View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5944-Insertion-3 (Length: 595)
Name: NF5944-Insertion-3
Description: NF5944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5944-Insertion-3 |
 | |
|
| [»] chr6 (32 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 352; Significance: 0; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 17 - 595
Target Start/End: Original strand, 4298172 - 4298758
Alignment:
| Q |
17 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
116 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||| ||| ||| || |||||||||||| | |||| ||||||||| || ||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
117 |
aacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaacttcttgct |
216 |
Q |
| |
|
|| ||| ||||||||||| |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttcttgct |
4298371 |
T |
|
| Q |
217 |
aaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctgaagaacatg |
316 |
Q |
| |
|
||||||| ||| || |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4298372 |
aaacttcgtgattctgccactgctggtcttgtaccaccagttacttgcttagttgctgattttttaatgtcatttaccatacaagctgcggaagaacatg |
4298471 |
T |
|
| Q |
317 |
cactcgcaattgttctcttttgtccagttagtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaattccactcagagg |
416 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
4298472 |
cactcccaattattctcttttgtccagctagtgcatgttccttcttggtagctttgcactttcgtacgctgattgagaaaggtctaattccacttaaagg |
4298571 |
T |
|
| Q |
417 |
taacaatttctgctatgtaatatatacac--------atgtgtgtgtgaaggaacaaagttacttcacgagtaattctgcttaataactcatcataaacc |
508 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4298572 |
taacaatttctgctatataatatatacacgtgtgtgtgtgtgtgtgtgaagggatgaagttacttcacgagtaattctgcttaataactcatcataaacc |
4298671 |
T |
|
| Q |
509 |
ttgattctcaccaatccaaagtttcttaaaatccagaatttgtagctatgtgatctgacagtaaacatttacttatatgttttaaag |
595 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4298672 |
ttgattctcaccaatccaaagtttcttaaaatccagaatttgcagctatatgatctgacagtaaacatttacttatattttttaaag |
4298758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 9 - 425
Target Start/End: Complemental strand, 4627612 - 4627196
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627612 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
4627513 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4627512 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttggtgaac |
4627413 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
4627412 |
ttcttgctaaacttcatgactcagccactgctggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtcatttaccatacaagctgctga |
4627313 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaattcca |
408 |
Q |
| |
|
||||||||||||| |||||| |||||||| | | |||||||||||| |||||| |||| |||| ||||| ||| |||| ||||||||||| ||| |
|
|
| T |
4627312 |
agaacatgcactcccaattgctctcttttctacttctagtgcatgttctttcttgtctattttgcactttcgtacactgtttgaaaaaggtctaatacca |
4627213 |
T |
|
| Q |
409 |
ctcagaggtaacaattt |
425 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
4627212 |
ctcaaaggtaacaattt |
4627196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 428
Target Start/End: Original strand, 4258842 - 4259261
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || | | |
|
|
| T |
4258842 |
aacctttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaa |
4258941 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| | || ||| | ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
4258942 |
gatggtctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaac |
4259041 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|||||||||||||||| ||||| |||||| | ||| |||||||||| |||||||||||||||||||||| || |||||||||| |||||||||||||| |
|
|
| T |
4259042 |
ttcttgctaaacttcaagactcagccactactggtattgttccacctgttacttgcttagtttctgattgttacatgtcatttagtatacaagctgctga |
4259141 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaattcca |
408 |
Q |
| |
|
||| ||||||||| |||||||| |||| | ||||| ||||||| || |||||||| | ||| |||| ||||| ||| |||| ||||||||||| ||| |
|
|
| T |
4259142 |
agagcatgcactcccaattgttttcttctctccagctagtgcaagtaccttcttgtctgttttacactttcgtacactgtttgaaaaaggtctaatacca |
4259241 |
T |
|
| Q |
409 |
ctcagaggtaacaatttctg |
428 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
4259242 |
ctcaaaggtaacaatttctg |
4259261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 20 - 424
Target Start/End: Complemental strand, 4623758 - 4623354
Alignment:
| Q |
20 |
acactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaac |
119 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| || |||| |||||||||||| |||||||||||||| |
|
|
| T |
4623758 |
acaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatggtttaac |
4623659 |
T |
|
| Q |
120 |
accactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaacttcttgctaaa |
219 |
Q |
| |
|
|||| | ||||||||||| ||||||| ||||||||||||||| |||||| | |||||||| ||||| ||| ||| |||||| || |||||||||| ||| |
|
|
| T |
4623658 |
accaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttctatcatcccttttgtgaacttcttgcaaaa |
4623559 |
T |
|
| Q |
220 |
cttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctgaagaacatgcac |
