactttcttgttttttatttctgtttatcgcgtgatgttg 50330  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaattt 273  Q
    ||||||||||||||||||||||||| ||  ||||||||||| ||  |||||||||||||||||||||||||    
T  50331 aaacattaatcgtaacattgcaaacgccttaacatcatacagaacgtattaaaacaagtgtgctagaattt 50401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 61513 - 61784
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||||||||||||||  |||||| | ||||||||||||||||| ||||    |||||||||||||| ||||||||||||||||||||||    
T  61513 aggtcttaggtcatatagtgtaaacaatgagtttgctgagagctattgaataagaactacactagtggatttccttcttggcttggtagcccccagagta 61612  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgttttt-atttatgtttatcacgtgataatg 202  Q
      | ||||||||||| |||||||||||||||||||||| | | ||||||||||||||||||| |||||||||||| |||| |||||||| ||||||  ||    
T  61613 a-tgtgtttgtcaccgaactgggtcaacaaactcattgtgctatttactttcctgtcatttactttcttgttttttatttttgtttatcgcgtgatgttg 61711  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||| ||||||||||||||||||||| ||| ||||||||||| || |||||||||||| |||||||||||||||    
T  61712 aaatattaatcgtaacattgcaaacgccgtaacatcatacaaaacatattaaaacaaatgtgctagaatttca 61784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 144; Significance: 3e-75; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 2398 - 2670
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||||    | |||| ||||||||||||||| ||||||| | ||||    
T  2398 aggtcctaggtcatatagtgtaaacggggagtttgctgagagctattgaataaggactacactattggacttccttcctggcttgatagcccctaaagta 2497  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| || |||||||| || ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |   |||    
T  2498 ggtgtgcttgtcaccgaaatgggtcaacaaactcattgtgttctttactttcctatcatttattttcttgtttttatttatgtttatcacgttaggttga 2597  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
    ||||||| | ||||| |||||||| |  ||| |||||||||||  ||||||||||||||||||||||||||||    
T  2598 aacattagttgtaactttgcaaacgctaaaaaatcatacataacgtattaaaacaagtgtgctagaatttcag 2670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 140; Significance: 8e-73; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 110296 - 110568
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||| |||||||||||| ||||||    
T  110296 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctgacttggtagcccctagagta 110395  T
Q  104 ggtatgttt-gtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatg 202  Q
     || ||||| |||||| |||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||  |||||  ||    
T  110396 tgtgtgttttgtcaccgaactggttcaacaaactcattgtgttatttactttcctgtcatttactttcttgtttttatttctgtttatcgagtgatgttg 110495  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||||||||||||| | | ||||||||||||||||  |||||||||||||| | || |||||||    
T  110496 aaacattaatcgtaacattgcaatcgctgaaacatcatacataacgtattaaaacaagtgcggtaaaatttca 110568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 137; Significance: 5e-71; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 37125 - 36853
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||| ||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||    
T  37125 aggtcctaggtcatatggtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagcctccagagta 37026  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttg-tttttatttatgtttatcacgtgataatg 202  Q
    ||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||  | |||||||||||| |||||| || |||||||| | ||||  ||    
T  37025 ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgtt-tttactttcctaacttttattttcttgttttttaattttgtttatcgcatgattttg 36927  T
Q  203 aaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
    |||||||||||||||||||||||||  || ||||||||| | || |||||||||||||||| ||||||||||||    
T  36926 aaacattaatcgtaacattgcaaacgtcgtaacatcatatagaacatattaaaacaagtgtcctagaatttcag 36853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 5e-68; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 23541450 - 23541722
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||| ||||||||||||| | |||||| | ||||||||||||||||| ||||    ||||||||||||||| || ||||||||||||||||||    
T  23541450 aggtcctaggtaatatagtgtaaacggcgagtttgctgagagctattgaataagtactacactagtggatttccttcccggtttggtagcccccagagta 23541549  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||  ||     
