View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5946_low_6 (Length: 254)

Name: NF5946_low_6
Description: NF5946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5946_low_6
NF5946_low_6
[»] chr5 (21 HSPs)
chr5 (34-138)||(16995582-16995683)
chr5 (163-235)||(16995450-16995522)
chr5 (84-125)||(32008170-32008211)
chr5 (83-119)||(39938053-39938089)
chr5 (83-113)||(16273041-16273071)
chr5 (90-137)||(41371056-41371105)
chr5 (92-138)||(24090556-24090604)
chr5 (83-120)||(27021305-27021342)
chr5 (84-113)||(27263716-27263745)
chr5 (84-113)||(31172176-31172205)
chr5 (90-119)||(33761429-33761458)
chr5 (90-119)||(33857934-33857963)
chr5 (83-116)||(38599751-38599784)
chr5 (84-113)||(41879682-41879711)
chr5 (83-111)||(248754-248782)
chr5 (83-119)||(16202507-16202543)
chr5 (83-111)||(25782690-25782718)
chr5 (83-111)||(35395043-35395071)
chr5 (88-120)||(35695386-35695418)
chr5 (177-217)||(38600648-38600688)
chr5 (83-119)||(42422383-42422419)
[»] chr2 (15 HSPs)
chr2 (83-138)||(32217032-32217089)
chr2 (83-138)||(32226335-32226392)
chr2 (90-119)||(740479-740508)
chr2 (90-119)||(741165-741194)
chr2 (84-113)||(2383240-2383269)
chr2 (83-137)||(25083526-25083582)
chr2 (84-113)||(34196351-34196380)
chr2 (84-113)||(36213921-36213950)
chr2 (90-119)||(38502385-38502414)
chr2 (83-112)||(39822487-39822516)
chr2 (84-113)||(40324260-40324289)
chr2 (83-111)||(15508751-15508779)
chr2 (83-119)||(19317643-19317679)
chr2 (83-119)||(32630611-32630647)
chr2 (83-111)||(42651929-42651957)
[»] chr7 (17 HSPs)
chr7 (91-137)||(20245119-20245167)
chr7 (91-137)||(20249157-20249205)
chr7 (90-138)||(20266953-20267003)
chr7 (92-139)||(8721431-8721480)
chr7 (84-113)||(5096398-5096427)
chr7 (84-113)||(14240750-14240779)
chr7 (84-113)||(24052535-24052564)
chr7 (83-129)||(32675728-32675776)
chr7 (84-113)||(35365097-35365126)
chr7 (83-119)||(14774340-14774376)
chr7 (83-119)||(15224793-15224829)
chr7 (83-111)||(15647014-15647042)
chr7 (94-131)||(20233122-20233161)
chr7 (84-120)||(22702613-22702649)
chr7 (97-125)||(37250785-37250813)
chr7 (83-119)||(38321422-38321458)
chr7 (83-119)||(45279969-45280005)
[»] chr8 (19 HSPs)
chr8 (83-119)||(15147690-15147726)
chr8 (83-119)||(18887313-18887349)
chr8 (84-119)||(5934639-5934674)
chr8 (171-217)||(1284152-1284198)
chr8 (89-119)||(41372662-41372692)
chr8 (84-113)||(415328-415357)
chr8 (84-113)||(1658059-1658088)
chr8 (84-113)||(6336006-6336035)
chr8 (84-113)||(14031644-14031673)
chr8 (83-112)||(29283845-29283874)
chr8 (84-113)||(36802027-36802056)
chr8 (84-113)||(37402089-37402118)
chr8 (90-119)||(45521631-45521660)
chr8 (83-111)||(444552-444580)
chr8 (83-119)||(2293004-2293040)
chr8 (83-119)||(6235372-6235408)
chr8 (83-111)||(15898926-15898954)
chr8 (83-115)||(41368328-41368360)
chr8 (83-111)||(45440817-45440845)
[»] chr1 (15 HSPs)
chr1 (83-115)||(16418049-16418081)
chr1 (83-119)||(25704327-25704363)
chr1 (83-119)||(40368161-40368197)
chr1 (84-119)||(21968025-21968060)
chr1 (83-125)||(10390495-10390537)
chr1 (89-119)||(41103591-41103621)
chr1 (84-113)||(8028568-8028597)
chr1 (84-113)||(10164179-10164208)
chr1 (84-113)||(18314166-18314195)
chr1 (83-131)||(42470307-42470356)
chr1 (90-119)||(47401877-47401906)
chr1 (83-139)||(1146612-1146667)
chr1 (83-111)||(9306395-9306423)
chr1 (90-122)||(31467104-31467136)
chr1 (83-111)||(37705716-37705744)
[»] chr4 (20 HSPs)
chr4 (84-119)||(36196603-36196638)
chr4 (88-118)||(47683578-47683608)
chr4 (84-113)||(22160507-22160536)
chr4 (84-113)||(23316056-23316085)
chr4 (84-113)||(25921132-25921161)
chr4 (84-113)||(31106446-31106475)
chr4 (84-113)||(36825430-36825459)
chr4 (90-119)||(47806416-47806445)
chr4 (83-111)||(594449-594477)
chr4 (83-111)||(627988-628016)
chr4 (83-111)||(12214449-12214477)
chr4 (83-111)||(21053984-21054012)
chr4 (90-122)||(28510014-28510046)
chr4 (85-138)||(28703936-28703991)
chr4 (85-117)||(28715310-28715342)
chr4 (83-111)||(39670319-39670347)
chr4 (83-111)||(47045047-47045075)
chr4 (171-223)||(47393540-47393592)
chr4 (83-119)||(48458570-48458606)
chr4 (83-111)||(54857695-54857723)
[»] chr3 (20 HSPs)
chr3 (174-217)||(51103231-51103274)
chr3 (83-113)||(36640459-36640489)
chr3 (83-113)||(38358808-38358838)
chr3 (84-113)||(3806817-3806846)
chr3 (84-113)||(21301658-21301687)
chr3 (84-113)||(25441368-25441397)
chr3 (84-113)||(33706520-33706549)
chr3 (85-131)||(35963904-35963952)
chr3 (82-111)||(36174386-36174415)
chr3 (84-113)||(37980446-37980475)
chr3 (90-119)||(39199037-39199066)
chr3 (84-113)||(44176898-44176927)
chr3 (84-113)||(44183580-44183609)
chr3 (90-119)||(47411190-47411219)
chr3 (84-113)||(51924327-51924356)
chr3 (90-131)||(1148891-1148934)
chr3 (83-111)||(28391447-28391475)
chr3 (83-119)||(35258790-35258826)
chr3 (84-124)||(42522065-42522105)
chr3 (83-119)||(47415876-47415912)
[»] scaffold0035 (1 HSPs)
