View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5949-Insertion-5 (Length: 670)

Name: NF5949-Insertion-5
Description: NF5949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5949-Insertion-5
NF5949-Insertion-5
[»] chr4 (66 HSPs)
chr4 (60-474)||(10166521-10166931)
chr4 (593-670)||(1166633-1166710)
chr4 (593-670)||(1169115-1169192)
chr4 (593-670)||(7400211-7400288)
chr4 (593-670)||(10137885-10137962)
chr4 (593-670)||(13890998-13891075)
chr4 (593-670)||(32206598-32206675)
chr4 (593-670)||(40950939-40951016)
chr4 (593-670)||(53274622-53274699)
chr4 (593-670)||(55188164-55188241)
chr4 (593-668)||(6940180-6940255)
chr4 (593-670)||(7365790-7365867)
chr4 (593-670)||(27288476-27288553)
chr4 (593-670)||(28116845-28116922)
chr4 (593-670)||(34264634-34264711)
chr4 (593-670)||(55208490-55208567)
chr4 (593-670)||(11200827-11200904)
chr4 (593-666)||(11967006-11967079)
chr4 (593-670)||(17624654-17624731)
chr4 (593-670)||(26111372-26111449)
chr4 (593-670)||(55991813-55991890)
chr4 (593-670)||(36190061-36190138)
chr4 (593-663)||(8847939-8848009)
chr4 (593-670)||(23628828-23628906)
chr4 (593-670)||(18138329-18138406)
chr4 (593-663)||(11180909-11180979)
chr4 (593-663)||(24303805-24303875)
chr4 (596-670)||(29099630-29099704)
chr4 (593-663)||(40665522-40665591)
chr4 (593-663)||(41144307-41144377)
chr4 (593-663)||(43117519-43117589)
chr4 (596-663)||(26097656-26097723)
chr4 (593-663)||(17976448-17976518)
chr4 (593-663)||(22556965-22557035)
chr4 (593-663)||(46045797-46045867)
chr4 (593-663)||(49125546-49125616)
chr4 (596-670)||(32200721-32200796)
chr4 (622-669)||(34663865-34663912)
chr4 (596-663)||(40849729-40849796)
chr4 (593-663)||(37873648-37873718)
chr4 (591-649)||(51153499-51153557)
chr4 (594-663)||(8654318-8654386)
chr4 (596-663)||(20681196-20681263)
chr4 (596-663)||(39651736-39651803)
chr4 (593-663)||(346609-346679)
chr4 (596-653)||(32139419-32139476)
chr4 (622-663)||(45472468-45472509)
chr4 (602-670)||(24631113-24631180)
chr4 (601-663)||(28361503-28361565)
chr4 (593-663)||(51187618-51187688)
chr4 (622-663)||(52620639-52620680)
chr4 (593-664)||(8151202-8151272)
chr4 (620-663)||(10262027-10262069)
chr4 (620-663)||(21562386-21562428)
chr4 (620-663)||(24080098-24080140)
chr4 (596-659)||(30071346-30071409)
chr4 (620-663)||(43329907-43329949)
chr4 (601-651)||(25881932-25881982)
chr4 (593-643)||(40952041-40952091)
chr4 (193-306)||(31100253-31100370)
chr4 (638-670)||(45019226-45019258)
chr4 (602-665)||(9097481-9097543)
chr4 (620-663)||(26926968-26927010)
chr4 (620-663)||(51449973-51450015)
chr4 (7-39)||(10167002-10167034)
chr4 (620-664)||(18002499-18002543)
[»] chr7 (46 HSPs)
chr7 (591-670)||(23639415-23639494)
chr7 (591-670)||(37669269-37669348)
chr7 (593-670)||(10999106-10999183)
chr7 (593-670)||(17278148-17278225)
chr7 (593-670)||(27031231-27031308)
chr7 (593-670)||(29448719-29448796)
chr7 (593-670)||(40239899-40239976)
chr7 (593-670)||(41426957-41427034)
chr7 (593-669)||(12907906-12907982)
chr7 (591-670)||(45620643-45620722)
chr7 (596-670)||(40789173-40789247)
chr7 (593-670)||(1448094-1448171)
chr7 (593-670)||(18956300-18956377)
chr7 (593-670)||(38045651-38045728)
chr7 (593-664)||(32960798-32960869)
chr7 (593-670)||(43156186-43156262)
chr7 (593-663)||(41343322-41343392)
chr7 (593-664)||(44651884-44651955)
chr7 (593-663)||(4400067-4400137)
chr7 (597-663)||(4406633-4406699)
chr7 (593-663)||(47840731-47840801)
chr7 (602-663)||(4615393-4615454)
chr7 (596-670)||(4408041-4408115)
chr7 (596-663)||(20482280-20482347)
chr7 (593-663)||(6607097-6607167)
chr7 (593-663)||(36769226-36769296)
chr7 (593-662)||(21134358-21134427)
chr7 (593-663)||(5526108-5526175)
chr7 (604-663)||(4404295-4404354)
chr7 (593-663)||(5483406-5483476)
chr7 (622-663)||(4492465-4492506)
chr7 (622-663)||(43111035-43111076)
chr7 (620-663)||(20135105-20135148)
chr7 (620-663)||(19036360-19036402)
chr7 (620-663)||(20718234-20718276)
chr7 (620-663)||(29488481-29488523)
chr7 (620-663)||(33232655-33232697)
chr7 (620-663)||(34284797-34284839)
chr7 (596-647)||(40036032-40036083)
chr7 (602-660)||(3840021-3840079)
chr7 (593-667)||(23154632-23154705)
chr7 (622-663)||(16933500-16933541)
chr7 (622-663)||(16938883-16938924)
chr7 (620-663)||(20762915-20762957)
chr7 (593-647)||(36765592-36765646)
chr7 (596-642)||(42915378-42915424)
[»] scaffold0197 (1 HSPs)
scaffold0197 (593-670)||(25703-25780)
[»] chr8 (57 HSPs)
chr8 (593-670)||(17046012-17046089)
chr8 (593-670)||(17313543-17313620)
chr8 (593-670)||(39685417-39685494)
chr8 (593-670)||(14718861-14718938)
chr8 (593-670)||(27467706-27467783)
chr8 (593-670)||(34805783-34805860)
chr8 (595-670)||(41360984-41361059)
chr8 (593-670)||(7219373-7219450)
chr8 (593-670)||(16239170-16239247)
chr8 (593-670)||(43817966-43818043)
chr8 (593-662)||(44602940-44603009)
chr8 (593-670)||(44908490-44908567)
chr8 (593-670)||(2184412-2184489)
chr8 (593-670)||(36216578-36216655)
chr8 (593-664)||(16845028-16845099)
chr8 (593-663)||(169707-169777)
chr8 (593-663)||(6816033-6816103)
chr8 (593-670)||(11924761-11924839)
chr8 (593-663)||(36059278-36059348)
chr8 (593-663)||(37034826-37034896)
chr8 (593-663)||(38139313-38139383)
chr8 (601-663)||(26518805-26518867)
chr8 (593-670)||(39486030-39486108)
chr8 (591-663)||(38137719-38137791)
chr8 (593-663)||(1877580-1877650)
chr8 (593-663)||(2190649-2190719)
chr8 (593-663)||(11579194-11579264)
chr8 (593-663)||(38909288-38909358)
chr8 (593-659)||(39525458-39525524)
chr8 (593-663)||(42844281-42844350)
chr8 (593-670)||(34997525-34997602)
chr8 (593-650)||(41526324-41526381)
chr8 (621-664)||(1922389-1922432)
chr8 (593-648)||(39997991-39998046)
chr8 (593-662)||(15310398-15310468)
chr8 (593-662)||(15490767-15490837)
chr8 (601-670)||(44655061-44655130)
chr8 (593-653)||(42984002-42984062)
chr8 (620-663)||(20665621-20665663)
chr8 (610-661)||(39201524-39201574)
chr8 (596-663)||(45139055-45139122)
chr8 (596-653)||(12261474-12261532)
chr8 (596-646)||(27914929-27914979)
chr8 (596-646)||(27961348-27961398)
chr8 (623-663)||(1921795-1921835)
chr8 (622-670)||(33848722-33848770)
chr8 (604-651)||(9275854-9275901)
chr8 (620-663)||(30550984-30551026)
chr8 (591-653)||(40048676-40048739)
chr8 (620-663)||(44215733-44215775)
chr8 (593-647)||(14449613-14449667)
chr8 (596-646)||(27748853-27748903)
chr8 (596-646)||(27877985-27878035)
chr8 (596-646)||(28018166-28018216)
chr8 (596-642)||(41904778-41904824)
chr8 (596-642)||(45296790-45296836)
chr8 (593-658)||(34325869-34325934)
[»] chr6 (29 HSPs)
chr6 (593-670)||(3850220-3850297)
chr6 (593-670)||(18593612-18593689)
chr6 (593-670)||(33945825-33945902)
chr6 (593-670)||(559722-559799)
chr6 (593-670)||(20791541-20791618)
chr6 (593-670)||(24046562-24046639)
chr6 (593-670)||(28472216-28472293)
chr6 (593-670)||(32244372-32244449)
chr6 (594-663)||(6018577-6018646)
chr6 (594-663)||(6833553-6833622)
chr6 (593-663)||(5414564-5414634)
chr6 (593-663)||(10945711-10945781)
chr6 (593-663)||(34207005-34207075)
chr6 (593-663)||(34247757-34247827)
chr6 (593-663)||(7541107-7541177)
chr6 (593-663)||(24162794-24162864)
chr6 (593-663)||(29043209-29043279)
chr6 (593-663)||(173064-173134)
chr6 (593-663)||(17505488-17505558)
chr6 (601-663)||(29859411-29859473)
chr6 (596-664)||(3053920-3053987)
chr6 (596-663)||(18314008-18314074)
chr6 (593-647)||(19988908-19988962)
chr6 (620-663)||(247420-247462)
chr6 (620-663)||(12582487-12582529)
chr6 (596-658)||(8866970-8867032)
chr6 (620-662)||(29976317-29976359)
chr6 (596-653)||(28231080-28231136)
chr6 (610-663)||(33976004-33976056)
[»] chr5 (57 HSPs)
chr5 (593-670)||(2475276-2475353)
chr5 (593-670)||(6928362-6928439)
chr5 (593-670)||(31884667-31884744)
chr5 (594-670)||(24027863-24027939)
chr5 (593-670)||(16050776-16050853)
chr5 (593-670)||(24758975-24759052)
chr5 (593-670)||(26379207-26379284)
chr5 (593-670)||(31939837-31939914)
chr5 (593-670)||(42110681-42110758)
chr5 (591-670)||(3297825-3297904)
chr5 (593-670)||(665564-665641)
chr5 (593-670)||(4374859-4374936)
chr5 (593-670)||(32261717-32261794)
chr5 (593-663)||(27176478-27176548)
chr5 (593-670)||(5589469-5589546)
chr5 (593-666)||(39803855-39803928)
chr5 (593-670)||(42322869-42322946)
chr5 (593-663)||(2530085-2530155)
chr5 (593-655)||(25821231-25821293)
chr5 (593-663)||(40308340-40308410)
chr5 (593-663)||(789028-789098)
chr5 (593-663)||(28746320-28746390)
chr5 (593-669)||(15976476-15976552)
chr5 (591-663)||(40506802-40506874)
chr5 (596-663)||(19270905-19270972)
chr5 (592-663)||(42416800-42416871)
chr5 (593-663)||(10042792-10042862)
chr5 (593-667)||(19361646-19361720)
chr5 (593-663)||(29383729-29383799)
chr5 (593-667)||(36083790-36083864)
chr5 (593-663)||(36088578-36088648)
chr5 (593-659)||(43396524-43396590)
chr5 (596-659)||(42111814-42111877)
chr5 (593-663)||(790063-790133)
chr5 (593-663)||(3246829-3246899)
chr5 (593-663)||(8314829-8314899)
chr5 (593-663)||(29874670-29874740)
chr5 (593-663)||(37147067-37147137)
chr5 (591-670)||(28990938-28991018)
chr5 (593-663)||(7536645-7536715)
chr5 (597-670)||(31958390-31958463)
chr5 (593-663)||(29382578-29382649)
chr5 (593-663)||(30503534-30503604)
chr5 (593-663)||(30543877-30543947)
chr5 (593-653)||(16166294-16166354)
chr5 (599-662)||(1060706-1060768)
chr5 (591-646)||(15875751-15875806)
chr5 (593-652)||(35380507-35380566)
chr5 (620-663)||(37461872-37461914)
chr5 (620-658)||(14720185-14720223)
chr5 (596-661)||(3213236-3213300)
chr5 (597-669)||(39782952-39783024)
chr5 (596-663)||(18041190-18041256)
chr5 (620-670)||(28887177-28887228)
chr5 (596-646)||(2001506-2001556)
chr5 (621-667)||(2463637-2463683)
chr5 (593-643)||(14205433-14205483)
[»] chr3 (60 HSPs)
chr3 (593-670)||(29500328-29500405)
chr3 (593-670)||(30269086-30269163)
chr3 (593-670)||(45599269-45599346)
chr3 (593-670)||(54510389-54510466)
chr3 (593-670)||(4018912-4018989)
chr3 (593-670)||(14587389-14587466)
chr3 (591-670)||(2909428-2909507)
chr3 (591-670)||(29450655-29450734)
chr3 (593-670)||(7040877-7040954)
chr3 (593-670)||(13450268-13450345)
chr3 (593-670)||(20849406-20849483)
chr3 (593-670)||(33932488-33932565)
chr3 (593-670)||(36592218-36592295)
chr3 (593-670)||(48545105-48545182)
chr3 (593-670)||(52461023-52461100)
chr3 (593-670)||(54741799-54741876)
chr3 (595-670)||(52674779-52674853)
chr3 (593-670)||(22347081-22347159)
chr3 (593-663)||(53022669-53022739)
chr3 (593-670)||(12101466-12101543)
chr3 (593-670)||(26881617-26881694)
chr3 (593-670)||(43316518-43316595)
chr3 (593-670)||(46757555-46757631)
chr3 (593-663)||(39721262-39721332)
chr3 (593-670)||(7265051-7265128)
chr3 (593-670)||(19536703-19536780)
chr3 (591-663)||(44762723-44762795)
chr3 (591-663)||(47719487-47719559)
chr3 (596-663)||(46090123-46090190)
chr3 (593-663)||(35690214-35690284)
chr3 (593-663)||(38361753-38361823)
chr3 (593-663)||(50739157-50739227)
chr3 (593-663)||(50773628-50773698)
chr3 (593-670)||(13337095-13337171)
chr3 (591-663)||(36987738-36987810)
chr3 (591-663)||(37013177-37013249)
chr3 (593-663)||(41990766-41990836)
chr3 (593-663)||(48961122-48961192)
chr3 (596-670)||(37413564-37413639)
chr3 (596-663)||(42187754-42187821)
chr3 (596-663)||(46850716-46850783)
chr3 (596-663)||(54113415-54113482)
chr3 (593-663)||(54203748-54203818)
chr3 (596-663)||(50933207-50933274)
chr3 (597-670)||(12996818-12996891)
chr3 (593-662)||(15496472-15496541)
chr3 (618-656)||(875840-875878)
chr3 (593-663)||(20996336-20996406)
chr3 (593-663)||(35906686-35906756)
chr3 (593-653)||(46088722-46088782)
chr3 (596-651)||(33899842-33899897)
chr3 (620-663)||(44075414-44075456)
chr3 (596-642)||(8238921-8238967)
chr3 (601-663)||(54195692-54195754)
chr3 (602-647)||(10617639-10617684)
chr3 (602-663)||(54835729-54835790)
chr3 (627-663)||(34433767-34433803)
chr3 (625-663)||(916278-916315)
chr3 (136-198)||(53292623-53292684)
chr3 (628-664)||(42617780-42617816)
[»] chr2 (36 HSPs)
chr2 (593-670)||(970949-971026)
chr2 (593-670)||(1835681-1835758)
chr2 (593-670)||(5166262-5166339)
chr2 (593-670)||(7233019-7233096)
chr2 (593-670)||(8878115-8878192)
chr2 (593-670)||(24926087-24926164)
chr2 (593-670)||(31972278-31972355)
chr2 (593-669)||(18166835-18166911)
chr2 (591-670)||(4631204-4631283)
chr2 (593-670)||(7274666-7274743)
chr2 (593-670)||(8683655-8683732)
chr2 (593-670)||(36085949-36086026)
chr2 (593-670)||(3324266-3324343)
chr2 (591-663)||(34912654-34912726)
chr2 (593-663)||(3243297-3243367)
chr2 (593-663)||(36078558-36078628)
chr2 (593-663)||(38879139-38879209)
chr2 (593-670)||(668296-668373)
chr2 (593-663)||(3079720-3079790)
chr2 (593-663)||(10120612-10120682)
chr2 (593-663)||(40202218-40202288)
chr2 (591-670)||(9799325-9799404)
chr2 (596-670)||(17032818-17032892)
chr2 (593-663)||(35423789-35423859)
chr2 (593-663)||(41452818-41452888)
chr2 (593-663)||(45474725-45474795)
chr2 (591-653)||(38709708-38709770)
chr2 (593-663)||(1117981-1118053)
chr2 (593-637)||(20313250-20313294)
chr2 (593-663)||(2180021-2180091)
chr2 (620-670)||(17051167-17051217)
chr2 (620-663)||(3708454-3708496)
chr2 (620-663)||(11868920-11868962)
chr2 (620-663)||(35360313-35360355)
chr2 (599-656)||(37522706-37522763)
chr2 (593-634)||(38959646-38959687)
[»] chr1 (49 HSPs)
chr1 (593-670)||(11583152-11583229)
chr1 (593-670)||(17585511-17585588)
chr1 (593-670)||(25659812-25659889)
chr1 (593-670)||(33373822-33373899)
chr1 (593-670)||(33642606-33642683)
chr1 (593-670)||(33895219-33895296)
chr1 (593-670)||(39327045-39327122)
chr1 (593-670)||(43120781-43120858)
chr1 (593-670)||(45104176-45104253)
chr1 (593-668)||(47037133-47037208)
chr1 (596-670)||(40432208-40432282)
chr1 (593-670)||(3265112-3265189)
chr1 (593-670)||(7833541-7833618)
chr1 (593-670)||(9574857-9574934)
chr1 (593-670)||(11754230-11754307)
chr1 (593-670)||(33818096-33818173)
chr1 (593-670)||(33831927-33832004)
chr1 (593-670)||(33877564-33877641)
chr1 (593-670)||(33894089-33894166)
chr1 (593-670)||(36165523-36165600)
chr1 (593-670)||(38802301-38802378)
chr1 (593-666)||(41901702-41901775)
chr1 (593-669)||(14487326-14487402)
chr1 (593-670)||(46588093-46588170)
chr1 (593-663)||(24473553-24473623)
chr1 (593-663)||(43119116-43119186)
chr1 (593-663)||(17249038-17249108)
chr1 (593-663)||(36952715-36952785)
chr1 (593-663)||(43123042-43123111)
chr1 (596-663)||(46040491-46040558)
chr1 (593-663)||(39879142-39879212)
chr1 (591-663)||(34078285-34078357)
chr1 (593-663)||(1322527-1322597)
chr1 (593-650)||(16097358-16097415)
chr1 (601-670)||(31638425-31638494)
chr1 (599-663)||(34652277-34652341)
chr1 (596-663)||(18091277-18091343)
chr1 (591-649)||(17366353-17366411)
chr1 (597-670)||(23730301-23730374)
chr1 (591-649)||(39729204-39729262)
chr1 (593-663)||(7308333-7308404)
chr1 (591-670)||(33932912-33932990)
chr1 (620-658)||(11606496-11606534)
chr1 (593-634)||(31215866-31215907)
chr1 (593-634)||(31221621-31221662)
chr1 (595-663)||(43124356-43124424)
chr1 (591-642)||(17670009-17670060)
chr1 (596-642)||(28568759-28568805)
chr1 (591-653)||(49223163-49223224)
[»] scaffold0481 (2 HSPs)
scaffold0481 (593-670)||(4514-4591)
scaffold0481 (593-670)||(7443-7520)
[»] scaffold0166 (1 HSPs)
scaffold0166 (593-670)||(1469-1546)
[»] scaffold0024 (2 HSPs)
scaffold0024 (591-663)||(90461-90533)
scaffold0024 (593-664)||(110529-110600)
[»] scaffold0178 (1 HSPs)
scaffold0178 (593-663)||(7294-7364)
[»] scaffold0198 (1 HSPs)
scaffold0198 (593-663)||(15263-15333)
[»] scaffold0244 (1 HSPs)
scaffold0244 (593-663)||(7576-7646)
[»] scaffold0768 (1 HSPs)
scaffold0768 (594-663)||(6306-6375)
[»] scaffold0027 (1 HSPs)
scaffold0027 (591-663)||(138029-138101)
[»] scaffold0020 (1 HSPs)
scaffold0020 (593-663)||(132659-132728)
[»] scaffold0003 (1 HSPs)
scaffold0003 (596-646)||(229101-229151)
[»] scaffold0318 (1 HSPs)
scaffold0318 (596-646)||(1072-1122)
[»] scaffold0038 (1 HSPs)
scaffold0038 (596-653)||(31577-31633)
[»] scaffold0078 (1 HSPs)
scaffold0078 (596-651)||(5737-5793)


