View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5951_low_6 (Length: 530)

Name: NF5951_low_6
Description: NF5951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5951_low_6
NF5951_low_6
[»] chr3 (81 HSPs)
chr3 (1-240)||(6110064-6110303)
chr3 (1-240)||(10572560-10572799)
chr3 (1-240)||(15600852-15601091)
chr3 (1-240)||(15607397-15607636)
chr3 (1-238)||(16482451-16482688)
chr3 (1-237)||(13211305-13211541)
chr3 (1-240)||(13248607-13248846)
chr3 (1-234)||(10579323-10579556)
chr3 (1-238)||(18522665-18522902)
chr3 (1-234)||(17781086-17781319)
chr3 (1-240)||(15357554-15357793)
chr3 (1-240)||(8490488-8490734)
chr3 (1-238)||(18519980-18520214)
chr3 (1-221)||(15342187-15342407)
chr3 (1-238)||(13516813-13517050)
chr3 (1-238)||(17200152-17200389)
chr3 (22-234)||(19089734-19089946)
chr3 (1-234)||(32056868-32057101)
chr3 (1-234)||(1647489-1647726)
chr3 (333-509)||(5128822-5128998)
chr3 (362-530)||(43306651-43306819)
chr3 (79-240)||(18640792-18640953)
chr3 (1-238)||(16200128-16200363)
chr3 (5-240)||(29924971-29925206)
chr3 (5-240)||(29974124-29974359)
chr3 (353-509)||(43303960-43304117)
chr3 (362-530)||(3068854-3069022)
chr3 (1-238)||(16200434-16200669)
chr3 (353-510)||(3063736-3063894)
chr3 (1-134)||(17136465-17136598)
chr3 (1-233)||(24253356-24253589)
chr3 (346-424)||(40593528-40593605)
chr3 (353-419)||(53012958-53013025)
chr3 (276-334)||(6109970-6110028)
chr3 (176-238)||(18534758-18534820)
chr3 (276-333)||(13248514-13248571)
chr3 (276-332)||(8490396-8490452)
chr3 (276-333)||(13211210-13211267)
chr3 (276-332)||(18640989-18641045)
chr3 (341-423)||(41218724-41218806)
chr3 (336-423)||(4580479-4580565)
chr3 (276-335)||(15607672-15607732)
chr3 (276-332)||(17136137-17136193)
chr3 (282-332)||(10579603-10579653)
chr3 (420-509)||(2472689-2472777)
chr3 (276-333)||(15351237-15351294)
chr3 (276-333)||(15357829-15357886)
chr3 (276-333)||(17200427-17200484)
chr3 (193-238)||(18510924-18510969)
chr3 (276-332)||(16482727-16482782)
chr3 (276-332)||(18519885-18519941)
chr3 (420-499)||(52708844-52708923)
chr3 (282-333)||(10572840-10572891)
chr3 (427-490)||(45168338-45168401)
chr3 (276-333)||(15601127-15601185)
chr3 (420-509)||(365593-365681)
chr3 (276-333)||(13516718-13516775)
chr3 (276-333)||(17781358-17781415)
chr3 (276-333)||(19089985-19090042)
chr3 (335-423)||(20398486-20398574)
chr3 (276-332)||(1647768-1647824)
chr3 (276-332)||(32057144-32057200)
chr3 (334-420)||(33620096-33620181)
chr3 (335-389)||(39913348-39913403)
chr3 (345-422)||(19949927-19950004)
chr3 (276-333)||(18510828-18510885)
chr3 (276-333)||(18522569-18522626)
chr3 (276-333)||(18534662-18534719)
chr3 (1-77)||(9504446-9504522)
chr3 (335-390)||(45168410-45168466)
chr3 (14-153)||(19345656-19345795)
chr3 (335-413)||(19795168-19795244)
chr3 (422-488)||(35908506-35908572)
chr3 (336-401)||(25857707-25857773)
chr3 (367-421)||(1151150-1151201)
chr3 (335-423)||(25340169-25340256)
chr3 (276-332)||(29924879-29924935)
chr3 (276-332)||(29974032-29974088)
chr3 (11-69)||(14147012-14147070)
chr3 (420-508)||(33175835-33175922)
chr3 (478-506)||(53013020-53013048)
[»] scaffold0234 (4 HSPs)
scaffold0234 (1-240)||(2289-2528)
scaffold0234 (1-240)||(11180-11419)
scaffold0234 (276-333)||(2564-2621)
scaffold0234 (276-333)||(11455-11512)
[»] chr4 (84 HSPs)
chr4 (1-240)||(19926728-19926967)
chr4 (1-240)||(26970463-26970702)
chr4 (1-240)||(55612683-55612922)
chr4 (1-240)||(5707320-5707559)
chr4 (1-240)||(26963640-26963879)
chr4 (1-238)||(18262214-18262451)
chr4 (1-240)||(868597-868836)
chr4 (1-240)||(5713948-5714187)
chr4 (1-240)||(10621301-10621540)
chr4 (1-240)||(10628380-10628619)
chr4 (1-238)||(18269070-18269312)
chr4 (1-238)||(4426572-4426808)
chr4 (1-238)||(28393102-28393339)
chr4 (1-228)||(8845215-8845442)
chr4 (1-228)||(8858179-8858406)
chr4 (331-510)||(6659330-6659508)
chr4 (1-232)||(20311299-20311531)
chr4 (125-240)||(12357136-12357251)
chr4 (1-234)||(35223576-35223799)
chr4 (16-234)||(10677538-10677753)
chr4 (16-234)||(10891178-10891393)
chr4 (1-234)||(5668095-5668327)
chr4 (333-423)||(13085178-13085268)
chr4 (24-238)||(5616215-5616431)
chr4 (333-423)||(13086221-13086311)
chr4 (353-423)||(22716590-22716661)
chr4 (276-333)||(5713855-5713912)
chr4 (276-333)||(26963547-26963604)
chr4 (276-333)||(26970370-26970427)
chr4 (276-332)||(19927003-19927059)
chr4 (362-421)||(22691253-22691312)
chr4 (353-423)||(22988556-22988627)
chr4 (1-202)||(56516094-56516295)
chr4 (276-333)||(10621576-10621633)
chr4 (276-332)||(5707228-5707284)
chr4 (420-508)||(7723665-7723751)
chr4 (276-332)||(12357044-12357100)
chr4 (276-330)||(868507-868561)
chr4 (420-524)||(13991365-13991468)
chr4 (276-332)||(10628655-10628711)
chr4 (276-332)||(17142372-17142428)
chr4 (276-332)||(55612594-55612650)
chr4 (420-530)||(54700577-54700686)
chr4 (341-422)||(2053095-2053176)
chr4 (420-510)||(24667657-24667746)
chr4 (278-332)||(28393380-28393434)
chr4 (276-333)||(18268975-18269032)
chr4 (276-332)||(4426847-4426903)
chr4 (332-423)||(9596853-9596944)
chr4 (420-509)||(19935487-19935575)
chr4 (336-419)||(4053062-4053145)
chr4 (31-214)||(21454135-21454319)
chr4 (124-191)||(39074278-39074346)
chr4 (424-510)||(40206153-40206238)
chr4 (420-476)||(21433595-21433652)
chr4 (276-325)||(55992680-55992729)
chr4 (417-476)||(18689553-18689613)
chr4 (420-475)||(38888023-38888079)
chr4 (23-103)||(39074190-39074270)
chr4 (424-530)||(7634084-7634189)
chr4 (424-482)||(10494907-10494966)
chr4 (423-485)||(22486799-22486861)
chr4 (343-418)||(54239531-54239604)
chr4 (2-84)||(9937933-9938015)
chr4 (423-480)||(18657070-18657128)
chr4 (6-56)||(24700213-24700263)
chr4 (276-317)||(5668371-5668412)
chr4 (335-420)||(38223117-38223200)
chr4 (276-324)||(8845118-8845166)
chr4 (276-324)||(8858082-8858130)
chr4 (276-316)||(18262136-18262176)
chr4 (24-202)||(30040740-30040919)
chr4 (330-417)||(34949082-34949169)
chr4 (131-190)||(11161913-11161972)
chr4 (362-421)||(19684822-19684880)
chr4 (426-457)||(50515947-50515978)
chr4 (276-330)||(20311207-20311261)
chr4 (420-457)||(9260573-9260610)
chr4 (24-69)||(11421007-11421052)
chr4 (420-457)||(13990729-13990766)
chr4 (24-69)||(18163153-18163198)
chr4 (424-499)||(17254893-17254968)
chr4 (276-324)||(24699958-24700006)
chr4 (444-512)||(55139096-55139163)
[»] chr1 (54 HSPs)
chr1 (1-240)||(18252030-18252269)
chr1 (1-240)||(18532482-18532721)
chr1 (1-240)||(27131377-27131616)
chr1 (1-238)||(21171201-21171438)
chr1 (1-238)||(27310545-27310782)
chr1 (1-238)||(16359003-16359240)
chr1 (1-234)||(36816601-36816834)
chr1 (2-240)||(3855888-3856126)
chr1 (333-509)||(50857444-50857620)
chr1 (362-529)||(13443968-13444135)
chr1 (2-240)||(22657190-22657429)
chr1 (353-509)||(8931153-8931309)
chr1 (1-234)||(27277525-27277756)
chr1 (1-206)||(12014252-12014457)
chr1 (362-503)||(13441612-13441746)
chr1 (1-206)||(12006507-12006712)
chr1 (1-228)||(9917886-9918106)
chr1 (420-529)||(28660727-28660835)
chr1 (425-530)||(23987581-23987686)
chr1 (276-332)||(18251936-18251992)
chr1 (276-332)||(18532757-18532813)
chr1 (342-421)||(12486314-12486392)
chr1 (420-509)||(31915550-31915638)
chr1 (276-332)||(27310821-27310877)
chr1 (331-421)||(40804571-40804660)
chr1 (341-418)||(42071413-42071489)
chr1 (276-332)||(16359280-16359336)
chr1 (1-84)||(23507056-23507139)
chr1 (427-509)||(40058102-40058184)
chr1 (276-333)||(21171479-21171536)
chr1 (420-530)||(10925740-10925846)
chr1 (276-334)||(3856164-3856222)
chr1 (420-485)||(12944116-12944182)
chr1 (423-485)||(31913380-31913442)
chr1 (279-333)||(36816881-36816935)
chr1 (330-422)||(12033638-12033730)
chr1 (280-333)||(22657469-22657522)
chr1 (165-234)||(30720625-30720694)
chr1 (420-476)||(50713713-50713770)
chr1 (424-485)||(43681465-43681528)
chr1 (427-462)||(10927199-10927234)
chr1 (276-332)||(27131652-27131704)
chr1 (133-210)||(3403248-3403325)
chr1 (133-210)||(3443494-3443571)
chr1 (419-499)||(9031016-9031096)
chr1 (276-332)||(27277800-27277856)
chr1 (369-420)||(42646624-42646674)
chr1 (420-475)||(8967836-8967893)
chr1 (420-509)||(10928289-10928377)
chr1 (420-476)||(8221488-8221545)
chr1 (2-34)||(22641839-22641871)
chr1 (425-509)||(26981516-26981598)
chr1 (420-499)||(28661078-28661157)
chr1 (420-471)||(33152756-33152808)
[»] scaffold0220 (2 HSPs)
scaffold0220 (1-240)||(18288-18527)
scaffold0220 (276-332)||(18196-18252)
[»] chr7 (68 HSPs)
chr7 (1-240)||(29327784-29328023)
chr7 (1-240)||(11536030-11536269)
chr7 (1-240)||(11542948-11543187)
chr7 (1-238)||(15152445-15152682)
chr7 (1-238)||(18561009-18561246)
chr7 (1-238)||(12750828-12751065)
chr7 (19-238)||(15148144-15148363)
chr7 (1-234)||(12738542-12738775)
chr7 (333-509)||(13882686-13882862)
chr7 (1-238)||(18257810-18258047)
chr7 (362-509)||(859156-859303)
chr7 (362-509)||(1217160-1217307)
chr7 (407-530)||(13886138-13886261)
chr7 (333-452)||(13886245-13886364)
chr7 (387-523)||(1220426-1220562)
chr7 (1-234)||(13392157-13392389)
chr7 (22-218)||(2364917-2365112)
chr7 (333-423)||(4303363-4303453)
chr7 (420-527)||(1874538-1874645)
chr7 (1-207)||(7396221-7396431)
chr7 (332-423)||(31577269-31577360)
chr7 (3-234)||(39111819-39112049)
chr7 (420-530)||(1365672-1365780)
chr7 (424-509)||(4888686-4888770)
chr7 (276-333)||(11543223-11543280)
chr7 (276-332)||(2653275-2653331)
chr7 (276-332)||(12738443-12738499)
chr7 (420-487)||(27309636-27309704)
chr7 (276-333)||(11536305-11536362)
chr7 (276-333)||(12750732-12750789)
chr7 (276-333)||(15152349-15152406)
chr7 (420-499)||(1786683-1786763)
chr7 (420-523)||(1883489-1883592)
chr7 (277-333)||(29327689-29327745)
chr7 (443-501)||(29175780-29175838)
chr7 (420-476)||(24840143-24840200)
chr7 (276-332)||(15148049-15148105)
chr7 (420-475)||(27142666-27142722)
chr7 (423-485)||(5934607-5934670)
chr7 (420-482)||(3778735-3778797)
chr7 (468-530)||(4300525-4300587)
chr7 (420-509)||(7803031-7803120)
chr7 (420-485)||(11000849-11000915)
chr7 (424-485)||(30217819-30217879)
chr7 (277-333)||(13392029-13392085)
chr7 (367-423)||(22572475-22572530)
chr7 (123-166)||(3132748-3132791)
chr7 (333-423)||(5678299-5678388)
chr7 (333-423)||(5703351-5703440)
chr7 (420-485)||(1369805-1369871)
chr7 (420-485)||(11228721-11228787)
chr7 (424-476)||(1753630-1753683)
chr7 (125-190)||(10234179-10234244)
chr7 (1-41)||(10235361-10235401)
chr7 (276-332)||(18258087-18258143)
chr7 (427-481)||(8063831-8063885)
chr7 (468-530)||(22572398-22572459)
chr7 (333-374)||(4300470-4300511)
chr7 (333-417)||(4668258-4668342)
chr7 (420-476)||(11228981-11229038)
chr7 (208-240)||(2653207-2653239)
chr7 (276-332)||(18560913-18560969)
chr7 (3-59)||(47833927-47833983)
chr7 (420-482)||(6451776-6451839)
chr7 (424-530)||(8916357-8916462)
chr7 (367-421)||(32052989-32053041)
chr7 (341-400)||(32936869-32936926)
chr7 (420-485)||(35814871-35814936)
[»] chr6 (55 HSPs)
chr6 (1-240)||(27381220-27381459)
chr6 (1-240)||(27471603-27471842)
chr6 (1-238)||(17684437-17684674)
chr6 (1-238)||(16566288-16566525)
chr6 (1-240)||(29308890-29309129)
chr6 (1-240)||(29315850-29316089)
chr6 (1-240)||(17691408-17691647)
chr6 (1-238)||(188945-189182)
chr6 (1-238)||(11651725-11651962)
chr6 (22-238)||(25537148-25537364)
chr6 (353-530)||(3535967-3536144)
chr6 (353-512)||(3542178-3542337)
chr6 (333-523)||(30049829-30050019)
chr6 (1-238)||(13359237-13359474)
chr6 (333-523)||(30052116-30052306)
chr6 (336-505)||(29340810-29340980)
chr6 (7-201)||(20553561-20553755)
chr6 (333-423)||(11190412-11190500)
chr6 (2-217)||(27925772-27925992)
chr6 (1-202)||(17850463-17850663)
chr6 (276-330)||(17691683-17691737)
chr6 (276-333)||(27381495-27381552)
chr6 (276-333)||(27471878-27471935)
chr6 (276-333)||(29308797-29308854)
chr6 (276-333)||(29315757-29315814)
chr6 (424-488)||(11658936-11659000)
chr6 (425-524)||(8048951-8049049)
chr6 (341-423)||(26571071-26571152)
chr6 (420-509)||(27822118-27822207)
chr6 (420-509)||(33615504-33615593)
chr6 (276-333)||(17684712-17684769)
chr6 (457-509)||(29342061-29342113)
chr6 (48-221)||(8509941-8510115)
chr6 (278-332)||(11651630-11651684)
chr6 (276-333)||(25537405-25537462)
chr6 (336-423)||(3565652-3565739)
chr6 (427-530)||(18718179-18718279)
chr6 (24-202)||(20736594-20736773)
chr6 (334-400)||(2339157-2339223)
chr6 (178-233)||(31258065-31258120)
chr6 (468-530)||(11190516-11190577)
chr6 (420-485)||(14238436-14238502)
chr6 (276-333)||(13359512-13359569)
chr6 (276-324)||(16566563-16566611)
chr6 (427-499)||(18727115-18727186)
chr6 (424-485)||(1127258-1127320)
chr6 (420-485)||(12882123-12882189)
chr6 (363-421)||(13645898-13645955)
chr6 (276-332)||(189221-189280)
chr6 (363-422)||(2939780-2939837)
chr6 (276-318)||(16394484-16394526)
chr6 (367-401)||(19232329-19232363)
chr6 (159-224)||(22259925-22259990)
chr6 (428-475)||(22873822-22873870)
chr6 (426-485)||(33215186-33215246)
[»] scaffold0390 (4 HSPs)
scaffold0390 (1-240)||(6902-7141)
scaffold0390 (1-240)||(13918-14157)
scaffold0390 (276-333)||(7177-7234)
scaffold0390 (276-332)||(14193-14249)
[»] chr8 (52 HSPs)
chr8 (1-240)||(21940665-21940904)
chr8 (1-238)||(22171491-22171726)
chr8 (1-234)||(6094129-6094362)
chr8 (1-234)||(24642655-24642888)
chr8 (333-530)||(42891643-42891840)
chr8 (39-238)||(28554885-28555084)
chr8 (335-530)||(22512025-22512220)
chr8 (336-509)||(22921850-22922023)
chr8 (341-530)||(22926627-22926816)
chr8 (341-509)||(22520799-22520967)
chr8 (333-510)||(6845249-6845426)
chr8 (333-530)||(42890311-42890500)
chr8 (333-530)||(37189780-37189976)
chr8 (386-530)||(22519325-22519469)
chr8 (353-501)||(23570516-23570665)
chr8 (107-234)||(24636860-24636987)
chr8 (353-476)||(23573515-23573639)
chr8 (333-422)||(18180770-18180859)
chr8 (420-530)||(2189701-2189810)
chr8 (5-228)||(38232349-38232570)
chr8 (420-509)||(18468649-18468737)
chr8 (420-530)||(2687742-2687851)
chr8 (420-530)||(26374900-26375009)
chr8 (276-332)||(21940573-21940629)
chr8 (276-332)||(22070108-22070164)
chr8 (424-509)||(24731231-24731316)
chr8 (1-210)||(32872809-32873019)
chr8 (276-333)||(22171395-22171452)
chr8 (280-333)||(24642555-24642608)
chr8 (276-332)||(6094031-6094087)
chr8 (276-333)||(28554790-28554847)
chr8 (1-144)||(14983888-14984030)
chr8 (420-530)||(16598249-16598359)
chr8 (333-399)||(26150602-26150669)
chr8 (468-530)||(18180692-18180753)
chr8 (423-510)||(24731035-24731122)
chr8 (161-219)||(2375027-2375085)
chr8 (342-422)||(15081494-15081572)
chr8 (335-423)||(38082173-38082260)
chr8 (139-202)||(10920234-10920297)
chr8 (332-423)||(4360891-4360983)
chr8 (420-457)||(2609547-2609584)
chr8 (341-422)||(9295256-9295335)
chr8 (420-499)||(14130165-14130244)
chr8 (420-475)||(20693799-20693855)
chr8 (420-486)||(24578799-24578866)
chr8 (450-509)||(26378031-26378089)
chr8 (279-333)||(2374946-2375000)
chr8 (420-457)||(2689146-2689183)
chr8 (24-69)||(8371519-8371564)
chr8 (24-69)||(18835341-18835386)
chr8 (295-332)||(24636605-24636642)
[»] chr2 (48 HSPs)
chr2 (1-240)||(21330216-21330455)
chr2 (333-530)||(27956133-27956330)
chr2 (1-240)||(18796506-18796745)
chr2 (333-509)||(27952318-27952494)
chr2 (341-530)||(2155887-2156077)
chr2 (331-530)||(31634015-31634214)
chr2 (353-510)||(22011368-22011526)
chr2 (333-510)||(33655540-33655717)
chr2 (330-510)||(31636247-31636427)
chr2 (1-238)||(18619807-18620043)
chr2 (420-530)||(36647293-36647402)
chr2 (95-234)||(19692598-19692737)
chr2 (48-175)||(20977957-20978084)
chr2 (420-530)||(33051618-33051728)
chr2 (1-206)||(36270199-36270405)
chr2 (420-509)||(15129390-15129478)
chr2 (1-206)||(18822115-18822322)
chr2 (335-423)||(8781429-8781515)
chr2 (425-530)||(28737911-28738014)
chr2 (276-332)||(21330493-21330549)
chr2 (333-423)||(22264348-22264437)
chr2 (425-509)||(2165899-2165983)
chr2 (1-120)||(18852027-18852146)
chr2 (420-485)||(23457646-23457712)
chr2 (362-423)||(44675308-44675368)
chr2 (420-498)||(5171596-5171674)
chr2 (420-498)||(21772375-21772452)
chr2 (1-78)||(22183451-22183528)
chr2 (420-484)||(32161993-32162058)
chr2 (420-475)||(12966477-12966532)
chr2 (1-83)||(19279445-19279527)
chr2 (420-509)||(1518193-1518281)
chr2 (333-420)||(18725683-18725770)
chr2 (336-421)||(2165838-2165924)
chr2 (336-422)||(5841221-5841305)
chr2 (424-485)||(8294582-8294644)
chr2 (24-69)||(12098609-12098654)
chr2 (276-333)||(19692773-19692830)
chr2 (420-524)||(32163757-32163860)
chr2 (425-475)||(23456580-23456631)
chr2 (420-454)||(4184929-4184963)
chr2 (424-485)||(28737841-28737903)
chr2 (24-58)||(28741292-28741326)
chr2 (1-54)||(36801950-36802003)
chr2 (276-333)||(18796411-18796470)
chr2 (24-60)||(19616435-19616471)
chr2 (27-59)||(29800468-29800500)
chr2 (49-204)||(36802664-36802820)
[»] scaffold0433 (2 HSPs)
scaffold0433 (1-240)||(7107-7346)
scaffold0433 (276-333)||(7014-7071)
[»] chr5 (37 HSPs)
chr5 (1-240)||(24695434-24695673)
chr5 (1-238)||(19714466-19714703)
chr5 (11-240)||(18569841-18570070)
chr5 (1-234)||(19707186-19707419)
chr5 (333-509)||(40778786-40778962)
chr5 (333-530)||(21848944-21849147)
chr5 (1-235)||(27347446-27347679)
chr5 (1-234)||(22546984-22547217)
chr5 (1-174)||(18807002-18807175)
chr5 (1-127)||(39538701-39538827)
chr5 (131-240)||(39537962-39538071)
chr5 (55-236)||(17285754-17285935)
chr5 (276-333)||(24695709-24695766)
chr5 (420-530)||(19497283-19497393)
chr5 (131-234)||(31886537-31886640)
chr5 (55-236)||(17298907-17299088)
chr5 (276-332)||(19714742-19714798)
chr5 (341-423)||(19677217-19677298)
chr5 (276-334)||(19707462-19707520)
chr5 (276-332)||(27347722-27347778)
chr5 (420-509)||(18252416-18252504)
chr5 (423-509)||(8456380-8456465)
chr5 (420-499)||(22440858-22440936)
chr5 (276-336)||(18570108-18570168)
chr5 (420-485)||(492567-492633)
chr5 (124-214)||(33477389-33477479)
chr5 (1-44)||(17285716-17285759)
chr5 (277-332)||(39537870-39537925)
chr5 (420-509)||(26140343-26140431)
chr5 (336-422)||(35160815-35160899)
chr5 (478-509)||(21844437-21844468)
chr5 (24-58)||(20100509-20100543)
chr5 (420-457)||(9868457-9868494)
chr5 (122-190)||(11479420-11479489)
chr5 (24-69)||(12765260-12765305)
chr5 (24-80)||(31267928-31267984)
chr5 (15-59)||(39535465-39535509)
[»] scaffold0657 (2 HSPs)
scaffold0657 (1-240)||(993-1232)
scaffold0657 (276-332)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (1-240)||(25958-26197)
scaffold0186 (277-333)||(26231-26287)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-238)||(5531-5768)
scaffold0063 (276-333)||(5435-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (57-238)||(230365-230545)
scaffold0008 (276-332)||(230584-230640)
[»] scaffold0110 (3 HSPs)
scaffold0110 (336-509)||(45262-45435)
scaffold0110 (436-529)||(46713-46806)
scaffold0110 (333-421)||(46792-46880)
[»] scaffold0176 (2 HSPs)
scaffold0176 (176-240)||(8446-8510)
scaffold0176 (276-333)||(8546-8603)
[»] scaffold0203 (1 HSPs)
scaffold0203 (276-333)||(23769-23826)
[»] scaffold0240 (3 HSPs)
scaffold0240 (424-530)||(16051-16154)
scaffold0240 (423-530)||(14850-14955)