scaffold0035 (84-113)||(81976-82005)
[»] chr6 (5 HSPs)
chr6 (84-113)||(31383579-31383608)
chr6 (83-119)||(4577915-4577951)
chr6 (83-111)||(6875007-6875035)
chr6 (83-111)||(31203919-31203947)
chr6 (83-111)||(34209942-34209970)
[»] scaffold1379 (1 HSPs)
scaffold1379 (83-111)||(1545-1573)


Alignment Details
Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 16995683 - 16995582
Alignment:
Q  34 gttgcacaatttatttattataatggctagcattcagaataaactatccttatgaaattttgattttgattaaaattataggtatatattttgcacttac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16995683 gttgcacaatttatttattataatggctagcattcagaataaactat---tatgaaattttgattttgattaaaattataggtatatattttgcacttac 16995587  T
Q  134 atatt 138  Q
    |||||    
T  16995586 atatt 16995582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 16995522 - 16995450
Alignment:
Q  163 tgttatcttttttgaatgacactaacaatataacattcttacaggaaaatttgttaaaagagtacaattgaaa 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16995522 tgttatcttttttgaatgacactaacaatataacattcttacaggaaaatttgttaaaagagtataattgaaa 16995450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 32008211 - 32008170
Alignment:
Q  84 tatgaaattttgattttgattaaaattataggtatatatttt 125  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  32008211 tatgaaattttgattttgattaaaattatatgtataaatttt 32008170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 39938089 - 39938053
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39938089 ttatgaaattttgattttgattaaaattatatgtata 39938053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 113
Target Start/End: Original strand, 16273041 - 16273071
Alignment:
Q  83 ttatgaaattttgattttgattaaaattata 113  Q
    |||||||||||||||||||||||||||||||    
T  16273041 ttatgaaattttgattttgattaaaattata 16273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 41371105 - 41371056
Alignment:
Q  90 attttgattttgattaaaattataggtat--atattttgcacttacatat 137  Q
    ||||||||||| |||||||||||||||||  ||||||||||||| |||||    
T  41371105 attttgattttaattaaaattataggtatagatattttgcactttcatat 41371056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 24090556 - 24090604
Alignment:
Q  92 tttgattttgattaaaattataggtatata--ttttgcacttacatatt 138  Q
    |||||||||||||||||||||||||||| |  |||||||||| ||||||    
T  24090556 tttgattttgattaaaattataggtataaaagttttgcactttcatatt 24090604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 120
Target Start/End: Original strand, 27021305 - 27021342
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtatat 120  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  27021305 ttatgaaatttttattttgattaaaattataagtatat 27021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 27263716 - 27263745
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  27263716 tatgaaattttgattttgattaaaattata 27263745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 31172176 - 31172205
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  31172176 tatgaaattttgattttgattaaaattata 31172205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 33761458 - 33761429
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  33761458 attttgattttgattaaaattataggtata 33761429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 33857963 - 33857934
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  33857963 attttgattttgattaaaattataggtata 33857934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 38599751 - 38599784
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggt 116  Q
    ||||||||||| ||||||||||||||||||||||    
T  38599751 ttatgaaatttagattttgattaaaattataggt 38599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 41879682 - 41879711
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  41879682 tatgaaattttgattttgattaaaattata 41879711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 248782 - 248754
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  248782 ttatgaaattttgattttgattaaaatta 248754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 16202543 - 16202507
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||| |||| |||||    
T  16202543 ttatgaaattttgattttgattaaaactataagtata 16202507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 25782718 - 25782690
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  25782718 ttatgaaattttgattttgattaaaatta 25782690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 35395043 - 35395071
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  35395043 ttatgaaattttgattttgattaaaatta 35395071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 35695418 - 35695386
Alignment:
Q  88 aaattttgattttgattaaaattataggtatat 120  Q
    ||||||||||||||||||||||| |||||||||    
T  35695418 aaattttgattttgattaaaattctaggtatat 35695386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 38600648 - 38600688
Alignment:
Q  177 aatgacactaacaatataacattcttacaggaaaatttgtt 217  Q
