View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5947-Insertion-6 (Length: 210)

Name: NF5947-Insertion-6
Description: NF5947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5947-Insertion-6
NF5947-Insertion-6
[»] chr8 (28 HSPs)
chr8 (37-210)||(6311261-6311436)
chr8 (52-191)||(7289892-7290032)
chr8 (37-210)||(33037764-33037939)
chr8 (57-210)||(25328225-25328379)
chr8 (37-210)||(36979341-36979517)
chr8 (37-158)||(18853177-18853301)
chr8 (37-210)||(18870518-18870695)
chr8 (37-167)||(4760075-4760208)
chr8 (37-167)||(10689143-10689276)
chr8 (37-210)||(30655606-30655786)
chr8 (57-191)||(39784789-39784924)
chr8 (39-154)||(26287866-26287985)
chr8 (39-154)||(26301123-26301242)
chr8 (39-154)||(26313117-26313236)
chr8 (74-196)||(10684224-10684348)
chr8 (37-167)||(1261954-1262088)
chr8 (74-191)||(35745392-35745511)
chr8 (39-167)||(31071229-31071362)
chr8 (74-157)||(26403240-26403327)
chr8 (74-155)||(4456028-4456113)
chr8 (74-157)||(23799587-23799674)
chr8 (77-155)||(7412344-7412426)
chr8 (74-155)||(19175766-19175851)
chr8 (74-154)||(4696609-4696693)
chr8 (77-157)||(6127224-6127308)
chr8 (76-135)||(9765852-9765914)
chr8 (74-154)||(19752407-19752491)
chr8 (74-157)||(5702493-5702580)
[»] chr5 (34 HSPs)
chr5 (37-210)||(31180178-31180353)
chr5 (37-210)||(1457108-1457283)
chr5 (37-210)||(15044649-15044824)
chr5 (52-210)||(43592258-43592418)
chr5 (52-210)||(27449793-27449953)
chr5 (37-191)||(30631370-30631526)
chr5 (52-210)||(27444949-27445109)
chr5 (52-210)||(43598703-43598863)
chr5 (52-210)||(43604195-43604355)
chr5 (52-210)||(43609687-43609847)
chr5 (37-167)||(38192136-38192270)
chr5 (37-167)||(38219361-38219495)
chr5 (57-191)||(37556588-37556724)
chr5 (57-191)||(37561410-37561546)
chr5 (57-191)||(28807540-28807674)
chr5 (74-196)||(31396953-31397077)
chr5 (41-167)||(35387629-35387759)
chr5 (74-196)||(31401810-31401934)
chr5 (37-167)||(24135810-24135945)
chr5 (74-157)||(2785376-2785461)
chr5 (74-191)||(33768180-33768299)
chr5 (74-191)||(33791317-33791436)
chr5 (74-155)||(9353344-9353429)
chr5 (74-155)||(36932362-36932447)
chr5 (74-157)||(10281751-10281838)
chr5 (74-155)||(15464532-15464617)
chr5 (74-157)||(19588746-19588833)
chr5 (75-157)||(11916982-11917068)
chr5 (74-155)||(14520230-14520315)
chr5 (74-157)||(3880299-3880386)
chr5 (74-157)||(17003970-17004057)
chr5 (77-155)||(12084187-12084269)
chr5 (74-154)||(28832259-28832343)
chr5 (74-154)||(42127423-42127507)
[»] chr3 (46 HSPs)
chr3 (43-210)||(28503821-28503991)
chr3 (52-210)||(22173141-22173301)
chr3 (37-210)||(7167208-7167384)
chr3 (37-167)||(2671586-2671719)
chr3 (37-167)||(8739063-8739196)
chr3 (37-167)||(9091301-9091434)
chr3 (37-167)||(40372795-40372928)
chr3 (37-167)||(8477325-8477459)
chr3 (74-191)||(18656436-18656553)
chr3 (59-196)||(8512202-8512342)
chr3 (59-196)||(8517082-8517222)
chr3 (39-167)||(1305914-1306045)
chr3 (74-196)||(2672891-2673015)
chr3 (74-196)||(2677047-2677171)
chr3 (115-210)||(28501654-28501750)
chr3 (74-196)||(32475486-32475608)
chr3 (74-196)||(32480344-32480466)
chr3 (40-167)||(26928591-26928721)
chr3 (40-167)||(32143287-32143418)
chr3 (74-191)||(24968108-24968227)
chr3 (40-154)||(27986449-27986567)
chr3 (74-155)||(8370488-8370573)
chr3 (74-155)||(27974954-27975039)
chr3 (40-167)||(27452924-27453055)
chr3 (74-157)||(18552883-18552970)
chr3 (75-157)||(36029094-36029180)
chr3 (74-155)||(16264350-16264435)
chr3 (74-155)||(21711223-21711308)
chr3 (77-157)||(1736305-1736389)
chr3 (74-154)||(33386669-33386753)
chr3 (74-157)||(3716002-3716089)
chr3 (74-157)||(30709790-30709877)
chr3 (74-157)||(40592782-40592869)
chr3 (74-120)||(10207935-10207981)
chr3 (39-98)||(1309819-1309878)
chr3 (74-157)||(48438214-48438301)
chr3 (74-155)||(6794715-6794800)
chr3 (74-157)||(40844652-40844738)
chr3 (74-154)||(1417493-1417577)
chr3 (74-154)||(39039995-39040079)
chr3 (74-157)||(25795781-25795868)
chr3 (74-157)||(26298988-26299075)
chr3 (74-157)||(47923906-47923993)
chr3 (74-154)||(3328359-3328443)
chr3 (74-154)||(37466291-37466375)
chr3 (74-157)||(24695164-24695251)
[»] scaffold0355 (1 HSPs)
scaffold0355 (37-191)||(9609-9763)
[»] chr6 (26 HSPs)
chr6 (52-210)||(22010643-22010803)
chr6 (52-210)||(14737523-14737682)
chr6 (52-210)||(28184484-28184643)
chr6 (63-210)||(11856964-11857113)
chr6 (52-210)||(14742383-14742542)
chr6 (57-191)||(28155536-28155671)
chr6 (37-167)||(5674770-5674904)
chr6 (57-191)||(6438484-6438619)
chr6 (74-196)||(33330405-33330529)
chr6 (74-196)||(33335902-33336026)
chr6 (74-191)||(6005418-6005537)
chr6 (74-191)||(16838745-16838864)
chr6 (74-155)||(5757490-5757575)
chr6 (74-152)||(21356036-21356118)
chr6 (74-155)||(31086485-31086570)
chr6 (74-157)||(5572251-5572338)
chr6 (40-154)||(22708984-22709102)
chr6 (74-156)||(4629954-4630040)
chr6 (74-156)||(10077176-10077262)
chr6 (74-157)||(22963700-22963786)
chr6 (74-157)||(23824607-23824693)
chr6 (74-111)||(5343482-5343519)
chr6 (74-157)||(31979513-31979600)
chr6 (74-154)||(5017482-5017566)
chr6 (74-135)||(31936587-31936651)
chr6 (86-157)||(21801354-21801429)
[»] chr2 (31 HSPs)
chr2 (52-210)||(44312570-44312730)
chr2 (52-210)||(39811935-39812094)
chr2 (37-210)||(11098884-11099060)
chr2 (37-167)||(14291452-14291585)
chr2 (37-207)||(32246747-32246923)
chr2 (37-167)||(9296401-9296534)
chr2 (37-167)||(25398458-25398592)
chr2 (39-167)||(3491716-3491847)
chr2 (37-167)||(25403596-25403730)
chr2 (57-191)||(19344404-19344541)
chr2 (57-191)||(19349262-19349399)
chr2 (40-154)||(40738810-40738926)
chr2 (74-157)||(21629944-21630030)
chr2 (74-157)||(8040060-8040147)
chr2 (77-157)||(13569331-13569415)
chr2 (74-155)||(28259189-28259274)
chr2 (74-158)||(20522220-20522308)
chr2 (74-157)||(10445454-10445541)
chr2 (74-157)||(17865203-17865290)
chr2 (74-157)||(34682344-34682431)
chr2 (75-157)||(34388859-34388945)
chr2 (74-157)||(14699018-14699104)
chr2 (112-167)||(25407663-25407719)
chr2 (74-157)||(31056044-31056131)
chr2 (74-157)||(33528631-33528718)
chr2 (75-157)||(10707262-10707348)
chr2 (77-157)||(8390160-8390244)
chr2 (74-152)||(42039684-42039766)
chr2 (74-157)||(16940219-16940306)
chr2 (74-157)||(17010884-17010971)
chr2 (74-157)||(39482931-39483018)
[»] chr4 (29 HSPs)
chr4 (52-210)||(51520436-51520596)
chr4 (37-191)||(3813987-3814142)
chr4 (52-191)||(9224373-9224513)
chr4 (37-210)||(24741904-24742080)
chr4 (57-210)||(45357243-45357397)
chr4 (52-191)||(9229160-9229300)
chr4 (37-167)||(29760605-29760738)
chr4 (52-191)||(56146677-56146817)
chr4 (57-210)||(45347763-45347918)
chr4 (74-191)||(5732666-5732783)
chr4 (57-191)||(18855710-18855845)
chr4 (39-154)||(28468542-28468660)
chr4 (40-167)||(31985634-31985764)
chr4 (74-157)||(10047379-10047466)
chr4 (74-157)||(16623303-16623390)
chr4 (74-157)||(39245994-39246081)
chr4 (74-155)||(5396683-5396768)
chr4 (74-155)||(36315241-36315326)
chr4 (74-155)||(36329450-36329535)
chr4 (74-157)||(38152449-38152536)
chr4 (79-157)||(6743425-6743507)
chr4 (75-156)||(5143260-5143345)
chr4 (74-154)||(5269204-5269288)
chr4 (74-157)||(3796529-3796616)
chr4 (75-156)||(5147678-5147763)
chr4 (75-155)||(3777550-3777634)
chr4 (78-157)||(16630690-16630773)
chr4 (74-157)||(24333809-24333896)
chr4 (74-156)||(54867184-54867269)
[»] chr1 (27 HSPs)
chr1 (53-210)||(41398216-41398374)
chr1 (37-210)||(24787321-24787498)
chr1 (53-210)||(41390561-41390719)
chr1 (57-191)||(25445055-25445191)
chr1 (37-167)||(24202769-24202903)
chr1 (57-191)||(39445483-39445618)
chr1 (57-191)||(1054978-1055113)
chr1 (57-191)||(44023840-44023975)
chr1 (57-196)||(43988424-43988566)
chr1 (39-167)||(19358843-19358975)
chr1 (39-167)||(19361432-19361564)
chr1 (39-167)||(19380072-19380204)
chr1 (74-157)||(47703946-47704033)
chr1 (74-155)||(26644909-26644994)
chr1 (74-157)||(9476261-9476348)
chr1 (74-157)||(19072928-19073015)
chr1 (74-157)||(19120818-19120905)
chr1 (74-157)||(13598398-13598485)
chr1 (74-157)||(16124526-16124613)
chr1 (74-157)||(27104382-27104469)
chr1 (74-157)||(29651811-29651898)
chr1 (74-155)||(3281708-3281793)
chr1 (74-155)||(37069770-37069855)
chr1 (74-157)||(775672-775759)
chr1 (74-154)||(47098837-47098921)
chr1 (74-155)||(13604635-13604720)
chr1 (74-155)||(21536581-21536666)
[»] scaffold0135 (1 HSPs)
scaffold0135 (52-191)||(35028-35168)
[»] chr7 (34 HSPs)
chr7 (52-210)||(12406310-12406470)
chr7 (37-210)||(20357504-20357681)
chr7 (37-210)||(31109530-31109706)
chr7 (52-160)||(4866709-4866819)
chr7 (55-210)||(12396893-12397050)
chr7 (37-210)||(24024273-24024450)
chr7 (57-191)||(19992296-19992432)
chr7 (37-167)||(2057928-2058062)
chr7 (37-167)||(21639771-21639905)
chr7 (37-167)||(1533444-1533578)
chr7 (37-167)||(18408727-18408860)
chr7 (39-167)||(18413606-18413736)
chr7 (37-167)||(21645969-21646103)
chr7 (74-196)||(24261283-24261407)
chr7 (74-196)||(24266162-24266286)
chr7 (74-196)||(16880074-16880197)
chr7 (74-196)||(16884930-16885053)
chr7 (57-166)||(21812229-21812340)
chr7 (74-157)||(29159803-29159890)
chr7 (75-156)||(21983285-21983370)
chr7 (74-157)||(46516320-46516407)
chr7 (74-157)||(49091661-49091748)
chr7 (74-151)||(47263678-47263757)
chr7 (74-157)||(55948-56034)
chr7 (75-156)||(21988909-21988992)
chr7 (74-155)||(44848696-44848781)
chr7 (74-154)||(9190021-9190105)
chr7 (74-154)||(20284089-20284173)
chr7 (74-155)||(2479337-2479421)
chr7 (74-157)||(2647706-2647793)
chr7 (74-157)||(33332460-33332547)
chr7 (74-154)||(2580390-2580474)
chr7 (74-155)||(35960816-35960901)
chr7 (74-154)||(9185178-9185262)
[»] scaffold0188 (2 HSPs)
scaffold0188 (37-167)||(17952-18086)
scaffold0188 (37-167)||(24045-24179)
[»] scaffold0464 (1 HSPs)
scaffold0464 (57-191)||(346-481)
[»] scaffold0197 (2 HSPs)
scaffold0197 (74-196)||(14269-14393)
scaffold0197 (74-196)||(19125-19249)
[»] scaffold0259 (1 HSPs)
scaffold0259 (74-196)||(2211-2335)
[»] scaffold0028 (1 HSPs)
scaffold0028 (74-196)||(148916-149040)
[»] scaffold0009 (1 HSPs)
scaffold0009 (74-140)||(181980-182048)
[»] scaffold0978 (1 HSPs)
scaffold0978 (37-106)||(300-369)
[»] scaffold0140 (1 HSPs)
scaffold0140 (74-155)||(8431-8516)
[»] scaffold0036 (1 HSPs)
scaffold0036 (75-155)||(85684-85768)
[»] scaffold0006 (3 HSPs)
scaffold0006 (74-157)||(5683-5770)
scaffold0006 (74-157)||(2492-2579)
scaffold0006 (74-155)||(133292-133377)
[»] scaffold0087 (2 HSPs)
scaffold0087 (74-155)||(43973-44058)
scaffold0087 (74-155)||(36844-36929)
[»] scaffold0148 (1 HSPs)
scaffold0148 (74-157)||(10729-10816)
[»] scaffold0098 (1 HSPs)
scaffold0098 (74-154)||(45253-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (77-157)||(17266-17350)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 4e-74; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 6311261 - 6311436
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatcc 134  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  6311261 aacaagataagcaagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 6311360  T
Q  135 aatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaagacagaccctagattcta 210  Q
    |||||||||||||||||||||||||| |||||| |||||||  ||||||||||||||||||| |||||||||||||    
T  6311361 aatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagacaaaccctagattcta 6311436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 7290032 - 7289892
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  7290032 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 7289933  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    ||||||||||| |||||| |||||||  ||||||||||||||    
T  7289932 tacaaaaggttacaagaa-ctctagccttcaagctttacaca 7289892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 33037939 - 33037764
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  33037939 aacaagataagcaagaaaagaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 33037840  T
Q  135 aatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||||||||||||| |||| |||||| |  ||||  |||||| ||||||||| ||| |||||||||||||    
T  33037839 aatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattcta 33037764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 25328379 - 25328225
Alignment:
Q  57 aagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaa 154  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  25328379 aagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaa 25328280  T
Q  155 aaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||| |||||  |||||||  |||||||||||||| | ||| |||||||||||||    
T  25328279 aaggttacaaga--ctctagccttcaagctttacacatgaacaaaccctagattcta 25328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 36979341 - 36979517
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  36979341 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 36979440  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||| |||||||||||||| |||| |||||| |  ||||  |||||| ||||||||| ||| |||||||||||||    
T  36979441 aatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattcta 36979517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 158
Target Start/End: Complemental strand, 18853301 - 18853177
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  18853301 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 18853202  T
Q  135 aatatga-gaaagtgttacaaaagg 158  Q
    ||||| | |||||||||||||||||    
T  18853201 aatataatgaaagtgttacaaaagg 18853177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 18870695 - 18870518
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  18870695 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcatccaatatggcctaatctgggggagagagcagctctccaatcc 18870596  T
