View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5946-Insertion-7 (Length: 403)
Name: NF5946-Insertion-7
Description: NF5946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5946-Insertion-7 |
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Alignment Details
Target: chr4 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 27725017 - 27724909
Alignment:
| Q |
9 |
cacagaaacccgaaggaccaccaaagcttgcaaattcaacagccgtaannnnnnnctggtctggacatgtgataaaagcttctggagtcagattctctcc |
108 |
Q |
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||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||| || |
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| T |
27725017 |
cacagaaacccgaaggatcaccaaagcttgcaaactcaacagccgtaatttttttctggtccggacacgtgataaaagcttctggagtcagattctcccc |
27724918 |
T |
|
| Q |
109 |
cacaggttc |
117 |
Q |
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|||| |||| |
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| T |
27724917 |
cacacgttc |
27724909 |
T |
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