scaffold0240 (420-485)||(1658-1723)
[»] scaffold0326 (2 HSPs)
scaffold0326 (276-333)||(16522-16579)
scaffold0326 (207-240)||(16615-16648)
[»] scaffold0531 (1 HSPs)
scaffold0531 (425-524)||(11574-11672)
[»] scaffold0054 (2 HSPs)
scaffold0054 (423-481)||(37714-37772)
scaffold0054 (420-473)||(49322-49375)
[»] scaffold0705 (1 HSPs)
scaffold0705 (276-333)||(41-98)
[»] scaffold0637 (1 HSPs)
scaffold0637 (276-332)||(8944-9000)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-83)||(90083-90166)
[»] scaffold0251 (2 HSPs)
scaffold0251 (333-422)||(8243-8331)
scaffold0251 (420-485)||(9702-9769)
[»] scaffold0565 (2 HSPs)
scaffold0565 (276-330)||(10202-10256)
scaffold0565 (190-221)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (296-332)||(1-37)
[»] scaffold0024 (1 HSPs)
scaffold0024 (420-485)||(145734-145800)
[»] scaffold0330 (1 HSPs)
scaffold0330 (420-485)||(17640-17705)
[»] scaffold0170 (1 HSPs)
scaffold0170 (280-333)||(5877-5930)
[»] scaffold0236 (1 HSPs)
scaffold0236 (424-488)||(16402-16466)
[»] scaffold0393 (1 HSPs)
scaffold0393 (24-69)||(15089-15134)
[»] scaffold0154 (1 HSPs)
scaffold0154 (367-400)||(28711-28744)
[»] scaffold0032 (1 HSPs)
scaffold0032 (139-211)||(92194-92267)


Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 6110303 - 6110064
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110303 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 6110204  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110203 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 6110104  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6110103 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 6110064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 10572560 - 10572799
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572560 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 10572659  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572660 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 10572759  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10572760 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 10572799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 15600852 - 15601091
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600852 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 15600951  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600952 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 15601051  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  15601052 tattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15601091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 15607397 - 15607636
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607397 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 15607496  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607497 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 15607596  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  15607597 tattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16482451 - 16482688
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16482451 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 16482550  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482551 acggatactttgagagtagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 16482650  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16482651 tattttgaaacaaaacaaaatcaataaagaaatgcctt 16482688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 13211541 - 13211305
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13211541 gataactctttatccatgatctgtgagttgtgatcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgact 13211442  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211441 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 13211342  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  13211341 tattttgaaacaaaacaaaatcaataaagaaatgcct 13211305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13248846 - 13248607
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13248846 gataactctttatccatgatctgtgagttgtgatcatcagtctacctacataatagtctctatgctttaatgttatcccacttctcaacaaagcttgact 13248747  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248746 acgaatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 13248647  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13248646 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 13248607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10579323 - 10579556
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10579323 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgact 10579422  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10579423 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccatttaacggactaactattctagggactttat 10579522  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||||||||||||||||||||||    
T  10579523 tattttgaaacaaaacaaaatcaataaagaaatg 10579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18522902 - 18522665
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  18522902 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgcttaaatgatatcccacttctcaataaagcttgact 18522803  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522802 acggatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 18522703  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18522702 tattttgaaacaaaacaaaatcaataaagaaatgcctt 18522665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 17781086 - 17781319
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17781086 gataactctttatctatgatttgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 17781185  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781186 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 17781285  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||||||||||||||||||||||    
T  17781286 tattttgaaacaaaacaaaatcaataaagaaatg 17781319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 15357554 - 15357793
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  15357554 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgact 15357653  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15357654 acggatactttgagaataggttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttat 15357753  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  15357754 tattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15357793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 8490734 - 8490488
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataat-------agtctctatgctttaatgatatcccacttctcaacaaag 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  8490734 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatcgtctgtagtctctatgctttaatgatatcccacttctcaacaaag 8490635  T
Q  94 cttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggg 193  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8490634 cttgactacagatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctaggg 8490535  T
Q  194 actttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8490534 actttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 8490488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18520214 - 18519980
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18520214 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 18520115  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||   || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520114 acggat---ttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 18520018  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18520017 tattttgaaacaaaacaaaatcaataaagaaatgcctt 18519980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15342187 - 15342407
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  15342187 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgact 15342286  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  15342287 acggatactttgagaataggttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgaacaaactattctagggactttat 15342386  T
Q  201 tattttgaaacaaaacaaaat 221  Q
    |||||||||||||||||||||    
T  15342387 tattttgaaacaaaacaaaat 15342407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 13517050 - 13516813
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  13517050 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctctgtgctttaatgatatcctacttctcaataaagcttgact 13516951  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13516950 acagatactttaagaatcgtttccttatgtttaacggggtctcacaattaagttatacttaatgttccatgaaacagactaactattctagggactttat 13516851  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13516850 tattttgaaacaaaacaaaatcaataaagaaatgcctt 13516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 17200152 - 17200389
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| ||||||| |||    
T  17200152 gataactctttatccacgatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatcacacatctcaataaagcttaact 17200251  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200252 acggatactttaagaatagtttcattatgtttaaaggggtatcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 17200351  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17200352 tattttgaaacaaaacaaaatcaataaagaaatgcctt 17200389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 19089734 - 19089946
Alignment:
Q  22 tgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  19089734 tgtgagatgtgatcatcagtctacctacataatagtctctatgatttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtt 19089833  T
Q  122 tccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 221  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19089834 tcattatgtttaaaggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaat 19089933  T
Q  222 caataaagaaatg 234  Q
    |||||||||||||    
T  19089934 caataaagaaatg 19089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 32056868 - 32057101
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  32056868 gataactctttatccatgatctgtgagatgtgatcattagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagtttgact 32056967  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  32056968 acggacactttaagaatagtttctttatgtttaacggggtcttacaataaagttatacttgatgttccattaaacagactaactattctagggactttat 32057067  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||||||||||||||||||||||    
T  32057068 tattttgaaacaaaacaaaatcaataaagaaatg 32057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 1647489 - 1647726
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||  ||||||| ||||||||| |    
T  1647489 gataactctttatccatgatctgtgagatgtgatcatcagtctatccacataatagtctctatgctttaattatatcccttttctcaataaagcttgatt 1647588  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaag----ttatacttaatgttccattaaacggactaactattctagggact 196  Q
    ||||||||||| | |||||||||||||||||||| |||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||||||||    
T  1647589 acggatactttaaaaatagtttccttatgtttaacggggtctcacaattaagttaattatacttaatgttccattaaacagactaactattctagggact 1647688  T
Q  197 ttattattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1647689 ttattattttgaaacaaaacaaaatcaataaagaaatg 1647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 333 - 509
Target Start/End: Original strand, 5128822 - 5128998
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5128822 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 5128921  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  5128922 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcctgctaaccctacgcttctgtactgcgtca 5128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 362 - 530
Target Start/End: Complemental strand, 43306819 - 43306651
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 461  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43306819 ttttctctcaattctggtggattacggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgttgcttgcaaacttgttcttt 43306720  T
Q  462 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43306719 tctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 43306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 18640792 - 18640953
Alignment:
Q  79 cacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgga 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18640792 cacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatgga 18640891  T
Q  179 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640892 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 16200363 - 16200128
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||  | ||| ||||||||| ||||||||||||||||||||||| ||| ||| |||||||    
T  16200363 gataactctttatccatgatctgtaagatatgatcatcagtctctccaca-aatagtctccatgctttaatgatatcccacttcacaataaatcttgact 16200265  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  16200264 acgaatactttaagaataatgtccttatgtttaatggggtctcacaattaagttatacataatgttccattaaacgaactaactattctaaggactttat 16200165  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||| |||| |||  ||||||||||||    
T  16200164 tattttgaaacaaaataaaa-caacgaagaaatgcctt 16200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 29925206 - 29924971
Alignment:
Q  5 actctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacgg 104  Q
    |||||||||||||||||| |||||||||||||||  |||| | ||||||||| ||| |||||||||||||||| |||||| ||| |||||||||||||      
T  29925206 actctttatccatgatctatgagatgtgatcatcgatctatccacataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacat 29925107  T
Q  105 atactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatt 204  Q
    ||| ||| |||||| | ||||||| |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||||| ||||||||||    
T  29925106 atattttaagaataatgtccttatatttaatggggtctcacaattaaattatacttaataatccattaaacggactaactattttaggggctttattatt 29925007  T
Q  205 ttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||| |||||    
T  29925006 ttgaaacaaaacaaaatcaataaagaaatgtcttgt 29924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 29974359 - 29974124
Alignment:
Q  5 actctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacgg 104  Q
    |||||||||||||||||| |||||||||||||||  |||| | ||||||||| ||| |||||||||||||||| |||||| ||| |||||||||||||      
T  29974359 actctttatccatgatctatgagatgtgatcatcgatctatccacataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacat 29974260  T
Q  105 atactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatt 204  Q
    ||| ||| |||||| | ||||||| |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||||| ||||||||||    
T  29974259 atattttaagaataatgtccttatatttaatggggtctcacaattaaattatacttaataatccattaaacggactaactattttaggggctttattatt 29974160  T
Q  205 ttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||| |||||    
T  29974159 ttgaaacaaaacaaaatcaataaagaaatgtcttgt 29974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 43304117 - 43303960
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43304117 tattcgagacttttctctcaattctggtggatttcggaaacccttattttaataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 43304018  T
Q  452 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  43304017 cttgttcttttctatctaggtttagcgcttgctaaccttacgcttccgtactgcgtca 43303960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 362 - 530
Target Start/End: Complemental strand, 3069022 - 3068854
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 461  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |  ||||||||||||||||||    
T  3069022 ttttctctcaattttggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatttttacaagttttttccttgcaaacttgttcttt 3068923  T
Q  462 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||    
T  3068922 tctatctaggtttagcgcttgctaaccatacgcttccgtactgcgtcagttggtattagagcatgtttc 3068854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 16200669 - 16200434
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||| |||||||||||||||||| |||| |||||||||||||  | ||| ||||||||  |||||||||||| |||||||||| ||| ||| |||||||    
T  16200669 gataattctttatccatgatctgtaagatatgatcatcagtctctccaca-aatagtcttcatgctttaatgacatcccacttcacaataaatcttgact 16200571  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||| ||||||| |||||| | |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  16200570 acgaatactttaagaataatgtccttatgtttattggagtctcacaattaagttatacataatgttccattaaacggactaactattctaaggactttat 16200471  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||| |||| |||  ||||||||||||    
T  16200470 tattttgaaacaaaataaaa-caacgaagaaatgcctt 16200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 353 - 510
Target Start/End: Complemental strand, 3063894 - 3063736
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3063894 tattcgagacttttctctcaattctggttgattccgaaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 3063795  T
Q  452 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    ||  ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  3063794 ctctttcttttctatctaggtttaacgcttgctaaccctacgctttcgtactgcgtcag 3063736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 17136598 - 17136465
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17136598 gataactctttatccatgatctgtgaaatgtgatcatcagtctacccacataatagtctctatgttttaatgatatcccacttctcaataaagcttgact 17136499  T
Q  101 acggatactttgagaatagtttccttatgtttaa 134  Q
    ||||||||||| ||||||||||||||||||||||    
T  17136498 acggatactttaagaatagtttccttatgtttaa 17136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 24253356 - 24253589
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||| ||  ||||||| ||||||| |||||||| ||||||||||||||||||||||||| || | |||||  ||| |||  |||||     
T  24253356 gataactctttatccataattcgtgagatatgatcattagtctaccgacataatagtctctatgctttaatgttacctcactttacaataaattttgacc 24253455  T
Q  101 acggatactttgagaatagtttccttatgtttaatgggg-tctcacaattaagttatacttaatgttccattaaacggactaactattctagggacttta 199  Q
    ||  ||||||| |||||||| ||||||||||| |||||| |||||| ||||||| |||||||||||||||| ||||| || | |||||||| ||||||||    
T  24253456 acatatactttaagaatagtgtccttatgtttgatggggatctcacgattaagtcatacttaatgttccatcaaacgaacgagctattctaaggacttta 24253555  T
Q  200 ttattttgaaacaaaacaaaatcaataaagaaat 233  Q
    ||||||||||  ||||||||||||||||||||||    
T  24253556 ttattttgaagtaaaacaaaatcaataaagaaat 24253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 346 - 424
Target Start/End: Complemental strand, 40593605 - 40593528
Alignment:
Q  346 ataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccc 424  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  40593605 ataaaattattcgagattttctctcaattttggtggattccgaaaaccctta-tttgataggtttgtcgcttgcaaccc 40593528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 53012958 - 53013025
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgc 419  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53012958 tattcgagacttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgc 53013025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 6110028 - 6109970