    |||||||| |||||||||||||| ||| |||||||||||||    
T  38600648 aatgacaccaacaatataacattgttataggaaaatttgtt 38600688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 42422419 - 42422383
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  42422419 ttatgaaatttagattttgattaaaattatatgtata 42422383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 32217032 - 32217089
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata--tattttgcacttacatatt 138  Q
    ||||| ||||||||||||||||||||||||| |||||  |||||||||||| ||||||    
T  32217032 ttatgcaattttgattttgattaaaattataagtataattattttgcactttcatatt 32217089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 32226335 - 32226392
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata--tattttgcacttacatatt 138  Q
    ||||| ||||||||||||||||||||||| | |||||  |||||||||||| ||||||    
T  32226335 ttatgcaattttgattttgattaaaattagaagtataattattttgcactttcatatt 32226392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 740479 - 740508
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  740479 attttgattttgattaaaattataggtata 740508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 741165 - 741194
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  741165 attttgattttgattaaaattataggtata 741194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 2383269 - 2383240
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  2383269 tatgaaattttgattttgattaaaattata 2383240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 25083526 - 25083582
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtat--atattttgcacttacatat 137  Q
    |||||||||||| ||||||| |||||||||||||||  |||||||| |||| |||||    
T  25083526 ttatgaaattttaattttgaataaaattataggtataaatattttgtactttcatat 25083582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 34196380 - 34196351
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  34196380 tatgaaattttgattttgattaaaattata 34196351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 36213950 - 36213921
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  36213950 tatgaaattttgattttgattaaaattata 36213921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 38502414 - 38502385
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  38502414 attttgattttgattaaaattataggtata 38502385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 112
Target Start/End: Original strand, 39822487 - 39822516
Alignment:
Q  83 ttatgaaattttgattttgattaaaattat 112  Q
    ||||||||||||||||||||||||||||||    
T  39822487 ttatgaaattttgattttgattaaaattat 39822516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 40324260 - 40324289
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  40324260 tatgaaattttgattttgattaaaattata 40324289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 15508779 - 15508751
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  15508779 ttatgaaattttgattttgattaaaatta 15508751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 19317643 - 19317679
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||| |||||||||||| |||||    
T  19317643 ttatgaaattttgattttcattaaaattatatgtata 19317679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 32630611 - 32630647
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  32630611 ttatgaaatttagattttgattaaaattatatgtata 32630647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 42651957 - 42651929
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  42651957 ttatgaaattttgattttgattaaaatta 42651929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 20245167 - 20245119
Alignment:
Q  91 ttttgattttgattaaaattataggtat--atattttgcacttacatat 137  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  20245167 ttttgattttgattaaaattataggtatagatattttgcactttcatat 20245119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 20249205 - 20249157
Alignment:
Q  91 ttttgattttgattaaaattataggtat--atattttgcacttacatat 137  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  20249205 ttttgattttgattaaaattataggtatagatattttgcactttcatat 20249157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 20267003 - 20266953
Alignment:
Q  90 attttgattttgattaaaattataggtat--atattttgcacttacatatt 138  Q
    |||||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  20267003 attttgattttgattaaaattataggtatagatatattgcactttcatatt 20266953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 8721431 - 8721480
Alignment:
Q  92 tttgattttgattaaaattataggtat--atattttgcacttacatatta 139  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||    
T  8721431 tttgattttgattaaaattctaggtattgatattttgcactttcatatta 8721480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 5096398 - 5096427
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  5096398 tatgaaattttgattttgattaaaattata 5096427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 14240779 - 14240750
