View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5945-Insertion-6 (Length: 324)
Name: NF5945-Insertion-6
Description: NF5945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5945-Insertion-6 |
 | |
|
| [»] chr6 (32 HSPs) |
| |
|
| [»] scaffold0477 (1 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| |
|
| [»] chr3 (1 HSPs) |
| |
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| [»] chr7 (3 HSPs) |
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| [»] chr8 (4 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] scaffold0475 (2 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 316; Significance: 1e-178; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 9 - 324
Target Start/End: Original strand, 4622288 - 4622603
Alignment:
| Q |
9 |
tgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagc |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4622288 |
tgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagc |
4622387 |
T |
|
| Q |
109 |
gaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggtta |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4622388 |
gaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggtta |
4622487 |
T |
|
| Q |
209 |
agtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggt |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4622488 |
agtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggt |
4622587 |
T |
|
| Q |
309 |
caggcctaatgatcca |
324 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4622588 |
caggcctaatgatcca |
4622603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 49 - 324
Target Start/End: Original strand, 4461309 - 4461584
Alignment:
| Q |
49 |
gatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatg |
148 |
Q |
| |
|
|||||| | ||||||||||||| ||||| ||| |||||||||||| |||||||||| | || ||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
4461309 |
gatttcaagtccaatctcccatttgttgcaaataaatctacagtttgctggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatg |
4461408 |
T |
|
| Q |
149 |
ctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctc |
248 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| |||||||| | ||| |||||||||| |
|
|
| T |
4461409 |
ctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctc |
4461508 |
T |
|
| Q |
249 |
tacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
|| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4461509 |
tatctgaaatttcattcacaaactcagatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatcca |
4461584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 35 - 324
Target Start/End: Original strand, 4626123 - 4626412
Alignment:
| Q |
35 |
ttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaa |
134 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||||| || |
|
|
| T |
4626123 |
ttcacattagcatcgatttccattccaatctcccattcattgcaaatatatctacaatttgttggctgatcagcaaaatttggccaacacagcattggaa |
4626222 |
T |
|
| Q |
135 |
ctccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacc |
234 |
Q |
| |
|
||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||| ||||| ||||||| |||||| |||||||| | |
|
|
| T |
4626223 |
ctccagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagct |
4626322 |
T |
|
| Q |
235 |
tgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||| || || ||||| ||||||||||||||||| |
|
|
| T |
4626323 |
tgcgattaggcctctatctgaaatttcattctcaaactcggatgacgaaataaatgagccaccaatcacaagatcaggcctaatgatcca |
4626412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4571131 - 4571433
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||| | ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| || |
|
|
| T |
4571131 |
cacctcatttctcttcacattagtatcgatttcgattccaatctcccatgtattgcagatatatctacagtttgctggctgatcagcaaaaaatggctaa |
4571230 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| |||||||| | ||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||| ||| ||||| | ||||| ||||| |
|
|
| T |
4571231 |
cacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgagtcaagaaaccaccaattgaaggatggttcaatactttctctt |
4571330 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| | |||||||| || |||||||||||| |||||||||||||| ||||||| |||||||||| || ||||| || |||||||| || ||||||||||| |
|
|
| T |
4571331 |
gcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaactccgatgacaaaacaactgagccaccaatgacaagatcgggcctaatgat |
4571430 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4571431 |
cca |
4571433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 9 - 324
Target Start/End: Complemental strand, 4260140 - 4259825
Alignment:
| Q |
9 |
tgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagc |
108 |
Q |
| |
|
||||||| |||| |||||| |||||||||||||||||||| ||||| ||||||||||||||| || || ||| ||||||||||||||||||||||||| |
|
|
| T |
4260140 |
tgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctgatcagc |
4260041 |
T |
|
| Q |
109 |
gaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggtta |
208 |
Q |
| |
|
|||||||||||||||| ||||| |||| | ||||| |||||||| ||||||| |||||||| |||||||| ||||||||||||| || || |||||| |
|
|
| T |
4260040 |
aaaaaatggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccatccgcaatgagttaagaatccaccaactgaagagtggttc |
4259941 |
T |
|
| Q |
209 |
agtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggt |
308 |
Q |
| |
|
||||||| |||||| |||||||| | ||||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||| || || | |||| |
|
|