T  23541550 ggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttacattcctgtcatttattttcttgtttttatttctgcttatcgcgtgatgttgg 23541649  T
Q  204 aacattaatcgt-aacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||| ||||| ||||||||||||    ||||||||||||||| ||||||||| ||||| | ||||||||||    
T  23541650 aacattgatcgtaaacattgcaaacgttaaaacatcatacataacatattaaaataagtgcggtagaatttca 23541722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 11221326 - 11221578
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta-agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaa 121  Q
    ||||||||||  ||||||| | ||||||||| |||||||||||| | |  ||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  11221326 tagtgtaaacgaggagtttgctgagagctatagaataaggactacact--atttccttcctggtttggtagcccccagagtaggtgtgtttgtcaccgaa 11221423  T
Q  122 ctgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacatt 221  Q
    || |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||  | ||||  || |||||| | || ||||||    
T  11221424 ctaggtcaacaaactcactgtgttctttactttcctgtcatttattttcttgtttttatttctgtttatttcatgatgttggaacattgaacggaacatt 11221523  T
Q  222 gcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
    | ||||    ||||||| |||| || | ||||||||||||| |||||||||||||    
T  11221524 gaaaacgtttaaacatcgtacaaaacaaattaaaacaagtgcgctagaatttcag 11221578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 23 - 273
Target Start/End: Complemental strand, 33977163 - 33976909
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||| ||||||| | ||||||||| ||||||||||||    ||||||||||||| ||| ||||||||||||||||||||||  |||||| |||    
T  33977163 tagtgtaaacaaggagtttgctgagagctatagaataaggactacactagtggatttcctttctgacttggtagcccccagagtaggtgcgtttgttacc 33977064  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaac 218  Q
     |||||||||||||||||||  |  |||||||||||| ||||||||||||||||||||| |||| |||||||  ||||||  || |||||| | || |||    
T  33977063 gaactgggtcaacaaactcacagtattctttactttcttgtcatttattttcttgttttgatttctgtttatttcgtgatgttggaacattgaacggaac 33976964  T
Q  219 attgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaattt 273  Q
    ||| ||||    |||||||| |||| || ||||||||||||||||||||||||||    
T  33976963 attacaaatattgaaacatcttacaaaacatattaaaacaagtgtgctagaattt 33976909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 45133721 - 45133597
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttat 166  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| || || |||||||||| |||| |||||    
T  45133721 agtggatttccttcctggcttgatagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcaatgtgtcctttactttcttgtcgtttat 45133622  T
Q  167 tttcttgtttttatttatgtttatc 191  Q
    |||||||||||||||| ||||||||    
T  45133621 tttcttgtttttatttctgtttatc 45133597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 25240525 - 25240254
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||| || |||||||| | ||||||| | ||||||| ||||||||||||||     ||||||||||||||||| ||||||||||||   |||    
T  25240525 aggtcctaggtcgtaaagtgtaaagaaggagtttgctgagagcttttgaataaggactacactggtggatttccttcctggtttggtagcccccttggta 25240426  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| |||||||| |||||||||| ||     ||||||||| |||||||||||| ||||||||||||| ||||||   ||||||| ||     
T  25240425 ggtgtgtttgtcaccgaactgggtaaacaaactcaatgtaccttttactttcttgtcatttatttccttgtttttatttttgtttacttcgtgatattgg 25240326  T
Q  204 aacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||| | || ||||||  || |   ||||||||  |||||| ||||||||||||||  ||||||||||||    
T  25240325 aacattgaacggaacattataaccgttgaaacatcgcacataacatattaaaacaagtacgctagaatttca 25240254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 110 - 275
Target Start/End: Complemental strand, 22472798 - 22472631
Alignment:
Q  110 tttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgt--ttttatttatgtttatcacgtgataatgaaaca 207  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||| |||| |||||||||||||  ||||| || ||||||||  |||||  |||||||    
T  22472798 tttgtcaccgaactgggtcaacatactcattgtgttctttactttcatgtcttttattttcttgtttttttaattctgtttatcgtgtgatgttgaaaca 22472699  T
