View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5951_low_18 (Length: 328)
Name: NF5951_low_18
Description: NF5951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5951_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 317
Target Start/End: Complemental strand, 10341324 - 10341027
Alignment:
| Q |
19 |
agacaatctggcccacccaagtggtgcaggtttggtcacccttttggaccataccagaactacttccttagctttgttgatttattaaaaccatcatgaa |
118 |
Q |
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| T |
10341324 |
agacaatctggcccacccaattggtgcaggtttggtcacccttttggactataccagaactacttccttagctttgttgatttattaaa-ccatcatgaa |
10341226 |
T |
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| Q |
119 |
accctcaatcattgaaagaaacaactctttgtaaccaccatcactccnnnnnnngttgcttatatgactaaatacctaacatctaatgaaaatgacaaat |
218 |
Q |
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| T |
10341225 |
accctcaatcattgaaagaaacaactctttgtaaccaccatcactcctttttttgttgcttatatgactaaatacctaacatctaatgaaaatgacaaat |
10341126 |
T |
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| Q |
219 |
gtcaagggtgatataattatgttcctttatatatggaatataactcttaaagtgacttttatcatataatcatcatactttgcttcttcacttcttcat |
317 |
Q |
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| T |
10341125 |
gtcaagggtgatataattatgttcctttatatatggaatataactcttaaagtgacttttatcatataatcatcatactttgcttcttcacttcttcat |
10341027 |
T |
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