View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5944-Insertion-5 (Length: 357)
Name: NF5944-Insertion-5
Description: NF5944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5944-Insertion-5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 8 - 357
Target Start/End: Complemental strand, 14085021 - 14084674
Alignment:
| Q |
8 |
acacctaactttggaggctccattaatggaaagataatggttacaaccatcagccacaaaaacggtgctaaacacaattaacccctcttccaaccaccaa |
107 |
Q |
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| T |
14085021 |
acacctaactttggaggctccattaatggaaagataatggttacaaccatcagccacaaaaacggtgctaaacacaattaacc--tcttccaaccaccaa |
14084924 |
T |
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| Q |
108 |
taatctaggaatatattcaatcacaaaaagtaatactgatgtaagtcactatgtactattaattaaacccttactaccttatagtataaataatgcaagt |
207 |
Q |
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| T |
14084923 |
taatctaggaatatattcaatcacaaaaagtaatactgatgtaagtcactatgtactattaattaaacccttactagcttatagtataaataatgcaagt |
14084824 |
T |
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| Q |
208 |
ttgtgacacttgtatctcaagctaagtcttcaaacaatttctcttttcacctttcacttctaaatcactctttcttttgtggccttgttgaatttctcaa |
307 |
Q |
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| T |
14084823 |
ttgtgacacttatatctcaagctaagtcttcaaacaatttctcttttcacctttcacttctaaatcactctttcttttgtggccttgttgaatttctcaa |
14084724 |
T |
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| Q |
308 |
tcatgagaaaagcttccaatttgcaaaggccacttttggccttctgggtt |
357 |
Q |
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| T |
14084723 |
tcatgagaaaagcttccaatttgcaaaggccacttttggccttctgggtt |
14084674 |
T |
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