319 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
4623558 |
cttcatgactctgccactgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaagagcatgcac |
4623459 |
T |
|
| Q |
320 |
tcgcaattgttctcttttgtccagttagtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaattccactcagaggtaa |
419 |
Q |
| |
|
|| |||||||| |||| | |||| ||||||| || |||||||| | ||| |||| | ||| ||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
4623458 |
tcccaattgttttcttctccccagctagtgcaagtaccttcttgtctgttttacactttcatacactgtttgagaaaggtctaataccactcaaaggtaa |
4623359 |
T |
|
| Q |
420 |
caatt |
424 |
Q |
| |
|
||||| |
|
|
| T |
4623358 |
caatt |
4623354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 355
Target Start/End: Complemental strand, 4575917 - 4575571
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||| |
|
|
| T |
4575917 |
aacctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactatacca |
4575818 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| ||| || ||| |||| ||||| | ||||||| ||| ||| ||| | ||||||| | || |||||| | || ||||| | ||| |
|
|
| T |
4575817 |
gatggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctcttggtgaatcaatcataacgaactttcgccacttctttgatgaac |
4575718 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| |||||| | || ||||| ||||||||||||||||||| | ||| ||||||| || | |||||||| |
|
|
| T |
4575717 |
ttcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgctga |
4575618 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgtt |
355 |
Q |
| |
|
||||||||| ||| |||||||||| |||| ||| ||||||||||| |
|
|
| T |
4575617 |
agaacatgccctcccaattgttcttttttccccatgtagtgcatgtt |
4575571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 9 - 333
Target Start/End: Original strand, 4502959 - 4503283
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4502959 |
aacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttacctttgagaccatacca |
4503058 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| || | ||||||||||| ||||||| ||||||| ||| | | || | || |||||| | ||||| || | || ||||||| || |
|
|
| T |
4503059 |
gatggtttaactccggtggaaggtgatggtgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaattttcaccaattctttggtgaat |
4503158 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|||||| ||||||| ||||||| |||||||| |||||| | || ||||||||||||||||||||||||| ||| ||||| | || | |||||||| |
|
|
| T |
4503159 |
ttcttgttaaacttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgattgcaacatgccatttccagtatatgctgctga |
4503258 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctc |
333 |
Q |
| |
|
||||||| ||||| ||||||||||| |
|
|
| T |
4503259 |
agaacatacactcccaattgttctc |
4503283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 9 - 312
Target Start/End: Complemental strand, 4594472 - 4594178
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| || ||||| |||||| ||||||||| |
|
|
| T |
4594472 |
aacctttgtcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccatacca |
4594373 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| |||||||| | ||||||||||| ||||||| ||||||||||||||| ||| ||||||| ||||||||||| |||||| | |||||| || ||| |
|
|
| T |
4594372 |
gatggtctaacaccaatggaaggtgatggtgatgttagtcaagacataccctctcttgctcaatctataagaaagaatttccttaaacccttttgtgaac |
4594273 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||| | | |||| ||||||| ||| |||||||||||||||||||||||||||||||| ||| ||| ||||| ||||| ||||||| |
|
|
| T |
4594272 |
ttcttacaagacttaatgactctacca---------atgttccaccagttacttgcttagtttctgattattttatgagctttactatacaggctgctgt |
4594182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 4562124 - 4561796
Alignment:
| Q |
8 |
aaacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacc |
107 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||| |
|
|
| T |
4562124 |
aaacctttgttaacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactatacc |
4562026 |
T |
|
| Q |
108 |
agatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaa |
207 |
Q |
| |
|
|||||||||||| ||| || |||||||| ||| ||| ||||||| ||| ||| ||| | ||||||| | || |||||| | || ||||| | || |
|
|
| T |
4562025 |
agatggtttaactccaaaggatggtgatggtgatattagtcaagacctacactctcttggtgaatcaatcataacgaactttcaccacttctttgatgaa |
4561926 |
T |
|
| Q |
208 |
cttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctg |
307 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| |||||| | || ||||| ||||||||||||||||||| | ||| ||||||| || ||||||| |
|
|
| T |
4561925 |
cttcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagctgctgctg |
4561826 |
T |
|
| Q |
308 |
aagaacatgcactcgcaattgttctctttt |
337 |
Q |
| |
|
|||||||||||||| || ||||||| |||| |
|
|
| T |
4561825 |
aagaacatgcactcccagttgttctttttt |
4561796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 4488863 - 4489191
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||| || ||| |
|
|
| T |
4488863 |
aacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattcca |
4488962 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| ||| ||| |||||||||||||||| |||||| ||| | | |||| || |||||| | || || || | || ||||||| | |
|
|
| T |
4488963 |
gatggtttaactccaacagatggtgatggcgatgttagtcaagatttacgcgctctttgtctatcaatcatgaacaattttcaccaattctttggtgtat |