Alignment Details
Target: chr4 (Bit Score: 292; Significance: 1e-164; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 60 - 474
Target Start/End: Complemental strand, 10166931 - 10166521
Alignment:
Q  60 tagtttgttttttcctgatacactcctggctcgcttagcaaatgtgctctgactcagaattattgctctttaccgatcttggtctttaagctcaaaaacc 159  Q
    |||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10166931 tagtttgttttttcttgatacgctcctggctcgcttagcaaatgcgcgctgactcagaattattgctctttaccagtcttggtctttaagctcaaaaacc 10166832  T
Q  160 tacaaaaattgaagggaaataggtaaaatgagcttaactggtattatgagcataagtactttatatttgtatgatttcatggttttcttgatattacttg 259  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||     ||| ||||||||||| |||||||||||||||||||||    
T  10166831 tacaaaaattgaaggaaaataggtaaaatgaacttaactggtattataagcataagta-----tatatgtatgatttcttggttttcttgatattacttg 10166737  T
Q  260 taaaataagttaacacgtgt-gtgaataaatatgtaaaataaccgaaaatctggtacttatcggttagcataggagctcccatcaaaatttatcttaayw 358  Q
    ||||| |||||||  ||| | ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||      
T  10166736 taaaacaagttaatgcgtatcgtgaataaatatgtaaaataaccaaaaatctggtacttatcaattagcataggagctcccatcaaaatttatcttaaca 10166637  T
Q  359 atatcatggatggaggatgccatctcactaaccggagttcaacaacttctttttcgactaaaagacaaccacaataacatcatttgaggactgaatttga 458  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10166636 atatcatggaaggaggatgccatctcactaaccgcggttcaacaacttctttttcgactaaaagacagccacaataacatcatttgaggactgaatttga 10166537  T
Q  459 tggaaactttctaaga 474  Q
    | ||||||||||||||    
T  10166536 ttgaaactttctaaga 10166521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 1166710 - 1166633
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1166710 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 1166633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 1169192 - 1169115
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1169192 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 1169115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 7400211 - 7400288
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7400211 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 7400288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 10137885 - 10137962
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10137885 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 10137962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 13890998 - 13891075
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13890998 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 13891075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 32206598 - 32206675
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32206598 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 32206675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 40951016 - 40950939
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40951016 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 40950939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 53274699 - 53274622
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53274699 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 53274622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 55188241 - 55188164
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55188241 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 55188164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 6940180 - 6940255
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtgg 668  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6940180 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtgg 6940255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7365867 - 7365790
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7365867 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 7365790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 27288476 - 27288553
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27288476 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtg 27288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 28116845 - 28116922
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28116845 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtg 28116922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 34264634 - 34264711
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34264634 ttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 34264711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 55208490 - 55208567
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55208490 ttctacagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 55208567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 11200904 - 11200827
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11200904 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtg 11200827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 666
Target Start/End: Original strand, 11967006 - 11967079
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggt 666  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11967006 ttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggt 11967079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 17624731 - 17624654
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17624731 ttctaaagttatttttaagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtg 17624654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 26111449 - 26111372
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  26111449 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttgtggtg 26111372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 55991890 - 55991813
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  55991890 ttctaaaattatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtg 55991813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 36190061 - 36190138
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  36190061 ttctaaagttatttttgagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattattttttgatggtg 36190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 8848009 - 8847939
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  8848009 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 8847939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 23628906 - 23628828
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattt-tttggtggtg 670  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23628906 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttctttggtggtg 23628828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 18138406 - 18138329
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18138406 ttctaaagttatttttaagttaaaagttctttggcataatattgtacaaaactttgaatttattattttttggtggtg 18138329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 11180979 - 11180909
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  11180979 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacattgaatttattatttttt 11180909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 24303805 - 24303875
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  24303805 ttctaaagttatttttaagttaaaagttatttggcaaaatattgtacaaaactttgaatttattatttttt 24303875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 596 - 670
Target Start/End: Original strand, 29099630 - 29099704
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||| ||||||| | ||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  29099630 taaagttatttttcagttaaaagttgtttggcaaaatattgtataaaactttaaatttattattttttggtggtg 29099704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 40665591 - 40665522
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  40665591 ttctaaagttatttttaagttaaag-ctgtttgacaaaatattgtacaaaactttgaatttattatttttt 40665522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 41144307 - 41144377
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  41144307 ttctaaagttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 41144377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 43117589 - 43117519
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||| ||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  43117589 ttctaaagttgtttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 43117519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 26097656 - 26097723
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  26097656 taaagttattttgaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 26097723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 17976518 - 17976448
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||    
T  17976518 ttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttattatttttt 17976448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 22557035 - 22556965
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| ||||||||| |||||||||||||||||||||||||||    
T  22557035 ttctaaagttatttttaagttaaaagttgtttgacaaaatattttacaaaactttgaatttattatttttt 22556965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 46045797 - 46045867
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| || ||||||    
T  46045797 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 46045867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 49125616 - 49125546
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||||||||||||||||||    
T  49125616 ttctaaagttatttttaagttaaaagttctttggcataatattgtacaaaactttgaatttattatttttt 49125546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 670
Target Start/End: Original strand, 32200721 - 32200796
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttatta-ttttttggtggtg 670  Q
    ||||||||||||| | ||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  32200721 taaagttatttttaaattaaaagttgtttggcagaatattgtacaaaactttgaatttattacttttttggtggtg 32200796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 622 - 669
Target Start/End: Complemental strand, 34663912 - 34663865
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattattttttggtggt 669  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34663912 tttggcaaaatattgtacaaaactttgaatttattattttttggtggt 34663865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 40849796 - 40849729
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| |||||||   |||||| |||||||||||||||||||||||||||||||||||||    
T  40849796 taaagttatttttaagttaaaaattgtttgtcaaaatattgtacaaaactttgaatttattatttttt 40849729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 37873648 - 37873718
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||||||  ||||||||||||||||||    
T  37873648 ttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaaagttgaatttattatttttt 37873718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 591 - 649
Target Start/End: Complemental strand, 51153557 - 51153499
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttga 649  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  51153557 aattctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttga 51153499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 8654318 - 8654386
Alignment:
Q  594 tctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||| |||||||   ||||||||||| ||||||||||||||||||||||||||||||||    
T  8654318 tctaaagttatttttaagttaaaaattgtttggcaaa-tattgtacaaaactttgaatttattatttttt 8654386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 20681263 - 20681196
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| | ||||||| |||||||||||| |||| ||||||||||||||||||    
T  20681263 taaagttatttttaagttaaaagttgtttggtaaaatattgtacgaaacattgaatttattatttttt 20681196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 39651803 - 39651736
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||| || ||||||    
T  39651803 taaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaactttgaattttttttttttt 39651736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 346609 - 346679
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| || ||||||| | | ||||||||| ||||||||||||| ||||||||||||||||||    
T  346609 ttctaaagttattgttaagttaaaagttctttggcaaactattgtacaaaacattgaatttattatttttt 346679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 596 - 653
Target Start/End: Complemental strand, 32139476 - 32139419
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    |||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  32139476 taaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 32139419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 622 - 663
Target Start/End: Original strand, 45472468 - 45472509
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45472468 tttggcaaaatattgtacaaaactttgaatttattatttttt 45472509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 24631113 - 24631180
Alignment:
Q  602 tatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||| ||||||| | ||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  24631113 tatttttaagttaaaagttgtttggaaaaatattgta-aatactttgaatttattattttttggtggtg 24631180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 601 - 663
Target Start/End: Original strand, 28361503 - 28361565
Alignment:
Q  601 ttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||| ||| || ||||||    
T  28361503 ttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgatttttttttttttt 28361565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 51187688 - 51187618
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||| ||||||||||| ||||||| | ||||||||| |||| ||||||||| |||||||||| ||||||||    
T  51187688 ttctgaagttatttttaagttaaaagttgtttggcagaataatgtacaaaattttgaatttaatatttttt 51187618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 622 - 663
Target Start/End: Complemental strand, 52620680 - 52620639
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  52620680 tttggcaaaatattgtacaaaactctgaatttattatttttt 52620639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 664
Target Start/End: Complemental strand, 8151272 - 8151202
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    ||||||| |||||||| ||||||| | |||||| |||||| |||||||||||||||||||| || |||||||    
T  8151272 ttctaaaattatttttaagttaaaagttgtttgacaaaat-ttgtacaaaactttgaatttttttttttttg 8151202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 10262027 - 10262069
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  10262027 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 10262069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 21562428 - 21562386
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  21562428 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 21562386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 24080098 - 24080140
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  24080098 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 24080140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 596 - 659
Target Start/End: Complemental strand, 30071409 - 30071346
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatt 659  Q
    ||||||||||||| | || || | ||||||||||||||| |||||||||||| |||||||||||    
T  30071409 taaagttatttttaactttaaagttgtttggcaaaatatcgtacaaaactttaaatttattatt 30071346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 43329949 - 43329907
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  43329949 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 43329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 25881982 - 25881932
Alignment:
Q  601 ttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaat 651  Q
    |||||||| ||||||| | ||||| ||||||||||||||||||||||||||    
T  25881982 ttatttttaagttaaaagttgtttagcaaaatattgtacaaaactttgaat 25881932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 593 - 643
Target Start/End: Complemental strand, 40952091 - 40952041
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaa 643  Q
    |||||||||||||||| ||||||| | |||||| |||||||||||||||||    
T  40952091 ttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaa 40952041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 31100253 - 31100370
Alignment:
Q  193 ttaactggtattatgagcataagtactttatatttgtatgattt-catg-gttttcttgatattacttgtaaaataagttaacacgtg-tgtgaataaat 289  Q
    |||| ||| ||||| || ||||| |||||||||||| |||||||  |||  ||||| ||||||||||||||||| ||||||| | ||| ||||||||| |    
T  31100253 ttaattggcattataagtataaggactttatatttgcatgatttatatgatttttcatgatattacttgtaaaacaagttaataagtgttgtgaataagt 31100352  T
Q  290 atgt-aaaataaccgaaa 306  Q
    |||| |||||||||||||    
T  31100353 atgtaaaaataaccgaaa 31100370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 638 - 670
Target Start/End: Original strand, 45019226 - 45019258
Alignment:
Q  638 acaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||||||||||    
T  45019226 acaaaactttgaatttattattttttggtggtg 45019258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 665
Target Start/End: Original strand, 9097481 - 9097543
Alignment:
Q  602 tatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttgg 665  Q
    ||||||| ||||||| | |||||||||||||||||||| ||||||||| ||| || ||||||||    
T  9097481 tatttttaagttaaatgttgtttggcaaaatattgtac-aaactttgattttttttttttttgg 9097543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 26926968 - 26927010
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  26926968 tgtttgacaaaatattgtacaaa-ctttgaatttattatttttt 26927010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 51450015 - 51449973
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  51450015 tgtttggcaaaatattgtac-aaactttaaatttattatttttt 51449973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 10167034 - 10167002
Alignment:
Q  7 caaatctgttattgaaaattccctaaaactctc 39  Q
    ||||||||||||||||||||||| |||||||||    
T  10167034 caaatctgttattgaaaattcccaaaaactctc 10167002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 620 - 664
Target Start/End: Original strand, 18002499 - 18002543
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||    
T  18002499 tgtttggaaaaatattgtacaaaactttgattttttttttttttg 18002543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 7e-35; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 591 - 670
Target Start/End: Original strand, 23639415 - 23639494
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23639415 aattctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 23639494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 591 - 670
Target Start/End: Original strand, 37669269 - 37669348
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37669269 aattctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 37669348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 10999183 - 10999106
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10999183 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 10999106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 17278225 - 17278148
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17278225 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 17278148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 27031231 - 27031308