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaac 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110028 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaac 6109970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 18534820 - 18534758
Alignment:
Q  176 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18534820 ggactaactattctatggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18534758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 13248571 - 13248514
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248571 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 13248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 8490452 - 8490396
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490452 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 8490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 13211267 - 13211210
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13211267 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaacaa 13211210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 18640989 - 18641045
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18640989 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 18641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 423
Target Start/End: Original strand, 41218724 - 41218806
Alignment:
Q  341 attcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  41218724 attcaataataatattcgagacttttctctcaattctggtggattccggaaagcctta-tttgataggtttgtcgcttacaacc 41218806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 4580479 - 4580565
Alignment:
Q  336 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||| |||||||||||| |||||||| ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||    
T  4580479 ttttcattcaataaaat-attcgagaattttctctcaattctagtggattctgaaaaccctta-tttgataggtttgtcgcttgcaacc 4580565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 335
Target Start/End: Original strand, 15607672 - 15607732
Alignment:
Q  276 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaacaact 335  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  15607672 catgatacaaagccaaacccaataaaatatagattggctattagggcttattccaacaact 15607732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 17136193 - 17136137
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17136193 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 17136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 10579603 - 10579653
Alignment:
Q  282 acaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10579603 acaaagtcaaacccaatcaatatagattggctattagggcttattccaaca 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 2472777 - 2472689
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||||||||| ||||||||||||   |||| || ||||||||| ||||||| | ||||||||| ||||||||||||    
T  2472777 aaccctattttcacaagtttgtcggttgcaaacttgtctctttcaatttaggtttagcgcttgct-agcctacgctttcgtactgcgtca 2472689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 15351237 - 15351294
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  15351237 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 15351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 15357829 - 15357886
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  15357829 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 15357886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 17200427 - 17200484
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  17200427 catgctacaaagccaaacccaatcaacatagattggctattagggcttactccaacaa 17200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 18510969 - 18510924
Alignment:
Q  193 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510969 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18510924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 16482727 - 16482782
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16482727 catgatacaaagccaaacccaatcaatatagattgg-tattagggcttattctaaca 16482782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 18519941 - 18519885
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  18519941 catgatacaaaaccaaacccaatcaatatagattggctattaggacttactccaaca 18519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 52708844 - 52708923
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||| ||| ||||||||||||    
T  52708844 aaccctactttcacaagtttatcgcttgcaaatttgttctttttctatctaggtttagcgcttgttaa-cctacgcttccg 52708923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 10572840 - 10572891
Alignment:
Q  282 acaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  10572840 acaaagtcaaacccaatcaatataggttggctattagggcttattccaacaa 10572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 427 - 490
Target Start/End: Complemental strand, 45168401 - 45168338
Alignment:
Q  427 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccct 490  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||||  ||||||||||||    
T  45168401 ttttcacaagtttgtcgcttgcaaacttgtttatttcaatctaggtttagcacttgctaaccct 45168338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 15601127 - 15601185
Alignment:
Q  276 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaacaa 333  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  15601127 catgatacaaatccaaacccaataaaatatagattggctattagggcttattccaacaa 15601185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 365681 - 365593
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||||||||||||  || ||||| |||||| | ||||||||| | ||||| | |||||||||||||| |||||||    
T  365681 aaccctattttcacaagtttgtcgcttgggaatttgttattttctttttaggtttagcgtttgct-agcctacgcttccgtaatgcgtca 365593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 13516775 - 13516718
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  13516775 catgatacacagccaaactcaatcaacatagattggctattagggcttactccaacaa 13516718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 17781358 - 17781415
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  17781358 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaacaa 17781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 19089985 - 19090042
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  19089985 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaacaa 19090042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 20398574 - 20398486
Alignment:
Q  335 tttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||| ||| || |||| ||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||    
T  20398574 ttttttatttaagaaaaatattcgagacttttttctcaattctggtggattccgaaaaccctta-tttgatagacttgtcgcttgcaacc 20398486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 1647768 - 1647824
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||| |||||||    
T  1647768 catgatacaaagccaaacccaatcaatatagaccagctattagggcttactccaaca 1647824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 32057144 - 32057200
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||    
T  32057144 catgatacaaagtcaaacccaatcaacatagattggctattagagcttactccaaca 32057200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 33620181 - 33620096
Alignment:
Q  334 ctttttgattcaataaaattattcgagatttt-ctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 420  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||  ||||||||    
T  33620181 ctttttaattcaataaaaatat-cgagatttttctctcaattctggaggattctggaaaccctta-tttgataggttttgcgcttgca 33620096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 39913403 - 39913348
Alignment:
Q  335 tttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccgga 389  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  39913403 tttttgattcaataaaaatattcgagacttttctcccaattctggtggattccgga 39913348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 19949927 - 19950004
Alignment:
Q  345 aataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    ||||||| |||| |||| |||||||||||||||| ||||||||  ||||||||| ||||||| ||||||||||||||||    
T  19949927 aataaaaatattagagacttttctctcaattctgatggattccaaaaaccctta-tttgataagtttgtcgcttgcaac 19950004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 18510885 - 18510828
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  18510885 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaacaa 18510828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 18522626 - 18522569
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  18522626 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaacaa 18522569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 18534719 - 18534662
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||| | ||||||    
T  18534719 catgatacaaaaccaaactcaatcaatatagattgactattagggcttactacaacaa 18534662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9504522 - 9504446
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatc 77  Q
    |||||||| |||||||||| | |||||||  ||| ||||||||||| |||||||||| ||||| |||||| ||||||    
T  9504522 gataactccttatccatgacccgtgagataagattatcagtctacccacataatagtttctatcctttaaagatatc 9504446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 390
Target Start/End: Complemental strand, 45168466 - 45168410
Alignment:
Q  335 tttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 390  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  45168466 ttttttattcaataaaattattcgagattttctctcaatttcttgtggattctggaa 45168410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 19345795 - 19345656
Alignment:
Q  14 ccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttga 113  Q
    ||||||||| ||||| |||||||||||| |||| |||||||  ||| || ||||||||| ||| ||||||| |||  || ||| | |  |||| |||| |    
T  19345795 ccatgatctatgagacgtgatcatcagtatacccacataatgatctttacgctttaatgttataccacttcacaatgaaccttaattgaggattctttaa 19345696  T
Q  114 gaatagtttccttatgtttaatggggtctcacaattaagt 153  Q
    ||||||| | |||||  ||||||| ||||||| |||||||    
T  19345695 gaatagtgttcttataattaatggagtctcacgattaagt 19345656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 19795168 - 19795244
Alignment:
Q  335 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtc 413  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||| || ||  ||||||||  |||||||||||    
T  19795168 ttttttattcaataaaattattccagattttctctaaattttggtggatttcgtaa--ccttatttgcataggtttgtc 19795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 488
Target Start/End: Complemental strand, 35908572 - 35908506
Alignment:
Q  422 ccctattttcacaagtttgtcgcttgcaaactt-gttcttttctatctaggtttagtgcttgctaacc 488  Q
    ||||||||| |||||||||||| ||||||| || ||||||| |||||||||||||| |||||||||||    
T  35908572 ccctatttttacaagtttgtcgtttgcaaattttgttcttt-ctatctaggtttagcgcttgctaacc 35908506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 25857707 - 25857773
Alignment:
Q  336 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttatttt 401  Q
    |||| ||||||||| | |||| |||| ||||||||||||| ||||||||| ||||||||||||||||    
T  25857707 tttttattcaataataatatttgagacttttctctcaattgtggtggatttcggaaacccttatttt 25857773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 421
Target Start/End: Original strand, 1151150 - 1151201
Alignment:
Q  367 tctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||| ||||||||    
T  1151150 tctcaattctggtggattccgaaaaccc---ttttgataggtttgttgcttgcaa 1151201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 25340256 - 25340169
Alignment:
Q  335 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||| |||||||||||||  |||| |  || |||||||| || |||||||| |||||||||| |||||||||||||| || |||||||    
T  25340256 ttttttattcaataaaatttatcgacaacttttctcaattatgatggattccagaaaccctta-tttgataggtttgttgcgtgcaacc 25340169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 29924935 - 29924879
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29924935 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29924879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 29974088 - 29974032
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29974088 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 14147070 - 14147012
Alignment:
Q  11 tatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    ||||||||| |  ||||||||| |||||||||||| || |||||||||||| |||||||    
T  14147070 tatccatgacccatgagatgtggtcatcagtctacatatataatagtctctgtgcttta 14147012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 508
Target Start/End: Original strand, 33175835 - 33175922
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtc 508  Q
    ||||||||||||| |||||||||  |||||||||||| ||||||| || ||||||||  | ||||| | |||||||||||| ||||||||    
T  33175835 aaccctattttcataagtttgtcctttgcaaacttgtctcttttcaatataggtttatcgtttgct-agcctacgcttccg-actgcgtc 33175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 478 - 506
Target Start/End: Original strand, 53013020 - 53013048
Alignment:
Q  478 gcttgctaaccctacgcttccgtactgcg 506  Q
    |||||||||||||||||||||||||||||    
T  53013020 gcttgctaaccctacgcttccgtactgcg 53013048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 236; Significance: 1e-130; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 2289 - 2528
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2289 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 2388  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2389 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 2488  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2489 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11180 - 11419
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11180 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 11279  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11280 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 11379  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11380 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 11419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 2564 - 2621
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2564 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 11455 - 11512
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11455 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19926728 - 19926967
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19926728 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 19926827  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926828 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 19926927  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19926928 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 19926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26970702 - 26970463
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  26970702 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgact 26970603  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970602 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 26970503  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26970502 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 26970463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 55612922 - 55612683
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  55612922 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 55612823  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612822 acggatactttgagagtagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 55612723  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55612722 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 55612683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5707559 - 5707320
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  5707559 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgact 5707460  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5707459 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttat 5707360  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5707359 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 5707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26963879 - 26963640
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  26963879 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgact 26963780  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26963779 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatatttaatgttccattaaacggactaactattctagggactttat 26963680  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26963679 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 26963640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18262451 - 18262214
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18262451 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgact 18262352  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262351 acggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 18262252  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  18262251 tattttgaaacgaaacaaaatcaataaagaaatgcctt 18262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 868836 - 868597
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868836 gataactttttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 868737  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  868736 acggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttat 868637  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  868636 tattttgaaacaaaacaaaatcaataaagaaatgtcttgt 868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5714187 - 5713948
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  5714187 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgact 5714088  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  5714087 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatgggctaactattctagggactttat 5713988  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5713987 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 5713948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 10621301 - 10621540
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10621301 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 10621400  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10621401 acagatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttat 10621500  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10621501 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 10621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 10628380 - 10628619
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  10628380 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaataatatcccacttctcaataaagcttgact 10628479  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10628480 acagatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttat 10628579  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10628580 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 10628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18269312 - 18269070