| T |
4259940 |
agtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactcagatgacaaaataaaggagccaccaataatgaggt |
4259841 |
T |
|
| Q |
309 |
caggcctaatgatcca |
324 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4259840 |
caggcctaatgatcca |
4259825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 23 - 324
Target Start/End: Complemental strand, 4613690 - 4613389
Alignment:
| Q |
23 |
acctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaac |
122 |
Q |
| |
|
||||| ||||| |||||||| || | ||||| || ||||| |||||| |||||| |||||||| ||||||| ||||||||| |||||||||||||||| |
|
|
| T |
4613690 |
acctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctggctgatccgcgaaaaatggccaac |
4613591 |
T |
|
| Q |
123 |
acagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttg |
222 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| ||||||||| | ||||| |||||| |
|
|
| T |
4613590 |
acaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttg |
4613491 |
T |
|
| Q |
223 |
tggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatc |
322 |
Q |
| |
|
|||||||| | ||||||||||||||| |||||||||||||| ||||||| |||||||||| || |||||||| |||||||| ||||||||||||||| |
|
|
| T |
4613490 |
aggacaccagctcgcgattaggcctctatctgaaatttcattcacaaactctgatgacaaaacaactgagccgccaatgacaagatcaggcctaatgatc |
4613391 |
T |
|
| Q |
323 |
ca |
324 |
Q |
| |
|
|| |
|
|
| T |
4613390 |
ca |
4613389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4563870 - 4564172
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||| ||||| || ||||| |||| |||||| || |||||||||||| |||| | ||| |||||||||||||||||||||| | || ||||||||| |
|
|
| T |
4563870 |
cacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatggccaa |
4563969 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||| ||||||||| | ||||| ||| | |
|
|
| T |
4563970 |
cacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaatactttctcct |
4564069 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
|||||||||||| ||| |||| ||||||| |||||||||||||| |||||||||||||||||| | ||||| || ||||||||||||||||||||||| |
|
|
| T |
4564070 |
gtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgacaaaacgactgagccaccaatgacaaggtcaggcctaatgat |
4564169 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4564170 |
cca |
4564172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 23 - 324
Target Start/End: Original strand, 4557285 - 4557586
Alignment:
| Q |
23 |
acctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaac |
122 |
Q |
| |
|
||||| ||||| |||||||| || | ||||| || ||||||||||||| |||||| |||||||| ||||||| |||||||||||| ||||||||||||| |
|
|
| T |
4557285 |
acctcatctctcttcacattggtgtcaatttccatgccaatctcccatgtattgcaaatatatctgcagtttgctggctgatcagcaaaaaatggccaac |
4557384 |
T |
|
| Q |
123 |
acagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttg |
222 |
Q |
| |
|
||| ||||| |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||| | ||||| |||||| |
|
|
| T |
4557385 |
acaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaaggatggtttaatacttgctcttg |
4557484 |
T |
|
| Q |
223 |
tggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatc |
322 |
Q |
| |
|
|| ||||| || ||||||||||||||| ||||||||||||| ||||||| |||||||||| || ||||| || |||||||| || |||||||||||| |
|
|
| T |
4557485 |
cgggcaccagcccgcgattaggcctctatctgaaatttcattgacaaactccgatgacaaaacaactgagccaccgatgacaagatcgggcctaatgatc |
4557584 |
T |
|
| Q |
323 |
ca |
324 |
Q |
| |
|
|| |
|
|
| T |
4557585 |
ca |
4557586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 9 - 324
Target Start/End: Original strand, 4601935 - 4602250
Alignment:
| Q |
9 |
tgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagc |
108 |
Q |
| |
|
||||||| |||| || ||||||||| |||||||| |||| |||||| || |||||||||||| ||| || ||| |||||||||||||||||||||| || |
|
|
| T |
4601935 |
tgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaatctcccattcattacaaataaatctacagtttgttggctgatcggc |
4602034 |
T |
|
| Q |
109 |
gaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggtta |
208 |
Q |
| |
|
||||| |||||||||| ||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || || | ||||||||| |
|
|
| T |
4602035 |
aaaaaaaggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccgatcgaagggtggttc |
4602134 |
T |
|
| Q |
209 |
agtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggt |
308 |
Q |
| |
|
| |||| ||||||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||| | ||||| || |||||||| | |
|
|
| T |
4602135 |
aacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttgtaaactcagatgacaaaatcactgagccaccaatgacaagat |
4602234 |
T |
|
| Q |
309 |
caggcctaatgatcca |
324 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4602235 |
caggcctaatgatcca |
4602250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4585795 - 4586097
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| |||||||| || | | ||| || |||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||||| |
|
|
| T |
4585795 |
cacctcctctctcttcacattggtgtcaacttccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaa |
4585894 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||||| | ||||| ||||| |
|
|
| T |
4585895 |
cacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcaatacttgctctt |
4585994 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| || |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| || || || || |||||||| ||||| |||||||| |
|
|
| T |
4585995 |
gcgggcaccaacccgcgattaggcctctatctgaaatttcattcttaaactcagatgacaaaaccaaggaaccaccaatgacaagatcaggtctaatgat |
