View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5951_low_36 (Length: 230)
Name: NF5951_low_36
Description: NF5951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5951_low_36 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 214
Target Start/End: Complemental strand, 4557461 - 4557260
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4557461 |
ttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
4557362 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4557361 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
4557262 |
T |
|
| Q |
213 |
tg |
214 |
Q |
| |
|
|| |
|
|
| T |
4557261 |
tg |
4557260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 4613506 - 4613715
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |
|
|
| T |
4613506 |
aaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccatttttcg |
4613605 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4613606 |
cggatcagccagcaaactgcagatatatatgcaatgaatgggaaattgggatggaaattgacaccaatgtgaagagagatgaggtagagaagctggtcaa |
4613705 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4613706 |
tgaattgatg |
4613715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 214
Target Start/End: Complemental strand, 4571308 - 4571107
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||||||||| | ||||||||||| ||||||| ||||||||| || |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4571308 |
ttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtgttagccattttttgctgatcag |
4571209 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
212 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||| || ||||| || || |||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
4571208 |
ccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattga |
4571109 |
T |
|
| Q |
213 |
tg |
214 |
Q |
| |
|
|| |
|
|
| T |
4571108 |
tg |
4571107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 4585980 - 4585771
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |
|
|
| T |
4585980 |
aaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattcattg |
4585881 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
4585880 |
ctgatcagccaacaaactgtagaattatttgcaatgaatgggagattgggatggaagttgacaccaatgtgaagagagaggaggtggagaagttggtcaa |
4585781 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4585780 |
tgaattgatg |
4585771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 4579776 - 4579567
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4579776 |
aaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttccaatgttgtgttggccatttttcg |
4579677 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
||||||| |||| || |||||||||| | |||||||||||| | ||||| || ||||| ||||| |||||||||||||| ||||| ||||| |||| || |
|
|
| T |
4579676 |
ctgatcacccagtaagctgcagatatttatgcaatacatggaaaattggaattgaaatcgacactaatgtgaagagagaggaggtggagaagctggttaa |
4579577 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4579576 |
tgaattgatg |
4579567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 4574652 - 4574442
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||| | ||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
4574652 |
aaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccattttttt |
4574553 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||||||||||| | |||||| || || ||||| ||||| || ||||| ||||| ||||||| |
|
|
| T |
4574552 |
cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaa |
4574453 |
T |
|
| Q |
205 |
tgaattgatgt |
215 |
Q |
| |
|
||||||||||| |
|
|
| T |
4574452 |
tgaattgatgt |
4574442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 4560831 - 4560640
Alignment:
| Q |
24 |
gattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactg |
123 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4560831 |
gattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactg |
4560732 |
T |
|
| Q |
124 |
cagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattgatgt |
215 |
Q |
| |
|
||||||||||||||| |||| ||||||| | |||||||| || ||||| ||||| || || || ||||| |||||||||||||||||| |
|
|
| T |
4560731 |
aagatatatttgcaatgaatggaagattggaaacgaaattgatacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatgt |
4560640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 4564055 - 4563845
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
4564055 |
aaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattctttg |
4563956 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| |||| |||||||||||| |||||||| || || ||||| |||||||| ||||| ||||| | ||||| |
|
|
| T |
4563955 |
gtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaatcgatacgaatgtaaagagagaagaggtggagaaacttgtcaa |
4563856 |
T |
|
| Q |
205 |
tgaattgatgt |
215 |
Q |
| |
|
||||||||||| |
|
|
| T |
4563855 |
tgaattgatgt |
4563845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 4461467 - 4461258
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| || ||||||||||||||||| |||| |
|
|
| T |
4461467 |
aaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggccattctttg |
4461368 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| | |||||||||||| | ||||| || | |||||||||| |||||||| ||||| |||||||| |
|
|
| T |
4461367 |
gtgatcagccagcaaactgtagatttatttgcaacaaatgggagattggacttgaaatcgataaagatgtgaagagggatgaggtggagaagttggtcaa |
4461268 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
||||||||| |
|
|
| T |
4461267 |
cgaattgatg |
4461258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4622490 - 4622276
Alignment:
| Q |
1 |
acttaaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattt |
100 |
Q |
| |
|
||||||||||| | |||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
4622490 |
acttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgttggccattt |
4622391 |
T |
|
| Q |
101 |
tttgctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttgg |
200 |
Q |
| |
|
|| |||||||||||| ||||||| |||||||| |||||| ||||||||||||| || ||||| | || |||||||| ||||| ||||| |||| || |
|
|
| T |
4622390 |
ttcgctgatcagccaacaaactgtagatatatctgcaattcatgggagattggaatcgaaatcaatactaatgtgaaaagagaggaggtgtcgaatctga |
4622291 |
T |
|
| Q |
201 |
tcaatgaattgatgt |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4622290 |
tcaatgaattgatgt |
4622276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 4592575 - 4592366
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||| |
|
|
| T |
4592575 |
aaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattccaatgttgtgttggccattcttta |
4592476 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| |||| |||||||||||| ||||||||||| || ||||| |||||||| ||||| ||||| | |||| |
|
|
| T |
4592475 |
gtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattgatacgaatgtaaagagagaggaggtggagaaacttatcaa |
4592376 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4592375 |
tgaattgatg |
4592366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 4266954 - 4267163
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| ||| |||||| |||||||||||||||| |||| ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4266954 |
aaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttg |
4267053 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||||||||| ||||||| |||| ||||||| || |||||||||||| | ||||| | || ||||||||||||||||| || ||||| || ||||| |
|
|
| T |
4267054 |
gtgatcagccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcaatacaaatgtgaagagagatgacgtcgagaagttagtcaa |
4267153 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4267154 |
tgaattgatg |
4267163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 4598507 - 4598305
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||||||||| ||||||| |||||||| |||| |||||||||||||||||| |||| ||| ||||| |||||||||||||| || ||||| || |||||| |
|
|
| T |
4598507 |
ttcaattggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcag |
4598408 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
212 |
Q |
| |
|
| ||| ||||||||||||||||||||| |||||||||||| || ||||||| || |||||||||||||| ||||| ||||| ||||||| ||||||| |
|
|
| T |
4598407 |
caagccaactgcagatatatttgcaatgaatgggagattggaatcaaaattgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattga |
4598308 |
T |
|
| Q |
213 |
tgt |
215 |
Q |
| |
|
||| |
|
|
| T |
4598307 |
tgt |
4598305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 4470147 - 4469938
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| |
|
|
| T |
4470147 |
aaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattctttg |
4470048 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||||||| |||||| || |||| |||||||||| |||||||||||| | ||||| || | ||||||||||||||||||| ||||| | ||||| |
|
|
| T |
4470047 |
gtgatcagctagcaaattgtagatttatttgcaatgaatgggagattggacttgaaatcgataaagatgtgaagagagatgaggtggagaagctagtcaa |
4469948 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4469947 |