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18269312 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgact 18269213  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269212 acggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 18269113  T
Q  201 tattttgaaacaaaac-----aaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||     ||||||||||||||||||||||    
T  18269112 tattttgaaacaaaacaaaacaaaatcaataaagaaatgcctt 18269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4426572 - 4426808
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4426572 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 4426671  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4426672 acggatactttaagaatagtt-ccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttat 4426770  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4426771 tattttgaaacaaaacaaaatcaataaagaaatgcctt 4426808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 28393102 - 28393339
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28393102 gataactctttatccatgatatgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 28393201  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28393202 acagatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttat 28393301  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28393302 tattttgaaacaaatcaaaatcaataaagaaatgcctt 28393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 8845442 - 8845215
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8845442 gataactctttatccatgatctgtgagatgtgatcatcagcctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgact 8845343  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8845342 acggatactttaagaatagtttccttatgtttaacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 8845243  T
Q  201 tattttgaaacaaaacaaaatcaataaa 228  Q
    ||||||||||||||||||||||||||||    
T  8845242 tattttgaaacaaaacaaaatcaataaa 8845215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 8858406 - 8858179
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8858406 gataactctttatccatgatctgtgagatgtgatcatcagcctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgact 8858307  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858306 acggatactttaagaatagtttccttatgtttaacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 8858207  T
Q  201 tattttgaaacaaaacaaaatcaataaa 228  Q
    ||||||||||||||||||||||||||||    
T  8858206 tattttgaaacaaaacaaaatcaataaa 8858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 331 - 510
Target Start/End: Complemental strand, 6659508 - 6659330
Alignment:
Q  331 caactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatttt 430  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6659508 caactttttgattcactaaaactattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatttt 6659409  T
Q  431 cacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||||||||||||||||    
T  6659408 cacaagtttgtcgcttgcaaacttgttcttttctatctagatttagcgcttgctaa-cctacacttccgtactgcgtcag 6659330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 20311531 - 20311299
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||  ||| |||||||||||| |||||| ||| |||||||||||||||||||||||||| |||||| ||| ||||||||||     
T  20311531 gataactctttatccatgatccatgatatgtgatcatcaatctacccacaaaatagtctctatgctttaatgatatctcacttcacaataaagcttgaca 20311432  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttata-cttaatgttccattaaacggactaactattctagggacttta 199  Q
    ||  ||||||| | || ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||  | |||||||| || | ||||||    
T  20311431 acaaatactttaaaaacagtgtccttatgtttaatggggtctcacaattaagttataccttaatgctccattgaacatattaactattataagtacttta 20311332  T
Q  200 ttattttgaaacaaaacaaaatcaataaagaaa 232  Q
    ||||||| |||||||||||||||||||||||||    
T  20311331 ttattttaaaacaaaacaaaatcaataaagaaa 20311299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 12357251 - 12357136
Alignment:
Q  125 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357251 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 12357152  T
Q  225 taaagaaatgccttgt 240  Q
    ||||||||||||||||    
T  12357151 taaagaaatgccttgt 12357136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 35223799 - 35223576
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||   ||  ||| |||||||||||    
T  35223799 gataactctttatctatgatccgtgagatgtgatcatccgtctacccacataatagtctatatgctttaatgttatccttttttacaataaagcttgact 35223700  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||| ||||||| |||||| | |||||  |||          | || ||||||| | |||||||| |||||||||| |||||| |||||||||||||||||    
T  35223699 acgaatactttaagaataatgtcctttcgtt----------ttacgattaagtcacacttaatgctccattaaacagactaattattctagggactttat 35223610  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    |||||| ||||||||||||||||| |||||||||    
T  35223609 tattttaaaacaaaacaaaatcaacaaagaaatg 35223576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 10677538 - 10677753
Alignment:
Q  16 atgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgaga 115  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||| |||| || ||| | |  ||||||||||||||||||||| |||    
T  10677538 atgatccgtgagatgtgatcatcagtctacccacataatagtctatatactttaatgttatctcatttcacta--aagcttgactacggatactttaaga 10677635  T
Q  116 atagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaa 215  Q
    ||| | || ||  |||||||||| |||| | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | |||||||||||    
T  10677636 ataatatcatttcgtttaatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaa 10677734  T
Q  216 caaaatcaataaagaaatg 234  Q
     |||||||||||| |||||    
T  10677735 gaaaatcaataaaaaaatg 10677753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 10891178 - 10891393
Alignment:
Q  16 atgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgaga 115  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||| |||| || ||| | |  ||||||||||||||||||||| |||    
T  10891178 atgatccgtgagatgtgatcatcagtctacccacataatagtctatatactttaatgttatctcatttcacta--aagcttgactacggatactttaaga 10891275  T
Q  116 atagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaa 215  Q
    ||| | || ||  |||||||||| |||| | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | |||||||||||    
T  10891276 ataatatcatttcgtttaatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaa 10891374  T
Q  216 caaaatcaataaagaaatg 234  Q
     |||||||||||| |||||    
T  10891375 gaaaatcaataaaaaaatg 10891393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 5668095 - 5668327
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||| |||||| ||||||||  |||||| ||||| | ||||||||||||||||| ||||||| |||| |  ||| ||| |||||||||||    
T  5668095 gataactctttatctatgatccgtgagatg--atcatcggtctatccacataatagtctctatgatttaatgttatctcttttcacaataaagcttgact 5668192  T
Q  101 acggata--ctttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggacttt 198  Q
    ||  |||  |||| |||||| | |||||   ||||||||| |||||| ||||| | | |||||||| |||||||||  |||||| |||||||| ||||||    
T  5668193 acaaatatactttaagaataatgtcctttcatttaatggg-tctcacgattaaatcacacttaatgctccattaaatagactaattattctagagacttt 5668291  T
Q  199 attattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    |||||||||||||||||||||||||| |||||||||    
T  5668292 attattttgaaacaaaacaaaatcaacaaagaaatg 5668327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 333 - 423
Target Start/End: Complemental strand, 13085268 - 13085178
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13085268 acttttttattcaataaaattattcgagattttctctcaattttggtggattccgaaaacccttattttgataggtttgtcgcttgcaacc 13085178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 24 - 238
Target Start/End: Complemental strand, 5616431 - 5616215
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagc--ttgactacggatactttgagaatagtt 121  Q
    ||||||||| |||||| ||||| |||||||||||||| |||||||| | |||||||| |||  || ||| |  ||||| ||||||||||| |||||| |     
T  5616431 tgagatgtggtcatcaatctacatacataatagtctcaatgctttattaatatcccaattcataataaaacctttgacaacggatactttaagaataatg 5616332  T
Q  122 tccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 221  Q
    ||||   |||||| ||| |||||  ||| ||| | |||||||||||||  |||  |||||| |||| |||| ||||||||||||||||||||||||||||    
T  5616331 tcctctagtttaacgggatctcatgatttagtcagacttaatgttccaagaaatagactaattattttaggaactttattattttgaaacaaaacaaaat 5616232  T
Q  222 caataaagaaatgcctt 238  Q
     ||||||||||||||||    
T  5616231 gaataaagaaatgcctt 5616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 333 - 423
Target Start/End: Complemental strand, 13086311 - 13086221
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||| | |||| |||||||||||||||||||||||| |||||    
T  13086311 actttttaattcaataaaattattcgagattttctctcaattctaatggattctgaaaactcttattttgataggtttgtcgcttacaacc 13086221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 22716590 - 22716661
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22716590 tattcgagacttttctctcaattctggtggattccggaaaccctttttttgataggtttgtcgcttgcaacc 22716661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 5713912 - 5713855
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713912 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 5713855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 26963604 - 26963547
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963604 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 26963547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 26970427 - 26970370
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970427 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 26970370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 19927003 - 19927059
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927003 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 19927059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 22691253 - 22691312
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22691253 ttttctctcaattctggtggattccggaaacccttatttcgataggtttgtcgcttgcaa 22691312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 22988627 - 22988556
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22988627 tattcgagacttttctctcaattctggtggattccggaaacccttttttcgataggtttgtcgcttgcaacc 22988556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 56516295 - 56516094
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||| ||||||  ||||    ||| ||| |||||||||||    
T  56516295 gataactctttatccattatctgtgagatttgatcattaatctacctacataatagtctctatgttttaatactatcgttattcacaataaagcttgact 56516196  T
Q  101 acggatactttgagaatagt-ttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggacttta 199  Q
    |  |||||||  |||||| | |||  |||| ||||||  ||||||||||||||| | | |||||||| |||||  |  || | |||||||| ||||||||    
T  56516195 atagatacttcaagaataatgttctatatg-ttaatgaagtctcacaattaagtcacaattaatgtttcattactctaaccatctattctaaggacttta 56516097  T
Q  200 tta 202  Q
    |||    
T  56516096 tta 56516094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 10621576 - 10621633
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10621576 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 10621633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 5707284 - 5707228
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5707284 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 5707228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 420 - 508
Target Start/End: Complemental strand, 7723751 - 7723665
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtc 508  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||| | |||||||||| ||||||||||    
T  7723751 aaccctattttcacaagtttgtagcttgcaaacttgttcttttcaatcta-gtttagcgcttgct-agcctacgcttctgtactgcgtc 7723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 12357100 - 12357044
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12357100 catgatacaaagccaaatccaatcaatatagattggctattagggcttattccaaca 12357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 868561 - 868507
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  868561 catgatacaaagccaaacccaatcaatatagattggctattagggtttattccaa 868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 524
Target Start/End: Complemental strand, 13991468 - 13991365
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    |||| ||||||| || |||||||||||||||||||| |||||||| |||||| ||||| ||||||| | |||||||||||| ||||||||||||||||||    
T  13991468 aaccttattttcgcatgtttgtcgcttgcaaacttgtttcttttcaatctagatttagcgcttgct-agcctacgcttccg-actgcgtcagttggtatc 13991371  T
Q  519 agagca 524  Q
    | ||||    
T  13991370 aaagca 13991365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 10628655 - 10628711
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10628655 catgatacaaagtcaaaaccaatcaatatagattggctattagggcttattccaaca 10628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 17142372 - 17142428
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  17142372 catgatacaaagtcaaacccaatcaatatagattggctattagggctttttccaaca 17142428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 55612650 - 55612594
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  55612650 catgatacaaagccaaacccaatcaatatagattggttattagggcttattctaaca 55612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 54700686 - 54700577
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||| || ||||||||| | ||||| | ||||| ||  || ||||||||||||||||||    
T  54700686 aaccctattctcacaagtttgtcacttgcaaacttgtttcttttcaatataggtttagcgtttgct-agcctacactctcg-actgcgtcagttggtatc 54700589  T
Q  519 agagcaggtttc 530  Q
    ||||||||||||    
T  54700588 agagcaggtttc 54700577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 2053176 - 2053095
Alignment:
Q  341 attcaataaaattattcgagattttctc-tcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    ||||||||||||||||||||| ||| || |||||||| ||||||| |||||||||||| |||||||| |||||||||||||||    
T  2053176 attcaataaaattattcgagactttttcctcaattctagtggatttcggaaaccctta-tttgatagatttgtcgcttgcaac 2053095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 510
Target Start/End: Original strand, 24667657 - 24667746
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    |||||||||||||||||||||| || ||| | ||| ||||||||||||||||||||  ||||||| | ||||||||||| |||||||||||    
T  24667657 aaccctattttcacaagtttgttgcctgcgagcttcttcttttctatctaggtttaacgcttgct-agcctacgcttccatactgcgtcag 24667746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 28393380 - 28393434
Alignment:
Q  278 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  28393380 tgatacaaagtcaaacccaatcaatatagattggctattagggcttactccaaca 28393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 18269032 - 18268975
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  18269032 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaacaa 18268975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 4426847 - 4426903
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  4426847 catgatacagagccaaacccaatcaatatagattggctattaggacttactccaaca 4426903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 9596853 - 9596944
Alignment:
Q  332 aactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||||||| ||||||||| | |||| |||| |||||||||||||||||||||||  ||||||||||| |||||||||||| ||| ||||||||    
T  9596853 aactttttcattcaataagaatatttgagacttttctctcaattctggtggattatggaaaccctta-tttgataggtttatcgtttgcaacc 9596944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 19935487 - 19935575
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||| |||||||||||||||||| || || ||||||||||  |||||| ||| ||| | |||||||||| |||||||||||    
T  19935487 aaccctattttcataagtttgtcgcttgcaaatttatttttttctatctgagtttagcgctggct-agcctacgcttctgtactgcgtca 19935575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 419
Target Start/End: Original strand, 4053062 - 4053145
Alignment:
Q  336 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgc 419  Q
    |||| ||||||||||| ||||||||| ||||||||||||| ||||||||| || ||| |||||  ||||||||||||||||||||    
T  4053062 ttttcattcaataaaaatattcgagacttttctctcaattatggtggatttcgaaaatcctta-cttgataggtttgtcgcttgc 4053145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 214
Target Start/End: Original strand, 21454135 - 21454319
Alignment:
Q  31 tgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgt 130  Q
    ||||||||| |||||  |||||||| ||| ||||| ||| || |||| || ||| ||| |||| |||||||  |||| ||| | |||| | || ||||      
T  21454135 tgatcatcaatctactcacataataatctttatgcattattgttatctcatttcacaataaagtttgactatagatattttaaaaataatgtcattataa 21454234  T
Q  131 ttaatggggtctcacaattaagttatactt-aatgttccattaaacggactaactattctagggactttattattttgaaacaaa 214  Q
    ||||||||||||||  ||||||| | | || ||||||||||||| |  ||||||||||||| | ||||||||| |||||||||||    
T  21454235 ttaatggggtctcaatattaagtcacattttaatgttccattaatcaaactaactattctaagaactttattactttgaaacaaa 21454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 39074278 - 39074346
Alignment:
Q  124 cttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctag 191  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||||||    
T  39074278 cttatgtttaatggggtctcatgattaagtcatacttaatgttcaatttaaacggactaattattctag 39074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 424 - 510
Target Start/End: Original strand, 40206153 - 40206238
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    ||||||||||||||||||||||||| |||||||   |||| || ||| ||||| ||||||| | |||||||||||||| ||||||||    
T  40206153 ctattttcacaagtttgtcgcttgcgaacttgtctctttcaatttagatttagcgcttgct-agcctacgcttccgtagtgcgtcag 40206238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 476
Target Start/End: Complemental strand, 21433652 - 21433595
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttag 476  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||    
T  21433652 aaccctattttcataagtttgtcgcttgcgaatttgttctttttctatctaggtttag 21433595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 55992729 - 55992680
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttat 325  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  55992729 catgatacaaagtcaaacccaatcaatacaaattggctattagggcttat 55992680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 476
Target Start/End: Complemental strand, 18689613 - 18689553
Alignment:
Q  417 tgcaaccctattttcacaagtttgtcgcttgcaaac-ttgttcttttctatctaggtttag 476  Q
    |||||||||||||| ||||||||||||| ||||||| || |||||||| ||||||||||||    
T  18689613 tgcaaccctatttttacaagtttgtcgcatgcaaacttttttcttttcaatctaggtttag 18689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 475
Target Start/End: Complemental strand, 38888079 - 38888023
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 475  Q