4586094 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4586095 |
cca |
4586097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4579591 - 4579893
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| ||||||||||| | |||||| |||||||| | ||||| |||||| | |||||| ||| || ||| ||||||||||||||||||||| |
|
|
| T |
4579591 |
cacctcctctctcttcacattagtgtcgatttcaattccaattttccatgtattgcataaatatctgcagcttactgggtgatcagcgaaaaatggccaa |
4579690 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| |||||||||| |||||||||| ||| |||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||| |
|
|
| T |
4579691 |
cacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagtacttgctctt |
4579790 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| |||||||| | | |||||||||||| |||||||||||||| ||||||| |||||||||| | |||||||| |||||||| || ||||||||||| |
|
|
| T |
4579791 |
gcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactccgatgacaaaacagctgagccgccgatgacaagatcgggcctaatgat |
4579890 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4579891 |
cca |
4579893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 29 - 324
Target Start/End: Complemental strand, 4267132 - 4266837
Alignment:
| Q |
29 |
tctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagca |
128 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||||||||||||| || ||| ||| ||||||||||||||||||||||| | || ||||||||||||| || |
|
|
| T |
4267132 |
tctctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaataaatctacagtttgttggctgatcaccaaagaatggccaacacaaca |
4267033 |
T |
|
| Q |
129 |
ttgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggaca |
228 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||| | |||| ||||||||||| |
|
|
| T |
4267032 |
ttggcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatccaccaatcgaagggtggttcaacactttatcttgtggaca |
4266933 |
T |
|
| Q |
229 |
ccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
||||| ||| ||||| |||||| |||||||||| || ||| ||||||||||||| || ||||| || |||||||| ||||||||||| ||||| |
|
|
| T |
4266932 |
ccaacttgctattagtcctctatctgaaatttctttaaaaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatcca |
4266837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 23 - 324
Target Start/End: Complemental strand, 4515093 - 4514792
Alignment:
| Q |
23 |
acctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaac |
122 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||||| |||||||||||| |||||| ||| |||||||||||||||| |||||| | || ||| |||||| |
|
|
| T |
4515093 |
acctcctctctcttcacattcatatcgatttcgatcccaatctcccattcattgcaaataaatctacagtttgttggttgatcaccaaagaattgccaac |
4514994 |
T |
|
| Q |
123 |
acagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttg |
222 |
Q |
| |
|
| ||||||| |||||||| |||||||| || |||||||| |||||||| ||||||||||||||||| ||||||| ||||||||| | |||| |||||| |
|
|
| T |
4514993 |
aaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaaaactttctcttg |
4514894 |
T |
|
| Q |
223 |
tggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatc |
322 |
Q |
| |
|
||||||||||| ||| |||||||||||| ||| |||||||||| |||||||||| ||||||| | ||||| || |||||||| ||||||||||||||| |
|
|
| T |
4514893 |
tggacaccaacttgctattaggcctctatctgcaatttcattcacaaactcagacgacaaaaccactgagccaccaatgacaagatcaggcctaatgatc |
4514794 |
T |
|
| Q |
323 |
ca |
324 |
Q |
| |
|
|| |
|
|
| T |
4514793 |
ca |
4514792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4574467 - 4574769
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
||||||||| || || |||||||||| |||||| |||||||||||||| |||||| |||||||| ||||||| ||||||||| | |||||||||||| |
|
|
| T |
4574467 |
cacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgaaaaaaatggccaa |
4574566 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|| | ||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| | || | ||||||| | ||||| ||||| |
|
|
| T |
4574567 |
cataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctctt |
4574666 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
|||||||||||| ||| ||||| |||||| |||||||||| ||| ||| |||||||| |||| | |||||| || |||||||| |||||||||||||| |
|
|
| T |
4574667 |
gtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgat |
4574766 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4574767 |
cca |
4574769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4592390 - 4592692
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| || |||||||||||| |||| | ||| |||||||||||||||||||||| || ||||||||| |
|
|
| T |
4592390 |
cacctcctctctctttacattcgtatcaatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcactaaagaatggccaa |
4592489 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| || |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| |
|
|
| T |
4592490 |
cacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggtttaatacttgctctt |
4592589 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| |||||||| | ||||||| ||||||| |||||||||||||| ||||||| |||||||||| || | ||| || |||||||| |||||||||||||| |
|
|
| T |
4592590 |
gaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaactccgatgacaaaacaattgtgccaccaatgacaagatcaggcctaatgat |
4592689 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4592690 |
cca |
4592692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 50 - 324
Target Start/End: Original strand, 4560693 - 4560966
Alignment:
| Q |
50 |
atttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgc |
149 |
Q |
| |