4489062 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|||||||||||||| ||||||| || ||||| |||||| | || ||||||||||||||||||||||||| ||| ||||||| || | |||||||| |
|
|
| T |
4489063 |
ttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctga |
4489162 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctctttt |
337 |
Q |
| |
|
||||||||||||| ||||||||||||||| |
|
|
| T |
4489163 |
agaacatgcactcccaattgttctctttt |
4489191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 9 - 354
Target Start/End: Complemental strand, 4581476 - 4581131
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| ||||||||||||||||| || ||| |
|
|
| T |
4581476 |
aacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattcca |
4581377 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| || ||||||| ||| | ||||||| |||||||||| | || | | ||||||| |||||||||||||| || || ||| || ||| |
|
|
| T |
4581376 |
gatggtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaac |
4581277 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||||||| |||| ||||||| |||||| | |||||||| || |||||||||||| ||||||||||| | |||| ||||| |||||||||||||| |
|
|
| T |
4581276 |
ttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgataatagcatgtattttacaatacaagctgctga |
4581177 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgt |
354 |
Q |
| |
|
||||| | || || | ||||| ||||| |||||| ||||||||| |
|
|
| T |
4581176 |
agaactttcaatccctgttgttttctttagtccagccagtgcatgt |
4581131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 4517802 - 4517495
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || ||| |
|
|
| T |
4517802 |
aacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattcca |
4517703 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| || ||||||| ||||| ||||||| ||||||||| ||| ||||| | |||||||||||||| ||| ||| ||||| || ||| |
|
|
| T |
4517702 |
gatggtttaactccgatagaaggcgatggtgatgttagtcaagacattatctctctttccgattcaataagaaagaatttctatcaccccttctgtgaac |
4517603 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||||||| |||| | || || ||| || |||| | |||| || |||| |||||||||||||||| || | || | ||||| |||||||||||||| |
|
|
| T |
4517602 |
ttcttgctagacttaaagattcttccaatgatggtcatattcctcctgttagttgcttagtttctgatattggattgacttttactatacaagctgctga |
4517503 |
T |
|
| Q |
309 |
agaacatg |
316 |
Q |
| |
|
|||||||| |
|
|
| T |
4517502 |
agaacatg |
4517495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 9 - 355
Target Start/End: Complemental strand, 4482327 - 4481981
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| || |||||| |
|
|
| T |
4482327 |
aacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgatacca |
4482228 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| ||| | |||||||||| || || | ||||||| || ||| ||| |||||||||| | | |||||| | || ||||| | || |
|
|
| T |
4482227 |
gatggtttaactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaatcatgacgaactttcgccacttctttgatgaat |
4482128 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|||| |||||||||||||| || |||||||| ||| || | || ||||| ||||||||||||||||||| | ||| ||||||| || | ||||| || |
|
|
| T |
4482127 |
ttctggctaaacttcatgaatctgccactgctggtattatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgccga |
4482028 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgtt |
355 |
Q |
| |
|
||||||||||||| ||||||||||||||| || || |||||||||| |
|
|
| T |
4482027 |
agaacatgcactcccaattgttctcttttccccggtcagtgcatgtt |
4481981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 9 - 364
Target Start/End: Complemental strand, 3173465 - 3173110
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| |||||| |
|
|
| T |
3173465 |
aacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagactatacca |
3173366 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| || | ||||||||||| ||||||| ||||||| ||| | | |||| || |||||| | |||||||| | || ||| || ||| |
|
|
| T |
3173365 |
gatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaac |
3173266 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|| ||||||||||||| || || || ||||| |||||| | || |||||||||||||| ||||| |||| | ||| ||||||| || | | |||||| |
|
|
| T |
3173265 |
tttttgctaaacttcacgattctgcaactgctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctga |
3173166 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgttccttcttgg |
364 |
Q |
| |
|
||||||||| ||| |||||||||| |||| || ||||||||||| |||||||| |
|
|
| T |
3173165 |
agaacatgctctcccaattgttctattttcgccgtgtagtgcatgtttcttcttgg |
3173110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 9 - 335
Target Start/End: Complemental strand, 4565491 - 4565174
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||||| | || |||| |||||| ||||||||| |
|
|
| T |
4565491 |
aacctttgtcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccatacca |
4565392 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| ||||||| ||||||||||||| ||||||| |||||| |||| || ||| ||||||| |||||||| || |||||| | || ||| || ||| |
|
|
| T |
4565391 |
gatggtctaacaccgatagaaggtgatggtgatgttagtcaagatgtaccttctcttgctcaatctataagaaaaaatttccttaaacctttttgtgaac |
4565292 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||| | | |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||||||||| |
|
|
| T |