Q  135 aatatga-gaaagtgttacaaaa-ggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||| | ||||||||||||||| |||| |||||| |  ||||  |||||| ||||||||| ||| |||||||||||||    
T  18870595 aatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagc-ttacacaagaacaaaccctagattcta 18870518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 4760208 - 4760075
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  4760208 aacaagataagcaagaaaggaagaacaaaacatcaagaagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatcc 4760109  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  4760108 aatatgatgaaagtgttacaaagggttacaagaa 4760075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 10689276 - 10689143
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  10689276 aacaagataagtaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 10689177  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||| | |||| ||||||    
T  10689176 aatatgatgaaagtgttacagagggttacaagaa 10689143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 30655606 - 30655786
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaa----cactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctcca 130  Q
    ||||||||||||||||||||||||||||||    |||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  30655606 aacaagataagcaagaaaggaagaacaaaaaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcca 30655705  T
Q  131 atccaatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||| ||||||| |||||||||||||| |||| |||||| |  ||||  |||||| ||||||||| ||| |||||||||||||    
T  30655706 atctaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattcta 30655786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 39784924 - 39784789
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  39784924 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttaca 39784826  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| ||||||||||||||||    
T  39784825 aaaggttacaaga--ctctagcttatcaagctttacaca 39784789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 26287866 - 26287985
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcca 135  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  26287866 caagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcca 26287965  T
Q  136 atatga-gaaagtgttacaa 154  Q
     ||||| |||||||||||||    
T  26287966 ctatgatgaaagtgttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 26301123 - 26301242
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcca 135  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  26301123 caagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcca 26301222  T
Q  136 atatga-gaaagtgttacaa 154  Q
     ||||| |||||||||||||    
T  26301223 ctatgatgaaagtgttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 26313117 - 26313236
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcca 135  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  26313117 caagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcca 26313216  T
Q  136 atatga-gaaagtgttacaa 154  Q
     ||||| |||||||||||||    
T  26313217 ctatgatgaaagtgttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 10684348 - 10684224
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  10684348 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 10684251  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  10684250 ctagcttatcaagctttacacaagaca 10684224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 1262088 - 1261954
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    |||||||||||  |||||||||||||||| ||||  | |||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||    
T  1262088 aacaagataagatagaaaggaagaacaaacacaccaaaaagattgttgacccagttcaaccaatatgacctaatctgggggagagagcagctctccaatc 1261989  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  1261988 cactatgatgaaagtgttacaaagggttacaagaa 1261954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 35745392 - 35745511
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  35745392 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 35745489  T
Q  171 ctagc-tatcaagctttacaca 191  Q
    ||||| | ||||||||||||||    
T  35745490 ctagcttttcaagctttacaca 35745511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 31071362 - 31071229
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||||||| ||||| | |||||||| ||||||||  |||||||||||||||||||||||    
T  31071362 caagataagcaagaaaggaagaacaaacacaccaaaaagattgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctccaatcc 31071263  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    | ||||| |||||||||||||| |||| ||||||    
T  31071262 actatgatgaaagtgttacaaagggttacaagaa 31071229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 26403327 - 26403240
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  26403327 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 4456028 - 4456113
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||| |||||| |||| | ||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  4456028 aagattgctgacccggttcggtccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 4456113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 23799674 - 23799587
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||| |||  ||||||||||| |||||||||| ||||| ||||||||||||||||    
T  23799674 aagattgttgacccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaag 23799587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 7412344 - 7412426
Alignment:
Q  77 attgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  7412344 attgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 7412426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 19175851 - 19175766
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||| ||||| | |||||||| |||||||||||  |||||||| |||||||||||| ||||| ||||||||||||||    
T  19175851 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaa 19175766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 4696693 - 4696609
Alignment:
Q  74 aagattgttgacccagttc-agccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||| |||||||    
T  4696693 aagattgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagagttacaa 4696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 6127224 - 6127308
Alignment:
Q  77 attgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||| |||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  6127224 attgttgactcagttcggtccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaag 6127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 9765914 - 9765852
Alignment:
Q  76 gattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatcca 135  Q
    ||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||||||||    
T  9765914 gattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 9765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 19752491 - 19752407
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||| ||||| | |||||||| |||| |||  |||||||||||||||||||||||| || || |||||||||||||    
T  19752491 aagattgttgacctagttcggtccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttacaa 19752407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 5702580 - 5702493
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||| |  ||||||||||| | |||||||||  ||||| ||||||||||||||||    
T  5702580 aagattgttgacccagttcggtccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaag 5702493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 1e-64; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 31180178 - 31180353
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatcc 134  Q
    ||||||||||| ||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  31180178 aacaagataagaaagaaagaaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 31180277  T
Q  135 aatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaagacagaccctagattcta 210  Q
    ||||||||||||||||||||| |||| |||||| |||||||  ||||||||||||||||||| |||||||||||||    
T  31180278 aatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacacaagacaaaccctagattcta 31180353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 1457283 - 1457108
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  1457283 aacaagataagaaagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatcc 1457184  T
Q  135 aatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||||||||||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  1457183 aatatgagaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 1457108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 15044649 - 15044824
Alignment:
Q  37 aacaagataagcaagaaa-ggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  15044649 aacaagataagcaagaaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatc 15044748  T
Q  134 caatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||| | ||| |||||||||||||    
T  15044749 caatatgagaaagtgttacaaaaggttacaaga--ctctagctttcaagctttacacatgaacaaaccctagattcta 15044824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 43592258 - 43592418
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  43592258 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 43592357  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  43592358 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 43592418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 27449793 - 27449953
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  27449793 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 27449892  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  27449893 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 27449953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 37 - 191
Target Start/End: Original strand, 30631370 - 30631526
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  30631370 aacaagataagtaagaaaggaagaacaaaacaccaagaagattgttgactcagttcagccaatgtggcctaatctgggggagagagcagctctccaatcc 30631469  T
Q  135 aatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    ||||||||||||||||||||| |||| |||||| |||||||  ||||||||||||||    
T  30631470 aatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacaca 30631526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 27444949 - 27445109
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  27444949 aaaggaagaacaaaacaccgagaagattgttgacccagttcaggcaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 27445048  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  27445049 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 27445109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 43598703 - 43598863
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  43598703 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 43598802  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  43598803 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 43598863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 43604195 - 43604355
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  43604195 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 43604294  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  43604295 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 43604355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 43609687 - 43609847
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  43609687 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 43609786  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  43609787 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 43609847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 38192136 - 38192270
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  38192136 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 38192235  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  38192236 cactatgatgaaagtgttacaaagggttacaagaa 38192270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 38219361 - 38219495
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  38219361 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 38219460  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  38219461 cactatgatgaaagtgttacaaagggttacaagaa 38219495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 37556724 - 37556588
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  37556724 aagaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttaca 37556625  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||| |  |||||| ||||||||||||||||    
T  37556624 aaaggttacaagta--tctagcttatcaagctttacaca 37556588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 37561546 - 37561410
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  37561546 aagaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttaca 37561447  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||| |  |||||| ||||||||||||||||    
T  37561446 aaaggttacaagta--tctagcttatcaagctttacaca 37561410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 28807674 - 28807540
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  28807674 aagaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttaca 28807576  T
Q  154 aaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    ||||||| ||||||  ||||||| ||||||||||||||    
T  28807575 aaaggttacaagaa--tctagctttcaagctttacaca 28807540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 31397077 - 31396953
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  31397077 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 31396980  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  31396979 ctagcttatcaagctttacacaagaca 31396953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 167