|
|||||| ||||||||| |||| |||||| |||||||| ||||||| ||||||||| || |||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
4560693 |
atttcgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgc |
4560792 |
T |
|
| Q |
150 |
tttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctct |
249 |
Q |
| |
|
|||| |||||||| |||||||| |||||||||||||||||||| | || |||||||| | ||||| ||||||||||||||||| ||| ||||| ||||| |
|
|
| T |
4560793 |
tttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctct |
4560892 |
T |
|
| Q |
250 |
acctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
| |||||||||| ||| ||| |||||||| |||| | |||||| || |||||||| ||||||||||||||||| |
|
|
| T |
4560893 |
atctgaaatttctttc-aaaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatcca |
4560966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4598330 - 4598632
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| ||||||||||| | |||| |||||||||||||||| |||||| |||||||| ||||| | | ||||||| |||||||| || ||| |
|
|
| T |
4598330 |
cacctcctctctcttcacattagtttcaattttgattccaatctcccattcattgcaaatatatctgcagttggcttgctgatccgcgaaaaagggacaa |
4598429 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| ||||| |||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||||| ||| ||||| | ||||| ||||| |
|
|
| T |
4598430 |
cacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaattgaaggatggtttaatacttgctctt |
4598529 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| ||||||| | ||| | || ||||||| |||||||||||||| ||||||| |||||||||| || |||||| || |||||||| |||||||||||||| |
|
|
| T |
4598530 |
gcagacaccagcttgcaactaagcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaatgat |
4598629 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4598630 |
cca |
4598632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 25 - 324
Target Start/End: Original strand, 4617184 - 4617483
Alignment:
| Q |
25 |
ctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacac |
124 |
Q |
| |
|
||||||||| |||||||| |||| |||||| || |||||||||||| ||| || ||| ||||||||| ||||||||| || || ||||||||||||||| |
|
|
| T |
4617184 |
ctcctctctcttcacattcgtatcgatttccataccaatctcccattcattacaaataaatctacagtctgttggctggtcggcaaaaaatggccaacac |
4617283 |
T |
|
| Q |
125 |
agcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtg |
224 |
Q |
| |
|
| ||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||| || |||| ||||||||| | |||| ||||||| |
|
|
| T |
4617284 |
aacattggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtg |
4617383 |
T |
|
| Q |
225 |
gacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
||||||||| ||| |||||||||||| ||| ||||||||| |||||||||||| ||||| | ||||| || |||||||| |||||||| |||||||| |
|
|
| T |
4617384 |
gacaccaacttgctattaggcctctatctgcaatttcatttgtaaactcagatgagaaaatcactgagccaccaatgacaagatcaggccttatgatcca |
4617483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 324
Target Start/End: Original strand, 4506023 - 4506318
Alignment:
| Q |
29 |
tctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagca |
128 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||| || |||||| ||| |||||||||||||||| |||||| | || || ||||||||||||| |
|
|
| T |
4506023 |
tctctattcacattagtatcaatttcgattccaatctccaattcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagca |
4506122 |
T |
|
| Q |
129 |
ttgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggaca |
228 |
Q |
| |
|
||| |||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| |||||| || | |||| |||||||| ||| |
|
|
| T |
4506123 |
ttggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaaca |
4506222 |
T |
|
| Q |
229 |
ccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
||| | ||| || |||| |||| ||||||||||||| ||||||| || ||||||| | ||||| || || ||||| ||||||||||||||||| |
|
|
| T |
4506223 |
ccagcttgctataaggcttctatctgaaatttcatttgcaaactctgaagacaaaaccactgagccaccaattacaagatcaggcctaatgatcca |
4506318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 9 - 321
Target Start/End: Complemental strand, 4256598 - 4256298
Alignment:
| Q |
9 |
tgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttgg-ctgatcag |
107 |
Q |
| |
|
||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||| | || ||| |||||||||||||||| |||||||| |
|
|
| T |
4256598 |
tgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatctcccattcgctacaaataaatctacagtttgttggtctgatcag |
4256499 |
T |
|
| Q |
108 |
cgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggtt |
207 |
Q |
| |
|
| |||||||||||||||| ||||| |||||| ||||| |||||||| ||||||| |||||||| |||||||||||||||||||||| || || |||||| |
|
|
| T |
4256498 |
caaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaatgagtcaagaatccaccaactgaagagtggtt |
4256399 |
T |
|
| Q |
208 |
aagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaagg |
307 |
Q |
| |
|
||||||| |||||| |||||||||| ||||||| |||||| || ||||||||||||||||||||| ||||| || ||||| ||| |
|
|
| T |
4256398 |
cagtacttgctcttgcggacaccaactctcgattagtcctcta-------------tccgaaactcagatgacaaaataaaggagccaccaatgacgagg |
4256312 |
T |
|
| Q |
308 |
tcaggcctaatgat |
321 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4256311 |
tcaggcctaatgat |
4256298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 143 - 324
Target Start/End: Complemental strand, 4299673 - 4299492
Alignment:
| Q |
143 |
catatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgatta |
242 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||| | | |||| ||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