4565291 |
ttcttacaagacttaatgactctgcca---------atgttccaccagttacttgcttagtttctgattattttatgagctttactatacaagctgctga |
4565201 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctctt |
335 |
Q |
| |
|
|||| |||||| |||||||| |||| |
|
|
| T |
4565200 |
agaatttgcactaccaattgttatctt |
4565174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 313
Target Start/End: Complemental strand, 4558587 - 4558283
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||| ||| |||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||| || || |
|
|
| T |
4558587 |
aacctatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccg |
4558488 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| ||| || |||||||||||||||| ||||||||| | | |||| | ||||||| |||||||||||||| || || || | ||| |
|
|
| T |
4558487 |
gatggtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaac |
4558388 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||||||| ||| ||||||| || || | |||||||| || |||||||||||| ||||||||||| || ||||| ||||||||||||||| |||| |
|
|
| T |
4558387 |
ttcttgctagactaaatgactctgcaacatctggtcttgtccctccagttacttgcatagtttctgatattggcatgtcttttaccatacaagcttctga |
4558288 |
T |
|
| Q |
309 |
agaac |
313 |
Q |
| |
|
||||| |
|
|
| T |
4558287 |
agaac |
4558283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 9 - 427
Target Start/End: Complemental strand, 4507373 - 4506955
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |
|
|
| T |
4507373 |
aacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttgagactctacca |
4507274 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| ||| | || |||||||| ||||||| || |||| | || || | |||| || |||||||| || || | || ||| | ||| |
|
|
| T |
4507273 |
gatggtttaactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaagaaatttatttacccttttcgcgaac |
4507174 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|||| |||| |||| ||||||| || | | |||||||| || || |||||||||||||||||||||| | | |||||||||||||| || |||||| |
|
|
| T |
4507173 |
ttctagctagacttgatgactctgcgaaatctggtcttgtgcctcctgttacttgcttagtttctgattgtctcttgtcatttaccataagagttgctga |
4507074 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaattcca |
408 |
Q |
| |
|
|||| |||||| ||||||||||| || ||| ||||||| ||||| ||| || | ||| |||| ||||| |||||||||||||||| | ||| |
|
|
| T |
4507073 |
agaatttgcacttccaattgttctccttgtcccatttagtgcttgttctttcatgtctgttttacactttcgtacattgattgagaaaggtctcgtacca |
4506974 |
T |
|
| Q |
409 |
ctcagaggtaacaatttct |
427 |
Q |
| |
|
|||| ||||||||| |||| |
|
|
| T |
4506973 |
ctcaaaggtaacaagttct |
4506955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 9 - 326
Target Start/End: Original strand, 4265723 - 4266040
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
4265723 |
aacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccatacca |
4265822 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| |||| ||| | ||||| |||| |||| ||||||||||||| | | ||| |||||||| | | |||||||||||| ||||||| | ||| |
|
|
| T |
4265823 |
gatggtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcaaccctttgatgaac |
4265922 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||| ||| ||||||| | || |||| || ||| || |||||||| |||||||||| ||||| |||| || ||| | ||||| ||| | ||||| || |
|
|
| T |
4265923 |
ttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgctgcgga |
4266022 |
T |
|
| Q |
309 |
agaacatgcactcgcaat |
326 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
4266023 |
agaacatgcactcccaat |
4266040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 9 - 354
Target Start/End: Complemental strand, 4587094 - 4586749
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| || ||||||| | |||||||||||||| ||| |||||||| ||||||||| || ||| |
|
|
| T |
4587094 |
aacctttgtaaacactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattcca |
4586995 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| ||| || |||||||| ||||||| ||||||||| | | |||| | ||||||| |||||||||||||| || || || | ||| |
|
|
| T |
4586994 |
gatggtttaactccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaac |
4586895 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||||||| |||| ||||||| || || | |||||| | || ||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||| |
|
|
| T |
4586894 |
ttcttgctagacttaatgactctgcaacatctggtcttatccctccagtcacttgtatagtttctgatattaccatgtcctttactatacaagctgctga |
4586795 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgt |
354 |
Q |
| |
|
||||| | ||||| || ||||| ||||| ||||| ||||||||| |
|
|
| T |
4586794 |
agaactttcactcccacttgttttctttaatccagccagtgcatgt |
4586749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 9 - 334
Target Start/End: Complemental strand, 4618763 - 4618447
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| || |||| |||||||| ||| ||| |
|
|
| T |
4618763 |
aacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattcca |
4618664 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||||| |||||| |||| | |||| ||||||| ||||||||||||||||| | |||| | || ||| |
|
|
| T |
4618663 |
gatggtttaacaccaatggaaggtgatggtgatgttagtcaagatgtaccaactctttgtcaatcagtaagaaagaacttccttaaaccctattgtgaac |
4618564 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||| | | |||| | |||| ||| |||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