Target Start/End: Original strand, 35387629 - 35387759
Alignment:
Q  41 agataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaat 137  Q
    ||||||||||||||||||||||||| ||||  | ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  35387629 agataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccaattcagccaatatggcctaatctgggggagagagcagctctccaatctact 35387728  T
Q  138 atga-gaaagtgttacaaaaggttgcaagaa 167  Q
    |||| |||||||||||||| |||| ||||||    
T  35387729 atgatgaaagtgttacaaagggttacaagaa 35387759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 31401934 - 31401810
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  31401934 aagattgttgacccagttcagccaatgtggcctaatatgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 31401837  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  31401836 ctagcttatcaagctttacacaagaca 31401810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 24135810 - 24135945
Alignment:
Q  37 aacaagataagcaagaaa-ggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaat 132  Q
    |||||||||||| ||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  24135810 aacaagataagctagaaaaggaagaacaaacacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctatccaat 24135909  T
Q  133 ccaatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
     || || || |||||||||||||| |||| ||||||    
T  24135910 gcactaagatgaaagtgttacaaagggttacaagaa 24135945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 2785376 - 2785461
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag 157  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  2785376 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag 2785461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 33768180 - 33768299
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  33768180 aagattgttgacccagttcagccaatgtggcctaatctgggggggagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 33768277  T
Q  171 ctagc-tatcaagctttacaca 191  Q
    ||||| | ||||||||||||||    
T  33768278 ctagcttttcaagctttacaca 33768299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 33791317 - 33791436
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  33791317 aagattgttgacccagttcagccaatgtggcctaatctgggggaaagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 33791414  T
Q  171 ctagc-tatcaagctttacaca 191  Q
    ||||| | ||||||||||||||    
T  33791415 ctagcttttcaagctttacaca 33791436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 9353429 - 9353344
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  9353429 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 9353344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 36932447 - 36932362
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  36932447 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 36932362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 10281751 - 10281838
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||| |||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  10281751 aagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 10281838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 15464532 - 15464617
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | ||||||||  ||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  15464532 aagattgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 15464617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 19588746 - 19588833
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | ||||||||  |||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  19588746 aagattgttgacccagttcggtccaatatgaactaatcttagggagagagcagccctccaatccactatgatgaaagtgttacaaaag 19588833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 11917068 - 11916982
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  11917068 agattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaag 11916982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 14520230 - 14520315
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  14520230 aagattgttgacccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaa 14520315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 3880299 - 3880386
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||  |||||| | |||||||| ||||||||| |  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  3880299 aagattgttgattcagttctgtccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaag 3880386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 17004057 - 17003970
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||| ||||||| ||||| |||||| || ||||||    
T  17004057 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaag 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 12084269 - 12084187
Alignment:
Q  77 attgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||||||||||||| | ||| |||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  12084269 attgttgacccagttcggtccactatgacctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaa 12084187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 28832259 - 28832343
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    |||||||||||||| |||| | |||||||| |||||||||||  |||||||||| |||||||||| || || |||||||||||||    
T  28832259 aagattgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 28832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 42127507 - 42127423
Alignment:
Q  74 aagattgttgacccagttc-agccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | | |||||| ||||||||  ||||||||||||| | |||||||| || || |||||||||||||    
T  42127507 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccccccaatccactaagatgaaagtgttacaa 42127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 1e-61; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 43 - 210
Target Start/End: Complemental strand, 28503991 - 28503821
Alignment:
Q  43 ataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatg 140  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28503991 ataaacaagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggaagagagcagctctccaatccaatatg 28503892  T
Q  141 agaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||||||||||||| |||||| |||||||  |||||||||||||||| | | |||||||||||||    
T  28503891 agaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattcta 28503821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 52 - 210
Target Start/End: Complemental strand, 22173301 - 22173141
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  22173301 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 22173202  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  22173201 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 22173141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 7167208 - 7167384
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  7167208 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 7167307  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||| |||||||||||||| |||| |||||| |  ||||  |||||| ||||||||| ||| |||||||||||||    
T  7167308 aatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattcta 7167384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 2671719 - 2671586
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  2671719 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 2671620  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  2671619 aatatgatgaaagtgttacaaagggttacaagaa 2671586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 8739196 - 8739063
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8739196 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 8739097  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  8739096 aatatgatgaaagtgttacaaagggttacaagaa 8739063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 9091434 - 9091301
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9091434 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 9091335  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  9091334 aatatgatgaaagtgttacaaagggttacaagaa 9091301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 40372928 - 40372795
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  40372928 aacaagataagcaagataggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 40372829  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  40372828 aatatgatgaaagtgttacaaagggttacaagaa 40372795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 8477325 - 8477459
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  8477325 aacaagataagcaagaaagaaagaacaaacacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 8477424  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    |||||||| |||||||||||||| |||| ||||||    
T  8477425 caatatgatgaaagtgttacaaagggttacaagaa 8477459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 18656436 - 18656553
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctc 171  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||    
T  18656436 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctc 18656533  T
Q  172 tagctatcaagctttacaca 191  Q
    ||||  ||||||||||||||    
T  18656534 tagcattcaagctttacaca 18656553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 8512202 - 8512342
Alignment:
Q  59 gaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaa 155  Q
    ||||||||||| ||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  8512202 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaa 8512301  T
Q  156 ag-gttgcaagaagctctagc-tatcaagctttacacaagaca 196  Q
    || ||| ||||||  |||||| |||||||||||||||||||||    
T  8512302 agagttacaagaa--tctagcttatcaagctttacacaagaca 8512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 8517082 - 8517222
Alignment:
Q  59 gaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaa 155  Q
    ||||||||||| ||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  8517082 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaa 8517181  T
Q  156 ag-gttgcaagaagctctagc-tatcaagctttacacaagaca 196  Q
    || ||| ||||||  |||||| |||||||||||||||||||||    
T  8517182 agagttacaagaa--tctagcttatcaagctttacacaagaca 8517222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 1305914 - 1306045
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcca 135  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  1305914 caagataagcaagaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctaggggagatagcagctctccaatcca 1306012  T
Q  136 atatga-gaaagtgttacaaaaggttgcaagaa 167  Q
     || || |||||||||||||| |||| ||||||    
T  1306013 ctacgatgaaagtgttacaaagggttacaagaa 1306045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 2673015 - 2672891
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  2673015 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 2672918  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||| ||||    
T  2672917 ctagcttatcaagctttacacatgaca 2672891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 2677171 - 2677047
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  2677171 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 2677074  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||| ||||    
T  2677073 ctagcttatcaagctttacacatgaca 2677047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 28501750 - 28501654
Alignment:
Q  115 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||| | | |||||||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattcta 28501654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 32475486 - 32475608
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctc 171  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||    
T  32475486 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaa--tc 32475582  T
Q  172 tagc-tatcaagctttacacaagaca 196  Q
    |||| |||||||||||||||||||||    
T  32475583 tagcttatcaagctttacacaagaca 32475608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 32480344 - 32480466
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctc 171  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||    
T  32480344 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaa--tc 32480440  T
Q  172 tagc-tatcaagctttacacaagaca 196  Q
    |||| |||||||||||||||||||||    
T  32480441 tagcttatcaagctttacacaagaca 32480466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 26928721 - 26928591
Alignment:
Q  40 aagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaa 136  Q
    ||||||||| |||||| ||||||||| ||||  | ||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||     
T  26928721 aagataagctagaaagaaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctgggggagagagcaactctccaatccac 26928623  T
Q  137 tatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||| |||||||||||||| |||| ||||||    
T  26928622 tatgatgaaagtgttacaaagggttacaagaa 26928591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 32143287 - 32143418
Alignment:
Q  40 aagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatcca 135  Q
    |||||||||||||||||||||||||| ||||  | ||||||||||||| ||||| | |||||||| ||||||||  ||||||||||||||||||||||||    
T  32143287 aagataagcaagaaaggaagaacaaacacac-caaaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 32143385  T
Q  136 atatga-gaaagtgttacaaaaggttgcaagaa 167  Q
     ||||| |||||||||||||| |||| ||||||    
T  32143386 ctatgatgaaagtgttacaaagggttacaagaa 32143418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 24968108 - 24968227
