View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5945-Insertion-10 (Length: 161)
Name: NF5945-Insertion-10
Description: NF5945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5945-Insertion-10 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 8e-81; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 8e-81
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 36716890 - 36717041
Alignment:
| Q |
10 |
ttattaatttgaatatgaactaaattagtgttgttaatattgtgtttaggcgattgagagaaggagggagagacagggaactgaggaaattgagcaaact |
109 |
Q |
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| T |
36716890 |
ttattaatttgaatatgaactaaattagtgttgttaatattgtgtttaggcgattgagagaaggagggagagacagggaactgaggaaattgagcaaact |
36716989 |
T |
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| Q |
110 |
ggaacaccagttcatgctaaccagctgaccattttctctgatccatcttcat |
161 |
Q |
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| T |
36716990 |
ggaacaccagttcatgctaaccagctgaccattttctctgatccatcttcat |
36717041 |
T |
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Target: chr7; HSP #2
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 1482104 - 1482253
Alignment:
| Q |
12 |
attaatttgaatatgaactaaattagtgttgttaatattgtgtttaggcgattgagagaaggagggagagacagggaactgaggaaattgagcaaactgg |
111 |
Q |
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| T |
1482104 |
attagtttgaatttgaattaatttagtgttgttaatattgtgtttaggcgattgagagaaggagggagagactgggaactgaggagattgagcaaactgg |
1482203 |
T |
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| Q |
112 |
aacaccagttcatgctaaccagctgaccattttctctgatccatcttcat |
161 |
Q |
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| T |
1482204 |
aacaccagttcatgctaaccagctgaccattttctctgatccatcttcat |
1482253 |
T |
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