    |||||||||||||||||||||||||||||||| ||| || ||||| |||||||||||    
T  38888079 aaccctattttcacaagtttgtcgcttgcaaatttgtttattttcaatctaggttta 38888023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 39074190 - 39074270
Alignment:
Q  23 gtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacg 103  Q
    |||||||||||||| || || ||| || |||||||||| |||||||||||||||| |||||| ||| ||||  ||||||||    
T  39074190 gtgagatgtgatcaacaatcaacccacgtaatagtctccatgctttaatgatatctcacttcacaataaagtatgactacg 39074270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 530
Target Start/End: Original strand, 7634084 - 7634189
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagag 522  Q
    |||||| ||||||||| ||| ||||||||||||| |||||| |||||||||||  |||| || | | |||||||| | |||||||||||||||| |||||    
T  7634084 ctatttccacaagtttatcgtttgcaaacttgttccttttcaatctaggtttaacgcttact-agcatacgcttctg-actgcgtcagttggtaacagag 7634181  T
Q  523 caggtttc 530  Q
     |||||||    
T  7634182 taggtttc 7634189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 10494907 - 10494966
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttg 482  Q
    ||||||||||| ||||||| |||||||||||| |||||||| |||||||||| |||||||    
T  10494907 ctattttcacaggtttgtcacttgcaaacttgtttcttttccatctaggtttggtgcttg 10494966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 22486861 - 22486799
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||||||| |||||||||||||||| || |||||||| ||||||||| ||||||||    
T  22486861 cctattttcacaagtt-gtcgcttgcaaacttggtctttttctatataggtttagcgcttgcta 22486799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 418
Target Start/End: Original strand, 54239531 - 54239604
Alignment:
Q  343 tcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttg 418  Q
    ||||||||||||| |||||  || |||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  54239531 tcaataaaattat-cgagaacttttctcaattttggtggattccgaaaaccctta-tttgataggtttgtcccttg 54239604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 9937933 - 9938015
Alignment:
Q  2 ataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttc 84  Q
    |||||||||||| |||||| | |||||||||||||| | |||||| ||| |||||||| |||||||  ||| |||| ||||||    
T  9937933 ataactctttattcatgatttatgagatgtgatcatgactctacccacacaatagtctatatgcttcgatgctatctcacttc 9938015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 18657128 - 18657070
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaac-ttgttcttttctatctaggtttagtgct 480  Q
    |||||||| ||||||||||||| ||||||| || |||||||| ||||||||||||||||    
T  18657128 cctatttttacaagtttgtcgcatgcaaacttttttcttttcaatctaggtttagtgct 18657070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 24700263 - 24700213
Alignment:
Q  6 ctctttatccatgatctgtgagatgtgatcatcagtctacctacataatag 56  Q
    ||||||||||| ||||||| ||||||||| ||||||||||| |||||||||    
T  24700263 ctctttatccaagatctgtaagatgtgattatcagtctacccacataatag 24700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 5668371 - 5668412
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctatta 317  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  5668371 catgatacaaaaccaaacacaatcaatatagattggctatta 5668412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 420
Target Start/End: Complemental strand, 38223200 - 38223117
Alignment:
Q  335 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 420  Q
    ||||| ||||||||||| |  |||||| ||| |||||||||| |||||||| | ||||||||| |||||||||||||||| |||||    
T  38223200 tttttcattcaataaaaattatcgagacttt-tctcaattctagtggattctgtaaaccctta-tttgataggtttgtcgtttgca 38223117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 8845166 - 8845118
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggctta 324  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8845166 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 8858130 - 8858082
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggctta 324  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8858130 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 18262176 - 18262136
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctatt 316  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  18262176 catgatacaaagccaaacccattcaacatagattggctatt 18262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 30040740 - 30040919
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatac-tttgagaatagt-t 121  Q
    ||||||||| |||||||||||  |||||||||||||| |||||||| |  ||||||| |||  |  || |||||||||  ||||| ||| |||||||| |    
T  30040740 tgagatgtggtcatcagtctatatacataatagtctcgatgctttattattatcccaattcatattaacgcttgactatagatacatttaagaatagtgt 30040839  T
Q  122 tccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 202  Q
    || ||||| ||||||   |||||  ||||||| | ||||||| | | |||| ||| |||| |||||||||| |||||||||    
T  30040840 tctttatg-ttaatgtaatctcatgattaagtcacacttaatatactattacacgaactatctattctaggaactttatta 30040919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 417
Target Start/End: Complemental strand, 34949169 - 34949082
Alignment:
Q  330 acaactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgctt 417  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||| || |||||||| | ||||||| || ||| |||||||| ||||||    
T  34949169 acaactattttattcaataaaaatattcgagacttttctctcaaatcgggtggatttcagaaaccc-taatttaataggtttatcgctt 34949082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 11161913 - 11161972
Alignment:
Q  131 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 190  Q
    ||||||| ||||||||||||||| | ||||  ||||||||||||| || |||||||||||    
T  11161913 ttaatggagtctcacaattaagtcacactttgtgttccattaaactgattaactattcta 11161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 19684880 - 19684822
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    |||||||||||||||  || |||| |||||||||| ||| ||||||||||||||||||||    
T  19684880 ttttctctcaattctattgaattctggaaacccttgttt-gataggtttgtcgcttgcaa 19684822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Complemental strand, 50515978 - 50515947
Alignment:
Q  426 attttcacaagtttgtcgcttgcaaacttgtt 457  Q
    ||||||||||||||||||||||||||||||||    
T  50515978 attttcacaagtttgtcgcttgcaaacttgtt 50515947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 20311261 - 20311207
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 330  Q
    ||||||||||||||||| ||||| |||| |||||||||||||  ||||| |||||    
T  20311261 catgatacaaagccaaatccaatgaatacagattggctattacagcttactccaa 20311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 457
Target Start/End: Original strand, 9260573 - 9260610
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgtt 457  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  9260573 aaccctattttcgcaagtttgtcgtttgcaaacttgtt 9260610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 11421052 - 11421007
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    ||||||||| |||||||||||| |||||||||||||| | ||||||    
T  11421052 tgagatgtggtcatcagtctacatacataatagtctcgaagcttta 11421007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 457
Target Start/End: Complemental strand, 13990766 - 13990729
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgtt 457  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  13990766 aaccctattttcacaagtttgttacttgcaaacttgtt 13990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 18163198 - 18163153
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    ||||||| |||||||||||||| |||||||||||||| | ||||||    
T  18163198 tgagatgcgatcatcagtctacatacataatagtctcgacgcttta 18163153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 499
Target Start/End: Complemental strand, 17254968 - 17254893
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    |||||||||||||||||||||||| ||| |||||| | ||| ||||| |||||| | ||||| | ||||||||||||    
T  17254968 ctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcgtttgct-agcctacgcttccg 17254893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 24700006 - 24699958
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggctta 324  Q
    ||||||||||| |||||  ||||||||||||||||| |||| |||||||    
T  24700006 catgatacaaaaccaaattcaatcaatatagattggttattcgggctta 24699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 512
Target Start/End: Complemental strand, 55139163 - 55139096
Alignment:
Q  444 cttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagtt 512  Q
    |||||||| |||||  |||| |||||||||||  ||||||||| ||||| ||||||| |||||||||||    
T  55139163 cttgcaaatttgtttatttcaatctaggtttaacgcttgctaa-cctacacttccgtgctgcgtcagtt 55139096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 18252269 - 18252030
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18252269 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 18252170  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252169 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 18252070  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18252069 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 18252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18532482 - 18532721
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532482 gataactctttatccatgatctgtgagatgtgatcatcagtctatctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 18532581  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18532582 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgaactaactattctagggactttat 18532681  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18532682 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 18532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 27131377 - 27131616
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27131377 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgact 27131476  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131477 acaaatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 27131576  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27131577 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 27131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 21171201 - 21171438
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  21171201 gataactctttatccatgatctgtgagatgttatcatcagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgact 21171300  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  21171301 acggatactttaagaatagtttccttatgttcaacggggtctcacaattaagttatatttaatgttccatgaaacggactaactattctaaggactttat 21171400  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21171401 tattttgaaacaaaacaaaatcaataaagaaatgcctt 21171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 27310545 - 27310782
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27310545 gataactctttatccataatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatattccacttctcaataaagcttgact 27310644  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27310645 actgatactttaagaatagtttccttatgttcaacgtggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttat 27310744  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27310745 tattttgaaacaaaacaaaatcaataaagaaatgcctt 27310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16359003 - 16359240
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  16359003 gataactctttatccattatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatattccatttctcaataaagcttgact 16359102  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    | || |||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  16359103 agggttactttaagaatagtttccttatgtttaacggggtctcacaattaagttattcttaatgttccattaaacagactaactattctagggactttat 16359202  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16359203 tattttgaaacaaaacaaaatcaataaagaaatgcctt 16359240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 36816601 - 36816834
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  36816601 gataactctttatccatgatctgtgagatgtgatcatcagtctatccacataatagtctctatgctttaatggtatcccacttctcaataaagcttgact 36816700  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    | ||||||||| |||||| | ||||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  36816701 atggatactttaagaataatgtccttatgtttaacggagtctcacaattaatttatacttaatgttccattaaacagacgaactattctagggacttcat 36816800  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||||||||||||||||||||||    
T  36816801 tattttgaaacaaaacaaaatcaataaagaaatg 36816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 3855888 - 3856126
Alignment:
Q  2 ataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgacta 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||| ||| |||| |||||||    
T  3855888 ataactctttatccatgatttgtgagatgtgatcatcagtctacccacgtaatagtctccatgctttaataatatcccacttcacaataaagtttgacta 3855987  T
Q  102 cggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatt 201  Q
    |  ||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  3855988 caaatattttaagaataatgtccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgggctaactattctagggactttgtt 3856087  T
Q  202 attttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||| || |||||||||||||||    
T  3856088 attttgaaacaaaacaaaataaacaaagaaatgccttgt 3856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 333 - 509
Target Start/End: Complemental strand, 50857620 - 50857444
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50857620 actttttgatacaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 50857521  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50857520 caagtttgtcgcttacaaacttattcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 50857444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 362 - 529
Target Start/End: Complemental strand, 13444135 - 13443968
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 461  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13444135 ttttctctcaattctggtggattacggaaacccttattttgatatgtttgtcgcttgcaatcctattttcacaagtttgtcgcttgcaaacttgttcttt 13444036  T
Q  462 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggttt 529  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  13444035 tctatctaggtttagtgcttgttaaccctatgcttccgaactgcgtcagttggtatcagagcaggttt 13443968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 22657190 - 22657429
Alignment:
Q  2 ataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgacta 101  Q
    ||||||||||||| |||| || ||||||||||||||||||||| | |||| ||||||||||||||||||||||||| || |||  || ||||||||||||    
T  22657190 ataactctttatctatgagctatgagatgtgatcatcagtctatccacatgatagtctctatgctttaatgatatctcatttcagaataaagcttgacta 22657289  T
Q  102 cggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatt 201  Q
      || ||||| ||||| || ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  22657290 gagacactttaagaattgtgtccttatgtttaaaggggtctcacaattaagttatatttaatgttccattaaacagactaactattctaggaactttatt 22657389  T
Q  202 attttgaaacaaaac-aaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  22657390 attttgaaacaaaacaaaaatcaataaagaaatgtcttgt 22657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 353 - 509
Target Start/End: Original strand, 8931153 - 8931309
Alignment:
Q  353 tattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8931153 tattcgagattttctctcaatttctggtggattccggaa-cccttatattgataggtttgtcgcttgcaaccctattttcacaagtttatcgcttgcaaa 8931251  T
Q  452 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  8931252 cttgtttttttcaatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 8931309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 27277525 - 27277756
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||  ||| ||| ||||| |||||    
T  27277525 gataactctttatctatgatccgtgagatgtgatcatcggtctacccacataatagtctctatgctttaatgttatcccttttcacaataaagcctgact 27277624  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| |||||| | || ||  | ||||   |||||| | ||||||| | || ||||| ||| ||||| ||||||| |||||||||||| ||||    
T  27277625 acggatactttaagaataatgtcatttcggttaa-aaggtctcgcgattaagtcacac-taatgctccgttaaatggactaattattctagggacgttat 27277722  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    |||||||||||||||||||| ||| |||||||||    
T  27277723 tattttgaaacaaaacaaaaacaacaaagaaatg 27277756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12014252 - 12014457
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||| ||||| |||||| ||||||||||||||||| |||||| ||||||| |||| || ||||||||  |||||| |||| ||  ||||||| |||    
T  12014252 gataactccttatcaatgatccgtgagatgtgatcatcattctacccacataatggtctttacgctttaatcgtatccctcttcacactaaagcttaact 12014351  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||  ||| ||||||   || |||||||||||||| ||| || ||||| ||| ||||||| |||||||||||||||||  |||||||| ||||||||    
T  12014352 acggatgttttaagaataacatcattatgtttaatgggatctaacgattaatttacacttaatattccattaaacggactatgtattctagtgactttat 12014451  T
Q  201 tatttt 206  Q
    ||||||    
T  12014452 tatttt 12014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 362 - 503
Target Start/End: Complemental strand, 13441746 - 13441612
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 461  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||       |||||||||| |||||||||    
T  13441746 ttttctctcaattctgatggattccggaaatccttattttaataggtttttcgcttgcaaccctattttcaca-------cgcttgcaaaattgttcttt 13441654  T
Q  462 tctatctaggtttagtgcttgctaaccctacgcttccgtact 503  Q
    |||||||| |||||| ||||||||||| ||| ||||||||||    
T  13441653 tctatctaagtttagcgcttgctaaccatactcttccgtact 13441612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12006507 - 12006712
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||| ||||| |||||  || || ||||||||||||||||   |||||| | |||||| | ||||||| |||||| |||| ||  || ||||||||    
T  12006507 gataactccttatcaatgattcgtaagttgtgatcatcagtctatgcacataacaatctctaagttttaatgttatccctcttcacactaaggcttgact 12006606  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||| ||  ||| | |||| | ||||||||||| |||||||||||| ||||||  | ||||||| ||||||||||  ||||||||||||||||||||||||    
T  12006607 acgaatgttttaataataatgtccttatgtttcatggggtctcacgattaaggcacacttaatattccattaaatagactaactattctagggactttat 12006706  T
Q  201 tatttt 206  Q
    ||||||    
T  12006707 tatttt 12006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 9917886 - 9918106
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||   |||||||||||||||  ||||| ||||| || ||||||||||| |||| ||||||||||  ||| ||||||| |||    
T  9917886 gataactctttatccatgatccacgagatgtgatcatcaacctaccgacatagtattctctatgcttcaatgctatcccacttaacaataaagcttaact 9917985  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |  |||| ||| |||||| | ||||||| ||||||||  ||||   || |||||||||||||||||| |||||||  |||||       || ||||||||    
T  9917986 atagatattttaagaataatgtccttatatttaatgga-tctcgtgatcaagttatacttaatgttcgattaaacaaactaa------aagtgactttat 9918078  T
Q  201 tattttgaaacaaaacaaaatcaataaa 228  Q
    ||||||| ||||||||||||||||||||    