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  14240779 tatgaaattttgattttgattaaaattata 14240750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 24052535 - 24052564
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  24052535 tatgaaattttgattttgattaaaattata 24052564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 32675776 - 32675728
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtat--atattttgcac 129  Q
    |||| |||||||||||||||||||||||||| ||||  |||||||||||    
T  32675776 ttataaaattttgattttgattaaaattatatgtatagatattttgcac 32675728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 35365126 - 35365097
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  35365126 tatgaaattttgattttgattaaaattata 35365097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 14774340 - 14774376
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  14774340 ttataaaattttaattttgattaaaattataggtata 14774376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 15224793 - 15224829
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  15224793 ttataaaattttaattttgattaaaattataggtata 15224829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 15647014 - 15647042
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  15647014 ttatgaaattttgattttgattaaaatta 15647042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 20233122 - 20233161
Alignment:
Q  94 tgattttgattaaaattataggtat--atattttgcactt 131  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  20233122 tgattttgattaaaattataggtataaatattttgcactt 20233161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 22702649 - 22702613
Alignment:
Q  84 tatgaaattttgattttgattaaaattataggtatat 120  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  22702649 tatgaaattttgatttttattaaaattatatgtatat 22702613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 125
Target Start/End: Complemental strand, 37250813 - 37250785
Alignment:
Q  97 ttttgattaaaattataggtatatatttt 125  Q
    |||||||||||||||||||||||||||||    
T  37250813 ttttgattaaaattataggtatatatttt 37250785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 38321458 - 38321422
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  38321458 ttatgaaattttgatttttattaaaattatagatata 38321422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 45279969 - 45280005
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||| |||| |||||    
T  45279969 ttatgaaattttgattttgattaaaagtatatgtata 45280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 15147690 - 15147726
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15147690 ttatgaaattttgattttgattaaaattataagtata 15147726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 18887313 - 18887349
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18887313 ttatgaaattttgattttgattaaaattatatgtata 18887349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 5934639 - 5934674
Alignment:
Q  84 tatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||||||| |||||    
T  5934639 tatgaaattttgattttgattaaaattataagtata 5934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 1284198 - 1284152
Alignment:
Q  171 tttttgaatgacactaacaatataacattcttacaggaaaatttgtt 217  Q
    |||||||||||||||||||| |||||||||||| ||  |||||||||    
T  1284198 tttttgaatgacactaacaaaataacattcttatagtgaaatttgtt 1284152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 41372692 - 41372662
Alignment:
Q  89 aattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||||||||    
T  41372692 aattttgattttgattaaaattataggtata 41372662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 415357 - 415328
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  415357 tatgaaattttgattttgattaaaattata 415328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 1658088 - 1658059
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  1658088 tatgaaattttgattttgattaaaattata 1658059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 6336035 - 6336006
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  6336035 tatgaaattttgattttgattaaaattata 6336006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 14031644 - 14031673
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  14031644 tatgaaattttgattttgattaaaattata 14031673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 112
Target Start/End: Original strand, 29283845 - 29283874
Alignment:
Q  83 ttatgaaattttgattttgattaaaattat 112  Q
    ||||||||||||||||||||||||||||||    
T  29283845 ttatgaaattttgattttgattaaaattat 29283874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 36802056 - 36802027
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  36802056 tatgaaattttgattttgattaaaattata 36802027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 37402089 - 37402118
