View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5951_low_33 (Length: 238)
Name: NF5951_low_33
Description: NF5951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5951_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 10506039 - 10506245
Alignment:
| Q |
16 |
agagaaacatagaagagaatgagaatgagactatgtccaattttgattatacataacaataacatagtcaaaacaaaatggaaacaaagaaagaatcatt |
115 |
Q |
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| T |
10506039 |
agagaaacatagaagagaatgagaatgagactatgtccaattttgtttatacataacaataacatagtcaaaacaaaatggaaacaaagaaagaatcatt |
10506138 |
T |
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| Q |
116 |
tggtttgagaagtgcaacgtgaaggaatataactaccattaagaggatgaaatttaagttggcactcaagtttacacccgaatttaaaagaaccaaacgg |
215 |
Q |
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| T |
10506139 |
tggattgagaagtgcaacgtgaaggaatataactaccattaagaggatgaaatttaagttgacactcaagtttacacccgaatttaaaagaaccaaacgg |
10506238 |
T |
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| Q |
216 |
tccaatt |
222 |
Q |
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||||||| |
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| T |
10506239 |
tccaatt |
10506245 |
T |
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