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||| |||| |  ||||||||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  24968108 aagattgttgacccagttcagccaatgtggcttaattttggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 24968205  T
Q  171 ctagcta-tcaagctttacaca 191  Q
    ||||||| ||||||||||||||    
T  24968206 ctagctattcaagctttacaca 24968227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 27986567 - 27986449
Alignment:
Q  40 aagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatcca 135  Q
    |||||||||||||||| | ||||||| ||||  | ||||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||||||||    
T  27986567 aagataagcaagaaagaatgaacaaacacaccaa-aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 27986469  T
Q  136 atatga-gaaagtgttacaa 154  Q
     ||||| |||||||||||||    
T  27986468 ctatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 8370573 - 8370488
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  8370573 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 8370488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 27975039 - 27974954
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  27975039 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 27974954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 27452924 - 27453055
Alignment:
Q  40 aagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatcca 135  Q
    |||||||||||||||| | ||||||| ||||  | ||||||||||| ||||||| | |||||||| ||||||| |||  |||||||||||||||||||||    
T  27452924 aagataagcaagaaagaaggaacaaacacaccaa-aagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctccaatcca 27453022  T
Q  136 atatga-gaaagtgttacaaaaggttgcaagaa 167  Q
     ||||| |||||||||||||| |||| ||||||    
T  27453023 ctatgatgaaagtgttacaaagggttacaagaa 27453055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 18552970 - 18552883
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  18552970 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 18552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 36029094 - 36029180
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctgggagaga--gcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||||| | |||||||| ||||||||||| ||||  |||||||||||||||| ||||| ||||||||||||||||    
T  36029094 agattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaag 36029180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 16264350 - 16264435
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||| ||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  16264350 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 16264435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 21711223 - 21711308
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||||||| |||||| ||||| ||||||||||||||    
T  21711223 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaa 21711308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 1736389 - 1736305
Alignment:
Q  77 attgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  1736389 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 1736305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 33386753 - 33386669
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||| ||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||    
T  33386753 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 3716089 - 3716002
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgggagagag--cagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||  ||||||||||||| | ||||| ||||||||||||||||    
T  3716089 aagattgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaag 3716002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 30709877 - 30709790
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| |||| |||||||||||    
T  30709877 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaag 30709790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 40592869 - 40592782
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctg--ggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||  |||||||| |||||||||||| | ||||| ||||||||||||||||    
T  40592869 aagattgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaag 40592782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 10207935 - 10207981
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatctgggagagag 120  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||    
T  10207935 aagattgttgacccagttcagccaatgtggcctaatctgggggagag 10207981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 1309819 - 1309878
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaa 98  Q
    ||||||||||||||||||||||||||| ||||  | |||||||||||||||||||||||||    
T  1309819 caagataagcaagaaaggaagaacaaacacac-caaaagattgttgacccagttcagccaa 1309878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 48438214 - 48438301
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||| |||||| ||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  48438214 aagattattgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 48438301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 6794800 - 6794715
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||||||||||| |||  | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  6794800 aagattgttgacccggttaggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 6794715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 40844652 - 40844738
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||  |||||| | |||||||| ||||||||||| |||||||||| ||| |||||| ||||| ||||||||||||||||    
T  40844652 aagattgttgattcagttcggtccaatatgacctaatctggggagagagcagccctcaaatccactatgatgaaagtgttacaaaag 40844738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 1417577 - 1417493
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatg-agaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| | |||||||||| || | ||||||||||||||    
T  1417577 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatccctccaatccactaagaagaaagtgttacaa 1417493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 39040079 - 39039995
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||| ||||| | |||||||| |||||||||||  ||||| || |||||||||||| ||||| |||||||||||||    
T  39040079 aagattgttgacctagttcggtccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 25795781 - 25795868
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||| ||||| | |||||||| |||||||||||  ||||||||||||||||||| | || || ||||||||||| ||||    
T  25795781 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaag 25795868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 26298988 - 26299075
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| |  ||||||| | ||||||  ||||||||||||| |||||||| | ||||| ||||||||||||||||    
T  26298988 aagattgttgacccagttcggttcaatatgacataatctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaag 26299075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 47923993 - 47923906
Alignment:
Q  74 aagattgttgacccagttc-agccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||| || ||||| | ||||| ||||||| ||||||||    
T  47923993 aagattgttgacccagttcgatccaatatgacctaatctaggggagagagcagcccttcaatctactatgatgaaagtgctacaaaag 47923906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 3328443 - 3328359
Alignment:
Q  74 aagattgttgacccagttca-gccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||||  |||||||| ||||||||   |||||||||||| || ||||||| || || |||||||||||||    
T  3328443 aagattgttgacccagttcattccaatatgacctaatctagaggagagagcagcccttcaatccactaagatgaaagtgttacaa 3328359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 37466291 - 37466375
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    |||||||||||| |||||| | |||||||| ||||||||  ||||||||| ||| |||||||||| || || |||||||||||||    
T  37466291 aagattgttgacacagttcggtccaatatgacctaatctgggggagagagtagccctccaatccactaagatgaaagtgttacaa 37466375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 24695251 - 24695164
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||| ||||| | |||||||| ||||||||  ||||||||||| | ||| |||||  ||||| ||||||||||||||||    
T  24695251 aagattgttgacctagttcggtccaatatgacctaatctacgggagagagcaaccctctaatccgctatgatgaaagtgttacaaaag 24695164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 37 - 191
Target Start/End: Complemental strand, 9763 - 9609
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9763 aacaagataagcaagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 9664  T
Q  135 aatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    |||||||||||||||||||||||||| |||||  |||||||  ||||||||||||||    
T  9663 aatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacaca 9609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 52 - 210
Target Start/End: Complemental strand, 22010803 - 22010643
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  22010803 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 22010704  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  22010703 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 22010643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 52 - 210
Target Start/End: Complemental strand, 14737682 - 14737523
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  14737682 aaagaaagaacaaaacaccgagaagattgttgatccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 14737583  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||  |||||||  |||||||||||| | | ||| |||||||||||||    
T  14737582 tacaaaaggttacaaga--ctctagccttcaagctttacatatgaacaaaccctagattcta 14737523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 28184484 - 28184643
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  28184484 aaagaaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgagaaagtgt 28184583  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| ||| |  |||||||  |||||||||||||| | ||| |||||||||||||    
T  28184584 tacaaaaggttacaaca--ctctagccttcaagctttacacatgaacaaaccctagattcta 28184643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 11856964 - 11857113
Alignment:
Q  63 aaaacactgagaagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggtt 160  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  11856964 aaaacaccaagaagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtt 11857063  T
Q  161 gcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
     |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  11857064 acaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 11857113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 52 - 210
Target Start/End: Complemental strand, 14742542 - 14742383
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||||    
T  14742542 aaagaaagaacaaaacaccgagaagattgttgacccagttcagccaatatgacctaatttgggggagagagcagctctccaatccaatatgagaaagtgt 14742443  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||  |||||||  |||||||||||| | | ||| |||||||||||||    
T  14742442 tacaaaaggttacaaga--ctctagccttcaagctttacatatgaacaaaccctagattcta 14742383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 28155671 - 28155536
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  28155671 aagaacaaaacaccgaacaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttaca 28155572  T
Q  154 aaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    ||||||| ||||||  | ||||| ||||||||||||||    
T  28155571 aaaggttacaagaa--tttagctttcaagctttacaca 28155536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 5674904 - 5674770
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||| ||||||||||||| ||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  5674904 aacaatataagcaagaaagaaagaacaaacacaccaaagagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 5674805  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    |||||||| |||||||||||||| |||| ||||||    
T  5674804 caatatgatgaaagtgttacaaagggttacaagaa 5674770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 6438484 - 6438619
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  6438484 aagaacaaaacaccgagcaagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttaca 6438582  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| | ||||||||||||||    
T  6438583 aaaggttacaaga--ctctagcttgtcaagctttacaca 6438619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 33330529 - 33330405
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  33330529 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 33330432  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||| ||||    
T  33330431 ctagcttatcaagctttacacatgaca 33330405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 33336026 - 33335902
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  33336026 aagattgttgacccagttcagccaatgtgacctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 33335929  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||| ||||    
T  33335928 ctagcttatcaagctttacacatgaca 33335902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 6005418 - 6005537
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  6005418 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 6005515  T
Q  171 ctagc-tatcaagctttacaca 191  Q
    ||||| | ||||||||||||||    
T  6005516 ctagcttttcaagctttacaca 6005537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 16838745 - 16838864
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  16838745 aagattgttgacccagttcagccaatgtggcttaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 16838842  T
Q  171 ctagcta-tcaagctttacaca 191  Q
    ||||||| ||||||||||||||    
T  16838843 ctagctattcaagctttacaca 16838864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 5757575 - 5757490