Q  208 ttaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||||||||| ||||||    |||||||||||| ||  ||||||||||||||| |||||||||||    
T  22472698 ttaatcgtaacatcgcaaacgttaaaacatcatacagaacgtattaaaacaagtgtcctagaatttca 22472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 120 - 275
Target Start/End: Original strand, 27925578 - 27925733
Alignment:
Q  120 aactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaaca 219  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||  ||||||  ||||||||| | || ||||    
T  27925578 aactgggtcaacaaactcactgtgttctttactttcctgtcatttattttcttgtttttatttctgtttatttcgtgatgttgaaacattgaacgaaaca 27925677  T
Q  220 ttgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||| ||    |||||||  |||||| |||||||||||| || ||||||||||||    
T  27925678 ttgcatacgttaaaacatctgacataacatattaaaacaaatgcgctagaatttca 27925733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 22485247 - 22485089
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatg 109  Q
    |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||| ||||         || |||||||||||| | ||    
T  22485247 taggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggattttcttc---------ta-cccccagagtagttgtg 22485158  T
Q  110 tttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgttttt 178  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  22485157 tttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgttttt 22485089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 24092062 - 24091926
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||||  ||||||| | ||||||| | ||||||||||||    |||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  24092062 tagtgtaaacgaggagtttgctgagagctgtagaataaggactacactagtggatttccttcctggcttggtagcccctagagtaggtgtgtttgtcacc 24091963  T
Q  119 aaactgggtcaacaaactcattgcgttctttactttc 155  Q
     |||| |||||||||||||| || |||||||||||||    
T  24091962 gaactaggtcaacaaactcactgtgttctttactttc 24091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 33961814 - 33961695
Alignment:
Q  71 gatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttc 170  Q
    ||||||||||||| | ||||||||||||||||||||  |||||| ||| |||||||||||||||||||  | ||||||||||||| ||||||||||||||    
T  33961814 gatttccttcctgacgtggtagcccccagagtaggtgagtttgttaccgaactgggtcaacaaactcacagtgttctttactttcttgtcatttattttc 33961715  T
Q  171 ttgtttttatttatgtttat 190  Q
    ||||||| |||| |||||||    
T  33961714 ttgttttgatttctgtttat 33961695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 22476350 - 22476240
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    ||||||||||||||||||||||||||||| || ||||    
T  22476350 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctggcttggtagccctcaaagta 22476251  T
Q  104 ggtatgtttgt 114  Q
    ||| |||||||    
T  22476250 ggtgtgtttgt 22476240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 37155565 - 37155667
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||| ||||  ||||||| | ||||||||||||||||||| ||    |||| ||||||||||||||||||||||||||||||||    
T  37155565 aggtcctaggtcatatagtgcaaacgaggagtttgctgagagctattgaataaggattacactagtgaatttccttcctggcttggtagcccccagagta 37155664  T
Q  104 ggt 106  Q
    |||    
T  37155665 ggt 37155667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 12814694 - 12814760
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  12814694 agtgaatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccaaattgggttaacaa 12814760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 9996592 - 9996454
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaa 130  Q
    ||||||| | ||||||||| ||||||||||||    |||||||||| |||||| |||||||| | ||||||||||| ||||||||||| |||||||| ||    
T  9996592 ggagtttgctgagagctatagaataaggactacaatagtggatttcattcctgacttggtagtctccagagtaggtgtgtttgtcaccgaactgggttaa 9996493  T
Q  131 caaactcattgcgttctttactttcctgtcatttatttt 169  Q
    ||||||   || ||  ||||||||| |||| ||||||||    
T  9996492 caaacttgctgtgtcttttactttcttgtcttttatttt 9996454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 1562469 - 1562537
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||||| |||||||    
T  1562469 agtggatttccttcctggcttggtagcccccaaagtaggtgtgtttgtcgccgaactgggttaacaaac 1562537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 39081048 - 39080983
