View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5944-Insertion-7 (Length: 201)
Name: NF5944-Insertion-7
Description: NF5944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5944-Insertion-7 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 9 - 201
Target Start/End: Complemental strand, 8246408 - 8246215
Alignment:
| Q |
9 |
attgggtataaaaattacaatacctggtggggcatatatataaaaattattcnnnnnnnn-tgattgggtataaaactacaatccctttaaaaaattcta |
107 |
Q |
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| T |
8246408 |
attgggtataaaaattacaatccctggtggggcatatatataaaaattatttaaaaaaaaatgattgggtataaaactacaatccctttaaaaaattcta |
8246309 |
T |
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| Q |
108 |
aattgaaagtagcattttaaaaattgagcaactgcttaatcttatacacctaaatataaagaaaataaatagttttagtgtagcttctaattct |
201 |
Q |
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| T |
8246308 |
aattgaaagtagcattttaaaaattgagcaactgcttaatcttatacacctaaatataaagaaaataaatagttttagtgtagcttctaattct |
8246215 |
T |
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