tgaattgatg |
4469938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 214
Target Start/End: Complemental strand, 4626287 - 4626086
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
4626287 |
ttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctgtgttggccaaattttgctgatcag |
4626188 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
212 |
Q |
| |
|
||| |||| || ||||||||||||||| |||||||||||| |||||||| || | ||||||||||| || | ||||||||| || |||||| ||||| |
|
|
| T |
4626187 |
ccaacaaattgtagatatatttgcaatgaatgggagattggaatggaaatcgatgctaatgtgaagagggagggggtagagaaactgatcaatgcattga |
4626088 |
T |
|
| Q |
213 |
tg |
214 |
Q |
| |
|
|| |
|
|
| T |
4626087 |
tg |
4626086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 4256407 - 4256610
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||| ||||| |||||||||||||||| |||| ||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4256407 |
ttcagttggtggattcttgactcattgaggatggaactcaaccattgaaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatcag |
4256506 |
T |
|
| Q |
113 |
-ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattg |
211 |
Q |
| |
|
||| ||||||| |||| |||||| | |||||||||||| || ||||| | || |||||||||||||||||||| |||||| || ||||||||||| |
|
|
| T |
4256507 |
accaacaaactgtagatttatttgtagcgaatgggagattggaattgaaatcaatactaatgtgaagagagatgaggtggagaatctgatcaatgaattg |
4256606 |
T |
|
| Q |
212 |
atgt |
215 |
Q |
| |
|
|||| |
|
|
| T |
4256607 |
atgt |
4256610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 4602114 - 4601955
Alignment:
| Q |
24 |
gattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactg |
123 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||| ||||||||| ||||||| |
|
|
| T |
4602114 |
gattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggcctttttttgccgatcagccaacaaactg |
4602015 |
T |
|
| Q |
124 |
cagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagaga |
183 |
Q |
| |
|
|||| |||||| ||| |||||||||||| |||||||| || || |||||||||||||| |
|
|
| T |
4602014 |
tagatttatttgtaatgaatgggagattggtatggaaatcgatacaaatgtgaagagaga |
4601955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 4457938 - 4457729
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| || |||||||||| |||| |
|
|
| T |
4457938 |
aaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgccaatgctgcgttggccattctttg |
4457839 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||| ||||| ||| || |||| |||||||||| ||| |||||||| |||||||| || || |||||||||||||||||||| ||||| || ||||| |
|
|
| T |
4457838 |
gtgataagccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaatcgatacaaatgtgaagagagatgaggtggagaagttagtcaa |
4457739 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4457738 |
tgaattgatg |
4457729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 4516646 - 4516460
Alignment:
| Q |
24 |
gattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactg |
123 |
Q |
| |
|
||||||||||||||||||||| |||||| || | |||||||| | ||| ||||| ||||||||||||||||| ||||||||||| |||||| |||| || |
|
|
| T |
4516646 |
gattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgttgtgttggcctttttttgctgagcagccaacaaattg |
4516547 |
T |
|
| Q |
124 |
cagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaatt |
210 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| ||||| ||||| || |||||||||| |
|
|
| T |
4516546 |
cagatatatttgcaatgaatgggagattggagcagaaattgataccaatgtgaagagagaggaggtggagaagctgatcaatgaatt |
4516460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 4259950 - 4260126
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||| ||||| ||||||| |||||||| |||| ||||||||||| ||||||||| | ||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4259950 |
ttcagttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaagttccaatgttgtgttggccattttttgctgatcag |
4260049 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggt |
189 |
Q |
| |
|
||| ||||||| |||| |||||| || |||||||||||| || |||||| | || |||||||| ||||||||||| |
|
|
| T |
4260050 |
ccaacaaactgtagatttatttgtaacgaatgggagattggaattgaaattaatactaatgtgaaaagagatgaggt |
4260126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 4506198 - 4505998
Alignment:
| Q |
8 |
caccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctg |
107 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||| |||||||||| || |||| || |
|
|
| T |
4506198 |
cacccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgctgtgttggccgttctttggtg |
4506099 |
T |
|
| Q |
108 |
atcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatga |
207 |
Q |
| |
|
|||| ||| ||||||| |||| |||||||||| || ||||||||| || |||||||| || |||||||| ||||| | |||||||| ||||| |||| |
|
|
| T |
4506098 |
atcaaccaacaaactgtagatttatttgcaatgaattggagattggaatcgaaattgatactaatgtgaatagagaaaatgtagagaagctggtcgatga |
4505999 |
T |
|
| Q |
208 |
a |
208 |
Q |
| |
|
| |
|
|
| T |
4505998 |
a |
4505998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 4490146 - 4490352
Alignment:
| Q |
8 |
caccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctg |
107 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||| |||||||| || || || |||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4490146 |
cacccttcaattggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctggagtgccaatgttgtgttggccattttttgctg |
4490245 |
T |
|
| Q |
108 |
atcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatga |
207 |
Q |
| |
|
|||| ||| | | | ||| ||||||| | |||||||||||| ||| ||||||| |||||||| |||||||| ||||||||||| || ||||||| |
|
|
| T |
4490246 |
atcaaccacttagcagtagaattatttgcgaagaatgggagattgggatgaaaattgataccaatgtaaagagagaagaggtagagaaactgatcaatga |
4490345 |
T |
|
| Q |
208 |
attgatg |
214 |
Q |
| |
|
||||||| |
|
|
| T |
4490346 |
attgatg |
4490352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 4617366 - 4617188
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||| || |||||||||||||||| |||| ||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
4617366 |
aaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagtgccaatgttgtgttggccattttttg |
4617267 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagaga |
183 |
Q |
| |
|
| || |||||| || |||| |||| |||||| ||| |||||||||||| |||||||| || || |||||||||||||| |
|
|
| T |
4617266 |
ccgaccagccaacagactgtagatttatttgtaatgaatgggagattggtatggaaatcgatacgaatgtgaagagaga |
4617188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 4514909 - 4515118
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||| |||| ||||||||||||||| ||||||| |||||||| |||||| | ||||||| ||| |||| |
|
|
| T |
4514909 |
aaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgagagcatatgcgctggagtgccaatgctttgttggcaattctttg |
4515008 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||||| ||| ||||||| |||| |||||||||| |||||||||||| || ||||| || | |||||||||||||| ||||| || || | ||||| |
|
|
| T |
4515009 |
gtgatcaaccaacaaactgtagatttatttgcaatgaatgggagattgggatcgaaatcgatatgaatgtgaagagagaggaggttgaaaagcttgtcaa |
4515108 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
4515109 |
tgaattgatg |
4515118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 4481037 - 4480831
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||| || |||||||||||||||| |||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4481037 |
aaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgccaatgttgtgttggccattctttg |
4480938 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
| ||||||||| | ||| | ||| |||||||||| |||||||||||| | ||||| || ||||||||||||||||| || || |||| || |||| |
|
|
| T |
4480937 |
ccgatcagccacctaaccgtagaattatttgcaatgaatgggagattggactcgaaatcgataccaatgtgaagagagaagatgtggagaggttaatcaa |
4480838 |
T |
|
| Q |
205 |
tgaattg |
211 |
Q |
| |
|
||||||| |
|
|
| T |
4480837 |
tgaattg |
4480831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 214
Target Start/End: Complemental strand, 3172077 - 3171876
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
||||||||| ||||||||||||| || |||| |||||||||||| ||||| ||| ||||||| | |||||||||||| ||||||||||||||||||| |
|
|
| T |
3172077 |
ttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgctggaatgccaatgttgtgtaggccattttttgctgatcaa |
3171978 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
212 |
Q |
| |
|
||| | ||| | ||| ||||||| | |||| ||||||| ||||||||||| |||||||| ||||||| ||||||||||| || |||| ||||||| |
|
|
| T |
3171977 |
ccacctaacagtagaattatttgccaagaatggaagattgggatggaaattgataccaatgtaaagagaggggaggtagagaaactgatcaacgaattga |
3171878 |
T |
|
| Q |
213 |
tg |
214 |
Q |
| |
|
|| |
|
|
| T |
3171877 |
tg |
3171876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 4504185 - 4504295
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
4504185 |
aaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgttgtgttggccattttttt |
4504284 |
T |
|
| Q |
105 |