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  37402089 tatgaaattttgattttgattaaaattata 37402118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 45521660 - 45521631
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  45521660 attttgattttgattaaaattataggtata 45521631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 444580 - 444552
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  444580 ttatgaaattttgattttgattaaaatta 444552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 2293040 - 2293004
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  2293040 ttatgaaatttagattttgattaaaattatatgtata 2293004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 6235372 - 6235408
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  6235372 ttataaaattttgattttgattaaaattatagatata 6235408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 15898954 - 15898926
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  15898954 ttatgaaattttgattttgattaaaatta 15898926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 41368328 - 41368360
Alignment:
Q  83 ttatgaaattttgattttgattaaaattatagg 115  Q
    |||||||||||||||||||| ||||||||||||    
T  41368328 ttatgaaattttgattttgactaaaattatagg 41368360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 45440845 - 45440817
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  45440845 ttatgaaattttgattttgattaaaatta 45440817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 16418081 - 16418049
Alignment:
Q  83 ttatgaaattttgattttgattaaaattatagg 115  Q
    |||||||||||||||||||||||||||||||||    
T  16418081 ttatgaaattttgattttgattaaaattatagg 16418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 25704327 - 25704363
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||| ||||||||||||||||||||||||||||||||    
T  25704327 ttataaaattttgattttgattaaaattataggtata 25704363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 40368197 - 40368161
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||| ||||||||||    
T  40368197 ttatgaaattttgattttgattaaaagtataggtata 40368161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 119
Target Start/End: Complemental strand, 21968060 - 21968025
Alignment:
Q  84 tatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||||||| |||||    
T  21968060 tatgaaattttgattttgattaaaattataagtata 21968025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 10390537 - 10390495
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtatatatttt 125  Q
    |||||||||||| |||||||||||||||| |||| ||||||||    
T  10390537 ttatgaaattttaattttgattaaaattagaggtttatatttt 10390495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 41103621 - 41103591
Alignment:
Q  89 aattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||||||||    
T  41103621 aattttgattttgattaaaattataggtata 41103591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 8028568 - 8028597
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  8028568 tatgaaattttgattttgattaaaattata 8028597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 10164179 - 10164208
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  10164179 tatgaaattttgattttgattaaaattata 10164208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 18314195 - 18314166
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  18314195 tatgaaattttgattttgattaaaattata 18314166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 42470307 - 42470356
Alignment:
Q  83 ttatgaaattttgattttgattaaaattatagg-tatatattttgcactt 131  Q
    |||||||||||||||||||||||||| |||||| || ||||||| |||||    
T  42470307 ttatgaaattttgattttgattaaaaatataggataaatattttacactt 42470356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 47401906 - 47401877
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  47401906 attttgattttgattaaaattataggtata 47401877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 1146667 - 1146612
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtatatattttgcacttacatatta 139  Q
    |||| ||||||||||||||| ||||| |||| ||||||||||||||||  |||||||    
T  1146667 ttataaaattttgattttgaataaaa-tatatgtatatattttgcactatcatatta 1146612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 9306423 - 9306395
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  9306423 ttatgaaattttgattttgattaaaatta 9306395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 31467136 - 31467104
Alignment:
Q  90 attttgattttgattaaaattataggtatatat 122  Q
    |||||||||||||||||||||||||||| ||||    
T  31467136 attttgattttgattaaaattataggtaaatat 31467104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 37705716 - 37705744
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  37705716 ttatgaaattttgattttgattaaaatta 37705744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 119
Target Start/End: Complemental strand, 36196638 - 36196603
Alignment:
Q  84 tatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||||||||||||||| |||||    