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  5757575 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 5757490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 21356036 - 21356118
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttac 152  Q
    ||||||||||||||||||| | |||||||| ||||||||||  |||||||||||||||||||||| ||||| |||||||||||    
T  21356036 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttac 21356118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 31086570 - 31086485
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||||| ||||||||  |||||||  ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  31086570 aagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatccactatgatgaaagtgttacaaa 31086485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 5572338 - 5572251
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| | |||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  5572338 aagattgttgacccaattcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 5572251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 22708984 - 22709102
Alignment:
Q  40 aagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagc-caatatggcctaatctggg--agagagcagctctccaatcca 135  Q
    |||||||||||||||||||||||||| ||||  | || |||||||||| ||||| |  |||||||  ||||||||||  |||||||||||||||||||||    
T  22708984 aagataagcaagaaaggaagaacaaacacaccaaaaa-attgttgacctagttcggttcaatatgatctaatctgggggagagagcagctctccaatcca 22709082  T
Q  136 atatga-gaaagtgttacaa 154  Q
     ||||| |||||||||||||    
T  22709083 ctatgatgaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 4629954 - 4630040
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||| |||||||| |||||||| |||||||| ||  ||||||||||||||||||||| || || |||||||||||||||    
T  4629954 aagattgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaa 4630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 10077262 - 10077176
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    ||||||||||||||| ||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| |||||||||||||||    
T  10077262 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 10077176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 22963700 - 22963786
Alignment:
Q  74 aagattgttgacccagttcagc-caatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| |  ||||||| || |||||||| |||||||||| |||||||||| ||||| ||||||||||||||||    
T  22963700 aagattgttgacccagttcggtgcaatatgaccaaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 22963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 23824693 - 23824607
Alignment:
Q  74 aagattgttgacccagttcagc-caatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| |  ||||||| || |||||||| |||||||||| |||||||||| ||||| ||||||||||||||||    
T  23824693 aagattgttgacccagttcggtgcaatatgaccaaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 23824607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 5343482 - 5343519
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct 111  Q
    |||||||||||||||||||||||||| |||||||||||    
T  5343482 aagattgttgacccagttcagccaatgtggcctaatct 5343519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 31979513 - 31979600
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| | |||||||||  |||||||||| |||||||||| || || ||||||||| ||||||    
T  31979513 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaag 31979600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 5017566 - 5017482
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | | |||||| ||||||||  ||||||||||| | |||||||| | ||||| |||||||||||||    
T  5017566 aagattgttgacccagttcggtcaaatatgacctaatctaggggagagagcaaccctccaatctactatgatgaaagtgttacaa 5017482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 31936587 - 31936651
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgggaga--gagcagctctccaatcca 135  Q
    ||||||||||||| ||||| | |||||||| |||| |||||||||  ||||||||||||||||||    
T  31936587 aagattgttgacctagttcggtccaatatgacctagtctgggagagagagcagctctccaatcca 31936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 21801429 - 21801354
Alignment:
Q  86 ccagttcag-ccaatatggcctaatctgggagag--agcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||| |||||||| ||||||||||| |||  ||||||||||||||||| || ||  |||||||||||||||    
T  21801429 ccagttcagtccaatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaag 21801354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 3e-56; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 52 - 210
Target Start/End: Complemental strand, 44312730 - 44312570
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  44312730 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 44312631  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  44312630 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 44312570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 52 - 210
Target Start/End: Complemental strand, 39812094 - 39811935
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  39812094 aaagaaagaacaaaacaccgagaagattgttgaaccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 39811995  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||  |||||||  |||||||||||||| | ||| |||||||||||||    
T  39811994 tacaaaaggttacaaga--ctctagccttcaagctttacacatgaacaaaccctagattcta 39811935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 11099060 - 11098884
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11099060 aacaagataaggaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 11098961  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||| |||||||||||||| |||| |||||| |  |||||  ||||| ||||||||| ||| |||||||||||||    
T  11098960 aatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagc-ttacacaagaacaaaccctagattcta 11098884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 14291452 - 14291585
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  14291452 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 14291551  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  14291552 aatatgatgaaagtgttacaaagggttacaagaa 14291585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 37 - 207
Target Start/End: Original strand, 32246747 - 32246923
Alignment:
Q  37 aacaagataagcaagaaa----ggaagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctcc 129  Q
    ||||||||||||||||||    ||||||||||||||| ||  |||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||    
T  32246747 aacaagataagcaagaaaaaaaggaagaacaaaacaccgaacaagattgttgaccttgttcagccaatatggcctaatctgggggagagagcagctctcc 32246846  T
Q  130 aatccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagatt 207  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||| | ||| ||||||||||    
T  32246847 aatccaatatgagaaagtgttacaaaaggttacaaga--ctctagctttcaagctttacacatgaacaaaccctagatt 32246923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 9296534 - 9296401
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  9296534 aacaagaaaagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatcc 9296435  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  9296434 aatatgatgaaagtgttacaaagggttacaagaa 9296401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 25398458 - 25398592
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  25398458 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatgacctaatctgggggagagagcagctctccaatc 25398557  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  25398558 cactatgatgaaagtgttacaaagggttacaagaa 25398592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 3491716 - 3491847
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcca 135  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  3491716 caagataagcaagaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcca 3491814  T
Q  136 atatga-gaaagtgttacaaaaggttgcaagaa 167  Q
     ||||| |||||||||||||| |||| ||||||    
T  3491815 ctatgatgaaagtgttacaaagggttacaagaa 3491847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 25403596 - 25403730
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | |||||||||||| |||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  25403596 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgactcagttcagccaatatgacctaatctgggggagagagcagctctccaatc 25403695  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  25403696 cactatgatgaaagtgttacaaagggttacaagaa 25403730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 19344404 - 19344541
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||    
T  19344404 aagaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttaca 19344503  T
Q  154 aaag-gttgcaagaagctctagc-tatcaagctttacaca 191  Q
    |||| ||| ||||||  |||||| | ||||||||||||||    
T  19344504 aaagagttacaagaa--tctagcttttcaagctttacaca 19344541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 19349262 - 19349399
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||    
T  19349262 aagaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttaca 19349361  T
Q  154 aaag-gttgcaagaagctctagc-tatcaagctttacaca 191  Q
    |||| ||| ||||||  |||||| | ||||||||||||||    
T  19349362 aaagagttacaagaa--tctagcttttcaagctttacaca 19349399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 40738810 - 40738926
Alignment:
Q  40 aagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct-gggagagagcagctctccaatccaat 137  Q
    ||||||||| |||||||||||||||| ||||  | ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |    
T  40738810 aagataagctagaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctggggggagagcagctctccaatccact 40738908  T
Q  138 atga-gaaagtgttacaa 154  Q
    |||| |||||||||||||    
T  40738909 atgatgaaagtgttacaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 21629944 - 21630030
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  21629944 aagattgttgacccagttcagtccaatatgacctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 21630030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 8040060 - 8040147
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  8040060 aagattgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 13569331 - 13569415
Alignment:
Q  77 attgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  13569331 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 13569415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 28259274 - 28259189
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  28259274 aagattgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 28259189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 20522220 - 20522308
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaagg 158  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| | |||||||||| ||||| |||||||||||||||||    
T  20522220 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagg 20522308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 10445541 - 10445454
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||| ||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  10445541 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaag 10445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 17865203 - 17865290
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||||| | |||||| ||||||||  ||||||||||| | |||||||||| ||||| ||||||||||||||||    
T  17865203 aagattgttgacccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaag 17865290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 34682431 - 34682344
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| | |||||||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  34682431 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaag 34682344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 34388859 - 34388945
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||| ||| | |||||||| |||||||||||  |||||| |||||||||||||| ||||| ||||||||||||||||    
T  34388859 agattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaag 34388945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 14699104 - 14699018
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||| ||||||||||    
T  14699104 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaag 14699018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 25407663 - 25407719
Alignment:
Q  112 gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    
T  25407663 gggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 25407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 31056044 - 31056131
Alignment:
Q  74 aagattgttgacccagttcagc-caatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||| ||||| |  ||||||| ||||||||  |||||||||||||||||||||||| || || ||||||||||||||||    
T  31056044 aagattgttgacctagttcggttcaatatgacctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 33528718 - 33528631
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||| ||||  |||||||| | |||||||||| ||||| ||||||||||||||||    
T  33528718 aagattgttgacccagttcggtccaatatgacctaatatgggaaagagagcaaccctccaatccactatgatgaaagtgttacaaaag 33528631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 10707348 - 10707262
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctgggagagag--cagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||||| | |||||||| |||||| |||| |||||  || |||||||||||| ||||| ||||||||||||||||    
T  10707348 agattgttgacccagttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaag 10707262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 8390244 - 8390160
Alignment:
Q  77 attgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||| | |||| ||| |||||| ||||  ||||||||||||||||||||| ||||| |||||||||| |||||    
T  8390244 attgttgacccagttcggtccaaaatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaag 8390160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 42039766 - 42039684
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctg--ggagagagcagctctccaatccaatatga-gaaagtgttac 152  Q
    ||||||||||| | ||||| | |||||||| |||||||||  |||||||||||||||| |||||| ||||| |||||||||||    
T  42039766 aagattgttgatctagttcggtccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttac 42039684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 16940306 - 16940219
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgggagagag--cagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| | |||||||| | ||||||||| || ||  |||| |||||||||| ||||| ||||||||||||||||    
T  16940306 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 16940219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 17010971 - 17010884
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgggagagag--cagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| | |||||||| | ||||||||| || ||  |||| |||||||||| ||||| ||||||||||||||||    
T  17010971 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 17010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 39482931 - 39483018
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||| ||||| | |||||||| |||||| ||||  |||||||||  |||||||||| ||||| |||| |||||||||||    
T  39482931 aagattgttgacctagttcggtccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaag 39483018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 8e-54; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 51520436 - 51520596
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  51520436 aaaggaagaacaaaacaccgagaagattgttgacccagttctgccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 51520535  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  51520536 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 51520596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 37 - 191
Target Start/End: Original strand, 3813987 - 3814142
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatc 133  Q
    |||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3813987 aacaagataagcaagaaaggaagaacaaaacaccatgcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 3814086  T
Q  134 caatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    ||||||| ||||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  3814087 caatatgtgaaagtgttacaaaaggttacaaga--ctctagctttcaagctttacaca 3814142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 9224513 - 9224373
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  9224513 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 9224414  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    |||||||||||  ||||| |||||||  ||||||||||||||    
T  9224413 tacaaaaggttagaagaa-ctctagccttcaagctttacaca 9224373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 24741904 - 24742080
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  24741904 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 24742003  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||| |||||||||||||| |||| |||||| |  ||||  |||||| ||||||||| ||| |||||||||||||    
T  24742004 aatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattcta 24742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 45357397 - 45357243
Alignment:
Q  57 aagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaa 154  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  45357397 aagaacaaaacaccgagaagattgttgacccagttcagccaatatggcataatctgggggagagagcagctctccaatccaatatgagaaagtgttacaa 45357298  T
Q  155 aaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||| |||||  |||||||| |||||||||||||| | ||| |||||||||||||    
T  45357297 aaggttacaaga--ctctagctttcaagctttacacatgaacaaaccctagattcta 45357243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 9229300 - 9229160
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  9229300 aaaggaagaacaaaacaccgagaagattgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 9229201  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    |||||||||||  ||||| |||||||  ||||||||||||||    
T  9229200 tacaaaaggttagaagaa-ctctagccttcaagctttacaca 9229160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 29760605 - 29760738
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29760605 aacaagataagcaagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 29760704  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||||| |||||||||||||| |||| ||||||    
T  29760705 aatatgatgaaagtgttacaaagggttacaagaa 29760738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 56146817 - 56146677
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  56146817 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 56146718  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    ||||||||||| |||||| |||||||  ||||||||||||||    
T  56146717 tacaaaaggttacaagaa-ctctagccttcaagctttacaca 56146677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 45347918 - 45347763
Alignment:
Q  57 aagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaa 154  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  45347918 aagaacaaaacaccgagaagattgttgacccagttcagccaatatggcttaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaa 45347819  T
Q  155 aaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||| |||| | |||||||  |||||||||||||| | ||| |||||||||||||    
T  45347818 aaggttacaag-acctctagccttcaagctttacacatgaacaaaccctagattcta 45347763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 5732666 - 5732783
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctc 171  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||    
T  5732666 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctc 5732763  T
Q  172 tagctatcaagctttacaca 191  Q
    ||||| ||||||||||||||    
T  5732764 tagctttcaagctttacaca 5732783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 18855710 - 18855845
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  18855710 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttaca 18855808  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| ||||||||||||||||    
T  18855809 aaaggttacaaga--ctctagcttatcaagctttacaca 18855845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 28468660 - 28468542
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatctg--ggagagagcagctctccaatcca 135  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  28468660 caagataagcaagaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctggaggagagagcagctctccaatcca 28468562  T
Q  136 atatga-gaaagtgttacaa 154  Q
     ||||| |||||||||||||    
T  28468561 ctatgatgaaagtgttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 31985764 - 31985634
Alignment:
Q  40 aagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcag-ccaatatggcctaatctggg-agagagcagctctccaatccaa 136  Q
    |||||||||||||||||||||||||| ||||  | ||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||||||||||     
T  31985764 aagataagcaagaaaggaagaacaaacacaccaa-aagattgttgacccagttcggtccaatatgacctaatctggggagagagcagctctccaatccac 31985666  T
Q  137 tatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||| |||||||||||||| |||| ||||||    
T  31985665 tatgatgaaagtgttacaaagggttacaagaa 31985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 10047379 - 10047466
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  10047379 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 10047466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 16623390 - 16623303
Alignment:
Q  74 aagattgttgacccagttcagc-caatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| |  ||||||| ||||||||||  |||||||||||||||||||||| ||||| ||||||||||||||||    
T  16623390 aagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaag 16623303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 39245994 - 39246081
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  39245994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 39246081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 5396768 - 5396683
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| ||||||||||  |||||||||||||||||||||| ||||| ||||||||| ||||    
T  5396768 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaa 5396683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 36315326 - 36315241
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||| |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  36315326 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 36315241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 36329535 - 36329450
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||| |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  36329535 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 36329450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 38152536 - 38152449
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatat-gagaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| | |||||||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  38152536 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 6743507 - 6743425
Alignment:
Q  79 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  6743507 tgttgacccagttcggtccaatatgacctaatctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaag 6743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 5143260 - 5143345
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||| ||||| | |||||||| |||||||||||  ||||||||||||||||| ||| ||||| |||||||||||||||    
T  5143260 agattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 5269288 - 5269204
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||| ||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| |||||||||||||    
T  5269288 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 3796616 - 3796529
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||| |  ||||||||||| ||||| |||||| ||||| ||||||||||||||||    
T  3796616 aagattgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaag 3796529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 5147678 - 5147763
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||||||||| | |||||||| |||||| |  ||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  5147678 agattgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaa 5147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 3777550 - 3777634
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||||||||||||||| | |||||||  |||||||| |  ||||||| |||||||||||||| ||||| ||||||||||||||    
T  3777550 agattgttgacccagttcggtccaatataacctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaa 3777634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 16630773 - 16630690
Alignment:
Q  78 ttgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||| ||||| | |||||||| | ||||||||  |||||| ||||||||||||||| ||||| ||||||||||||||||    
T  16630773 ttgttgacctagttcggtccaatatgacataatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaag 16630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 24333809 - 24333896
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||| || |||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||| ||||||||||||    
T  24333809 aagattgttaactcagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 54867184 - 54867269
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct-gggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    ||||||||||||||||||| | |||||||| |||| ||| ||||||||||||| || ||||| | ||||| |||| ||||||||||    
T  54867184 aagattgttgacccagttcggtccaatatgacctagtctggggagagagcagcccttcaatcaactatgatgaaaatgttacaaaa 54867269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 53 - 210
Target Start/End: Original strand, 41398216 - 41398374
Alignment:
Q  53 aaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgtt 150  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  41398216 aaggaagaacaaaacaccgagaagattgttgacccaggtcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgtt 41398315  T
Q  151 acaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||| |||||  |||||||  |||||||||||||| | ||| |||||||||||||    
T  41398316 acaaaaggttacaaga--ctctagccttcaagctttacacatgaacaaaccctagattcta 41398374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 24787498 - 24787321
Alignment:
Q  37 aacaagataagcaagaaa-ggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  24787498 aacaagataagcaagaaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggggagagcagctctccaatc 24787399  T
Q  134 caatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||||||||||||||| |||| |||||| |  ||||  |||||| ||||||||| ||| | |||||||||||    
T  24787398 caatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagcattacacaagaacaaatcctagattcta 24787321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 53 - 210
Target Start/End: Original strand, 41390561 - 41390719
Alignment:
Q  53 aaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgtt 150  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  41390561 aaggaagaacaaaacatcgagaagattgttgacccagatcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgtt 41390660  T
Q  151 acaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||| |||||  |||||||  |||||||||||||| | ||| |||||||||||||    
T  41390661 acaaaaggttacaaga--ctctagccttcaagctttacacatgaacaaaccctagattcta 41390719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 25445191 - 25445055