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  39081048 gagagctattgaataaggactacactagtggatttccttcctggcttggtagcccccagagtaggt 39080983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 8726937 - 8726862
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||| | ||||||||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||    
T  8726937 ggagtttgctgagagctattgaatatggactacactagtggatttccttcctggcttggtagcccccagagtaggt 8726862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 20254985 - 20255091
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac--tcattgcgttctttactttcctgtcattt 164  Q
    |||||||||||||||| ||||||||||||||| ||||  | ||||||||||| ||||||||||||||||  ||  ||| |  ||||||||| ||||||||    
T  20254985 agtggatttccttcctagcttggtagcccccatagtacatgtgtttgtcaccgaactgggtcaacaaactgtcgctgcct--tttactttcttgtcattt 20255082  T
Q  165 attttcttg 173  Q
    |||||||||    
T  20255083 attttcttg 20255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 22480934 - 22481023
Alignment:
Q  186 tttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    |||||| ||||||  |||||||||||||||||||| ||||||    ||| |||||||| || |||||||||||||||| |||||||||||    
T  22480934 tttatcgcgtgatgttgaaacattaatcgtaacatcgcaaacgttaaaatatcatacaaaacatattaaaacaagtgttctagaatttca 22481023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 33466200 - 33466301
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  | ||||| | ||||||| ||||||||||||||    ||||||||| |||||||||||||||||||||||||||    
T  33466200 aggtcctaggtcat-tagtgcaaacgagaagtttgctgagagcttttgaataaggactacactagtggattttcttcctggcttggtagcccccagagta 33466298  T
Q  104 ggt 106  Q
    |||    
T  33466299 ggt 33466301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 12240292 - 12240228
Alignment:
Q  70 ggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaa 134  Q
    ||||||||||||||| ||||||||| || |||||||| ||||||||||| |||||||| ||||||    
T  12240292 ggatttccttcctggtttggtagcctccggagtaggtgtgtttgtcaccgaactgggttaacaaa 12240228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 24384618 - 24384567
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcacc 118  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  24384618 agtggattttcttcctggcttggtagcccccagagtacgtgtgtttgtcacc 24384567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 17280007 - 17279906
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  ||||||| |  |||||||||||||| | ||||    ||||||||||||||||||||||||| |||||||||||    
T  17280007 aggtcctaggtcat-tagtgcaaacgaggagtttgcttagagctattgaatacgaactacactagtggatttccttcctggcttggtatcccccagagta 17279909  T
Q  104 ggt 106  Q
    |||    
T  17279908 ggt 17279906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 17880785 - 17880881
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtag-cccccagagtaggt 106  Q
    |||||||| ||||| ||||  ||||||| | ||||||||||||||||| ||||    |||||||||||||| ||||||||||| ||||||||||||||    
T  17880785 taggtcat-tagtgcaaacgaggagtttgctgagagctattgaataagaactacactagtggatttccttcttggcttggtagccccccagagtaggt 17880881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 23249791 - 23249752
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  23249791 agtggatttccttcttggcttggtagcccccagagtaggt 23249752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 22874271 - 22874206
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccc 96  Q
    ||||||| | ||||||| ||||||||||||||    |||||||||||||||| |||||||||||||    
T  22874271 ggagtttgctgagagcttttgaataaggactacactagtggatttccttcctagcttggtagcccc 22874206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 118; Significance: 1e-59; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 12 - 275
Target Start/End: Complemental strand, 5761 - 5493
Alignment:
Q  12 cataggtcatatagtgtaaacagggagttttcggagagctattgaataaggactaa----gtggatttccttcctggcttggtagcccccagagtaggta 107  Q
    |||||||||||||||||||||   |||||| | ||||||||||||||||||||||     ||||||||||||||| ||||||||||||  |||||||||     
T  5761 cataggtcatatagtgtaaacgatgagtttgctgagagctattgaataaggactacacttgtggatttccttccttgcttggtagccct-agagtaggtg 5663  T
Q  108 tgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgttttt--atttatgtttatcacgtgataatgaaa 205  Q