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27031231 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 27031308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 29448719 - 29448796
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29448719 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 29448796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 40239899 - 40239976
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40239899 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 40239976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 41427034 - 41426957
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41427034 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 41426957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 593 - 669
Target Start/End: Complemental strand, 12907982 - 12907906
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 669  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12907982 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 12907906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 591 - 670
Target Start/End: Complemental strand, 45620722 - 45620643
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45620722 aattctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 45620643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 596 - 670
Target Start/End: Complemental strand, 40789247 - 40789173
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40789247 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 40789173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 1448171 - 1448094
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1448171 ttctaaagctatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 1448094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 18956300 - 18956377
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18956300 ttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtg 18956377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 38045728 - 38045651
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38045728 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaagctttgaatttattattttttggtggtg 38045651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 593 - 664
Target Start/End: Original strand, 32960798 - 32960869
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32960798 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttg 32960869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 43156262 - 43156186
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43156262 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaa-ttattattttttggtggtg 43156186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 41343322 - 41343392
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  41343322 ttctaaagttatttttaagttaaatgttgtttggcaaaatattgtacaaaactttgaatttattatttttt 41343392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 593 - 664
Target Start/End: Original strand, 44651884 - 44651955
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    |||||||||||||||| ||||||| | ||||||  |||||||||||||||||||||||||||||||||||||    
T  44651884 ttctaaagttatttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttattattttttg 44651955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 4400067 - 4400137
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||| ||||||||    
T  4400067 ttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttaatatttttt 4400137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 597 - 663
Target Start/End: Original strand, 4406633 - 4406699
Alignment:
Q  597 aaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  4406633 aaagttaattttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 4406699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 47840801 - 47840731
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| |||| || | ||||||||||||||||||||||||||||||||||| ||||||||    
T  47840801 ttctaaagttatttttaagttgaaagttgtttggcaaaatattgtacaaaactttgaatttagtatttttt 47840731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 602 - 663
Target Start/End: Complemental strand, 4615454 - 4615393
Alignment:
Q  602 tatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  4615454 tatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 4615393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 670
Target Start/End: Original strand, 4408041 - 4408115
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattat-tttttggtggtg 670  Q
    ||||||||||||| ||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  4408041 taaagttatttttaagttaaaagctgtttggcaaaatattgta-taaactttgaatttattatctttttggtggtg 4408115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 20482347 - 20482280
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| ||||| | ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  20482347 taaagttttttttaatttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 20482280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 6607167 - 6607097
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| |||||||  ||||||||||||||||| ||||||||||| |||||||||||||||    
T  6607167 ttctaaatttatttttaagttaaaatctgtttggcaaaatattatacaaaactttaaatttattatttttt 6607097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 36769296 - 36769226
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| |||||||||||||||    
T  36769296 ttctaaagttatttttaagttaaaagttgtttggcaaaataaagtacaaaactttaaatttattatttttt 36769226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 593 - 662
Target Start/End: Original strand, 21134358 - 21134427
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttt 662  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||| || |||||    
T  21134358 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgattttttttttttt 21134427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 5526175 - 5526108
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| |   |||| |||||||||||||||||||||||||||||||||||||    
T  5526175 ttctaaagttatttttaagttaaaag---tttgacaaaatattgtacaaaactttgaatttattatttttt 5526108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 604 - 663
Target Start/End: Complemental strand, 4404354 - 4404295
Alignment:
Q  604 tttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  4404354 tttttaagttaaaagttgtttggcaaaatattgtacaaaacattgaatttattatttttt 4404295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 5483476 - 5483406
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||| ||| || ||||||    
T  5483476 ttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaactttgatttttttttttttt 5483406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 622 - 663
Target Start/End: Original strand, 4492465 - 4492506
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4492465 tttggcaaaatattgtacaaaactttgaatttattatttttt 4492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 622 - 663
Target Start/End: Complemental strand, 43111076 - 43111035
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43111076 tttggcaaaatattgtacaaaactttgaatttattatttttt 43111035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 20135105 - 20135148
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  20135105 tgtttggcaaaatattgtacaaaactttgaatttaatatttttt 20135148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 19036360 - 19036402
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  19036360 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 19036402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 20718276 - 20718234
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  20718276 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 20718234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 29488523 - 29488481
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  29488523 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 29488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 33232655 - 33232697
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  33232655 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 33232697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 34284797 - 34284839
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  34284797 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 34284839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 596 - 647
Target Start/End: Original strand, 40036032 - 40036083
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaacttt 647  Q
    ||||||||||||| ||||||| | | ||||||||||||||||||||||||||    
T  40036032 taaagttatttttaagttaaaagttttttggcaaaatattgtacaaaacttt 40036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 602 - 660
Target Start/End: Complemental strand, 3840079 - 3840021
Alignment:
Q  602 tatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattt 660  Q
    ||||||| ||||||| | |||||| ||||||||||||||||||||||||| || |||||    
T  3840079 tatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatctaatattt 3840021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 593 - 667
Target Start/End: Complemental strand, 23154705 - 23154632
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtg 667  Q
    |||||||||||||||  ||||||| | |||||||||||||||||||||||||| ||| ||| || |||| |||||    
T  23154705 ttctaaagttatttta-agttaaaagttgtttggcaaaatattgtacaaaactatgattttttttttttgtggtg 23154632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 622 - 663
Target Start/End: Original strand, 16933500 - 16933541
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  16933500 tttgacaaaatattgtacaaaacattgaatttattatttttt 16933541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 622 - 663
Target Start/End: Original strand, 16938883 - 16938924
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  16938883 tttgacaaaatattgtacaaaacattgaatttattatttttt 16938924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 20762957 - 20762915
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  20762957 tgtttgacaaaatattgtacaaa-ctttgaatttattatttttt 20762915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 593 - 647
Target Start/End: Complemental strand, 36765646 - 36765592
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaacttt 647  Q
    |||||||||||||||| ||||||| | |||||| |||||||  ||||||||||||    
T  36765646 ttctaaagttatttttaagttaaaagttgtttgacaaaataaagtacaaaacttt 36765592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 642
Target Start/End: Complemental strand, 42915424 - 42915378
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaa 642  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  42915424 taaagctatttttaagttaaatgttgtttggcaaaatattgtacaaa 42915378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 25780 - 25703
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25780 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 25703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 17046012 - 17046089
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17046012 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 17046089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 17313543 - 17313620
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17313543 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 17313620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 39685494 - 39685417
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39685494 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 39685417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 14718938 - 14718861
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14718938 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattattttttggtggtg 14718861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 27467783 - 27467706
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27467783 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatttttttttggtggtg 27467706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 34805860 - 34805783
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34805860 ttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 34805783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 595 - 670
Target Start/End: Complemental strand, 41361059 - 41360984
Alignment:
Q  595 ctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41361059 ctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtg 41360984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7219450 - 7219373
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7219450 ttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtg 7219373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 16239170 - 16239247
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  16239170 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttatagtggtg 16239247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 43817966 - 43818043
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  43817966 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttattattttttggtggtg 43818043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 662
Target Start/End: Original strand, 44602940 - 44603009
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttt 662  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44602940 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttt 44603009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 44908567 - 44908490
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  44908567 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttgtggtg 44908490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 2184412 - 2184489
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2184412 ttctaaagttattttaaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattattttttggtggtg 2184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 36216578 - 36216655
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  36216578 ttctaaagttatttttgagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttttgtggtg 36216655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 593 - 664
Target Start/End: Complemental strand, 16845099 - 16845028
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  16845099 ttctaaagttatttttgaattaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttg 16845028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 169707 - 169777
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  169707 ttctaaagttatttttaagttaaaaactgtttggcaaaatattgtacaaaactttgaatttattatttttt 169777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 6816103 - 6816033
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  6816103 ttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 6816033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 11924839 - 11924761
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttt-ttggtggtg 670  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  11924839 ttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttcttggtggtg 11924761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 36059278 - 36059348
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  36059278 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 36059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 37034896 - 37034826
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  37034896 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 37034826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 38139383 - 38139313
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  38139383 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 38139313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 601 - 663
Target Start/End: Original strand, 26518805 - 26518867
Alignment:
Q  601 ttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26518805 ttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttt 26518867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 39486030 - 39486108
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatt-ttttggtggtg 670  Q
    ||||| |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39486030 ttctacagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattattttggtggtg 39486108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 38137719 - 38137791
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| | ||||||  ||||||||||||||||||||||||||||||||||||    
T  38137719 aattctaaagttatttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttattatttttt 38137791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 1877580 - 1877650
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| ||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  1877580 ttctaacgttatttttaagttaaaaattgtttggcaaaatattgtacaaaactttgaatttattatttttt 1877650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 2190649 - 2190719
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||  ||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  2190649 ttctaaaattattttgaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattatttttt 2190719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 11579264 - 11579194
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||| |||||||||||||||| ||||||||| |||||||||    
T  11579264 ttctaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaaatttgaatttgttatttttt 11579194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 38909358 - 38909288
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | || ||| ||||||||||||||||| |||||||||||||||||||    
T  38909358 ttctaaagttatttttaagttaaaagttgcttgacaaaatattgtacaaaattttgaatttattatttttt 38909288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 659
Target Start/End: Complemental strand, 39525524 - 39525458
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatt 659  Q
    |||||||||||||||| | ||||| | |||||||||||||||||| |||||||||||||||||||||    
T  39525524 ttctaaagttatttttaatttaaaagttgtttggcaaaatattgtgcaaaactttgaatttattatt 39525458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 42844350 - 42844281
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||| ||||||| |||||||||||||||    
T  42844350 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtac-aaactttaaatttattatttttt 42844281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 34997602 - 34997525
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||| |||||||||| ||||||| | |||||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  34997602 ttctatagttatttttaagttaaaagttgtttggcaaaatattgtacaaaattaggaatttattatttttttgtggtg 34997525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 593 - 650
Target Start/End: Complemental strand, 41526381 - 41526324
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaa 650  Q
    |||||||||||||||| ||||||| | ||||| |||||||||||||||||||||||||    
T  41526381 ttctaaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaactttgaa 41526324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 621 - 664
Target Start/End: Complemental strand, 1922432 - 1922389
Alignment:
Q  621 gtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  1922432 gtttgacaaaatattgtacaaaactttgaatttattattttttg 1922389  T