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  25445191 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttaca 25445092  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| ||||||||||||||||    
T  25445091 aaaggttacaaga--ctctagcttatcaagctttacaca 25445055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 24202903 - 24202769
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  24202903 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 24202804  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  24202803 cactatgatgaaagtgttacaaagggttacaagaa 24202769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 39445483 - 39445618
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  39445483 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttaca 39445581  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| ||||||||||||||||    
T  39445582 aaaggttacaaga--ctctagcttatcaagctttacaca 39445618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 1055113 - 1054978
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| | ||||||||||    
T  1055113 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcaactctccaatccaatatgtg-aagtgttaca 1055015  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| ||||||||||||||||    
T  1055014 aaaggttacaaga--ctctagcttatcaagctttacaca 1054978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 44023975 - 44023840
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  44023975 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttaca 44023877  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| | ||||||||||||||    
T  44023876 aaaggttacaaga--ctctagcttgtcaagctttacaca 44023840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 43988566 - 43988424
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    |||||||||||||  || ||||||||| |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||    
T  43988566 aagaacaaaacaccaagcaagattgtttacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttaca 43988467  T
Q  154 aaag-gttgcaagaagctctagc-tatcaagctttacacaagaca 196  Q
    |||| ||| ||||||  |||||| |||||||||||||||||||||    
T  43988466 aaagagttacaagaa--tctagcttatcaagctttacacaagaca 43988424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 19358975 - 19358843
Alignment:
Q  39 caagataagcaagaaa-ggaagaacaaaacac-tgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||| ||||||||||| ||| | | ||||||||||||||||||||| ||||||| |||||| |  |||||||||||||||||||||||    
T  19358975 caagataagcaagaaaaggaagaacaaa-cacatcaaaagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19358877  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    | ||||| |||||||||||||| |||| ||||||    
T  19358876 actatgatgaaagtgttacaaagggttacaagaa 19358843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 19361564 - 19361432
Alignment:
Q  39 caagataagcaagaaa-ggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||| ||||||||||| ||||  | ||||||||||||||||||||| ||||||| |||||| |  |||||||||||||||||||||||    
T  19361564 caagataagcaagaaaaggaagaacaaacacaccaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19361466  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    | ||||| |||||||||||||| |||| ||||||    
T  19361465 actatgatgaaagtgttacaaagggttacaagaa 19361432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 19380204 - 19380072
Alignment:
Q  39 caagataagcaagaaa-ggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatcc 134  Q
    |||||||||||||||| ||||||||||| ||||  | ||||||||||||||||||||| ||||||| |||||| |  |||||||||||||||||||||||    
T  19380204 caagataagcaagaaaaggaagaacaaacacaccaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19380106  T
Q  135 aatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    | ||||| |||||||||||||| |||| ||||||    
T  19380105 actatgatgaaagtgttacaaagggttacaagaa 19380072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 47704033 - 47703946
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  47704033 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 26644994 - 26644909
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  26644994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaa 26644909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 9476261 - 9476348
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||  |||||||||||||||||||||||| ||||| |||||| |||||||||    
T  9476261 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaag 9476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 19072928 - 19073015
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| || || ||||||||||||||||    
T  19072928 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 19073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 19120818 - 19120905
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| || || ||||||||||||||||    
T  19120818 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 19120905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 13598398 - 13598485
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  13598398 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 13598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 16124613 - 16124526
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||| |||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  16124613 aagattgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 16124526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 27104469 - 27104382
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||| |||||| | |||||||  |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  27104469 aagattgttgacacagttcggtccaatataacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 27104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 29651811 - 29651898
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||| |||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  29651811 aagatttttgacccagttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 3281708 - 3281793
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||| |||||||||||| | |||||||| |||||||||||  |||||||||||||||||||||  |||| ||||||||||||||    
T  3281708 aagattattgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaa 3281793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 37069770 - 37069855
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  37069770 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctccgatccactatgatgaaagtgttacaaa 37069855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 775672 - 775759
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| | |||||||| |||||||||||  |||||| |||||||||||||| || || ||||||||||||||||    
T  775672 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaaag 775759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 47098921 - 47098837
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| || ||||||||  |||||||||| |||||||||| || || |||||||||||||    
T  47098921 aagattgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 47098837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 13604720 - 13604635
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||  |  ||||||| |||||| |  |||||||||||||||||||||||| ||||| |||| |||||||||    
T  13604720 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaa 13604635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 21536666 - 21536581
Alignment:
Q  74 aagattgttgacccagttcagccaata-tggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| |  || | || |||||||||||  ||||||||||||||||||||| ||| | ||||||||||||||    
T  21536666 aagattgttgacccagttcggtaaaaaatgacctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaa 21536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 35168 - 35028
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  35168 aaaggaagaacaaaacaccgagaagattgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 35069  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacaca 191  Q
    |||||||||||  ||||| |||||||  ||||||||||||||    
T  35068 tacaaaaggttagaagaa-ctctagccttcaagctttacaca 35028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 5e-49; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 12406310 - 12406470
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||    
T  12406310 aaagaaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagaatagctctccaatccaatatgagaaagtgt 12406409  T
Q  150 tacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||| |||||| |||||||  |||||||||||||| | ||| |||||||||||||    
T  12406410 tacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattcta 12406470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 20357681 - 20357504
Alignment:
Q  37 aacaagataagcaagaaa-ggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatc 133  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  20357681 aacaagataagcaagaaaaggaagaacaaaataccaagaagattgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatc 20357582  T
Q  134 caatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||||||||||||||| |||| |||||| |  ||||  |||||||||||||||| |||  ||||||||||||    
T  20357581 caatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagctttacacaagaacatgccctagattcta 20357504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 31109706 - 31109530
Alignment:
Q  37 aacaagataagcaagaaa-ggaagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaat 132  Q
    |||||||||| ||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31109706 aacaagataaacaagaaaaggaagaacaaaacaccgaacaagattgttgacccagttcagccaatatggcctaatctaggggagagagcagctctccaat 31109607  T
Q  133 ccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||||||||||||||||||||||| |||||  |||||||  ||||||||| |||| | ||| |||||||||||||    
T  31109606 ccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttgcacatgaacaaaccctagattcta 31109530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 4866709 - 4866819
Alignment:
Q  52 aaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  4866709 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgt 4866808  T
Q  150 tacaaaaggtt 160  Q
    |||||||||||    
T  4866809 tacaaaaggtt 4866819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 55 - 210
Target Start/End: Original strand, 12396893 - 12397050
Alignment:
Q  55 ggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttac 152  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||    
T  12396893 ggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagaacagctctccaatccaatatgagaaagtgttac 12396992  T
Q  153 aaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    |||||||| |||||| |||||||  | || ||||||||| | ||| |||||||||||||    
T  12396993 aaaaggttacaagaa-ctctagcctttaatctttacacatgaacaaaccctagattcta 12397050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 24024450 - 24024273
Alignment:
Q  37 aacaagataagcaagaaa-ggaagaacaaaa-cactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaa 131  Q
    |||||||||||||||||| |||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  24024450 aacaagataagcaagaaaaggaagaacaaaaacaccgaacaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 24024351  T
Q  132 tccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattcta 210  Q
    ||||||||||||||||||||||||| ||| |||||  |||||||  |||||||||||||| | ||| |||||||||||||    
T  24024350 tccaatatgagaaagtgttacaaaatgttacaaga--ctctagccttcaagctttacacatgaacaaaccctagattcta 24024273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 19992296 - 19992432
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  19992296 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttaca 19992395  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| ||||||||||||||||    
T  19992396 aaaggttacaaga--ctctagcttatcaagctttacaca 19992432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 2057928 - 2058062
Alignment:
Q  37 aacaagataagcaagaaa-ggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    |||||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2057928 aacaagataagcaataaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 2058027  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    |||||||| |||||||||||||| |||| ||||||    
T  2058028 caatatgatgaaagtgttacaaagggttacaagaa 2058062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 21639771 - 21639905
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  21639771 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 21639870  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||| | |||||||||||||| |||| ||||||    
T  21639871 cactataatgaaagtgttacaaagggttacaagaa 21639905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 1533578 - 1533444
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||| ||||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  1533578 aacaatataagcaagaaagaaagaacaaacacaccaataagattgttgacccagttcagccaatatggcctaatctgggggagagagcatctctccaatc 1533479  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    |||||||| |||||||||||||| |||| ||||||    
T  1533478 caatatgatgaaagtgttacaaagggttacaagaa 1533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 18408727 - 18408860
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  18408727 aacaagataagcaagaaagaaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 18408825  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  18408826 cagtatgatgaaagtgttacaaagggttacaagaa 18408860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 18413606 - 18413736
Alignment:
Q  39 caagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct-gggagagagcagctctccaatccaa 136  Q