T  36196638 tatgaaattttgattttgattaaaattatatgtata 36196603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 118
Target Start/End: Complemental strand, 47683608 - 47683578
Alignment:
Q  88 aaattttgattttgattaaaattataggtat 118  Q
    |||||||||||||||||||||||||||||||    
T  47683608 aaattttgattttgattaaaattataggtat 47683578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 22160536 - 22160507
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  22160536 tatgaaattttgattttgattaaaattata 22160507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 23316085 - 23316056
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  23316085 tatgaaattttgattttgattaaaattata 23316056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 25921161 - 25921132
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  25921161 tatgaaattttgattttgattaaaattata 25921132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 31106446 - 31106475
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  31106446 tatgaaattttgattttgattaaaattata 31106475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 36825459 - 36825430
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  36825459 tatgaaattttgattttgattaaaattata 36825430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 47806416 - 47806445
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  47806416 attttgattttgattaaaattataggtata 47806445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 594449 - 594477
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  594449 ttatgaaattttgattttgattaaaatta 594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 628016 - 627988
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  628016 ttatgaaattttgattttgattaaaatta 627988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 12214449 - 12214477
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  12214449 ttatgaaattttgattttgattaaaatta 12214477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 21053984 - 21054012
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  21053984 ttatgaaattttgattttgattaaaatta 21054012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 28510046 - 28510014
Alignment:
Q  90 attttgattttgattaaaattataggtatatat 122  Q
    |||||||||| ||||||||||||||||||||||    
T  28510046 attttgatttagattaaaattataggtatatat 28510014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 28703936 - 28703991
Alignment:
Q  85 atgaaattttgattttgattaaaattataggtat--atattttgcacttacatatt 138  Q
    |||||||||||||||||||||||| |||| ||||  |||||||||| || ||||||    
T  28703936 atgaaattttgattttgattaaaaatatatgtatagatattttgcattttcatatt 28703991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 28715310 - 28715342
Alignment:
Q  85 atgaaattttgattttgattaaaattataggta 117  Q
    |||||||||||||||||||||||| ||||||||    
T  28715310 atgaaattttgattttgattaaaaatataggta 28715342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 39670347 - 39670319
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  39670347 ttatgaaattttgattttgattaaaatta 39670319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 47045047 - 47045075
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  47045047 ttatgaaattttgattttgattaaaatta 47045075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 47393592 - 47393540
Alignment:
Q  171 tttttgaatgacactaacaatataacattcttacaggaaaatttgttaaaaga 223  Q
    |||||||||||||| |||||||||||||| ||| | |||| |||||| |||||    
T  47393592 tttttgaatgacaccaacaatataacatttttataagaaattttgtttaaaga 47393540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 48458606 - 48458570
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  48458606 ttataaaattttgattttaattaaaattataggtata 48458570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 54857723 - 54857695
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  54857723 ttatgaaattttgattttgattaaaatta 54857695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000006; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 51103231 - 51103274
Alignment:
Q  174 ttgaatgacactaacaatataacattcttacaggaaaatttgtt 217  Q
    |||||||||||||||||||||||||||||| | | |||||||||    
T  51103231 ttgaatgacactaacaatataacattcttatatgcaaatttgtt 51103274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 113
Target Start/End: Original strand, 36640459 - 36640489
Alignment:
Q  83 ttatgaaattttgattttgattaaaattata 113  Q
    |||||||||||||||||||||||||||||||    
T  36640459 ttatgaaattttgattttgattaaaattata 36640489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 113
Target Start/End: Complemental strand, 38358838 - 38358808
Alignment:
Q  83 ttatgaaattttgattttgattaaaattata 113  Q
    |||||||||||||||||||||||||||||||    
T  38358838 ttatgaaattttgattttgattaaaattata 38358808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 3806846 - 3806817