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Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 593 - 648
Target Start/End: Complemental strand, 39998046 - 39997991
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttg 648  Q
    |||||||||||||||||||||||| | ||||| |||||| ||||||||||||||||    
T  39998046 ttctaaagttatttttgagttaaaagttgtttagcaaaaaattgtacaaaactttg 39997991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 662
Target Start/End: Complemental strand, 15310468 - 15310398
Alignment:
Q  593 ttctaaagttatttttgagttaaaggct-gtttggcaaaatattgtacaaaactttgaatttattattttt 662  Q
    ||||||| |||||||| ||||||| | | |||||||||||||||||| |||||||||||||| ||||||||    
T  15310468 ttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaatttcttattttt 15310398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 662
Target Start/End: Complemental strand, 15490837 - 15490767
Alignment:
Q  593 ttctaaagttatttttgagttaaaggct-gtttggcaaaatattgtacaaaactttgaatttattattttt 662  Q
    ||||||| |||||||| ||||||| | | |||||||||||||||||| |||||||||||||| ||||||||    
T  15490837 ttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaatttcttattttt 15490767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 670
Target Start/End: Complemental strand, 44655130 - 44655061
Alignment:
Q  601 ttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||| ||| ||| | ||||||||||||| || |||||||||||||||| |||||||||| ||||||    
T  44655130 ttatttttaagtcaaaagttgtttggcaaaattttatacaaaactttgaattaattatttttttgtggtg 44655061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 42984062 - 42984002
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||||||||||| || |||||    
T  42984062 ttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaacatttaattt 42984002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 20665621 - 20665663
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  20665621 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 20665663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 610 - 661
Target Start/End: Complemental strand, 39201574 - 39201524
Alignment:
Q  610 agttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttt 661  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  39201574 agttaaatgttgtttggcaaaatattgtacaaaa-tttgaatttattatttt 39201524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 45139055 - 45139122
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| | |||| ||||||||||||||||||| ||||| ||| || ||||||    
T  45139055 taaagttatttttaagttaaaagttgttcggcaaaatattgtacaaaattttgatttttttttttttt 45139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 596 - 653
Target Start/End: Original strand, 12261474 - 12261532
Alignment:
Q  596 taaagttatttttgagttaaag-gctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    ||||||||||||| |||||||  | |||||| |||||||||||||||||||||||||||    
T  12261474 taaagttatttttaagttaaaaagttgtttgacaaaatattgtacaaaactttgaattt 12261532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 27914979 - 27914929
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    |||||||| |||| ||||||| | |||||||||||||||||||||||||||    
T  27914979 taaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 27961398 - 27961348
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    |||||||| |||| ||||||| | |||||||||||||||||||||||||||    
T  27961398 taaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 623 - 663
Target Start/End: Complemental strand, 1921835 - 1921795
Alignment:
Q  623 ttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  1921835 ttggcaaaatattatacacaactttgaatttattatttttt 1921795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 622 - 670
Target Start/End: Original strand, 33848722 - 33848770
Alignment:
Q  622 tttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||||||||| || |||| | ||||||    
T  33848722 tttggcaaaatattgtacaaaactttgaatttttttttttgttgtggtg 33848770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 9275901 - 9275854
Alignment:
Q  604 tttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaat 651  Q
    ||||| ||||||| | |||||| |||||||||||||||||||||||||    
T  9275901 tttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaat 9275854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 30550984 - 30551026
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  30550984 tgtttgacaaaatattgtacaaa-ctttgaatttattatttttt 30551026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 591 - 653
Target Start/End: Original strand, 40048676 - 40048739
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctg-tttggcaaaatattgtacaaaactttgaattt 653  Q
    |||||||||||||||||| ||||||| | || ||| ||| |||||||| |||||||||||||||    
T  40048676 aattctaaagttatttttaagttaaaagttgtttttgcagaatattgtccaaaactttgaattt 40048739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 44215733 - 44215775
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  44215733 tgtttgacaaaatattgtacaaa-ctttgaatttattatttttt 44215775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 593 - 647
Target Start/End: Original strand, 14449613 - 14449667
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaacttt 647  Q
    ||||||||||||||||  |||||| | |||||  |||||||||||||||||||||    
T  14449613 ttctaaagttatttttatgttaaaagttgtttaacaaaatattgtacaaaacttt 14449667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 27748903 - 27748853
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    ||||||||||||| ||||||| | |||||||||||||||| | ||||||||    
T  27748903 taaagttatttttaagttaaaagttgtttggcaaaatattatgcaaaactt 27748853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 27878035 - 27877985
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    |||||||| |||| ||||||| | |||||| ||||||||||||||||||||    
T  27878035 taaagttagttttaagttaaaagttgtttgacaaaatattgtacaaaactt 27877985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 28018216 - 28018166
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    |||||||| |||| ||||||| | |||||| ||||||||||||||||||||    
T  28018216 taaagttagttttaagttaaaagttgtttgacaaaatattgtacaaaactt 28018166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 642
Target Start/End: Complemental strand, 41904824 - 41904778
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaa 642  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  41904824 taaagctatttttaagttaaatgttgtttggcaaaatattgtacaaa 41904778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 642
Target Start/End: Original strand, 45296790 - 45296836
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaa 642  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  45296790 taaagctatttttaagttaaatgttgtttggcaaaatattgtacaaa 45296836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 658
Target Start/End: Complemental strand, 34325934 - 34325869
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattat 658  Q
    |||||| |||||| || ||||||| | |||||| |||||||||||| |||| ||| ||||||||||    
T  34325934 ttctaaggttattcttaagttaaaagttgtttgacaaaatattgtaaaaaattttaaatttattat 34325869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 3850297 - 3850220
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3850297 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 3850220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 18593612 - 18593689
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18593612 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 18593689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33945825 - 33945902
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33945825 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 33945902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 559799 - 559722
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  559799 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttctggtggtg 559722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 20791618 - 20791541
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20791618 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtg 20791541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 24046562 - 24046639
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  24046562 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatcctttggtggtg 24046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 28472293 - 28472216
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28472293 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 28472216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 32244449 - 32244372
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32244449 ttctacagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 32244372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 6018577 - 6018646
Alignment:
Q  594 tctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||||||||    
T  6018577 tctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttaaatttattatttttt 6018646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 6833622 - 6833553
Alignment:
Q  594 tctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  6833622 tctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 6833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 5414564 - 5414634
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||| |||||    
T  5414564 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttttaatttattaattttt 5414634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 10945781 - 10945711
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||| | ||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  10945781 ttctaaagttatttctaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 10945711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 34207005 - 34207075
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||| |||||||||||||||| |||||||||||||||||||    
T  34207005 ttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaaaattttgaatttattatttttt 34207075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 34247757 - 34247827
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||  ||||||||||||||||||||||||||||||||||||    
T  34247757 ttctaaagttatttttaagttaaaagttgtttgaaaaaatattgtacaaaactttgaatttattatttttt 34247827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 7541177 - 7541107
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||| ||||||||||| || |||||||||||||||    
T  7541177 ttctaaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaacattcaatttattatttttt 7541107  T