243 |
ggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |
|
|
| T |
4299573 |
ggcctctatttgaaatttcattctcaaactcagatgacaaaataaacaagccgccaatgacaaggtctggcctaatgatcca |
4299492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 324
Target Start/End: Original strand, 4516467 - 4516782
Alignment:
| Q |
9 |
tgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagc |
108 |
Q |
| |
|
||||||| ||| |||||||||||| |||||||| |||| ||||| ||||||||||||| |||||| |||||||| || ||||||||||| ||||| |
|
|
| T |
4516467 |
tgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaatctcccattcattgcaaatatatctgcaatttgttggctgctcagc |
4516566 |
T |
|
| Q |
109 |
gaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggtta |
208 |
Q |
| |
|
||||| |||||||||| ||||| ||||| ||||| |||||||| | || || |||||||||||||||||||||||||| |||| || ||| ||||| |
|
|
| T |
4516567 |
aaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgagtcaagaatcctccaactgaaggatggttc |
4516666 |
T |
|
| Q |
209 |
agtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggt |
308 |
Q |
| |
|
| |||| |||||| |||||||| | ||| |||| ||||||| | ||| |||||||| |||| || ||||||||||||| |||||| || |||||||||| |
|
|
| T |
4516667 |
aacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaaaatcggatgacaaaataaccgagccaccaatgacaaggt |
4516766 |
T |
|
| Q |
309 |
caggcctaatgatcca |
324 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
4516767 |
caggcctaataatcca |
4516782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 22 - 316
Target Start/End: Original strand, 4457753 - 4458047
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||| ||||| |||||||| |||| |||||| || |||||||| ||| |||||| ||| ||||||| ||||||||| |||| | || ||||||||| |
|
|
| T |
4457753 |
cacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataaatctacaacttgttggcttatcaccaaagaatggccaa |
4457852 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
| |||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||||||||| || |||| ||||||||| | |||| |||| |
|
|
| T |
4457853 |
cgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatctt |
4457952 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggccta |
316 |
Q |
| |
|
|||||||||||| ||| |||| ||||||| | ||| |||||||| |||| || |||||||||| || |||||| || |||||||| ||||||||| |
|
|
| T |
4457953 |
gtggacaccaacttgctattaagcctctatcagaagtttcattcacaaaatccgatgacaaaacaaccgagccaccaatgacaagatcaggccta |
4458047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4469962 - 4470264
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||| ||||| ||||||| ||| |||||| | ||||||||||||| |||||| ||| ||||||| |||| | |||||||| | || ||||||||| |
|
|
| T |
4469962 |
cacctcatctctcttcacatctttatcgatttcaagtccaatctcccattcattgcaaataaatctacaatttgctagctgatcaccaaagaatggccaa |
4470061 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||| |||| ||||||||| ||||||| ||||| |
|
|
| T |
4470062 |
cacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcagtacttgctctt |
4470161 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| |||||||| |||||||||||||| |||||||| |||| ||| ||| ||||| |||| | ||||||||| |||||||| || ||||||||||| |
|
|
| T |
4470162 |
gaggacaccagttcacgattaggcctctatctgaaattccatttacaatctctgatgagaaaactaccgagccgccaatgacaagatcgggcctaatgat |
4470261 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4470262 |
cca |
4470264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 29 - 282
Target Start/End: Original strand, 4480859 - 4481112
Alignment:
| Q |
29 |
tctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagca |
128 |
Q |
| |
|
||||| |||||||| |||| |||||||| ||||||||||||| |||||| ||| ||||| ||| | ||||||||| || || ||||||||||||| || |
|
|
| T |
4480859 |
tctctcttcacattggtatcgatttcgagtccaatctcccattcattgcaaataattctacggttaggtggctgatcggcaaagaatggccaacacaaca |
4480958 |
T |
|
| Q |
129 |
ttgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggaca |
228 |
Q |
| |
|
||| ||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||| || |||| ||||||||| | |||| |||||||||||| |
|
|
| T |
4480959 |
ttggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatccgccgattgaagggtggttcaaaactttctcttgtggaca |
4481058 |
T |
|
| Q |
229 |
ccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaa |
282 |
Q |
| |
|
||||| ||| |||||||||||| ||||||||| ||| | ||||||||||||| |
|
|
| T |
4481059 |
ccaacttgctattaggcctctatttgaaatttctttcaaatactcagatgacaa |
4481112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 324
Target Start/End: Original strand, 3171979 - 3172202
Alignment:
| Q |
101 |
tgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcag |
200 |
Q |
| |
|
|||||||| |||||||||| ||||| ||||| | ||||||||||| ||||| |||||||| |||||||| || |||||||||||||| ||||||| || |
|
|
| T |
3171979 |
tgatcagcaaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaattgaag |
3172078 |
T |
|
| Q |
201 |
ggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccat |
300 |
Q |
| |
|
| ||||| | |||| |||||| |||||||||| ||| |||||||||||| |||||||||||||| ||||||| |||||||||| || |||||| || || |
|
|
| T |
3172079 |
gatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgagccaccaat |
3172178 |
T |
|
| Q |
301 |
gacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
|||||| ||||||||||| ||||| |
|
|
| T |
3172179 |
gacaagatcaggcctaataatcca |
3172202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 101 - 324
Target Start/End: Complemental strand, 4490249 - 4490026
Alignment:
| Q |
101 |
tgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcag |
200 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| |||||||||||||| || || || |||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
4490249 |
tgatcagcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatccaccaattgaag |
4490150 |
T |
|
| Q |
201 |
ggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccat |
300 |
Q |
| |
|
|||| || | ||| | ||||||||||||||||| ||| ||||| |||||| |||||||||| ||| ||| ||||||||||| | ||||| || || |
|
|
| T |
4490149 |
ggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgacaacacctgtgagccaccaat |
4490050 |
T |
|
| Q |
301 |
gacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
||||| ||||||||||||||||| |
|
|
| T |
4490049 |
aacaagatcaggcctaatgatcca |
4490026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 4568215 - 4568517
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||||||||| |||||| | ||| || |||||||| |||| ||||||||| |||| ||||| |||||| |
|
|
| T |
4568215 |
cacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaatatatctgcagtatgttggctgctcagaaaaaaaaggccaa |
4568314 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|| | ||||| |||| ||||| |||||||| || || ||||||||||||||||||||||||| |||| || ||||||||| | |||| ||||| |
|
|
| T |
4568315 |
cataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatcgtccaactgaagggtggttcaacacttgctctt |
4568414 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| |||||||| | ||| ||| |||||||| | ||| || ||||| ||||||| ||||||||||||| ||||| || |||||||| | |||||||||||| |
|
|
| T |
4568415 |
gcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcggatgacaaaataactgagccaccaatgacaagctaaggcctaatgat |
4568514 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
4568515 |
cca |
4568517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 250
Target Start/End: Original strand, 4493141 - 4493342
Alignment:
| Q |
49 |
gatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatg |
148 |
Q |
| |
|
|||||| | |||||||||| || |||||| || ||||||||||||||||||||||| || || |||||||||| ||||| ||||| ||||||||| |
|
|
| T |
4493141 |
gatttctactccaatctccaattcattgcaaatcaatctacagtttgttggctgatcactaaagaaaggccaacacaacattggcactccggcacatatg |
4493240 |
T |
|
| Q |
149 |
ctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctc |
248 |
Q |
| |
|
||| ||| ||||| |||||||||||||||||||||||||||||||| | | ||||||| || | || ||||||||||||||||| || |||||||||| |
|
|
| T |
4493241 |
tttttggtagttgagttccatccacaatgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctc |
4493340 |
T |
|
| Q |
249 |
ta |
250 |
Q |
| |
|
|| |
|
|
| T |
4493341 |
ta |
4493342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 282
Target Start/End: Complemental strand, 4504295 - 4504110
Alignment:
| Q |
97 |
tggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaatt |
196 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||| ||||||||||| | ||||| |||||||| |||||||||||||||||||||||||| || ||| |
|
|
| T |
4504295 |
tggctgatcagaaaaaaatggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcctccgatt |
4504196 |
T |
|
| Q |
197 |
gcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaa |
282 |
Q |
| |
|
| ||||||||| | |||| |||||||||||||||| ||| | || |||||| ||| |||||||| |||| ||||||||||| |
|
|
| T |
4504195 |
gaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaaaatcagatgacaa |
4504110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 324
Target Start/End: Complemental strand, 4391995 - 4391794
Alignment:
| Q |
127 |
cattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtgga |
226 |
Q |
| |
|
||||| ||||| || ||| |||||||| ||| ||| || ||||||||||| || |||||||||| |||| ||||||||| | ||||| ||||| ||| |
|
|
| T |
4391995 |
cattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcgga |
4391896 |
T |
|
| Q |
227 |
caccaacctgcgattagg----cctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatc |
322 |
Q |
| |
|
||||| | ||||| ||| |||||| ||||||||||||||||| ||||| || |||||| | | || | ||| |||||||||||| ||||||||||| |
|
|
| T |
4391895 |
caccatcttgcgactagatagacctctatctgaaatttcattctcatactcatataacaaaacacatgacctgccaatgacaaggtcaagcctaatgatc |
4391796 |
T |
|
| Q |
323 |
ca |
324 |
Q |
| |
|
|| |
|
|
| T |
4391795 |
ca |
4391794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 4299719 - 4299671
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccat |
70 |
Q |
| |
|
|||||||||||| ||||||| |||| |||||||||||||||||||||| |
|
|
| T |
4299719 |
cacctcctctctcctcacatttgtatcgatttcgattccaatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 324
Target Start/End: Complemental strand, 4672 - 4357
Alignment:
| Q |
9 |
tgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagc |
108 |
Q |
| |
|
|||||| ||||| |||| |||||| ||||||||||||| ||||| || ||| |||||||| || | ||||||| | | |||||||||||||||| || |
|
|
| T |
4672 |
tgatcatattcgttaccttctctctcttcacattagtatcaatttccataccagtctcccatatatgggagatataccgatagtttgttggctgatcggc |
4573 |
T |
|
| Q |
109 |
gaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggtta |
208 |
Q |
| |
|
||||||||||||||||| ||||| ||||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4572 |
gaaaaatggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttc |
4473 |
T |
|
| Q |
209 |
agtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggt |
308 |
Q |
| |
|
||||||| ||||||||||||||| | || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4472 |
agtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgacaaaataaacgagccgccaatgacaaggt |
4373 |
T |
|
| Q |
309 |