T  9918079 tattttgtaacaaaacaaaatcaataaa 9918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 28660835 - 28660727
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||| | |||||||||||| ||| ||||||||||||||    
T  28660835 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttatctatctaggtttagcgtttgct-atcctacgcttccg-actacgtcagttggtatc 28660738  T
Q  519 agagcaggttt 529  Q
    |||| ||||||    
T  28660737 agagtaggttt 28660727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 425 - 530
Target Start/End: Original strand, 23987581 - 23987686
Alignment:
Q  425 tattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 523  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||||| || ||||||| |||||||||||||| | ||||||||||||||| | |||    
T  23987581 tattttcacaagtttgtcgtttgcaaagttgttctttttctatctaggttcagcgcttgct-accctacgcttccgaattgcgtcagttggtattaaagc 23987679  T
Q  524 aggtttc 530  Q
    |||||||    
T  23987680 aggtttc 23987686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 18251992 - 18251936
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251992 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 18532757 - 18532813
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532757 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18532813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 342 - 421
Target Start/End: Complemental strand, 12486392 - 12486314
Alignment:
Q  342 ttcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||| ||||||||    
T  12486392 ttcaataaaattattcgagattttctctcaattttggtggattccgaaaaccctta-tttaataggtttgttgcttgcaa 12486314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 31915550 - 31915638
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||||||||||||||||||||||  |||| | ||| |||||||||||||| | ||| |||||||||||| |||||    
T  31915550 aaccctattttcacaagtttgtcgcttgcaaacttgtttctttcaacctaagtttagtgcttgct-agcctgcgcttccgtactacgtca 31915638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 27310821 - 27310877
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27310821 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 27310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 40804571 - 40804660
Alignment:
Q  331 caactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    ||||||||| ||||||||| || |||||||| |||||||||||||||||||||||  |||||||| || |||||||||||||||||||||||    
T  40804571 caactttttcattcaataatat-attcgagacttttctctcaattctggtggattttggaaacccgta-tttgataggtttgtcgcttgcaa 40804660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 418
Target Start/End: Complemental strand, 42071489 - 42071413
Alignment:
Q  341 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttg 418  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| ||||| |||| ||||||||||||||| ||||    
T  42071489 attcaataaaattattcgagattctctctcaattatgatggattccagaaacgctta-tttgataggtttgtcacttg 42071413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 16359280 - 16359336
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||    
T  16359280 catgatacaaatcctaacccaatcaatatagattggctattagggcttactccaaca 16359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23507139 - 23507056
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttc 84  Q
    |||||||| |||||||||||| |||||||||||||||||||||| | || | ||| ||| ||| |||||||| |||||||||||    
T  23507139 gataactccttatccatgatccgtgagatgtgatcatcagtctatccaccttatattctatatactttaatgctatcccacttc 23507056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 427 - 509
Target Start/End: Complemental strand, 40058184 - 40058102
Alignment:
Q  427 ttttcacaagtttgtcgcttgcaaactt-gttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||||| |||||||| | ||||||||||||||| ||||||    
T  40058184 ttttcataagtttgtcgcttgcaaacttatttcttttctatttaggtttactgcttgct-agcctacgcttccgtaccgcgtca 40058102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 21171479 - 21171536
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||    
T  21171479 catgatacaaagccaaactcaatccatatagattggctattagagcttactccaacaa 21171536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 10925740 - 10925846
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 519  Q
    |||| |||||| |||||||||||||||||||| ||||  ||||| || ||||||||| ||||||| | ||| |||||||| |||||||| ||| ||||||    
T  10925740 aaccatatttttacaagtttgtcgcttgcaaaattgt--ttttcaatttaggtttagcgcttgct-agcctccgcttccg-actgcgtctgttagtatca 10925835  T
Q  520 gagcaggtttc 530  Q
     ||||||||||    
T  10925836 aagcaggtttc 10925846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 3856164 - 3856222
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaac 334  Q
    |||||||||||| ||||||||||||| || |||||||||||||||| || |||||||||    
T  3856164 catgatacaaagtcaaacccaatcaagatggattggctattagggcctactccaacaac 3856222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 12944116 - 12944182
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||| |||||| ||||| ||||||||    
T  12944116 aaccctatttttacaagtttgtcgtttgcaaacttgtttcttttcaatctagatttagcgcttgcta 12944182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 31913380 - 31913442
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||| ||||||||||||||||||||||||||  |||| | |||||||||| ||||||||    
T  31913380 cctatttttacaagtttgtcgcttgcaaacttgtttctttcaacctaggtttagcgcttgcta 31913442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 36816881 - 36816935
Alignment:
Q  279 gatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||    
T  36816881 gatacaaagccaaacccaatcaatatagattgaatattagggcttaatccgacaa 36816935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 12033730 - 12033638
Alignment:
Q  330 acaactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    |||||||||| ||| ||||||| ||||||||| |||||||||||||||  ||||||  | ||||||| |||| |||| ||||||||||||||||    
T  12033730 acaacttttttatttaataaaaatattcgagacttttctctcaattctaatggattatgtaaaccctcattt-gataagtttgtcgcttgcaac 12033638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 22657469 - 22657522
Alignment:
Q  280 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||    
T  22657469 atacaaagccaaactcaatcaatatatattggctattaaggcttactccaacaa 22657522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 30720625 - 30720694
Alignment:
Q  165 ttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    |||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| |||| ||||||| |||||    
T  30720625 ttccattaaacgaactaattattccaggaactttattattttaaaacaaaataaaaccaataaaaaaatg 30720694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 476
Target Start/End: Original strand, 50713713 - 50713770
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttag 476  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||    
T  50713713 aaccctattttcacaagtttgtcgcctgcgaacttgtctcttttcaatctaggtttag 50713770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 43681465 - 43681528
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttg--ttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||| |||||||||||||||||||  || ||||| |||||||||||| ||||||||    
T  43681465 ctattttcacaaatttgtcgcttgcaaacttgtttttttttcaatctaggtttagcgcttgcta 43681528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 462
Target Start/End: Original strand, 10927199 - 10927234
Alignment:
Q  427 ttttcacaagtttgtcgcttgcaaacttgttctttt 462  Q
    ||||||||||||||||||||||||||||||||||||    
T  10927199 ttttcacaagtttgtcgcttgcaaacttgttctttt 10927234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 27131652 - 27131704
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||||||||    
T  27131652 catgatacaaagccaaacccaac----atagattggctattagggcttattccaaca 27131704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 3403325 - 3403248
Alignment:
Q  133 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 210  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3403325 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3403248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 3443494 - 3443571
Alignment:
Q  133 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 210  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3443494 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3443571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 9031016 - 9031096
Alignment:
Q  419 caaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    |||||||||||||| |||||| | |||||||||||| || |||||| || |||||||||| |||||| | ||||||||||||    
T  9031016 caaccctattttcataagtttattgcttgcaaacttattccttttcaatataggtttagtacttgct-agcctacgcttccg 9031096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 27277800 - 27277856
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||| |||||  ||| || |||||||||||||||||||||| |||||||    
T  27277800 catgatacaaagtcaaacataattaacatagattggctattagggcttactccaaca 27277856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 420
Target Start/End: Original strand, 42646624 - 42646674
Alignment:
Q  369 tcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 420  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||| |||||    
T  42646624 tcaattttggtggattctggaaaccctta-tttgataggtttgtcgtttgca 42646674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 475
Target Start/End: Complemental strand, 8967893 - 8967836
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttt--tctatctaggttta 475  Q
    ||||||||||||| | |||||||  |||||||||||||||||  ||||||||||||||    
T  8967893 aaccctattttcataggtttgtcatttgcaaacttgttcttttctctatctaggttta 8967836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 10928289 - 10928377
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||| |||||||||||||||||| ||| ||||||| | ||||||  ||||||||||||  |||||| | ||||||||||| ||||||||||    
T  10928289 aaccttattttcacaagtttgtcacttacaaacttatatctttttaatctaggtttagcacttgct-agcctacgcttcc-tactgcgtca 10928377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 476
Target Start/End: Original strand, 8221488 - 8221545
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttag 476  Q
    ||||||||||||| |||||||||| |||||||||||| ||| ||| |||| |||||||    
T  8221488 aaccctattttcataagtttgtcgtttgcaaacttgtctctattcaatcttggtttag 8221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22641839 - 22641871
Alignment:
Q  2 ataactctttatccatgatctgtgagatgtgat 34  Q
    ||||||||||||||||||||| |||||||||||    
T  22641839 ataactctttatccatgatctatgagatgtgat 22641871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 509
Target Start/End: Original strand, 26981516 - 26981598
Alignment:
Q  425 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||| |||||||| |||||||||||||||||  |||| |||||| |||||  || | ||| |||||||||||| |||||||||    
T  26981516 tatttttacaagtttttcgcttgcaaacttgtttctttcaatctagatttagccctagataa-cctacgcttccg-actgcgtca 26981598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 499
Target Start/End: Complemental strand, 28661157 - 28661078
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    ||||||||||| ||| |||| ||||||||||||||| ||||| || || |||||||||  |||||| | ||||||||||||    
T  28661157 aaccctatttttacaggtttttcgcttgcaaacttgtttcttatcaatttaggtttagcacttgct-agcctacgcttccg 28661078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 471
Target Start/End: Complemental strand, 33152808 - 33152756
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctagg 471  Q
    ||||||||| ||  |||||||||||||||||||||| |||||||| |||||||    
T  33152808 aaccctattgtcgtaagtttgtcgcttgcaaacttgtttcttttcaatctagg 33152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 232; Significance: 1e-128; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 18527 - 18288
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18527 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 18428  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  18427 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttcaattaaatggactaactattctagggactttat 18328  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18327 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 18288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 18252 - 18196
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 29328023 - 29327784
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29328023 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 29327924  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29327923 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttat 29327824  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29327823 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 29327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11536030 - 11536269
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11536030 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 11536129  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11536130 acggatactttgagaataggttccttatgtttaatggggtctcacaattaagttgtacttaatgttccattaaacggactaactattctagggactttat 11536229  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11536230 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 11536269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11542948 - 11543187
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11542948 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 11543047  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543048 acggatactttgagaataggttccttatgtttaatggggtctgacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 11543147  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  11543148 tattttgaaacaaaacaaaatcaataaagaaatgcattgt 11543187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 15152682 - 15152445
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152682 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 15152583  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15152582 acggatactttaagaatagtttccgtatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttat 15152483  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  15152482 tattttgaaacaaaacaaactcaataaagaaatgcctt 15152445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18561246 - 18561009
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  18561246 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatcccacctctcaataaagcttgact 18561147  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18561146 acagatactttaagaatagtttcctaatgtttaacggggtctcacagttaagttatacttaatgttccattaaacagactaactattctagggactttat 18561047  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18561046 tattttgaaacaaaacaaaatcaataaagaaatgcctt 18561009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 12751065 - 12750828
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12751065 gataactctttatccatgatctgtgagatgtgatcatcagtctatccacataatagtctctatgctttaatgatatccaacttctcaataaagcttgact 12750966  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12750965 acggatactttaagaatagtttctttatgtttaacgaggtctcacaattaagttatacttaatgtttcattaaacggactaactattctagggactttat 12750866  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    || |||||||||||||||||||||||||||||||||||    
T  12750865 tactttgaaacaaaacaaaatcaataaagaaatgcctt 12750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 15148363 - 15148144
Alignment:
Q  19 atctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaata 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  15148363 atctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaata 15148264  T
Q  119 gtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaa 218  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  15148263 gtttccttatgtttaacggggtctcacaattaagttatacttaatgttcaatcaaacggactaactattctaggaactttattattttgaaacaaaacaa 15148164  T
Q  219 aatcaataaagaaatgcctt 238  Q
    | ||||||||||||||||||    
T  15148163 actcaataaagaaatgcctt 15148144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 12738775 - 12738542
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12738775 gataactctttatccatgatctgtgagatgtgatcttcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 12738676  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||    
T  12738675 acagatactttaagaatagtttccttatgtttaacaaggtctcacaattaagttataattaatgtttcattaaacaaactaactattctagggactttat 12738576  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||| ||||||||||||||||||    
T  12738575 tattttgaaacaaaataaaatcaataaagaaatg 12738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 333 - 509
Target Start/End: Complemental strand, 13882862 - 13882686
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13882862 actttttgattcaataaaattatttgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 13882763  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13882762 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 13882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 18257810 - 18258047
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||| ||| || ||||| ||||  ||| ||| |||||||    
T  18257810 gataactctttatccatgatctgtgagatgtgatcatcaatctatccacataatagtctttatgcattattgttatcctacttaacaaaaaaacttgact 18257909  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| |||||| | ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  18257910 acggatactttaagaataatgtccttgtgtttaatggggtctcacaattaagtcatacttaatgttccattaaacagactaattattctagggactttat 18258009  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18258010 tattttgaaacaaaacaaaatcaataaagaaatgcctt 18258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 362 - 509
Target Start/End: Complemental strand, 859303 - 859156
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 461  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  859303 ttttctctcaattctggtggattccggaaacctttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 859204  T
Q  462 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  859203 tctatctaggtttagcgcttgctaatcctacgcttccgtattgcgtca 859156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 362 - 509
Target Start/End: Complemental strand, 1217307 - 1217160
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 461  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1217307 ttttctctcaattctggtggattccggaaacctttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 1217208  T
Q  462 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  1217207 tctatctaggtttagcgcttgctaatcctacgcttccgtattgcgtca 1217160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 407 - 530
Target Start/End: Complemental strand, 13886261 - 13886138
Alignment:
Q  407 gtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcg 506  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13886261 gtttgtcgcttgcaaacctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcg 13886162  T
Q  507 tcagttggtatcagagcaggtttc 530  Q
    ||||||||||| ||||||||||||    
T  13886161 tcagttggtattagagcaggtttc 13886138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 13886364 - 13886245