4618563 |
ttcttacaagacttaaccactctacca---------atgttccaccagttacttgcttagtttctgattgttgtatgagctttactatacaagctgctga |
4618473 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctct |
334 |
Q |
| |
|
|||| || |||| ||| |||||||| |
|
|
| T |
4618472 |
agaatttgaactcccaaatgttctct |
4618447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 9 - 334
Target Start/End: Complemental strand, 4603572 - 4603256
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || || ||| |||||||| |||||| || || ||| |
|
|
| T |
4603572 |
aacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttgaaacaatccca |
4603473 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||| ||||||| | |||||||||| |||||| |||||| |||| || |||||||||| ||||||||||| |||||| | |||||| || ||| |
|
|
| T |
4603472 |
gatggactaacaccgatggaaggtgatgataatgttagtcaagatgtaccttctatttctcaatctataagaaagaatttccttaaacccttttgtgaac |
4603373 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||| | | |||| || |||| ||| |||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
4603372 |
ttcttacaagacttaatcactctacca---------atgttccaccagttacttgcttagtttctgattcttgtatgagctttactatacaagctgctga |
4603282 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctct |
334 |
Q |
| |
|
|||| |||||| ||| |||||||| |
|
|
| T |
4603281 |
agaatttgcacttccaaatgttctct |
4603256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 9 - 313
Target Start/End: Complemental strand, 4572428 - 4572124
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||| |||||||| || ||| |
|
|
| T |
4572428 |
aacctatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattcca |
4572329 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||| | ||| || || ||||||||||||| ||||||||| | | |||| | ||||||| || ||||| || || || || || | ||| |
|
|
| T |
4572328 |
gatggtttatctccaacggatggcgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcaggaagaattttctacaacctttccgcgaac |
4572229 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||||||| |||| ||||||| || || | |||||||| | ||||||| |||| ||||||||||| || ||||| ||||| |||||||||||||| |
|
|
| T |
4572228 |
ttcttgctagacttaatgactctgcaacatctggtcttgtccgtccagttagttgcatagtttctgatattagcatgtcctttactatacaagctgctga |
4572129 |
T |
|
| Q |
309 |
agaac |
313 |
Q |
| |
|
||||| |
|
|
| T |
4572128 |
agaac |
4572124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 13 - 355
Target Start/End: Complemental strand, 4471372 - 4471033
Alignment:
| Q |
13 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
112 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||| || | ||||||||||| ||| |||| |||||||||||| ||| ||| |
|
|
| T |
4471372 |
tttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttgagaccattccaaatg |
4471273 |
T |
|
| Q |
113 |
gtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaacttct |
212 |
Q |
| |
|
|||| || || | ||| ||| || || ||| ||||||||||| ||| ||| || |||||| | | | |||||||||| ||||||||| ||||||| |
|
|
| T |
4471272 |
gttttactgcaatggaaagtggtg---atcttattcaagacatacactccttttttcgatcaatcatgacggacttccttcaaccctttggtgaacttct |
4471176 |
T |
|
| Q |
213 |
tgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctgaagaa |
312 |
Q |
| |
|
| ||| |||| ||| ||| |||||||| |||||| | || |||||||||||| || ||||||||| || ||| ||||||| || | |||||||||||| |
|
|
| T |
4471175 |
tactagacttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgattgttacatgccatttacagtagatgctgctgaagaa |
4471076 |
T |
|
| Q |
313 |
catgcactcgcaattgttctcttttgtccagttagtgcatgtt |
355 |
Q |
| |
|
| ||||||| |||| |||||||||| ||| || || ||||||| |
|
|
| T |
4471075 |
cgtgcactcccaatcgttctcttttctccggtcagcgcatgtt |
4471033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 4612391 - 4612694
Alignment:
| Q |
16 |
gtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtt |
115 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
4612391 |
gtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggtc |
4612490 |
T |
|
| Q |
116 |
taacaccactagaa------ggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaact |
209 |
Q |
| |
|
|| | || ||| |||||||| ||||||| |||||||||| | |||| | ||||||| |||||||||||||| || || ||| | |||| |
|
|
| T |
4612491 |
taccttcaaacgaaggcgatggtgatggtgatgttagtcaagacatatatgctctttgtgaatcaatcagaaagaacttcctacaaccttttcgcgaact |
4612590 |
T |
|
| Q |
210 |
tcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctgaa |
309 |
Q |
| |
|
| || ||| |||| ||||||| |||||| | |||||||| || || ||||| ||| || || ||||| | ||||| |||||||||||||||| |||| |
|
|
| T |
4612591 |
tatttctagacttaatgactctgccacttctggtcttgtccctccggttacgtgcataattgctgataatagcatgtcttttaccatacaagctggtgaa |
4612690 |
T |
|
| Q |
310 |
gaac |
313 |
Q |
| |
|
|||| |
|
|
| T |
4612691 |
gaac |
4612694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 247 - 425
Target Start/End: Original strand, 4255543 - 4255721
Alignment:
| Q |
247 |
gttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctgaagaacatgcactcgcaattgttctcttttgtccagtta |
346 |
Q |
| |
|
||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||| || |
|
|
| T |
4255543 |
gttccactagttacttgcttagtttctgattgttacatgtcatttaccatacaagctgctgaagagcatgcactcccaattgttctcctttccccagata |