caggcctaatgatcca |
324 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4372 |
caggcctaatgatcca |
4357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 171; Significance: 8e-92; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 22 - 324
Target Start/End: Complemental strand, 3692 - 3390
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||| ||||| ||||||| ||| |||||| | ||||||||||||| ||||| ||| ||||||||||||||||||||||| | || ||||||||| |
|
|
| T |
3692 |
cacctcatctctcttcacatccatatcgatttcaagtccaatctcccattcgttgcaaataaatctacagtttgttggctgatcaccaaagaatggccaa |
3593 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||| |
|
|
| T |
3592 |
caaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggatcagtacttgctctt |
3493 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
|||||||||| | || ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
3492 |
gtggacaccagcttgtgattaggcctctatctgaaatttcattctcaaattctgatgacaaaataaacgagccgccaatgacaagatcaggcctaatgat |
3393 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
3392 |
cca |
3390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 324
Target Start/End: Original strand, 1281273 - 1281575
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||| || ||||||| |||| ||| || ||| ||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
1281273 |
cacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaaatggccaa |
1281372 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||| ||||||||| | |||| ||||| |
|
|
| T |
1281373 |
cacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcaacactttctctt |
1281472 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
|||||||||||| ||| |||||||||||| |||||||||||||| |||| |||||||||||||| | |||||||| |||||||| ||||||||| |||| |
|
|
| T |
1281473 |
gtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgat |
1281572 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
1281573 |
cca |
1281575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 23 - 324
Target Start/End: Original strand, 3086580 - 3086881
Alignment:
| Q |
23 |
acctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaac |
122 |
Q |
| |
|
||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||| | |||||||||||| |
|
|
| T |
3086580 |
acctcctctctcttcacattagtatcgatttcaattccaatctcccatatattgcagatatatctacagtttattggttgatctccataaaatggccaac |
3086679 |
T |
|
| Q |
123 |
acagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttg |
222 |
Q |
| |
|
||| ||||| ||||||||| || |||||| ||||| |||||||||||||||||||||||||||||||||| |||||| || | ||||| |||||| |
|
|
| T |
3086680 |
acaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatgagtcaagaatccaccaattgaagggtgattcaatacttgctcttg |
3086779 |
T |
|
| Q |
223 |
tggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatc |
322 |
Q |
| |
|
|||||||| | ||||||||| |||||| |||||||||| ||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||| |
|
|
| T |
3086780 |
cggacaccagcttgcgattagacctctatctgaaatttctttctcaaactcagatgacataataaaggagccgccaatgacaagatcaggcctaatgatc |
3086879 |
T |
|
| Q |
323 |
ca |
324 |
Q |
| |
|
|| |
|
|
| T |
3086880 |
ca |
3086881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 41511484 - 41511445
Alignment:
| Q |
158 |
gttgaattccatccacaatgagtcaagaatccaccaattg |
197 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
41511484 |
gttgaattccaaccacaatgagtcaaaaatccaccaattg |
41511445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 48532826 - 48532780
Alignment:
| Q |
158 |
gttgaattccatccacaatgagtcaagaatccaccaattgcagggtg |
204 |
Q |
| |
|
|||||||||||||||||||| || |||||||| ||||||| |||||| |
|
|
| T |
48532826 |
gttgaattccatccacaatgtgttaagaatcctccaattgaagggtg |
48532780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 324
Target Start/End: Complemental strand, 20863816 - 20863514
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| || ||||| || | |||||||| |||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||||||||| |
|
|
| T |
20863816 |
cacctcctctctcttgacattggtgtcaatttcgatcccaatctcccatttgttgcaaatgtatctgcagtttgtcggctgatcagcaaaaaatggccag |
20863717 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||| ||||||||||||||||| | ||||||||||||| ||| ||||| | || | ||||| |
|
|
| T |
20863716 |
cacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagttagaaatccaccaattgaaggatggttcaacaccttctctt |
20863617 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||| ||||| | |||||| || |||||||| |||||||||||||| |
|
|
| T |
20863616 |
gtggacaccaactcgcgattaggcctctatctgaaatttcattcacaaacgcagatgaaaaaatcaccgagccaccaatgacaagatcaggcctaatgat |
20863517 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
20863516 |
cca |
20863514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 22 - 324
Target Start/End: Complemental strand, 16686240 - 16685938
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||| ||||| |||||||| || | ||||| || |||||||||||| |||||| |||||||| || |||| |||||||||||| |||||||||||| |
|
|
| T |
16686240 |
cacctcatctctcttcacattggtgtcaatttccatgccaatctcccattcattgcaaatatatctgcattttgctggctgatcagcaaaaaatggccaa |
16686141 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
|||| ||||| |||||||||| |||| ||||| |||||||| ||||||||||||||||| ||||||||||| |||| ||| ||||| | ||||| ||||| |
|
|
| T |
16686140 |
cacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgagttaagaatccaccgattgaaggatggtttaatacttgctctt |
16686041 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgat |
321 |
Q |
| |
|