    |||||| |||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||  |||||||  |||| | |||||| ||||||  |||||    
T  5662 tgtttgacaccgaactgggtcaacaaattcattgtgttctttactttcctgtcttttattttgctgtttttttatttctatttatcgcgtgatgttgaaa 5563  T
Q  206 cattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    ||||||| |||||||||||||| ||| || |||||||| || ||||||||||||||| |||| |||||||    
T  5562 cattaattgtaacattgcaaacgccgtaatatcatacagaacatattaaaacaagtgcgctaaaatttca 5493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 112; Significance: 4e-56; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 87855 - 87648
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccaga-gt 102  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||    |||||||||||||||| |||||| |||||||| | ||    
T  87855 aggtcctaggtcatatagtgtaaacgaggagtttgctgagagctattgaataaggactacactagtggatttccttcctagcttgg-agcccccatacgt 87757  T
Q  103 aggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatg 202  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| |||||||||||||||  ||    
T  87756 aggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcccgccatttattttcttgtttttatttctgtttatcacgtgatgttg 87657  T
Q  203 aaacattaa 211  Q
     ||||||||    
T  87656 gaacattaa 87648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 105; Significance: 6e-52; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 45 - 274
Target Start/End: Original strand, 7616 - 7849
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||||||| ||||||||||||    |||| ||||||||||||||||||||||||| |||||| || ||||||||||| |||| |||||||||||||| |    
T  7616 gagagctatagaataaggactacactagtgaatttccttcctggcttggtagcccctagagtaagtgtgtttgtcaccgaactaggtcaacaaactcact 7715  T
Q  141 gcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcat 240  Q
    | ||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||||| || |||||| | | | |||||||||||    || |||| |    
T  7716 gtgttctttactttcttgtaatttattttcttgtttttatttctgtttatctcgtgatattggaacattgaacatgacattgcaaacgttaaatcatctt 7815  T
Q  241 acataatatattaaaacaagtgtgctagaatttc 274  Q
    ||| || ||||||||||||||| |||||||||||    
T  7816 acagaacatattaaaacaagtgcgctagaatttc 7849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 35 - 276
Target Start/End: Original strand, 18192 - 18436
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccc-cagagtaggtatgtttgtcaccaaactgggtca 129  Q
    ||||||| | ||||||||| ||||||||||||    |||||||||||||| |||||| |||||||| |||||||||| ||||||||||| |||| |||||    
T  18192 ggagtttgctgagagctatagaataaggactacactagtggatttccttcttggcttcgtagccccccagagtaggtgtgtttgtcaccgaactaggtca 18291  T
Q  130 acaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactc 229  Q
    ||||||||| |  ||||||||||||| |||||||||||||||||||||||||| |||||||  ||||||  || ||| || | ||  |||||||||||      
T  18292 acaaactcactatgttctttactttcttgtcatttattttcttgtttttatttttgtttat--cgtgatgttggaacgttgaacgggacattgcaaacgt 18389  T
Q  230 cgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
      ||||||| |||| || ||||||||||||||| |||||||||||||    
T  18390 taaaacatcttacagaacatattaaaacaagtgcgctagaatttcag 18436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 35 - 276
Target Start/End: Original strand, 27586 - 27830
Alignment:
Q  35 ggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccc-cagagtaggtatgtttgtcaccaaactgggtca 129  Q
    ||||||| | ||||||||| ||||||||||||    |||||||||||||| |||||| |||||||| |||||||||| ||||||||||| |||| |||||    
T  27586 ggagtttgctgagagctatagaataaggactacactagtggatttccttcttggcttcgtagccccccagagtaggtgtgtttgtcaccgaactaggtca 27685  T
Q  130 acaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactc 229  Q
    ||||||||| |  ||||||||||||| |||||||||||||||||||||||||| |||||||  ||||||  || ||| || | ||  |||||||||||      
T  27686 acaaactcactatgttctttactttcttgtcatttattttcttgtttttatttttgtttat--cgtgatgttggaacgttgaacgggacattgcaaacgt 27783  T
Q  230 cgaaacatcatacataatatattaaaacaagtgtgctagaatttcag 276  Q
      ||||||| |||| || ||||||||||||||| |||||||||||||    
T  27784 taaaacatcttacagaacatattaaaacaagtgcgctagaatttcag 27830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 104; Significance: 3e-51; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 45 - 273