4255642 |
T |
|
| Q |
347 |
gtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaattccactcagaggtaacaattt |
425 |
Q |
| |
|
||||||| ||||| ||||| |||||||||| ||| || ||||||||||||| ||| ||| ||||| ||||| |
|
|
| T |
4255643 |
ttgcatgtatgttcttctctgctttacacttccgtacactgtttaagaaaggtctaataccattcaatggtaaaaattt |
4255721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 4569532 - 4569323
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || ||| |
|
|
| T |
4569532 |
aacctttgtcaacaccgaa----atcacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattcca |
4569437 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| || ||||||| |||| ||| ||| |||||| || ||| ||| | | |||||||||||||| ||| ||| || ||| || ||| |
|
|
| T |
4569436 |
gatggtttaactccgacagaaggttatggtgatattagtcaagaaattgtctctcttgatgattcaataagaaagaatttctatcaccctttttgtgaac |
4569337 |
T |
|
| Q |
209 |
ttcttgctaaactt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4569336 |
ttcttgctaaactt |
4569323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 342
Target Start/End: Complemental strand, 4599625 - 4599293
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
|||||| || ||||| || |||||||||||||| |||||||||||||||||| ||| | | |||||||| ||||||| |||| ||||| || ||| |
|
|
| T |
4599625 |
aaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactgatttttccttcgagactattcca |
4599526 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||||||| ||| |||| |||||||| |||||||| || |||||| || || | | ||||||| ||||| |||||||| || || ||| | ||| |
|
|
| T |
4599525 |
gatggtttaactccaatagatggtgatggtgatgttacacaggacataaattctctctgtaaatcaatcagaaataacttcctccaaccatttcgcgaac |
4599426 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||||||| ||| |||| || | ||||| |||||| | || |||||||||||||||| || ||||| ||||| ||||| ||||||| |||||| |
|
|
| T |
4599425 |
ttcttgctagactctatgagtcttctactgctggtcttatccctccagttacttgcttag-ttatgattggaacatgtcctttactatacaagttgctga |
4599327 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtcca |
342 |
Q |
| |
|
||||| | |||| | |||||||||||| ||||| |
|
|
| T |
4599326 |
agaactttcacttcctattgttctctttagtcca |
4599293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 4513645 - 4513755
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||| || || |
|
|
| T |
4513645 |
aacctttgttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcct |
4513744 |
T |
|
| Q |
109 |
gatggtttaac |
119 |
Q |
| |
|
||||||||||| |
|
|
| T |
4513745 |
gatggtttaac |
4513755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 9 - 355
Target Start/End: Complemental strand, 4462669 - 4462326
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||| ||||||||| ||| | | ||||||||| ||| |||| |||||||||||| ||| |
|
|
| T |
4462669 |
aacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattcca |
4462570 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
||||||| ||| || | ||| || || ||||| ||||||| ||| || ||| ||||||||| | | ||||||| |||| |||||| || ||| |
|
|
| T |
4462569 |
aatggttttacaacaatggaaactggtg---atgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttagtgaac |
4462473 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||| | | |||| ||| ||| |||||||||| |||| | || || ||||||||| |||||||||||| || ||| ||||||| | | || ||||| |
|
|
| T |
4462472 |
ttcttacaagacttgatgcctctgccactgccgatcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctga |
4462373 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgtt |
355 |
Q |
| |
|
| ||| ||||||| |||| |||||||||| || || |||||||||| |
|
|
| T |
4462372 |
acaacgtgcactcccaatcgttctcttttccccggtcagtgcatgtt |
4462326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 4255478 - 4255545
Alignment:
| Q |
12 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtt |
79 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
4255478 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggtt |
4255545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 4483534 - 4483568
Alignment:
| Q |
26 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
60 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
4483568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 4513895 - 4513965
Alignment:
| Q |
256 |
gttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctgaagaacatgcactcgcaat |
326 |
Q |
| |
|
|||||||||||||||||||||| | | ||| ||||||| | ||||| ||||||||||| ||||||| |||| |
|
|
| T |
4513895 |
gttacttgcttagtttctgattgtattatgccatttactacacaagttgctgaagaacttgcactcccaat |
4513965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 4496222 - 4496189
Alignment:
| Q |
27 |
atacaatcacaaacgtttgctcaaatcaagaggt |
60 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
4496222 |
atacaatgacaaacgtttgctcaaatcaagaggt |
4496189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 126; Significance: 9e-65; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 9 - 427
Target Start/End: Original strand, 2117 - 2538
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || |
|
|
| T |
2117 |
aacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattccc |
2216 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcg---atgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtc |
205 |
Q |
| |
|