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Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 24162864 - 24162794
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||| ||| | |||||||||||||||| ||||||| |||||||||||||||||||    
T  24162864 ttctaaagttatttttaagtaaaaagttgtttggcaaaatattatacaaaattttgaatttattatttttt 24162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 29043279 - 29043209
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||| |||||||||||| || ||||||    
T  29043279 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacataactttgaattttttttttttt 29043209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 173064 - 173134
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| ||||||| | |||||| ||||||||| |||||||||||| ||||||||||||||    
T  173064 ttctaaaattatttttaagttaaaagttgtttgacaaaatattatacaaaactttgtatttattatttttt 173134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 17505558 - 17505488
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||  |||||||| ||||||||||||||||||| |||||||    
T  17505558 ttctaaagttatttttaagttaaaagttgtttgataaaatattatacaaaactttgaatttataatttttt 17505488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 601 - 663
Target Start/End: Complemental strand, 29859473 - 29859411
Alignment:
Q  601 ttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||| ||||||| | |||||| |||||||||||| ||||||||||||||||||||||||    
T  29859473 ttatttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttattatttttt 29859411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 596 - 664
Target Start/End: Original strand, 3053920 - 3053987
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||    
T  3053920 taaagctatttttaagttaaatgttgtttggcaaaatattgtac-aaactttaaatttattattttttg 3053987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 18314074 - 18314008
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| | ||||| | ||| |||||||||||||||| |||||||||||||||||||||||    
T  18314074 taaagttatttttaatttaaatgttgtgtggcaaaatattgtac-aaactttgaatttattatttttt 18314008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 647
Target Start/End: Complemental strand, 19988962 - 19988908
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaacttt 647  Q
    |||||||||||||||| ||||||| | ||| ||||||||||||||||||||||||    
T  19988962 ttctaaagttatttttaagttaaaagttgtgtggcaaaatattgtacaaaacttt 19988908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 247462 - 247420
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  247462 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 247420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 12582487 - 12582529
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  12582487 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 12582529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 596 - 658
Target Start/End: Complemental strand, 8867032 - 8866970
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattat 658  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||  || |||||||||||||||    
T  8867032 taaagctatttttaagttaaaagttgtttggcaaaatattgtatgaagctttgaatttattat 8866970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 620 - 662
Target Start/End: Complemental strand, 29976359 - 29976317
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattattttt 662  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  29976359 tgtttggaaaaatattgtacaaaactttaaatttattattttt 29976317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 596 - 653
Target Start/End: Original strand, 28231080 - 28231136
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    |||||||| |||| ||||||| | |||||||||||||||||| | |||||||||||||    
T  28231080 taaagttacttttaagttaaatgttgtttggcaaaatattgtgc-aaactttgaattt 28231136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 610 - 663
Target Start/End: Complemental strand, 33976056 - 33976004
Alignment:
Q  610 agttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| | |||||| ||||||||| |||||| ||||||||||||||||||||    
T  33976056 agttaaatgttgtttgacaaaatattatacaaa-ctttgaatttattatttttt 33976004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 2475276 - 2475353
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2475276 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 2475353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 6928362 - 6928439
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6928362 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 6928439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 31884667 - 31884744
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31884667 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 31884744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 594 - 670
Target Start/End: Original strand, 24027863 - 24027939
Alignment:
Q  594 tctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24027863 tctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 24027939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 16050776 - 16050853
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16050776 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaaattattattttttggtggtg 16050853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 24759052 - 24758975
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24759052 ttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtg 24758975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 26379284 - 26379207
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26379284 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtg 26379207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 31939837 - 31939914
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31939837 ttctaaagttatttttgagttaaaagcagtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 31939914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 42110758 - 42110681
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42110758 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 42110681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 591 - 670
Target Start/End: Original strand, 3297825 - 3297904
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  3297825 aattctaaagttatttttgagttaaaagctgtttggcaaaataatgtataaaactttgaatttattattttttggtggtg 3297904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 665564 - 665641
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  665564 ttctaaagttatttttgagttaaaagctgttcggcaaaatattatacaaaactttgaatttattattttttggtggtg 665641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 4374859 - 4374936
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4374859 ttctaaagttatttttgagttaaaagttgtttggcaagatattgtacaaaactttgaatttattattttttggtggtg 4374936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 32261717 - 32261794
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  32261717 ttctaaagttatttttgagttaaaagctgtttgataaaatattgtacaaaactttgaatttattattttttggtggtg 32261794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 27176478 - 27176548
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  27176478 ttctaaagttatttttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttattatttttt 27176548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 5589469 - 5589546
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  5589469 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttatcattttttggtggtg 5589546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 666
Target Start/End: Original strand, 39803855 - 39803928
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggt 666  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  39803855 ttctaaagttatttttaagttaaacgttgtttggcaaaatattgtacaaaactttgaatttattattttttggt 39803928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 42322946 - 42322869
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  42322946 ttctaaagttatttttgagttaaaagctgtttcgtaaaatattgtacaaaactttgaatttattattttttgatggtg 42322869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 2530155 - 2530085
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  2530155 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 2530085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 655
Target Start/End: Complemental strand, 25821293 - 25821231
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttat 655  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25821293 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 25821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 40308410 - 40308340
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  40308410 ttctaaagttatttttaagttaaaagctgtttggcaaaatagtgtacaaaactttgaatttattatttttt 40308340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 789028 - 789098
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  789028 ttctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 789098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 28746320 - 28746390
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  28746320 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtataaaactttgaatttattatttttt 28746390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 669
Target Start/End: Complemental strand, 15976552 - 15976476
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 669  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| | || ||||||||||||    
T  15976552 ttctaaaattatttttgagttaaaagctgtttggcaaaatattgtacaaatctttgaatctttttttttttggtggt 15976476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 40506802 - 40506874
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| ||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  40506802 aattcttaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttt 40506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 19270972 - 19270905
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  19270972 taaagctatttttaagttaaaggttgtttggcaaaatattatacaaaactttgaatttattatttttt 19270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 592 - 663
Target Start/End: Complemental strand, 42416871 - 42416800
Alignment:
Q  592 attctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||| ||||||| | |||||  |||||||||||||||||||||||||||||||||||||    
T  42416871 attctaaagttatttttaagttaaaagttgtttcacaaaatattgtacaaaactttgaatttattatttttt 42416800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 10042862 - 10042792
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||| ||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  10042862 ttctgaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttt 10042792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 667
Target Start/End: Complemental strand, 19361720 - 19361646
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtg 667  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||| || ||||||||||    
T  19361720 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgattttttttttttttggtg 19361646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 29383729 - 29383799
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||| |||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||    
T  29383729 ttctatagttatttttgagttaaaagctgtttgacaaaacattgtaaaaaactttgaatttattatttttt 29383799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 667
Target Start/End: Complemental strand, 36083864 - 36083790
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtg 667  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| || |||| |||||    
T  36083864 ttctaaagttatttttaagctaaaagctgtttggcaaaatattgtacaaaactttgaatttttttttttgtggtg 36083790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 36088648 - 36088578
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||| ||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  36088648 ttctaaagttatttttaagtaaaaagctgtttgacaaaatattgttcaaaactttgaatttattatttttt 36088578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 659
Target Start/End: Complemental strand, 43396590 - 43396524
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatt 659  Q
    |||||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||    
T  43396590 ttctaaagttatttttaagttagaagttgtttggcaaaatattgtacaaaactttgaatttattatt 43396524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 659
Target Start/End: Original strand, 42111814 - 42111877
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatt 659  Q
    |||||||||| || ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  42111814 taaagttattgttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatt 42111877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 790063 - 790133
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||  |||||||||||||||||| |||||||||||||||||    
T  790063 ttctaaagttatttttaagttaaaagttgtttgaaaaaatattgtacaaaactatgaatttattatttttt 790133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 3246899 - 3246829
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||| | | ||||||||||||||||||||||||| || |||||||||||||||    
T  3246899 ttctaaagttatttttaagttacaagttgtttggcaaaatattgtacaaaacattaaatttattatttttt 3246829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 8314899 - 8314829
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| ||||||| | ||||| |||||||||| |||||||||||||||||||||||||||    
T  8314899 ttctaaaattatttttaagttaaaagttgttttgcaaaatattatacaaaactttgaatttattatttttt 8314829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 29874670 - 29874740
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||| |||||||||| ||||||| | |||||| ||||||||| |||||||||||||||||||||||||||    
T  29874670 ttctatagttatttttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttattatttttt 29874740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 37147137 - 37147067
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||| |||||| || ||||||    
T  37147137 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttcgaattttttttttttt 37147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 591 - 670
Target Start/End: Original strand, 28990938 - 28991018
Alignment:
Q  591 aattctaaagttatttttgagttaaag-gctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||| ||||| ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  28990938 aattttaaagctattttttagttaaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttatgatggtg 28991018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 7536715 - 7536645
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||| ||||||||||||||||||| |||||||| || ||||||    
T  7536715 ttctaaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaacattgaattttttttttttt 7536645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 31958390 - 31958463
Alignment:
Q  597 aaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttatta-ttttttggtggtg 670  Q
    |||||||||||| ||||||| | |||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  31958390 aaagttatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatttattacttttttggtggtg 31958463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 29382578 - 29382649
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaa-ctttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||| ||||||||  ||| |||||||||||||||    
T  29382578 ttctaaagttatttttaagttaaaagttgtttggcaaaatatagtacaaaatttttaaatttattatttttt 29382649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 30503534 - 30503604
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| |||||||   | ||| |||||||||||||||||| ||| |||||||||||||||    
T  30503534 ttctaaagttatttttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttattatttttt 30503604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 30543877 - 30543947
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| |||||||   | ||| |||||||||||||||||| ||| |||||||||||||||    
T  30543877 ttctaaagttatttttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttattatttttt 30543947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 16166294 - 16166354
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    ||||||| |||||||| ||||||| | | |||| |||||||||||||||||||||||||||    
T  16166294 ttctaaaattatttttaagttaaaagttatttgacaaaatattgtacaaaactttgaattt 16166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 599 - 662
Target Start/End: Complemental strand, 1060768 - 1060706
Alignment:
Q  599 agttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttt 662  Q
    |||||||||| |||||||   |||||| ||||||||||||| ||||||||||||||||||||||    
T  1060768 agttatttttaagttaaaaattgtttgacaaaatattgtac-aaactttgaatttattattttt 1060706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 591 - 646
Target Start/End: Original strand, 15875751 - 15875806
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    |||| ||||||||||||| ||||||| | ||||| |||||||||||||||||||||    
T  15875751 aattttaaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaactt 15875806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 652
Target Start/End: Original strand, 35380507 - 35380566
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatt 652  Q
    ||||||||||| |||| ||||||| | |||||||||||||||| |||||||| |||||||    
T  35380507 ttctaaagttaattttaagttaaaagttgtttggcaaaatattatacaaaacattgaatt 35380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 37461914 - 37461872
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  37461914 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 37461872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 620 - 658
Target Start/End: Complemental strand, 14720223 - 14720185
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattat 658  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  14720223 tgtttgggaaaatattgtacaaaactttgaatttattat 14720185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 596 - 661
Target Start/End: Original strand, 3213236 - 3213300
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttt 661  Q
    ||||| ||||||  ||||||| | |||||| ||||||||||||| |||||||||||||||||||||    
T  3213236 taaagctattttaaagttaaatgttgtttgacaaaatattgtac-aaactttgaatttattatttt 3213300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 39783024 - 39782952
Alignment:
Q  597 aaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttatta-ttttttggtggt 669  Q
    |||||||||||| ||||||| | ||||||||||||||||||| | |||||| || |||||| ||||||||||||    
T  39783024 aaagttatttttcagttaaaagttgtttggcaaaatattgta-acaactttaaacttattacttttttggtggt 39782952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 18041190 - 18041256
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||| ||||||| ||||||| | ||||| |||||||||| |||||| |||| |||||||||||||||    
T  18041190 taaagctatttttaagttaaatgttgtttcgcaaaatattttacaaa-ctttaaatttattatttttt 18041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 620 - 670
Target Start/End: Complemental strand, 28887228 - 28887177
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaa-tttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||||| || ||||||||||| || |||||    
T  28887228 tgtttggcaaaatattgtacaaaactttaaattttattattttatgatggtg 28887177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 2001556 - 2001506
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    ||||||||||||| ||||||| | ||||||| |||||| ||||||||||||    
T  2001556 taaagttatttttaagttaaaagttgtttggtaaaatactgtacaaaactt 2001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 621 - 667
Target Start/End: Complemental strand, 2463683 - 2463637
Alignment:
Q  621 gtttggcaaaatattgtacaaaactttgaatttattattttttggtg 667  Q
    ||||| ||||||||||||||||||||||||||| || |||| |||||    
T  2463683 gtttgacaaaatattgtacaaaactttgaatttttttttttgtggtg 2463637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 593 - 643
Target Start/End: Complemental strand, 14205483 - 14205433
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaa 643  Q
    |||||||||||||||| | ||||| | |||||||||||||||| |||||||    
T  14205483 ttctaaagttatttttaatttaaaagttgtttggcaaaatattatacaaaa 14205433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 29500405 - 29500328
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29500405 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 29500328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 30269086 - 30269163
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30269086 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 30269163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 45599269 - 45599346
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45599269 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 45599346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 54510389 - 54510466
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54510389 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 54510466  T