| || ||||| | |||||||||| |||| |||| |||||||||| ||||||||||||||||| | || |||| |||||||| |||| ||||||||| |
|
|
| T |
16686040 |
gcgggcaccagctcgcgattaggcttctatctgagatttcattcttaaactcagatgacaaaaccacggaaccgcaaatgacaagatcagacctaatgat |
16685941 |
T |
|
| Q |
322 |
cca |
324 |
Q |
| |
|
||| |
|
|
| T |
16685940 |
cca |
16685938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 1674390 - 1674687
Alignment:
| Q |
27 |
cctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacag |
126 |
Q |
| |
|
||||||| |||||||| |||| ||||| || ||||||| |||| ||| || ||| ||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1674390 |
cctctctcttcacattcgtatcaatttccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaa |
1674489 |
T |
|
| Q |
127 |
cattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtgga |
226 |
Q |
| |
|
||||| |||||||| ||||||||||| |||||||| |||||||| || || ||||||||||| || |||| ||||||||| | |||| |||||||||| |
|
|
| T |
1674490 |
cattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatccgccgattgaagggtggttcaacactttctcttgtgga |
1674589 |
T |
|
| Q |
227 |
caccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
|||||| || |||||||||||| |||||||||| ||| ||||||||||||||||| | ||||| || |||||||| ||||||||| ||||||| |
|
|
| T |
1674590 |
caccaatttgatattaggcctctatctgaaatttctttcataaactcagatgacaaaaccactgagccaccaatgacaagatcaggcctagtgatcca |
1674687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 1969181 - 1969141
Alignment:
| Q |
157 |
ggttgaattccatccacaatgagtcaagaatccaccaattg |
197 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1969181 |
ggttgaattccagccacaatgagtcaagaatccaccaattg |
1969141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 124; Significance: 9e-64; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 29 - 324
Target Start/End: Original strand, 24103165 - 24103460
Alignment:
| Q |
29 |
tctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagca |
128 |
Q |
| |
|
||||| |||||||| |||| |||||||| ||||||||||||| || ||| ||| |||||||||||||||| |||||| | || ||||||||||||| || |
|
|
| T |
24103165 |
tctctcttcacatttgtatcgatttcgagtccaatctcccattcatagcaaataaatctacagtttgttggttgatcaccaaagaatggccaacacaaca |
24103264 |
T |
|
| Q |
129 |
ttgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggaca |
228 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| | ||||||||| | |||| ||||||||||| |
|
|
| T |
24103265 |
ttggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggaca |
24103364 |
T |
|
| Q |
229 |
ccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
||||| ||| ||||| |||||| |||||| ||| || ||| ||||||||||||| || ||||| || |||||||| ||||||||||| ||||| |
|
|
| T |
24103365 |
ccaacttgctattagtcctctatctgaaacttctttaaaaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatcca |
24103460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 50 - 324
Target Start/End: Complemental strand, 28000044 - 27999770
Alignment:
| Q |
50 |
atttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgc |
149 |
Q |
| |
|
||||| || ||||||| |||| ||| || ||| ||||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||| |
|
|
| T |
28000044 |
atttccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaatgaccaacacaacattggcactccagcgcatatgc |
27999945 |
T |
|
| Q |
150 |
tttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctct |
249 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||||| || | |||| ||||||||| | |||| |||||||||||||||| || ||||||||||| |
|
|
| T |
27999944 |
tttcggtggttgagttccatccgcagtgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctct |
27999845 |
T |
|
| Q |
250 |
acctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
| |||||||||| ||| ||||||||||||||||| | ||||| || |||||||| | ||||||| ||||||| |
|
|
| T |
27999844 |
atctgaaatttctttcctaaactcagatgacaaaaccactgagccaccaatgacaagattaggcctagtgatcca |
27999770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 20155290 - 20155251
Alignment:
| Q |
158 |
gttgaattccatccacaatgagtcaagaatccaccaattg |
197 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
20155290 |
gttgaattccatccacaatgtgtcaagaatcctccaattg |
20155251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 247
Target Start/End: Complemental strand, 3657 - 3433
Alignment:
| Q |
22 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
121 |
Q |
| |
|
|||||||||||| |||||||| | || ||||| |||||||||||||| ||| || || ||||||||||||||| || || | ||||||||||||| |
|
|
| T |
3657 |
cacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttgagtgttcggggaaaaatggccaa |
3558 |
T |
|
| Q |
122 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
221 |
Q |
| |
|
| |||||||| |||||||| ||| |||||||| ||||||| ||||||||||||||||| ||||||||||||| | ||||||||| | |||| ||||| |
|
|
| T |
3557 |
cgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacacttgctctt |
3459 |
T |
|
| Q |
222 |
gtggacaccaacctgcgattaggcct |
247 |
Q |
| |
|
|||||||| | ||||| ||||||| |
|
|
| T |
3458 |
acggacaccatcttgcgactaggcct |
3433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 324
Target Start/End: Complemental strand, 3261 - 3180
Alignment:
| Q |
243 |
ggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatcca |
324 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| || ||||| | | || ||||| ||||||||||||| |||||||||||| |
|
|
| T |
3261 |
ggcctctatctgaagtttcattctcaaactcatataacaaagcacatgatccgccaatgacaaggtcagacctaatgatcca |
3180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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