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  13886364 actttttgattcaataaaatcattcgagattttctctcaattatggtggattctggaaacccttattttgataggtttgtcgcttgcaaacctattttca 13886265  T
Q  433 caagtttgtcgcttgcaaac 452  Q
    ||||||||||||||||||||    
T  13886264 caagtttgtcgcttgcaaac 13886245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 523
Target Start/End: Complemental strand, 1220562 - 1220426
Alignment:
Q  387 ggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaa 486  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| | |||||||    
T  1220562 ggaaacctctattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgtttgcaaacttgttcatttctatgtaggtttagcgtttgctaa 1220463  T
Q  487 ccctacgcttccgtactgcgtcagttggtatcagagc 523  Q
    ||||||||||| ||||| ||| |||||||||||||||    
T  1220462 ccctacgcttctgtactacgttagttggtatcagagc 1220426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 13392389 - 13392157
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||| |||||| ||||||||||||||||  |||||| | | ||||||||||||| ||||||| ||||||  ||| ||| |||| ||||||    
T  13392389 gataactctttatctatgatccgtgagatgtgatcatcgatctaccaatacaatagtctctatgttttaatgttatcccttttcacaataaagtttgact 13392290  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |  |||||||| |||||| | |||||   ||||||||| |||||| ||||||| | |||||||| |||||||| | |||||| | ||||||| |||||||    
T  13392289 attgatactttaagaataatgtcctttcatttaatggg-tctcacgattaagtcacacttaatgctccattaagcagactaattgttctaggaactttat 13392191  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||||||| |||| |||||||||    
T  13392190 tattttgaaacaaaacaaagtcaacaaagaaatg 13392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 2365112 - 2364917
Alignment:
Q  22 tgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtt 121  Q
    ||||||||||||||||||||| ||| |||| |||||||||||| ||||||| |||| || ||| ||| || | ||||||||| ||| ||| |||||| |     
T  2365112 tgtgagatgtgatcatcagtcgacccacatgatagtctctatgttttaatgttatctcatttcacaataagg-ttgactacgaatattttaagaataatg 2365014  T
Q  122 tccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaa 218  Q
    || ||  |||||||||| |||||| ||||||  | |||||||||||||||| |  |||||| |||||||| |||||||||||||||||||| |||||    
T  2365013 tcatttagtttaatgggttctcacgattaagccacacttaatgttccattagaaagactaattattctagagactttattattttgaaacataacaa 2364917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 333 - 423
Target Start/End: Original strand, 4303363 - 4303453
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg-tcgcttgcaacc 423  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  4303363 actttttgattcaataaaattattcgagattttctctcaattctagtggattccgaaaaccctta-tttaataggtttgttcgcttgcaacc 4303453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 420 - 527
Target Start/End: Original strand, 1874538 - 1874645
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||| ||||||| | |||||||||||||| ||||||||||||||    
T  1874538 aaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatcaaggtttagtgtttgctaa-catacgcttccgtactacgtcagttggtatc 1874636  T
Q  519 agagcaggt 527  Q
     ||||||||    
T  1874637 ggagcaggt 1874645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 7396431 - 7396221
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacct---acataatagtctctatgctttaatgatatcccacttctcaacaaagcttg 97  Q
    ||||| ||||||| |||||| ||||||||||||||||||||  |||    ||||||||||||||||||||||||   |||  | ||| ||  || |||||    
T  7396431 gataattctttattcatgatatgtgagatgtgatcatcagttcaccctgcacataatagtctctatgctttaatatcatcgtatttcacactaaggcttg 7396332  T
Q  98 actacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggact 196  Q
    |||||  ||  ||| |||||| ||| |||||||||||| ||||||||  ||||||| ||||||||||||||| ||||| | |||||||||||||| |||     
T  7396331 actacatatgttttaagaataattttcttatgtttaatagggtctcaagattaagtcatacttaatgttccatttaaatgaactaactattctagcgaca 7396232  T
Q  197 ttattattttg 207  Q
    || ||||||||    
T  7396231 tttttattttg 7396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 31577360 - 31577269
Alignment:
Q  332 aactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  31577360 aactttttcattcaataaaaatattcaagacttttctctcaattctggtggatttcggaaaccctta-tttgataggtttgtcgcttgcaacc 31577269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 234
Target Start/End: Complemental strand, 39112049 - 39111819
Alignment:
Q  3 taactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactac 102  Q
    ||||||||||||||||| || || ||| | | ||| ||||||||   ||||||||||||||  ||||||| |||  |  ||| ||| |||||| ||||      
T  39112049 taactctttatccatgacctatgtgatattaccattagtctacccttataatagtctctatattttaatgttatttcgtttcacaataaagctggactgt 39111950  T
Q  103 ggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 202  Q
    | ||| |||   |||||| ||||||||||||| |  ||||    |||||||  ||||||||||| |||||||||||||  |||||||||||||||||||     
T  39111949 gaatatttttgaaatagtgtccttatgtttaaagatgtcttgtgattaagtcgtacttaatgtttcattaaacggactcgctattctagggactttatt- 39111851  T
Q  203 ttttgaaacaaaacaaaatcaataaagaaatg 234  Q
    |||||||| |||||||||| ||||||||||||    
T  39111850 ttttgaaataaaacaaaattaataaagaaatg 39111819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 1365672 - 1365780
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 519  Q
    |||||||||||||||||||  |||||| ||||||||||| |||| |||||||||||| ||||||| | ||||  ||||||||||  ||||||||||||||    
T  1365672 aaccctattttcacaagttcatcgcttacaaacttgttcctttcaatctaggtttagcgcttgct-agcctatccttccgtact-agtcagttggtatca 1365769  T
Q  520 gagcaggtttc 530  Q
    |||||||||||    
T  1365770 gagcaggtttc 1365780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 4888770 - 4888686
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || || |||| | |||||||||||||| |||||||    
T  4888770 ctattttcacaggtttgtcgcttgcaaacttgttcttttctatctaggttcagcgcatgct-agcctacgcttccgtattgcgtca 4888686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 11543223 - 11543280
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11543223 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 11543280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 2653275 - 2653331
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2653275 catgatacaaagccaatcccaatcaatatagattggctattagggcttattccaaca 2653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 12738499 - 12738443
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12738499 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 12738443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 27309704 - 27309636
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaac 487  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  27309704 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttagcgcttgctaac 27309636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 11536305 - 11536362
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  11536305 catgatacaaagccaaaaccaatcaatatagagtggctattagggcttattccaacaa 11536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 12750789 - 12750732
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12750789 catgatacaaagccaaacccaatcaatatagattagctattagggcttactccaacaa 12750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 15152406 - 15152349
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  15152406 catgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaacaa 15152349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 1786683 - 1786763
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    |||||||||||| || ||||||||||||||||||||||  ||||||||||||||||||  |||||||| ||||||||||||    
T  1786683 aaccctattttcgcatgtttgtcgcttgcaaacttgttatttttctatctaggtttagcacttgctaatcctacgcttccg 1786763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 420 - 523
Target Start/End: Original strand, 1883489 - 1883592
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| | | ||||||| |||||| ||| ||||||| ||    
T  1883489 aaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatctaggtttagtgtttgct-agcatacgcttacgtactacgttagttggtgtc 1883587  T
Q  519 agagc 523  Q
    |||||    
T  1883588 agagc 1883592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 29327745 - 29327689
Alignment:
Q  277 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  29327745 atgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaacaa 29327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 29175780 - 29175838
Alignment:
Q  443 gcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgta 501  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  29175780 gcttgcaaactttttcttttcaatctaggtttagcgcttgctaaccctacgcttccgta 29175838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 420 - 476
Target Start/End: Original strand, 24840143 - 24840200
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttag 476  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  24840143 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttag 24840200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 15148105 - 15148049
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  15148105 catgatacaaaaccaaacccaattaatatagattggctattagggcttactccaaca 15148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 475
Target Start/End: Original strand, 27142666 - 27142722
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 475  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  27142666 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggttta 27142722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 5934607 - 5934670
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||    
T  5934607 cctattttcacaagtttgtcgcttgcaaatttgtttcttttcaatctaggtttagcgcttgcta 5934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 482
Target Start/End: Complemental strand, 3778797 - 3778735
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttg 482  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||  |||||||||||    
T  3778797 aaccctattttcacaagtttctcgcttgcaaacttgttcatttcaatctatatttagtgcttg 3778735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 468 - 530
Target Start/End: Original strand, 4300525 - 4300587
Alignment:
Q  468 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||| ||||||| | |||  ||||||||||||||||||||||||||||||||||||||    
T  4300525 taggtttagcgcttgcttaacctttgcttccgtactgcgtcagttggtatcagagcaggtttc 4300587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 7803120 - 7803031
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||| |||||||| |||||||| ||||||||||||| |||||||| | |||||||||   |||||||| ||||||||||||||||||||||    
T  7803120 aaccttattttcataagtttgttgcttgcaaacttgtttcttttcgacctaggtttaacccttgctaa-cctacgcttccgtactgcgtca 7803031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 11000915 - 11000849
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||| ||||||||    
T  11000915 aaccctattttcactagtttgtcgcttgcgaacttgtttcttttcaatctaggtttagcgcttgcta 11000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 30217819 - 30217879
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||    
T  30217819 ctattttcacaagtttgtcgcttgcgaacttgttc-tttcaatctaggtttagcgcttgcta 30217879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 13392085 - 13392029
Alignment:
Q  277 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  13392085 atgatacaaagtcaaacacaatcaatatagattggatattagggcttactccaacaa 13392029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 22572530 - 22572475
Alignment:
Q  367 tctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  22572530 tctcaattcttgtggattccggaaaccctta-tttgatagatttgtcgcttgcaacc 22572475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 3132791 - 3132748
Alignment:
Q  123 ccttatgtttaatggggtctcacaattaagttatacttaatgtt 166  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  3132791 ccttatgtttaatggggtctcacaattaagttacacttaatgtt 3132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 423
Target Start/End: Complemental strand, 5678388 - 5678299
Alignment:
Q  333 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| | |  |  |||||||| |||||||||||||||||||| ||||    
T  5678388 actttttcattcaataaaattattcgagacttttctctcaattctggtgta-tatgtgaaccctta-tttgataggtttgtcgcttgtaacc 5678299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 423
Target Start/End: Complemental strand, 5703440 - 5703351
Alignment:
Q  333 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| | |  |  |||||||| |||||||||||||||||||| ||||    
T  5703440 actttttcattcaataaaattattcgagacttttctctcaattctggtgta-tatgtgaaccctta-tttgataggtttgtcgcttgtaacc 5703351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 1369805 - 1369871
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||  ||||||||    
T  1369805 aaccctattttaacaagtttatcgcttgcaaacttgtttcttttcaatctaggtttaacgcttgcta 1369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 11228721 - 11228787
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||| |||||||||||||||| |||||||| ||||||| |||| |||||||||| ||||||    
T  11228721 aaccctatttccacaagtttgtcgcttccaaacttgtttcttttttatcaaggtttagtgtttgcta 11228787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 476
Target Start/End: Complemental strand, 1753683 - 1753630
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttag 476  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  1753683 ctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttaggtttag 1753630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 10234244 - 10234179
Alignment:
Q  125 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 190  Q
    |||||||||||||  |||||  ||||||||||| |||||| | |||||||||||||||||||||||    
T  10234244 ttatgtttaatggaatctcatgattaagttatatttaatggttcattaaacggactaactattcta 10234179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10235401 - 10235361
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagt 41  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  10235401 gataactctttatcaatgatctgtgagatgtgatcatcagt 10235361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 18258087 - 18258143
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||||||| |||||||    
T  18258087 catgatacaaggccaaaaccaatcaatctagattggctatcagggcttactccaaca 18258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 481
Target Start/End: Complemental strand, 8063885 - 8063831
Alignment:
Q  427 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgctt 481  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||| | ||||||||    
T  8063885 ttttcacaaatttatcgcttgcaaacttgttcttttcaatctagatctagtgctt 8063831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 530
Target Start/End: Complemental strand, 22572459 - 22572398
Alignment:
Q  468 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||| ||||||||| |||  |||||||| ||||||||||||| |||||||||||||||    
T  22572459 taggtttagcgcttgctaatcctt-gcttccgttctgcgtcagttggcatcagagcaggtttc 22572398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 4300470 - 4300511
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaatt 374  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  4300470 actttttgattcaatcaaattatttgagattttctctcaatt 4300511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 333 - 417
Target Start/End: Complemental strand, 4668342 - 4668258
Alignment:
Q  333 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgctt 417  Q
    ||||||| ||| || |||| ||||||||| |||||||| ||||| ||||||||  ||||||||||| ||| |||||||||||||||    
T  4668342 actttttcattgaaaaaaaatattcgagacttttctcttaattcaggtggattatggaaaccctta-tttaataggtttgtcgctt 4668258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 476
Target Start/End: Original strand, 11228981 - 11229038
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttag 476  Q
    |||||| |||||||| ||||||||| ||||||||||||| ||||| ||||||||||||    
T  11228981 aacccttttttcacacgtttgtcgcctgcaaacttgttctttttcaatctaggtttag 11229038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 2653207 - 2653239
Alignment:
Q  208 aaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||    
T  2653207 aaacaaaacaaaatcaataaagaaatgccttgt 2653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 18560969 - 18560913
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||| ||||||||| |||||||| || | |||||||| |||||||    
T  18560969 catgatacaaagccaagcccaatcaacatagattgcctttaagggcttactccaaca 18560913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 47833927 - 47833983
Alignment:
Q  3 taactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtct 59  Q
    ||||||||||| ||||||| ||||||| |||||| ||| |||||||| |||||||||    
T  47833927 taactctttattcatgatcggtgagatctgatcaccagcctacctacgtaatagtct 47833983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 482
Target Start/End: Complemental strand, 6451839 - 6451776
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttg 482  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||| |||||| ||||| |||||    
T  6451839 aaccttattttcacaggtttgtcgcttgcaaacttgtttcctttcaatctagatttagcgcttg 6451776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 530
Target Start/End: Complemental strand, 8916462 - 8916357
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagag 522  Q
    |||||| ||||||||| ||| |||||||||||||| ||||  |||||||||||  |||| || | | |||||||| | |||||||||||||||| |||||    
T  8916462 ctatttccacaagtttatcgtttgcaaacttgttcattttaaatctaggtttaacgcttact-agcatacgcttctg-actgcgtcagttggtaacagag 8916365  T
Q  523 caggtttc 530  Q
     |||||||    
T  8916364 taggtttc 8916357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 421
Target Start/End: Original strand, 32052989 - 32053041
Alignment:
Q  367 tctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    |||||||||||||||||| ||||||||||  |||||| || ||||||||||||||    
T  32052989 tctcaattctggtggatttcggaaaccct--ttttgacagatttgtcgcttgcaa 32053041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 32936926 - 32936869
Alignment:
Q  341 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 400  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||    
T  32936926 attcaataaaattat-cgagaattt-tctcaattatggtggattccgaaaacccttattt 32936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 35814871 - 35814936
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    |||| |||||| |||||||||||||||||||| ||| |  |||| |||||| ||||||| ||||||    
T  35814871 aaccttatttttacaagtttgtcgcttgcaaagttggttctttcaatctagatttagtgtttgcta 35814936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 27381220 - 27381459
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381220 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 27381319  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381320 atggatactttgagaatagtttccatatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 27381419  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27381420 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 27381459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 27471603 - 27471842
