View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5950_high_12 (Length: 266)
Name: NF5950_high_12
Description: NF5950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5950_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 8921112 - 8921368
Alignment:
| Q |
1 |
cattacaccttgctgaattaaaggtaatgtatccctaatgacaagtataattcaattcttaaacgaatgagatagtgatcacaagtactctaaaatctct |
100 |
Q |
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| T |
8921112 |
cattacaccttgatgaattaaaggtaatgtatctctaatgacaagtataattcaattcttaaacgaatgagatagtgatcacaagtactctaaaatctct |
8921211 |
T |
|
| Q |
101 |
cggttaactatttaattacctccactaattatctctctccacttcaagagacacaatctggcgcaggcactatagaaagcaacactgcatgtgagtaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8921212 |
cggttaactatttaattacctccactaattatctctctccacttcatgagacacaatctggcgcaggcactatagaaagcaacactgcatgtgagtaaag |
8921311 |
T |
|
| Q |
201 |
acctaaagttgaatgaatctaatccccgtc-aactctacatgccccatacacctttg |
256 |
Q |
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|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
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| T |
8921312 |
acctaaagttgaatgaatctaatccccgtcaaactctgcatgccccatacacctttg |
8921368 |
T |
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