||||||||||| ||| | |||| ||||| | |||||| ||||||||||| ||| |||| | ||||||| ||||| ||||||||||| |||| | |
|
|
| T |
2217 |
gatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcg |
2316 |
T |
|
| Q |
206 |
aacttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgc |
305 |
Q |
| |
|
|||||||||||| |||| | || || |||| | | |||||| | || ||||| ||| ||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
2317 |
aacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttaccatacaagctgc |
2416 |
T |
|
| Q |
306 |
tgaagaacatgcactcgcaattgttctcttttgtccagttagtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaatt |
405 |
Q |
| |
|
||||||| |||||||| |||| |||| | || |||| ||||||||| ||||||||| | || | |||| || || |||||||| ||||||||||| |
|
|
| T |
2417 |
tgaagaatatgcactcccaatccttctttattcgccaggtagtgcatgctccttcttgtctgtttcgcactttcgcacactgattgacaaaggtctaata |
2516 |
T |
|
| Q |
406 |
ccactcagaggtaacaatttct |
427 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
2517 |
ccactcaaaggtaacaatttct |
2538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 131 - 337
Target Start/End: Original strand, 3310 - 3516
Alignment:
| Q |
131 |
gtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaacttcttgctaaacttcatgactc |
230 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||| |||||| ||||||| ||| ||| |||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
3310 |
gtgatggtgatgttactcaagacataccctctcttgttcaatctataagaacgaatttctttcagcccttcaatgaacttcttgttaaacttcatgactc |
3409 |
T |
|
| Q |
231 |
ggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctgaagaacatgcactcgcaattgtt |
330 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||| |||||| || ||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
3410 |
tgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagctgctgaagaacatgcactcccaattgtt |
3509 |
T |
|
| Q |
331 |
ctctttt |
337 |
Q |
| |
|
||||||| |
|
|
| T |
3510 |
ctctttt |
3516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 9 - 342
Target Start/End: Complemental strand, 1282895 - 1282571
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| |||||||| |||||| ||||| ||| |
|
|
| T |
1282895 |
aacctttgttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatccca |
1282796 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| ||||| |||||||||||||||| ||||||| |||| | |||| || |||| |||||| ||||||||||| |||||| | |||| | || ||| |
|
|
| T |
1282795 |
gatggtctaacatcactagaaggtgatggtgatgttagtcaacatgtaccttctctttgtcaatctataagaaagaatttccttaaaccctattgtgaac |
1282696 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
|| || ||| |||| || |||| || || |||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
1282695 |
ttattactagacttaatcactctgctac---------tgttccaccagttacttgcttagtttctgattgcttgatgagctttactatacaagctgctga |
1282605 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtcca |
342 |
Q |
| |
|
|||| ||||||| | | ||||||||||| |||| |
|
|
| T |
1282604 |
agaatttgcactccctaatgttctcttttttcca |
1282571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 9 - 354
Target Start/End: Complemental strand, 3088207 - 3087862
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
|||||||||||| || |||||||||||||| |||||||| |||||||||||| ||| | ||||||||||| ||||||| ||||||||| || | | |
|
|
| T |
3088207 |
aacctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaa |
3088108 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| |||| ||| | |||||| |||| ||||||| ||||||| | | || |||| ||||||| | ||||||||||| |||| ||||||||| ||| |
|
|
| T |
3088107 |
gatggtctaactccaatggaaggtaatggtgatgttagtcaagacttggcatctctttgtcaatcagttggaaagaacttcattcaaccctttggtgaac |
3088008 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
||||| | | |||||||||| ||| ||| |||||| |||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||| |
|
|
| T |
3088007 |
ttcttcgtcgaattcatgactctgccgatgctggtcttattccaccagttacttgcttagtagctgatttttacatgccatttaccatacaagttgctga |
3087908 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctcttttgtccagttagtgcatgt |
354 |
Q |
| |
|
||| |||||||| |||| ||||||||| |||| ||||||||| |
|
|
| T |
3087907 |
agagaatgcactcccaatccttctcttttcaccagccagtgcatgt |
3087862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 334
Target Start/End: Complemental strand, 1220 - 907
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||| |
|
|
| T |
1220 |
aacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatccca |
1121 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| |||| |||| || |||| |||||| ||||||||||| |||||| | |||||| || ||| |
|
|
| T |
1120 |
gatggtctaacaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttttgtgaac |
1024 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
| || || |||| || |||| |||| |||||||||||||||||||||| ||||||||| || ||| ||||| || ||||||||||| |
|
|
| T |
1023 |
tcattaatagacttaatcactctgcca---------atgttccaccagttacttgcttaatttctgattgttgtatgagctttactatgcaagctgctga |
933 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctct |
334 |
Q |
| |
|
|||| | ||||| ||||| |||||| |
|
|
| T |
932 |
agaattttcactcccaattcttctct |
907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 98; Significance: 5e-48; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 334