Target Start/End: Original strand, 17354 - 17586
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||||||| ||||||||||||    ||||||||| ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| |    
T  17354 gagagctatagaataaggactacactagtggattttcttcctgacttggtagcccccagagtaggtgtgtttgtcacgaaactgggtcaacaaactcact 17453  T
Q  141 gcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatgaaacattaatcgtaacattgcaaactccgaaacatcat 240  Q
    | ||| ||||||||| ||||||||||||| ||| |||||||| |||||||| ||||||  ||||||||| | |  ||||||||||||    ||||||| |    
T  17454 gtgttttttactttcttgtcatttattttattgattttatttttgtttatcgcgtgattttgaaacattgaactgaacattgcaaacgttaaaacatcgt 17553  T
Q  241 acataatatattaaaacaagtgtgctagaattt 273  Q
    ||| || ||| ||||||||||| ||||||||||    
T  17554 acagaacatactaaaacaagtgcgctagaattt 17586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 16664 - 16871
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| ||||||||   ||||||| |  | |||| ||||||||||||||    ||||||||||||| ||||||||||||||||| |||||    
T  16664 aggtcctaggtcataaagtgtaaatgaggagtttgcttatagcttttgaataaggactacagtagtggatttcctttctggcttggtagcccccggagta 16763  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttatttatgtttatcacgtgataatga 203  Q
    ||| ||||||||||| ||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| || ||||  ||||||| |||    
T  16764 ggtgtgtttgtcaccgaactgagtcaacaaactcactgtgttctttactttcttgtcatttattttcttgtttttatttctgcttatttcgtgatattga 16863  T
Q  204 aacattaa 211  Q
    ||||||||    
T  16864 aacattaa 16871  T

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Target: scaffold0008 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 40454 - 40287
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| |||||||||  ||||||| | ||||||| ||||||||||||||    |||||||||||||||| ||||||||||||||||||||    
T  40454 aggtcctaggtcataaagtgtaaacgaggagtttgctgagagcttttgaataaggactacactagtggatttccttcctagcttggtagcccccagagta 40355  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttctt 172  Q
    ||| || |||||||  ||||||||||||||||||| || ||||||||||||| | |||||| |||||||    
T  40354 ggtgtg-ttgtcactgaactgggtcaacaaactcactgtgttctttactttcttatcattttttttctt 40287  T

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Target: scaffold0003 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 26487 - 26339
Alignment:
Q  45 gagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaactcatt 140  Q
    ||||||||  ||||||||||||    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||| || |||||||||||||||| |    
T  26487 gagagctacagaataaggactacactagtggatttccttccttgcttggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcact 26388  T
Q  141 gcgttctttactttcctgtcatttattttcttgtttttatttatgttta 189  Q
    | ||||||||||||| ||||||||| |||| ||||||||||| ||||||    
T  26387 gtgttctttactttcttgtcatttactttcatgtttttatttctgttta 26339  T

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Target: scaffold0338 (Bit Score: 78; Significance: 8e-36; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 16253 - 16524
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| ||||||||| ||||||||   |||||||   ||||||| ||||||||||||||    |||||||||||||||||||||||||||||||| |||     
T  16253 aggtcctaggtcataaagtgtaaatgaggagtttgttgagagcttttgaataaggactacactagtggatttccttcctggcttggtagcccccaaagtg 16352  T
Q  104 ggtatgtttgtcaccaaactgggtcaacaaactcattgcgttctttactttcctgtcatttattttcttgtttttat--ttatgtttatcacgtgataat 201  Q
    | |    ||| |||| |||||||| |||||||||| || ||||||||||||| |||||||||||||||||||||| |  || |||||||| ||||||  |    
T  16353 gttgacgttg-caccgaactgggttaacaaactcactgtgttctttactttcttgtcatttattttcttgttttttttcttctgtttatcgcgtgatgtt 16451  T
Q  202 gaaacattaatcgtaacattgcaaactccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 275  Q
    | || ||||| |||||||| ||||||    |||||||||||||||  ||||||||||||||  || ||||||||    
T  16452 ggaa-attaaacgtaacatcgcaaacgttaaaacatcatacataacgtattaaaacaagtgcccttgaatttca 16524  T

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Target: scaffold0088 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 36712 - 36598
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||||||||||||||  |||||||   ||||||||||||||||||||||    |||||||||||||||| ||||||||||| ||||||||    