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  3806846 tatgaaattttgattttgattaaaattata 3806817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 21301658 - 21301687
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  21301658 tatgaaattttgattttgattaaaattata 21301687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 25441368 - 25441397
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  25441368 tatgaaattttgattttgattaaaattata 25441397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 33706520 - 33706549
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  33706520 tatgaaattttgattttgattaaaattata 33706549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 35963952 - 35963904
Alignment:
Q  85 atgaaattttgattttgattaaaattataggtat--atattttgcactt 131  Q
    |||||||||||||||||||||| ||||||| |||  |||||||||||||    
T  35963952 atgaaattttgattttgattaatattatagctatagatattttgcactt 35963904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 36174415 - 36174386
Alignment:
Q  82 cttatgaaattttgattttgattaaaatta 111  Q
    ||||||||||||||||||||||||||||||    
T  36174415 cttatgaaattttgattttgattaaaatta 36174386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 37980475 - 37980446
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  37980475 tatgaaattttgattttgattaaaattata 37980446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 39199037 - 39199066
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  39199037 attttgattttgattaaaattataggtata 39199066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 44176898 - 44176927
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  44176898 tatgaaattttgattttgattaaaattata 44176927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 44183580 - 44183609
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  44183580 tatgaaattttgattttgattaaaattata 44183609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 47411219 - 47411190
Alignment:
Q  90 attttgattttgattaaaattataggtata 119  Q
    ||||||||||||||||||||||||||||||    
T  47411219 attttgattttgattaaaattataggtata 47411190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 51924327 - 51924356
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  51924327 tatgaaattttgattttgattaaaattata 51924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 1148934 - 1148891
Alignment:
Q  90 attttgattttgattaaaattataggtat--atattttgcactt 131  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  1148934 attttgattttgattaaaattataagtatagatattttgcactt 1148891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 28391475 - 28391447
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  28391475 ttatgaaattttgattttgattaaaatta 28391447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 35258790 - 35258826
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||||||||| |||||||||||| |||||    
T  35258790 ttatgaaattttgatttttattaaaattatatgtata 35258826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 42522105 - 42522065
Alignment:
Q  84 tatgaaattttgattttgattaaaattataggtatatattt 124  Q
    ||||||||||||||||| |||||||||||| ||| ||||||    
T  42522105 tatgaaattttgatttttattaaaattatatgtagatattt 42522065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 47415876 - 47415912
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  47415876 ttatgaaattttaattttgattaaaattatagatata 47415912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 82005 - 81976
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  82005 tatgaaattttgattttgattaaaattata 81976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.00000009; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 31383608 - 31383579
Alignment:
Q  84 tatgaaattttgattttgattaaaattata 113  Q
    ||||||||||||||||||||||||||||||    
T  31383608 tatgaaattttgattttgattaaaattata 31383579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 4577915 - 4577951
Alignment:
Q  83 ttatgaaattttgattttgattaaaattataggtata 119  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  4577915 ttatgaaattttaattttgattaaaattatagatata 4577951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 6875007 - 6875035
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  6875007 ttatgaaattttgattttgattaaaatta 6875035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 31203919 - 31203947
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  31203919 ttatgaaattttgattttgattaaaatta 31203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 34209942 - 34209970
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  34209942 ttatgaaattttgattttgattaaaatta 34209970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 1545 - 1573
Alignment:
Q  83 ttatgaaattttgattttgattaaaatta 111  Q
    |||||||||||||||||||||||||||||    
T  1545 ttatgaaattttgattttgattaaaatta 1573  T

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