    ||||||||||||||||| ||||||||| ||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  18413606 caagataagcaagaaagaaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctggggagagagcagctctccaatccac 18413704  T
Q  137 tatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    ||||| |||||||||||||| |||| ||||||    
T  18413705 tatgatgaaagtgttacaaagggttacaagaa 18413736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 21645969 - 21646103
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  21645969 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctagggaagagagcagctctccaatc 21646068  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||| ||| |||| ||||||    
T  21646069 cactatgatgaaagtgttaaaaagggttacaagaa 21646103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 24261407 - 24261283
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  24261407 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 24261310  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  24261309 ctagcttatcaagctttacacaagaca 24261283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 24266286 - 24266162
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  24266286 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 24266189  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  24266188 ctagcttatcaagctttacacaagaca 24266162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 16880074 - 16880197
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctc 171  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||    
T  16880074 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaa--tc 16880171  T
Q  172 tagc-tatcaagctttacacaagaca 196  Q
    |||| |||||||||||||||||||||    
T  16880172 tagcttatcaagctttacacaagaca 16880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 16884930 - 16885053
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctc 171  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||    
T  16884930 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaa--tc 16885027  T
Q  172 tagc-tatcaagctttacacaagaca 196  Q
    |||| |||||||||||||||||||||    
T  16885028 tagcttatcaagctttacacaagaca 16885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 21812340 - 21812229
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||| | |||| |||||    
T  21812340 aagaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctttccaatccaatatgtg-aagtcttaca 21812242  T
Q  154 aaaggttgcaaga 166  Q
    ||||||| |||||    
T  21812241 aaaggttccaaga 21812229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 29159803 - 29159890
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  29159803 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 29159890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 21983285 - 21983370
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||    
T  21983285 agattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 46516407 - 46516320
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  46516407 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 46516320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 49091661 - 49091748
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||||| || |||||||| |||||||||||  |||||||| |||||||||||| ||||| ||||||||||||||||    
T  49091661 aagattgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaag 49091748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 47263678 - 47263757
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctgggagagagcagctctccaatccaatatga-gaaagtgtta 151  Q
    ||||||||||||||||||| | |||||||| |||||| |||| |||||||||||||||||||| ||||| ||||||||||    
T  47263678 aagattgttgacccagttcggtccaatatgacctaatatgggggagagcagctctccaatccactatgatgaaagtgtta 47263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 55948 - 56034
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||| |||||||||||| | |||||||| ||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||    
T  55948 aagattattgacccagttcggtccaatatgacctaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 56034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 21988909 - 21988992
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatctgggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 156  Q
    |||||||||||||||||| | |||||||| ||||||||||  ||||||| |||||||||||| | ||| |||||||||||||||    
T  21988909 agattgttgacccagttcggtccaatatgacctaatctggaggagagcaactctccaatccactttgatgaaagtgttacaaaa 21988992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 44848781 - 44848696
Alignment:
Q  74 aagattgttgacccagttcagc-caatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| |  ||||||| ||||| |||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  44848781 aagattgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 44848696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 9190105 - 9190021
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| |||| ||||||  ||||||||||||||||||||| || || |||||||||||||    
T  9190105 aagattgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 9190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 20284089 - 20284173
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| || || |||||||||||||    
T  20284089 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 20284173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 2479337 - 2479421
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct-gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| |  ||||||| |||||||| ||| ||||||||||||| |||||| ||||| ||||||||||||||    
T  2479337 aagattgttgacccagttcggttcaatatgacctaatctagggggagagcagctctcaaatccactatgatgaaagtgttacaaa 2479421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 2647793 - 2647706
Alignment:
Q  74 aagattgttgacccagttcagcc-aatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||| ||| ||| |||||| |||| ||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  2647793 aagattgttgacccaattcggcccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 2647706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 33332547 - 33332460
Alignment:
Q  74 aagattgttgacccagttc-agccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | | |||||| |||||||||||  |||||||||| |||||||||| || || ||||||||||||||||    
T  33332547 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaag 33332460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 2580390 - 2580474
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||| ||| | |||||||| |||| ||||||  ||||||||||||||||||||| || || |||||||||||||    
T  2580390 aagattgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 2580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 35960816 - 35960901
Alignment:
Q  74 aagattgttgacccagttcagc-caatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||| ||||| |  ||||||| |||||||||||  |||||||||| |||||| ||| ||||| ||||||||||||||    
T  35960816 aagattgttgaccgagttcggttcaatatgacctaatctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaa 35960901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 9185262 - 9185178
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    ||||||||||||||||||| | |||||||  |||| ||||||  |||||| |||||||||||||| || || |||||||||||||    
T  9185262 aagattgttgacccagttcggtccaatataacctagtctgggggagagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 18086 - 17952
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  18086 aacaagataagcaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 17987  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  17986 cactatgatgaaagtgttacaaagggttacaagaa 17952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 24179 - 24045
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaa-acactgagaagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatc 133  Q
    ||||||||||| ||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  24179 aacaagataagaaagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 24080  T
Q  134 caatatga-gaaagtgttacaaaaggttgcaagaa 167  Q
    || ||||| |||||||||||||| |||| ||||||    
T  24079 cactatgatgaaagtgttacaaagggttacaagaa 24045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 346 - 481
Alignment:
Q  57 aagaacaaaacactgag-aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttaca 153  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  346 aagaacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttaca 444  T
Q  154 aaaggttgcaagaagctctagc-tatcaagctttacaca 191  Q
    ||||||| |||||  ||||||| ||||||||||||||||    
T  445 aaaggttacaaga--ctctagcttatcaagctttacaca 481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 14393 - 14269
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  14393 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 14296  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  14295 ctagcttatcaagctttacacaagaca 14269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 19249 - 19125
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||| ||||||| ||  |||||||||||| ||| ||||||  |    
T  19249 aagattgttgacccagttcagccattgtggcctaatctgggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagagttacaagaa--t 19152  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  19151 ctagcttatcaagctttacacaagaca 19125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 2335 - 2211
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  2335 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 2238  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  2237 ctagcttatcaagctttacacaagaca 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 149040 - 148916
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagct 170  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||  |    
T  149040 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--t 148943  T
Q  171 ctagc-tatcaagctttacacaagaca 196  Q
    ||||| |||||||||||||||||||||    
T  148942 ctagcttatcaagctttacacaagaca 148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 182048 - 181980
Alignment:
Q  74 aagattgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatg 140  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  182048 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatg 181980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 369 - 300
Alignment:
Q  37 aacaagataagcaagaaaggaagaacaaaacactgagaagattgttgacccagttcagccaatatggcct 106  Q
    |||||||||||| |||||| |||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  369 aacaagataagctagaaagaaagaacaaaacaccaagaagattgttgacctagttcagccaatatggcct 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 8516 - 8431
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  8516 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 8431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 85684 - 85768
Alignment:
Q  75 agattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    |||||||||||||||||||| |||||||| ||||||||  |||||||||| |||||||||||||  |||| ||||||||||||||    
T  85684 agattgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaa 85768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 5683 - 5770
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  5683 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 2492 - 2579
Alignment:
Q  74 aagattgttgacccagttc-agccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||||||   |||||||| ||||||||  |||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  2492 aagattgttgacccagttcgctccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaag 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 133377 - 133292
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||  |  ||||||| |||||| |  |||||||||||||||||||||||| ||||| |||| |||||||||    
T  133377 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaa 133292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 44058 - 43973
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | ||||||||  ||| ||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  44058 aagattgttgacccagttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 43973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 36929 - 36844
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 155  Q
    ||||||||||||||||||| | |||||||| ||||||||  || |||||||||||| |||| ||| ||||| ||||||||||||||    
T  36929 aagattgttgacccagttcggtccaatatgacctaatctagggaagagagcagctcgccaacccactatgatgaaagtgttacaaa 36844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 10729 - 10816
Alignment:
Q  74 aagattgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||| |||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| || || ||||||||||||||||    
T  10729 aagattattgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 10816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 45253 - 45337
Alignment:
Q  74 aagattgttgacccagttcagc-caatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 154  Q
    |||||||||||| |||||| |  ||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||| |||||||    
T  45253 aagattgttgactcagttcggttcaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagcgttacaa 45337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 17266 - 17350
Alignment:
Q  77 attgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 157  Q
    |||||||||||||||| |  ||||||| |||||| ||||  |||||||| | |||||||||| ||||| ||||||||||||||||    
T  17266 attgttgacccagttcggttcaatatgacctaatatgggaaagagagcaaccctccaatccattatgatgaaagtgttacaaaag 17350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University