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Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 4018989 - 4018912
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4018989 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtg 4018912  T

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Target: chr3; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 14587389 - 14587466
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14587389 ttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 14587466  T

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Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 591 - 670
Target Start/End: Complemental strand, 2909507 - 2909428
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  2909507 aattctaaagttatttttgagttaaaagctgtttgacaaaatattatacaaaactttgaatttattattttttggtggtg 2909428  T

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Target: chr3; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 591 - 670
Target Start/End: Complemental strand, 29450734 - 29450655
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29450734 aattctaaagttatttttgggttaaaagctgtttagcaaaatattgtacaaaactttgaatttattattttttggtggtg 29450655  T

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Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7040954 - 7040877
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7040954 ttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtg 7040877  T

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Target: chr3; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 13450345 - 13450268
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13450345 ttctaaaattatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtg 13450268  T

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Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 20849406 - 20849483
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20849406 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtg 20849483  T

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Target: chr3; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33932488 - 33932565
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  33932488 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtataaaactttgaatttattattttttggtggtg 33932565  T

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Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 36592218 - 36592295
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36592218 ttctaaagttatttttgagttaaaaactgtttgtcaaaatattgtacaaaactttgaatttattattttttggtggtg 36592295  T

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Target: chr3; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 48545182 - 48545105
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  48545182 ttctaaagttatttttgagttaaaagctgtttgacaaaatatcgtacaaaactttgaatttattattttttggtggtg 48545105  T

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Target: chr3; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 52461100 - 52461023
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  52461100 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttataattttttcgtggtg 52461023  T

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Target: chr3; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 54741876 - 54741799
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  54741876 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaattttaaatttattattttttggtggtg 54741799  T

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Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 595 - 670
Target Start/End: Complemental strand, 52674853 - 52674779
Alignment:
Q  595 ctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52674853 ctaaagttatttttgagttaaaa-ctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 52674779  T

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Target: chr3; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 22347081 - 22347159
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaa-tattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  22347081 ttctaaagttatttttgagttaaaagctgtttagcaaaaatattgtacaaaactttgaatttattattttttggtggtg 22347159  T