ctgatcagcca |
115 |
Q |
| |
|
||||||||||| |
|
|
| T |
4504285 |
ctgatcagcca |
4504295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 4493299 - 4493151
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||| ||||||||| || ||| ||||| ||| ||||| ||||||||||||||||| || ||| |
|
|
| T |
4493299 |
aaccaccattcgattggtggattcttgactcattgtggatggaactcaactaccaaaaacatatgtgccggagtgccaatgttgtgttggcctttcttta |
4493200 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattgg |
153 |
Q |
| |
|
|||||||||| ||||||| |||| ||||||||| || ||||||||| |
|
|
| T |
4493199 |
gtgatcagccaacaaactgtagattgatttgcaatgaattggagattgg |
4493151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 195
Target Start/End: Complemental strand, 4568400 - 4568210
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||| |||| ||||||||||||||||||||| |||||| || |||||||| | ||| |||| |||||||| |||||||| |||||| |
|
|
| T |
4568400 |
aaccacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtaccaatgttatgttggcctttttttt |
4568301 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaa |
195 |
Q |
| |
|
|||| |||||| || |||||||||||||||| |||| | |||||| || || |||||||| || |||||||||||||| ||||| ||||| |
|
|
| T |
4568300 |
ctgagcagccaacatactgcagatatatttgtaataagttggagatcggaatcgaaattgatacaaatgtgaagagagaggaggtggagaa |
4568210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 4299609 - 4299672
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatat |
68 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||| |
|
|
| T |
4299609 |
aaccacccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcatat |
4299672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 158; Significance: 3e-84; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 16686063 - 16686264
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16686063 |
ttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgtgttggccattttttgctgatcag |
16686162 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
212 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
16686163 |
ccagcaaaatgcagatatatttgcaatgaatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtggagaaattggtcaatgaattga |
16686262 |
T |
|
| Q |
213 |
tg |
214 |
Q |
| |
|
|| |
|
|
| T |
16686263 |
tg |
16686264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 20863639 - 20863840
Alignment:
| Q |
13 |
ttcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcag |
112 |
Q |
| |
|
|||||||||| |||| | ||||||||||||| ||||||||||| ||| ||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
20863639 |
ttcaattggtggatttctaactcattgtggatggaactcaaccattgagagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatcag |
20863738 |
T |
|
| Q |
113 |
ccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattga |
212 |
Q |
| |
|
|| ||||||||||||| |||||||| | |||||||||||| || ||||||||||||||||| |||||||| ||||| |||| |||| |||||||||| |
|
|
| T |
20863739 |
ccgacaaactgcagatacatttgcaacaaatgggagattgggatcgaaattgacaccaatgtcaagagagaggaggtggagatgctggtaaatgaattga |
20863838 |
T |
|
| Q |
213 |
tg |
214 |
Q |
| |
|
|| |
|
|
| T |
20863839 |
tg |
20863840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 1674570 - 1674392
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||| || |||||||||| || || |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
1674570 |
aaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattttttg |
1674471 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagaga |
183 |
Q |
| |
|
||||||||||| ||||||| |||| |||||| ||| |||| ||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
1674470 |
ctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattgatacgaatgtgaagagaga |
1674392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 1281458 - 1281250
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1281458 |
aaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttg |
1281359 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
||||||||||| || |||| |||| |||||| ||| |||| ||||||| |||||||| || || |||||||||||||| ||||| | || ||| |||| |
|
|
| T |
1281358 |
ctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtggctaagttgatcaa |
1281259 |
T |
|
| Q |
205 |
tgaattgat |
213 |
Q |
| |
|
||||||||| |
|
|
| T |
1281258 |
tgaattgat |
1281250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 24103343 - 24103134
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| ||| |||||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |
|
|
| T |
24103343 |
aaccacccttcgattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttg |
24103244 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
|||||| ||| ||||||| |||| ||||||| || |||||||||||| | ||||| || || ||||||||||||||||| || ||||| || ||||| |
|
|
| T |
24103243 |
gtgatcaaccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcgatacaaatgtgaagagagatgacgtcgagaagttagtcaa |
24103144 |
T |
|
| Q |
205 |
tgaattgatg |
214 |
Q |
| |
|
|||||||||| |
|
|
| T |
24103143 |
tgaattgatg |
24103134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 27999908 - 28000061
Alignment:
| Q |
26 |
ttcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactgca |
125 |
Q |
| |
|
||||||||||| || |||| |||||||||||| |||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||||| | |
|
|
| T |
27999908 |
ttcttgactcactgcggatggaactcaaccaccgaaagcatatgcgctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgta |
28000007 |
T |
|
| Q |
126 |
gatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaaga |
179 |
Q |
| |
|
||| |||||| ||| |||| ||||||| ||||||||||| | |||||||||| |
|
|
| T |
28000008 |
gatttatttgtaatgaatggaagattggtatggaaattgatatgaatgtgaaga |
28000061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 4474 - 4684
Alignment:
| Q |
5 |
aaccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttg |
104 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||| | |
|
|
| T |
4474 |
aaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgttggccatttttcg |
4573 |
T |
|
| Q |
105 |
ctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaa |
204 |
Q |
| |
|
| ||||||||| |||||| | ||||| | | ||| |||||||| ||| ||||||||||| || |||||||||||||| ||||| |||| || |||| |
|
|
| T |
4574 |
ccgatcagccaacaaactatcggtatatctcccatatatgggagactggtatggaaattgatactaatgtgaagagagagaaggtaacgaatatgatcaa |
4673 |
T |
|
| Q |
205 |
tgaattgatgt |
215 |
Q |
| |
|
||||||||||| |
|
|
| T |
4674 |
tgaattgatgt |
4684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 3086761 - 3086555
Alignment:
| Q |
8 |
caccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctg |
107 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||| || ||||||||| |||||||||||||||||||||| || | |
|
|
| T |
3086761 |
cacccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttgtgttggccattttatggag |
3086662 |
T |
|
| Q |
108 |
atcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatga |
207 |
Q |
| |
|
|||| ||| |||||| |||||||| ||||||| |||||||||||| || ||||| || || |||||||||||||| ||||| ||||| || ||||||| |
|
|
| T |
3086661 |
atcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatga |
3086562 |
T |
|
| Q |
208 |
attgatg |
214 |
Q |
| |
|
||||||| |
|
|
| T |
3086561 |
attgatg |
3086555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 212
Target Start/End: Original strand, 3509 - 3714
Alignment:
| Q |
7 |
ccaccattcaattggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgct |
106 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||| | ||||||||||| |||| | |
|
|
| T |
3509 |
ccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtaccaatgctttgttggccattctttggt |
3608 |
T |
|
| Q |
107 |
gatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatg |
206 |
Q |
| |
|
||||||||| ||||||| |||| ||||||||| |||||||||||| | ||||| || | ||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
3609 |
gatcagccaacaaactgtagatttatttgcaacgaatgggagattggacttgaaatcgatatggatgtgaagagagatgaggtggagaagctagtcaatg |
3708 |
T |
|
| Q |
207 |
aattga |
212 |
Q |
| |
|
|||||| |
|
|
| T |
3709 |
aattga |
3714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 3485 - 3662
Alignment:
| Q |
18 |
ttggttgattcttgactcattgtggattgaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagc |
117 |
Q |
| |
|
||||| ||||||| ||||||||||||| ||||||||||| ||||||||| | | |||||||||||||| || ||||||||||||| | || || || | |
|
|
| T |
3485 |
ttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttctggagttccaatgctgcgttggccatttttccccgaacactcaac |
3584 |
T |
|
| Q |
118 |
aaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaa |
195 |
Q |
| |
|
|||||| |||| ||||| ||| |||||||||||| | ||||| || |||||||||||||||| ||||| ||||| |
|
|
| T |
3585 |
aaactgtagatgcatttggaatgaatgggagattggaagtgaaatagattccaatgtgaagagagaggaggtggagaa |
3662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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