View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5947-Insertion-4 (Length: 395)
Name: NF5947-Insertion-4
Description: NF5947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5947-Insertion-4 |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 9 - 388
Target Start/End: Complemental strand, 45781857 - 45781479
Alignment:
| Q |
9 |
ggtataatgcatcgtacattgaatgatgttaaggttactcttttatatgcatcgatgttgggttccatggagttatggacgtataatcgttgcaaagtgg |
108 |
Q |
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| T |
45781857 |
ggtataatgcatcgtacattgaatgatgttaaggttactcttttatatgcatcgatgttgggttccatggagttatggacgtata-tcgttgcaaagtgg |
45781759 |
T |
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| Q |
109 |
ttacagacggcgaggtcttgtaacctttggtcgttgctccttatgacggcacaaagcattacaaaaacaaagggtgtataaacgtcaatggggctcaaag |
208 |
Q |
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| T |
45781758 |
ttacagacggcgaggtcttgtaacctttggtcgttgctccttatgacggtacaaagcattacaaaaacaaagggtgtataaacatcaatggggctcaaag |
45781659 |
T |
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| Q |
209 |
atgtgcttaattaggccttcctcttttgtgttcggcttatgttcgatatgaggttgacgaggacatcatgttgggacaatccaaaatagttgcaccccca |
308 |
Q |
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| T |
45781658 |
atgtgcttaattaggccttcctcttttgtgtttggcttatgttcgatatgaggttgacgaggacatcatgttgggacaatccaaaatagttgcaccccca |
45781559 |
T |
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| Q |
309 |
cctcaagtcataagtcttgtaacatcttgaagataacgttgactacaacttggaatcgagtgttaatcgtttgatcttgt |
388 |
Q |
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| T |
45781558 |
cctcaagtcataagtcttgtaacatcttgaagataacgttgactacaacttggaatcgagtgttaatcgtttgatcttgt |
45781479 |
T |
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