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Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 53022739 - 53022669
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  53022739 ttctaaagttatttttgagttaaaagctgtttggcgaaatattgtacaaaactttgaatttattatttttt 53022669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 12101466 - 12101543
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12101466 ttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtg 12101543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 26881694 - 26881617
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  26881694 ttctaaagttatttttgagttaaaaactgtttggcaaaatattttacaaaactttgaatttattatttttttgtggtg 26881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 43316518 - 43316595
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43316518 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtg 43316595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 46757631 - 46757555
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  46757631 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgta-taaactttgaatttattattttttggtggtg 46757555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 39721332 - 39721262
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  39721332 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 39721262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7265128 - 7265051
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  7265128 ttctaaagttatttttgagttaaaagcagtttgacaaattattgtacaaaactttgaatttattatttttttgtggtg 7265051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 19536780 - 19536703
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  19536780 ttctaaagttatttttgaattaaaagttgtttggcaaaatattgtataaaactttgaatttattattttttgctggtg 19536703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 44762723 - 44762795
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||    
T  44762723 aattctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatatttt 44762795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 591 - 663
Target Start/End: Complemental strand, 47719559 - 47719487
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  47719559 aattctaaagttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 47719487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 46090123 - 46090190
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  46090123 taaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 46090190  T

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Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 35690214 - 35690284
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  35690214 ttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttt 35690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 38361823 - 38361753
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  38361823 ttctaaagttatttttaagttaaaagttgtttggcagaatattgtacaaaactttgaatttattatttttt 38361753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 50739227 - 50739157
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  50739227 ttctaaagttatttttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttattatttttt 50739157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 50773628 - 50773698
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  50773628 ttctaaagttatttttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttattatttttt 50773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 13337171 - 13337095
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  13337171 ttctaaagttatttttaagttaaagt-tgtttggcaaaatatcgtacaaaactttgaatttattatttttttgtggtg 13337095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 36987738 - 36987810
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| || ||||||    
T  36987738 aattctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 36987810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 37013177 - 37013249
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| || ||||||    
T  37013177 aattctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 37013249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 41990766 - 41990836
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||| ||||||| |||||||||||||||    
T  41990766 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtaccaaactttaaatttattatttttt 41990836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 48961192 - 48961122
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| ||||||||| |||||||||||||||||||||||||||    
T  48961192 ttctaaagttatttttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttattatttttt 48961122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 670
Target Start/End: Complemental strand, 37413639 - 37413564
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttt-ttggtggtg 670  Q
    ||||||||||||| ||||| | | |||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  37413639 taaagttatttttaagttacaagttgtttggcaaaatattgtacaaaattttgaatttattattttcttggtggtg 37413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 42187754 - 42187821
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||||||||    
T  42187754 taaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttaaaatttattatttttt 42187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 46850716 - 46850783
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  46850716 taaagctatttttaagttaaaagttgtttggcaaaatattgtacaaacctttgaatttattatttttt 46850783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 54113482 - 54113415
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| | |||||| ||||||||||||||||||||| |||||||||||||||    
T  54113482 taaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttattatttttt 54113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 54203748 - 54203818
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||||||| || |||||||||||||||    
T  54203748 ttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaacattaaatttattatttttt 54203818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 50933274 - 50933207
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||    
T  50933274 taaagttatttttaagttaaaagctgtttaacaaaatattgtacaaaaatttaaatttattatttttt 50933207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 12996818 - 12996891
Alignment:
Q  597 aaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttatta-ttttttggtggtg 670  Q
    |||||||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  12996818 aaagttatttttaagttaaaagttgtttggaaaaatattgtac-aaactttgaatttattacttttttggtggtg 12996891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 593 - 662
Target Start/End: Original strand, 15496472 - 15496541
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttt 662  Q
    |||||||||||||||| || || | | |||||||||||||||||||||||||||||||||| || |||||    
T  15496472 ttctaaagttatttttaagctataagttgtttggcaaaatattgtacaaaactttgaatttttttttttt 15496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 618 - 656
Target Start/End: Complemental strand, 875878 - 875840
Alignment:
Q  618 gctgtttggcaaaatattgtacaaaactttgaatttatt 656  Q
    |||||||||||||||||||||||||||||||||||||||    
T  875878 gctgtttggcaaaatattgtacaaaactttgaatttatt 875840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 20996336 - 20996406
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| | ||||| | |||||| ||||||||||||||||| ||||||||| || ||||||    
T  20996336 ttctaaagttatttttaaattaaaagttgtttgtcaaaatattgtacaaaattttgaattttttttttttt 20996406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 35906686 - 35906756
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| | ||||| | || ||| |||||||||||||||||||||||||| ||||||||||    
T  35906686 ttctaaaattatttttaaattaaaagttggttgacaaaatattgtacaaaactttgaattgattatttttt 35906756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 46088722 - 46088782
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    |||||||||||||||| ||| ||| | ||||||| |||||||||||||||||||| |||||    
T  46088722 ttctaaagttatttttaagtgaaaagttgtttggaaaaatattgtacaaaacttttaattt 46088782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 596 - 651
Target Start/End: Complemental strand, 33899897 - 33899842
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaat 651  Q
    ||||||||||||| ||||||| | |||||||||||||||| ||| |||||||||||    
T  33899897 taaagttatttttaagttaaaagttgtttggcaaaatattttacgaaactttgaat 33899842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 44075414 - 44075456
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  44075414 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 44075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 596 - 642
Target Start/End: Complemental strand, 8238967 - 8238921
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaa 642  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||||    
T  8238967 taaagttatttttaagttaaatgttgtttggcaaaatattgtacaaa 8238921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 663
Target Start/End: Original strand, 54195692 - 54195754
Alignment:
Q  601 ttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||| |||||||   | |||| ||||||||||||||||| |||||||||||||||||||    
T  54195692 ttatttttaagttaaaaattatttgacaaaatattgtacaaaattttgaatttattatttttt 54195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 647
Target Start/End: Complemental strand, 10617684 - 10617639
Alignment:
Q  602 tatttttgagttaaaggctgtttggcaaaatattgtacaaaacttt 647  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||    
T  10617684 tatttttaagttaaaagttgtttggcaaaatattgtacaaaacttt 10617639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 663
Target Start/End: Complemental strand, 54835790 - 54835729
Alignment:
Q  602 tatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| ||||||| | |||||||||||||||||||||||| ||||| ||| || ||||||    
T  54835790 tatttttaagttaaaagttgtttggcaaaatattgtacaaaattttgatttttttttttttt 54835729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 627 - 663
Target Start/End: Original strand, 34433767 - 34433803
Alignment:
Q  627 caaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34433767 caaaatattgtacaaaacttttaatttattatttttt 34433803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 625 - 663
Target Start/End: Complemental strand, 916315 - 916278
Alignment:
Q  625 ggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  916315 ggcaaaatattgtacaaa-ctttgaatttattatttttt 916278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 53292623 - 53292684
Alignment:
Q  136 tcttggtctttaagctcaaaaacctacaaaaattgaagggaaataggtaaaatgagcttaact 198  Q
    |||||||| |||||||||||||| |||| || ||||||||||||| ||||||  |||||||||    
T  53292623 tcttggtcattaagctcaaaaacttacataa-ttgaagggaaatatgtaaaagtagcttaact 53292684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 628 - 664
Target Start/End: Original strand, 42617780 - 42617816
Alignment:
Q  628 aaaatattgtacaaaactttgaatttattattttttg 664  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  42617780 aaaatattgtacaaaaatttaaatttattattttttg 42617816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 971026 - 970949
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  971026 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 970949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 1835758 - 1835681
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1835758 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 1835681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 5166339 - 5166262
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5166339 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 5166262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7233096 - 7233019
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7233096 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 7233019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 8878192 - 8878115
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8878192 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 8878115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 24926087 - 24926164
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24926087 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 24926164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 31972355 - 31972278
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31972355 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 31972278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 593 - 669
Target Start/End: Original strand, 18166835 - 18166911
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 669  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18166835 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 18166911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 591 - 670
Target Start/End: Complemental strand, 4631283 - 4631204
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4631283 aattctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtg 4631204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7274743 - 7274666
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7274743 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtg 7274666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 8683732 - 8683655
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8683732 ttctaaagttatttttgagttaaaagctgtttggcaaaaaattgtacaaaactttgaatttattattttttggtggtg 8683655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 36085949 - 36086026
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36085949 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattactttttggtggtg 36086026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 3324266 - 3324343
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  3324266 ttctaaagttatttttgagttaaaagctgtttcgcaaaatattatacaaaactttgaatttattattttttggtggtg 3324343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 591 - 663
Target Start/End: Complemental strand, 34912726 - 34912654
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  34912726 aattctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 34912654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 3243297 - 3243367
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  3243297 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 3243367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 36078558 - 36078628
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  36078558 ttctaaagttatttttaagttaaaaggtgtttgacaaaatattgtacaaaactttgaatttattatttttt 36078628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 38879209 - 38879139
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  38879209 ttctaaagttatttttaagttaaaagttgtttggcaaaatattttacaaaactttgaatttattatttttt 38879139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 668296 - 668373
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||| | ||||| | ||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  668296 ttctaaagttatttttaaattaaaagttgtttggcaaaatattgcacaaaattttgaatttattattttttggtggtg 668373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 3079790 - 3079720
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||    
T  3079790 ttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttattatttttt 3079720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 10120682 - 10120612
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| ||||||||||||||||||||| |||||||||||||||    
T  10120682 ttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttattatttttt 10120612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 40202288 - 40202218
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||||||||||||| |||||||||||||||    
T  40202288 ttctaaagttatttttaagttaaaagttgttaggcaaaatattgtacaaaactttaaatttattatttttt 40202218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 591 - 670
Target Start/End: Original strand, 9799325 - 9799404
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||| ||||||| ||||| ||||||| | |||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  9799325 aattttaaagttgtttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttattattttttagtggtg 9799404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 596 - 670
Target Start/End: Original strand, 17032818 - 17032892
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||||| |||||| || |||||| ||||||    
T  17032818 taaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacttggaattttttttttttttgtggtg 17032892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 35423859 - 35423789
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||| ||||||||||| ||||||| | ||||||||||||| |||||||||||||| |||||||||||||||    
T  35423859 ttcttaagttatttttaagttaaaagttgtttggcaaaatgttgtacaaaactttaaatttattatttttt 35423789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 41452888 - 41452818
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||| || ||||||    
T  41452888 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttaaattttttttttttt 41452818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 45474795 - 45474725
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||| || ||||||    
T  45474795 ttctaaatttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 45474725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 591 - 653
Target Start/End: Complemental strand, 38709770 - 38709708
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    |||| ||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||    
T  38709770 aattataaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaattt 38709708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 1118053 - 1117981
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtaca--aaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| ||||||||||||||   ||||||||||||||||||||||    
T  1118053 ttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacatgtaactttgaatttattatttttt 1117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 593 - 637
Target Start/End: Original strand, 20313250 - 20313294
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgt 637  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20313250 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgt 20313294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 2180091 - 2180021
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||| |||||||||| ||||||||||||| ||| || ||||||    
T  2180091 ttctaaagttatttttaagttaaaagttgttttgcaaaatattatacaaaactttgatttttttttttttt 2180021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 620 - 670
Target Start/End: Original strand, 17051167 - 17051217
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  17051167 tgtttggcaaaatattgtacaaaacatagaatttattatttttttgtggtg 17051217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Complemental strand, 3708496 - 3708454
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  3708496 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 3708454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 11868920 - 11868962
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  11868920 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 11868962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 663
Target Start/End: Original strand, 35360313 - 35360355
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  35360313 tgtttggcaaaatattgtac-aaactttgaatttattatttttt 35360355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 656
Target Start/End: Complemental strand, 37522763 - 37522706
Alignment:
Q  599 agttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttatt 656  Q
    |||||||||| |||||||   ||||||||||||| |||||||||| ||||| ||||||    
T  37522763 agttatttttaagttaaaatttgtttggcaaaatgttgtacaaaattttgattttatt 37522706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 634
Target Start/End: Original strand, 38959646 - 38959687
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatat 634  Q
    ||||||| |||||||||||||||| |||||||| ||||||||    
T  38959646 ttctaaaattatttttgagttaaaagctgtttgacaaaatat 38959687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 11583229 - 11583152
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11583229 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 11583152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 17585588 - 17585511
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17585588 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 17585511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 25659812 - 25659889
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25659812 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 25659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33373822 - 33373899
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33373822 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 33373899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 33642683 - 33642606
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33642683 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 33642606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33895219 - 33895296
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33895219 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 33895296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 39327045 - 39327122
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39327045 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 39327122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 43120781 - 43120858
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43120781 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 43120858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 45104253 - 45104176
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45104253 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 45104176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 47037133 - 47037208
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtgg 668  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47037133 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtgg 47037208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 596 - 670
Target Start/End: Original strand, 40432208 - 40432282
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40432208 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 40432282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 3265189 - 3265112
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3265189 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtataaaactttgaatttattattttttggtggtg 3265112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7833618 - 7833541
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7833618 ttctaaagttatttttgagttaaaaactgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 7833541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 9574934 - 9574857
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9574934 ttctaaagttatttttgagttaaaagctgttcggcaaaatattgtacaaaactttgaatttattattttttggtggtg 9574857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 11754230 - 11754307
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11754230 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtg 11754307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33818096 - 33818173
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33818096 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtg 33818173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33831927 - 33832004
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33831927 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttattattttttggtggtg 33832004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33877564 - 33877641
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33877564 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtg 33877641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 33894089 - 33894166
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33894089 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttattattttttggtggtg 33894166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 36165523 - 36165600
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36165523 ttctaaagttatttttgagttaaaagctttttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 36165600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 38802378 - 38802301
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38802378 ttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtg 38802301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 666
Target Start/End: Original strand, 41901702 - 41901775
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggt 666  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41901702 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggt 41901775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 593 - 669
Target Start/End: Original strand, 14487326 - 14487402
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 669  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14487326 ttctaaagttatttttgagttaaaagctgtttggaaaaatattgtacaaaactttgaatttattattttttggtggt 14487402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 46588093 - 46588170
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  46588093 ttctaaagttatttttgagttaaaagctgtttggcaaaatattatataaaactttgaatttattattttttggtggtg 46588170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 24473553 - 24473623
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  24473553 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 24473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 43119116 - 43119186
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  43119116 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 43119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 17249108 - 17249038
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  17249108 ttctaaagttatttttaagctaaaagctgtttggcaaaatattgtacaaaactttgattttattatttttt 17249038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 36952715 - 36952785
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  36952715 ttctaaatttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 36952785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 43123111 - 43123042
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  43123111 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaattt-ttatttttt 43123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 46040491 - 46040558
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  46040491 taaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaattttgaatttattatttttt 46040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 39879142 - 39879212
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||||||||||||| |||||||| ||||||||||||||||||    
T  39879142 ttctaaagttatttttaagttaaaagttgtttggcaaaatattttacaaaacattgaatttattatttttt 39879212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 591 - 663
Target Start/End: Complemental strand, 34078357 - 34078285
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||| || ||||||    
T  34078357 aattctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 34078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 1322527 - 1322597
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| | ||||| | ||||||| ||||||||||||||||| ||||||||||||||||||    
T  1322527 ttctaaagttatttttaaattaaaagttgtttggtaaaatattgtacaaaacattgaatttattatttttt 1322597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 593 - 650
Target Start/End: Complemental strand, 16097415 - 16097358
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaa 650  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16097415 ttctaaaattatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaa 16097358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 31638425 - 31638494
Alignment:
Q  601 ttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||| ||||||| | |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  31638425 ttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaattaattatttttttgtggtg 31638494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 599 - 663
Target Start/End: Complemental strand, 34652341 - 34652277
Alignment:
Q  599 agttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||| ||||||| | |||||| ||||||||||||||||| |||||||||||||||||||    
T  34652341 agttatttttaagttaaaagttgtttgacaaaatattgtacaaaattttgaatttattatttttt 34652277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 18091343 - 18091277
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||| |||||||||||||||||||||||    
T  18091343 taaagctatttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaatttattatttttt 18091277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 591 - 649
Target Start/End: Original strand, 17366353 - 17366411
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttga 649  Q
    |||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||    
T  17366353 aattctaaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaactttga 17366411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 23730301 - 23730374
Alignment:
Q  597 aaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttatt-attttttggtggtg 670  Q
    |||||||||||| ||||||| | |||||||||||||||||||| |||||||||| |||||  |||||||||||||    
T  23730301 aaagttatttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaaattattgcttttttggtggtg 23730374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 591 - 649
Target Start/End: Original strand, 39729204 - 39729262
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttga 649  Q
    |||||||||||||||||| ||||||| | |||||  |||||||||||||||||||||||    
T  39729204 aattctaaagttatttttaagttaaaagttgtttcacaaaatattgtacaaaactttga 39729262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 7308333 - 7308404
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaa-ctttgaatttattatttttt 663  Q
    |||||| ||||||||| ||||||| | ||||||||||||||||||||||||  ||||||||| || ||||||    
T  7308333 ttctaatgttatttttaagttaaaagttgtttggcaaaatattgtacaaaatttttgaattttttttttttt 7308404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 591 - 670
Target Start/End: Complemental strand, 33932990 - 33932912
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||| | ||||| | |||||||||||||||  ||||||||||| ||||| || |||||| ||||||    
T  33932990 aattctaaagttatttttaaattaaaagttgtttggcaaaatatcatacaaaacttt-aattttttttttttttgtggtg 33932912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 620 - 658
Target Start/End: Original strand, 11606496 - 11606534
Alignment:
Q  620 tgtttggcaaaatattgtacaaaactttgaatttattat 658  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  11606496 tgtttggcaaaatattgtacaaaactttaaatttattat 11606534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 593 - 634
Target Start/End: Original strand, 31215866 - 31215907
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatat 634  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  31215866 ttctaaagttatttttgagttaaaagttgtttggcaaaatat 31215907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 593 - 634
Target Start/End: Original strand, 31221621 - 31221662
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatat 634  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  31221621 ttctaaagttatttttgagttaaaagttgtttggcaaaatat 31221662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 595 - 663
Target Start/End: Complemental strand, 43124424 - 43124356
Alignment:
Q  595 ctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||| ||||||||| |||||||   |||||||||||||||| || |||| ||||||||| |||||||||    
T  43124424 ctaaggttatttttaagttaaaatttgtttggcaaaatattatataaaaatttgaattttttatttttt 43124356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 591 - 642
Target Start/End: Complemental strand, 17670060 - 17670009
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaa 642  Q
    |||| |||||||| |||| ||||||| | |||||||||||||||||||||||    
T  17670060 aattttaaagttacttttaagttaaatgttgtttggcaaaatattgtacaaa 17670009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 642
Target Start/End: Original strand, 28568759 - 28568805
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaa 642  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  28568759 taaagatatttttaagttaaatgttgtttggcaaaatattgtacaaa 28568805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 591 - 653
Target Start/End: Complemental strand, 49223224 - 49223163
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    |||| ||||| ||||||| ||||||| | |||||| ||||||||||||| |||||||||||||    
T  49223224 aattttaaagctatttttaagttaaatgttgtttgacaaaatattgtac-aaactttgaattt 49223163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Original strand, 4514 - 4591
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4514 ttctaaagttatttttgagttaaaagctgtttggccaaatattgtacaaaactttgaatttattattttttggtggtg 4591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 7520 - 7443
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7520 ttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaacttagaatttattattttttggtggtg 7443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 593 - 670
Target Start/End: Complemental strand, 1546 - 1469
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtg 670  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1546 ttctaaagttatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtg 1469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 90461 - 90533
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  90461 aattctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttt 90533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 593 - 664
Target Start/End: Original strand, 110529 - 110600
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattattttttg 664  Q
    |||||||||||||||| ||||||| | ||||| |||||||||||||  ||||||||| ||| || |||||||    
T  110529 ttctaaagttatttttaagttaaaagttgtttagcaaaatattgtaagaaactttgattttttttttttttg 110600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 7294 - 7364
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  7294 ttctaaagttatttttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttattatttttt 7364  T