T  36712 aggtcctaggtcatatagtgtaaacgaggagtttgttgagagctattgaataaggactacactagtggatttccttcctagcttggtagcctccagagta 36613  T
Q  104 ggtatgtttgtcacc 118  Q
    ||| |||||||||||    
T  36612 ggtgtgtttgtcacc 36598  T

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Target: scaffold0032 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 103204 - 103123
Alignment:
Q  29 aaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||| ||||||| |  |||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||||    
T  103204 aaacaaggagtttgctcagagctattgaataaggactacactagtggatttccttcctggcttggtagcccctagagtaggt 103123  T

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Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 52980 - 53066
Alignment:
Q  23 tagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagtaggt 106  Q
    ||||||||||  ||||||| | ||||||||| ||||||||||||    |||||||||||| |||||||||||||||||||||||||||    
T  52980 tagtgtaaacgaggagtttgctgagagctatagaataaggactacactagtggatttcct-cctggcttggtagcccccagagtaggt 53066  T

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Target: scaffold0143 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 36416 - 36315
Alignment:
Q  8 aggtcataggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggtagcccccagagta 103  Q
    ||||| |||||||| ||||| ||||  | ||||| | ||||||| ||||||||||||||    ||||||||| |||||||||||||||||||||||||||    
T  36416 aggtcctaggtcat-tagtgcaaacgagaagtttgctgagagcttttgaataaggactacactagtggattttcttcctggcttggtagcccccagagta 36318  T
Q  104 ggt 106  Q
    |||    
T  36317 ggt 36315  T

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Target: scaffold0022 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 3179 - 3111
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaact 136  Q
    |||||||||||||||||||||||||||| ||||||||||| || |||||||| |||||| | ||||||||    
T  3179 agtggatttccttcctggcttggtagcctccagagtaggtgtg-ttgtcaccgaactggattaacaaact 3111  T

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Target: scaffold0423 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 13659 - 13596
Alignment:
Q  72 atttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaaac 135  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||| |||||| | |||||||    
T  13659 attttcttcctggcttggtagcccctagagtaggtgtgtttgtcaccgaactggattaacaaac 13596  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 202452 - 202386
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||||||||||| |||||||||||||||||||  | ||||||||| | |||||||| |||||    
T  202452 agtggatttccttcctgacttggtagcccccagagtacttgtgtttgtcaacgaactgggttaacaa 202386  T

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Target: scaffold0328 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 17018 - 17098
Alignment:
Q  14 taggtcatatagtgtaaacagggagttttcggagagctattgaataaggacta----agtggatttccttcctggcttggt 90  Q
    |||||||||||||| ||||  |||||||   ||||||||||||||||||||||    |||||||||||||||||| |||||    
T  17018 taggtcatatagtgcaaacgaggagtttgttgagagctattgaataaggactacactagtggatttccttcctggattggt 17098  T

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Target: scaffold0505 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 10138 - 10204
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||||||| ||| |||||||||||| |||||| || | ||||||||| |||||||| |||||    
T  10138 agtggatttcctttctgacttggtagccccaagagtaagtgtatttgtcaccgaactgggttaacaa 10204  T

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Target: scaffold0520 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 5475 - 5409
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||||||| ||| |||   |||||| ||||||||| ||||||||||| |||||||| |||||    
T  5475 agtggatttcctttctgacttaacagcccctagagtaggtgtgtttgtcaccgaactgggttaacaa 5409  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 37422 - 37357
Alignment:
Q  67 agtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccaaactgggtcaacaa 133  Q
    ||||||||||||||||| |||||||| ||||| ||| ||| ||| ||||||| |||||||| |||||    
T  37422 agtggatttccttcctgacttggtag-ccccatagtgggtgtgtctgtcaccgaactgggttaacaa 37357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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