Target Start/End: Complemental strand, 1675983 - 1675670
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||| |
|
|
| T |
1675983 |
aacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatccca |
1675884 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| |||| |||| || |||| |||||| ||||||||||| |||||| | |||||| || ||| |
|
|
| T |
1675883 |
gatggtctaacaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttttgtgaac |
1675787 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgctga |
308 |
Q |
| |
|
| || || |||| || |||| |||| |||||||||||||||||||||| ||||||||| || ||| ||||| || ||||||||||| |
|
|
| T |
1675786 |
tcattaatagacttaatcactctgcca---------atgttccaccagttacttgcttaatttctgattgttgtatgagctttactatgcaagctgctga |
1675696 |
T |
|
| Q |
309 |
agaacatgcactcgcaattgttctct |
334 |
Q |
| |
|
|||| | ||||| ||||| |||||| |
|
|
| T |
1675695 |
agaattttcactcccaattcttctct |
1675670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 423
Target Start/End: Original strand, 20862667 - 20862884
Alignment:
| Q |
206 |
aacttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcatttaccatacaagctgc |
305 |
Q |
| |
|
|||||||||| |||||||||||||| ||| | |||||| | || || ||||||||||||||||||||| ||| |||||| |||||||||||| ||| |
|
|
| T |
20862667 |
aacttcttgccaaacttcatgactcttccaaatctggtcttatacctcctgttacttgcttagtttctgatagtttcatgtcagttaccatacaagttgc |
20862766 |
T |
|
| Q |
306 |
tgaagaacatgcactcgcaattgttctcttttgtccagttagtgcatgttccttcttggtagctttgtacttccgtacgctgattgagaaaggtctaatt |
405 |
Q |
| |
|
|||||||| ||||||| ||||||||||| || ||| |||||| ||||| |||||| ||||| | || ||||| |||||||||||||| | || |
|
|
| T |
20862767 |
tgaagaacttgcactcccaattgttctccttatcccatctagtgcttgttctttcttgtctgctttacatttacgtacattgattgagaaaggtgtcata |
20862866 |
T |
|
| Q |
406 |
ccactcagaggtaacaat |
423 |
Q |
| |
|
|| |||| |||||||||| |
|
|
| T |
20862867 |
cccctcaaaggtaacaat |
20862884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 85 - 336
Target Start/End: Original strand, 16685029 - 16685287
Alignment:
| Q |
85 |
gattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaaga |
184 |
Q |
| |
|
||||||| ||||||||| || ||| |||||||| | ||| || |||||||||||||||| ||||||||||| | | |||| | ||||||| ||||||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
185 |
acttccttcagccctttggtcaacttcttgctaaacttcatgactcggccactg--------ccggtcttgttccaccagttacttgcttagtttctgat |
276 |
Q |
| |
|
||||||| || |||||| | ||| |||||||| |||||||||| || ||| | | |||||||| || |||||||||||| ||||||||||| |
|
|
| T |
16685129 |
acttcctccaaccctttcgcgaacatcttgctagacttcatgac-cgtgcacggtgcatcatctggtcttgtccctccagttacttgcatagtttctgat |
16685227 |
T |
|
| Q |
277 |
tttttaatgtcatttaccatacaagctgctgaagaacatgcactcgcaattgttctcttt |
336 |
Q |
| |
|
|| ||||| ||||| ||||||||||||||||||| | ||||| | ||||||||||| |
|
|
| T |
16685228 |
attagcatgtcttttactatacaagctgctgaagaactttcactccctgttgttctcttt |
16685287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 9 - 277
Target Start/End: Complemental strand, 24104557 - 24104289
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
|||||| || ||||| ||||||||||||||||| |||||| ||||||||| | ||| | ||||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
24104557 |
aaccttcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccatacca |
24104458 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtcaac |
208 |
Q |
| |
|
|||||| |||| ||| | ||||| |||| |||||||||||||||||| | | ||| |||||||| | | |||||||||||||||||||| | ||| |
|
|
| T |
24104457 |
gatggtctaactccaatggaaggcaatggtgatgttactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcagccctttgatgaac |
24104358 |
T |
|
| Q |
209 |
ttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgatt |
277 |
Q |
| |
|
||||| ||| ||||||| | || |||| || ||| || |||||||| |||||||||||||||| |||| |
|
|
| T |
24104357 |
ttcttactagacttcatcaatctgccaatgatggtgttattccaccaattacttgcttagtttcggatt |
24104289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 26903670 - 26903638
Alignment:
| Q |
10 |
acctttgtcaacactgaatacaatcacaaacgt |
42 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
26903670 |
acctttgttaacactgaatacaatcacaaacgt |
26903638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 2286 - 2001
Alignment:
| Q |
9 |
aacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatacca |
108 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || |
|
|
| T |
2286 |
aacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattccc |
2187 |
T |
|
| Q |
109 |
gatggtttaacaccactagaaggtgatggcg---atgttactcaagacataccctcyctttctcaatcaataagaaagaacttccttcagccctttggtc |
205 |
Q |
| |
|
||||||||||| ||| | |||| ||||| | |||||| ||||||||||| ||| |||| | ||||||| ||||| ||||||||||| |||| | |
|
|
| T |
2186 |
gatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcg |
2087 |
T |
|
| Q |
206 |
aacttcttgctaaacttcatgactcggccactgccggtcttgttccaccagttacttgcttagtttctgattttttaatgtcattt |
291 |
Q |
| |
|
|||||||||||| |||| | || || |||| | | |||||| | || ||||| ||| ||||||||||||||| || ||||||||| |
|
|
| T |
2086 |
aacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcattt |
2001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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