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Target: scaffold0198 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 15263 - 15333
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  15263 ttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 15333  T

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Target: scaffold0244 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 7576 - 7646
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  7576 ttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttt 7646  T

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Target: scaffold0768 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 6306 - 6375
Alignment:
Q  594 tctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  6306 tctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 6375  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 138029 - 138101
Alignment:
Q  591 aattctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||||| ||||||| | ||||| ||||||||||| |||| ||||||||||| || ||||||    
T  138029 aattctaaagttatttttaagttaaaagttgtttagcaaaatattgcacaagactttgaattttttttttttt 138101  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 132728 - 132659
Alignment:
Q  593 ttctaaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaatttattatttttt 663  Q
    |||||||||||||||| | ||||| | |||||||||||||||||||  ||||||| |||||||||| ||||    
T  132728 ttctaaagttatttttaatttaaaagttgtttggcaaaatattgta-taaactttcaatttattatctttt 132659  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 229151 - 229101
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    ||||||||||||| ||||||| | ||||||| |||||||||||||||||||    
T  229151 taaagttatttttaagttaaaagttgtttggtaaaatattgtacaaaactt 229101  T

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Target: scaffold0318 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 1122 - 1072
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactt 646  Q
    ||||||||||||| ||||||| | |||||||||||||||| | ||||||||    
T  1122 taaagttatttttaagttaaaagttgtttggcaaaatatttttcaaaactt 1072  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 596 - 653
Target Start/End: Original strand, 31577 - 31633
Alignment:
Q  596 taaagttatttttgagttaaaggctgtttggcaaaatattgtacaaaactttgaattt 653  Q
    |||||||| |||| ||||||| | |||||||||||||||||| | |||||||||||||    
T  31577 taaagttacttttaagttaaatgttgtttggcaaaatattgtgc-aaactttgaattt 31633  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 596 - 651
Target Start/End: Original strand, 5737 - 5793
Alignment:
Q  596 taaagttattt-ttgagttaaaggctgtttggcaaaatattgtacaaaactttgaat 651  Q
    ||||||||||| || ||||||| | |||||| ||| |||||||||||||||||||||    
T  5737 taaagttatttattaagttaaaagttgtttgacaagatattgtacaaaactttgaat 5793  T

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