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471603 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 27471702  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471703 atggatactttgagaatagtttccatatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 27471802  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27471803 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 27471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 17684437 - 17684674
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17684437 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgact 17684536  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684537 acggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 17684636  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17684637 tattttgaaacaaaacaaaatcaataaagaaatgcctt 17684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16566288 - 16566525
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16566288 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 16566387  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566388 acggatactttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 16566487  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16566488 tattttgaaacaaaacaaaatcaataaagaaatgcctt 16566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 29309129 - 29308890
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29309129 gataactctttatccatgatatgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 29309030  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29309029 acggatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttat 29308930  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29308929 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 29308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 29316089 - 29315850
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29316089 gataactctttatccatgatatgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 29315990  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29315989 acggatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttat 29315890  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29315889 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 29315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 17691408 - 17691647
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  17691408 gataactctttatccatgatatgtgagatgtgatcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcactaaagcttgact 17691507  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691508 acggatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 17691607  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  17691608 tattttgaaagaaaacaaaatcaataaagaaatgccttgt 17691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 188945 - 189182
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  188945 gataactctttatccatgatatgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgact 189044  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  189045 acaaatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttat 189144  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  189145 tattttgaaacaaaacaaaatcaataaagaaatgcctt 189182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 11651962 - 11651725
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  11651962 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgact 11651863  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11651862 actgatacttttagaatagtttccttatttttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttat 11651763  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11651762 tattttgaaacaaatcaaaatcaataaagaaatgcctt 11651725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 25537148 - 25537364
Alignment:
Q  22 tgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtt 121  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  25537148 tgtgagatgtgatcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacgaatactttaagaatagtt 25537247  T
Q  122 tccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 221  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25537248 tccttatgtttaacggggtctcacaataaagttatacttaatgttccattaaacggactaattattctagggactttattattttgaaacaaaacaaaat 25537347  T
Q  222 caataaagaaatgcctt 238  Q
    |||||||||||||||||    
T  25537348 caataaagaaatgcctt 25537364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 353 - 530
Target Start/End: Original strand, 3535967 - 3536144
Alignment:
Q  353 tattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3535967 tattcgagattttctctcaatttctggtggattccggaa-cccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 3536065  T
Q  452 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3536066 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttgacatcagagcaggtttc 3536144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 353 - 512
Target Start/End: Original strand, 3542178 - 3542337
Alignment:
Q  353 tattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3542178 tattcgagattttctctcaatttctggtggattccggaa-cccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttacaaa 3542276  T
Q  452 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagtt 512  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3542277 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagtt 3542337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 333 - 523
Target Start/End: Original strand, 30049829 - 30050019
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattct-ggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 431  Q
    ||||||| ||||| ||| | |||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  30049829 acttttttattcattaataatattcgagattttctctcaatttttggtggattccggaa-ccctaattttgataggtttgtcgcttgcaactctattttc 30049927  T
Q  432 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 523  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  30049928 acaagtttgtcgcttgcaaacttgttcttttctatataggtttagcgcttgctaacccttcgcttccgtactgcgtcagttggcatcagagc 30050019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 13359237 - 13359474
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||| |||||||||||| || |||||||||||||||||||| | | ||||||||||||| ||||||||| | ||||| ||| ||| |||| ||||||    
T  13359237 gataactttttatccatgatttgcgagatgtgatcatcagtctatccatataatagtctctacgctttaatgttgtcccatttcacaataaaggttgact 13359336  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| | |||| | |  ||||||||||||| || |||| |||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  13359337 acggatactttaaaaataatgtttttatgtttaatggagtttcacgattaagttatacttaatgctccattaagcgaactaactattctagggactttat 13359436  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  13359437 tattttgaaacaaaacaaaataaataaataaatgcctt 13359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 333 - 523
Target Start/End: Original strand, 30052116 - 30052306
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattct-ggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 431  Q
    ||||||| ||||| ||| | |||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  30052116 acttttttattcattaataatattcgagattttctctcaatttttggtggattccggaa-ccctaattttgataggtttgtcgcttgcaactctattttc 30052214  T
Q  432 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| || |||| ||||||||||||||| ||||||||    
T  30052215 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgctttctaacccttcgattccatactgcgtcagttggcatcagagc 30052306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 336 - 505
Target Start/End: Complemental strand, 29340980 - 29340810
Alignment:
Q  336 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcaca 434  Q
    |||| ||||| ||| | ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  29340980 tttttattcattaataatattcgagacttttctctcaattctagtggattccggaaacctttattttgataggtttgtcgcttgtaaccctattttcaca 29340881  T
Q  435 agtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgc 505  Q
    ||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  29340880 agtttgtcgcttgcaaacttgtttttttctatctaggtttagcgcctgctaaccctacgcttccgtactgc 29340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 20553561 - 20553755
Alignment:
Q  7 tctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggat 106  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| | ||| |||||||||||  |||| |||||| ||| |||  || |||||||||    
T  20553561 tctttatcgatgatatgtgagatgtgatcatcagtctaccaacataaaaatctttatgctttaattttatctcacttcacaataaaaattcactacggat 20553660  T
Q  107 actttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatt 201  Q
     |||| |||||| | | ||||| ||||||||| |||||| |||||||  |||||||| || |||||||||||||| |||| |||| |||||||||    
T  20553661 gctttaagaataatattcttatatttaatgggatctcacgattaagtcgtacttaatatttcattaaacggactagctatcctagagactttatt 20553755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 333 - 423
Target Start/End: Original strand, 11190412 - 11190500
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  11190412 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaa-cctta-tttgataggtttgtcgcttgcaacc 11190500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 27925992 - 27925772
Alignment:
Q  2 ataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgacta 101  Q
    |||| ||||||||||||||| |||||||| |||||||||| || | |||||||||||| | ||||| |||| ||| |||||||  || |||| |||||||    
T  27925992 ataaatctttatccatgatccgtgagatgagatcatcagtttatccacataatagtctttgtgcttcaatgctataccacttccaaataaagtttgacta 27925893  T
Q  102 cggatactttgagaatagtttccttatgtttaatggggtctcacaattaagt--tatactta---atgttccattaaacggactaactattctagggact 196  Q
      |||||||| |||||| ||| |||  ||||||||| ||||||| |||||||   | |||||   ||||||| ||||||  ||||  ||||||| |||||    
T  27925892 gagatactttaagaataattttctttagtttaatggagtctcacgattaagtcacacacttaattatgttccgttaaacatactagttattctaaggact 27925793  T
Q  197 ttattattttgaaacaaaaca 217  Q
    |||||||||||||||||||||    
T  27925792 ttattattttgaaacaaaaca 27925772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 17850463 - 17850663
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||| || || ||||||| | |||| |||||||||||||||| | |||||||||| ||| ||| |||| |||   ||||| ||| |||||||||||    
T  17850463 gataactcgttgtcaatgatctataagatatgatcatcagtctacccatataatagtctatatacttgaatgttatttgacttcacaa-aaagcttgact 17850561  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    | ||||| ||| |||||||| ||||| | |||||| || | ||||||||||||  ||| ||||||||||  ||||  |||| ||||| ||||||||||||    
T  17850562 atggataatttaagaatagtgtccttgtttttaattggatatcacaattaagtcttacataatgttccaacaaacaaactagctattatagggactttat 17850661  T
Q  201 ta 202  Q
    ||    
T  17850662 ta 17850663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 17691683 - 17691737
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691683 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 17691737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 27381495 - 27381552
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381495 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 27381552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 27471878 - 27471935
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471878 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 27471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 29308854 - 29308797
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29308854 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 29308797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 29315814 - 29315757
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29315814 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 29315757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 11658936 - 11659000
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaacc 488  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  11658936 ctattttcacaagtttatcgcttgcaaatttgttcttttcaatctaggtttagtgcttgctaacc 11659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 425 - 524
Target Start/End: Complemental strand, 8049049 - 8048951
Alignment:
Q  425 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagca 524  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||||| ||| |||||||| | |||||||||| ||| || |||||||||||||||||||    
T  8049049 tattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgcttgct-agcctacgcttctgtattgggtcagttggtatcagagca 8048951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 341 - 423
Target Start/End: Original strand, 26571071 - 26571152
Alignment:
Q  341 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| |||||| || ||| |||| ||||||||||||||||    
T  26571071 attcaataaaattattcgagattttctctcaattctagcggattccgaaaaccccta-tttaatagatttgtcgcttgcaacc 26571152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 27822207 - 27822118
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| | ||||| | ||||||||||||||||||||||    
T  27822207 aaccctgttttcacaagtttgtcgcttgaaaacttgttccttttctatttaggtttagcgtttgct-agcctacgcttccgtactgcgtca 27822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 33615593 - 33615504
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| | | |||||| ||||||| |||||||    
T  33615593 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttctatctaggttttgcgcttg-ttagcctacgtttccgtaatgcgtca 33615504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 17684712 - 17684769
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17684712 catgatacaaagccaaacccattcaacatagattggctattagggcttattccaacaa 17684769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 457 - 509
Target Start/End: Original strand, 29342061 - 29342113
Alignment:
Q  457 tcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29342061 tcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 29342113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 221
Target Start/End: Complemental strand, 8510115 - 8509941
Alignment:
Q  48 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgggg-tctcaca 146  Q
    |||||||||||| |||| ||||||| |||| || |||  || ||||||| |||||  ||||||| | ||||   |||| || |||||||||| ||||| |    
T  8510115 acataatagtctttatgttttaatgctatctcatttcataataaagcttaactacatatactttaataatatcatcctcatatttaatgggggtctcata 8510016  T
Q  147 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 221  Q
    |||||||  ||| ||||||||||| |||  |||||| |||||||  |||||||||||||| |||||||| |||||    
T  8510015 attaagtcgtacataatgttccatcaaatagactaattattctatagactttattattttaaaacaaaataaaat 8509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 11651684 - 11651630
Alignment:
Q  278 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11651684 tgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 11651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 25537405 - 25537462
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  25537405 catgatacaaagccaaactcagtcaatatagattggctattagggcttaatccaacaa 25537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 3565652 - 3565739
Alignment:
Q  336 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||  |||||| |||| |||||||||||| |||||| |||||    
T  3565652 ttttcattcaataaaaatattcgagacttttctctcaattctggtggattttggaaactctta-tttgataggtttatcgcttacaacc 3565739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 427 - 530
Target Start/End: Complemental strand, 18718279 - 18718179
Alignment:
Q  427 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcagg 526  Q
    ||||||||||||||||  |||| || ||||  ||||| |||||||||||| |||||||| || ||| |||| |||||||||| |||||||||||||||||    
T  18718279 ttttcacaagtttgtc--ttgcgaatttgtctttttcaatctaggtttagcgcttgctagcc-tacacttctgtactgcgtccgttggtatcagagcagg 18718183  T
Q  527 tttc 530  Q
    ||||    
T  18718182 tttc 18718179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 20736594 - 20736773
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatac-tttgagaatagt-t 121  Q
    ||||||||| |||||||||||| |||||||||||||| | |||||| |  ||||||| |||| |  ||||||||||||| ||||| ||| |||||| | |    
T  20736594 tgagatgtggtcatcagtctacatacataatagtctcgacgctttattattatcccagttcttattaaagcttgactacagatacatttaagaataatgt 20736693  T
Q  122 tccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 202  Q
    || ||||| ||||||   |||||  ||||||| | ||||||| | |||||| ||| |||| |||||||||| |||||||||    
T  20736694 tctttatg-ttaatgtaatctcatgattaagtcaaacttaatataccattacacgaactatctattctaggaactttatta 20736773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 334 - 400
Target Start/End: Complemental strand, 2339223 - 2339157
Alignment:
Q  334 ctttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 400  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  2339223 ctttttcattcaataaaattat-cgagacttttctctcaattctggtggatttcggaaacccttattt 2339157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 31258065 - 31258120
Alignment:
Q  178 actaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 233  Q
    ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  31258065 actaattattttagagactttattattttgaaacaaaacaaaagcaataaagaaat 31258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 468 - 530
Target Start/End: Original strand, 11190516 - 11190577
Alignment:
Q  468 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||||| |||||||||||  ||||||||| ||| ||||||||||||||||||||||||    
T  11190516 taggtttagtgtttgctaaccctt-gcttccgtattgcttcagttggtatcagagcaggtttc 11190577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 14238436 - 14238502
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| || || |||||||| ||||||    
T  14238436 aaccttattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttatgtttagtgtttgcta 14238502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 13359512 - 13359569
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||| ||| ||||    
T  13359512 catgatacaaagtcaaacccaatgaatatagattggctattaggacttactcccacaa 13359569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 16566563 - 16566611
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggctta 324  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  16566563 catgatacaaagtcaaactcaatcaacatagattggctattagggctta 16566611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 499
Target Start/End: Original strand, 18727115 - 18727186
Alignment:
Q  427 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    |||||||||||||||||||||| |||||||  ||||| |||||||||||| | ||||| | ||||||||||||    
T  18727115 ttttcacaagtttgtcgcttgcgaacttgtgtttttcaatctaggtttagcgtttgct-agcctacgcttccg 18727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 1127258 - 1127320
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||| ||||||||||||||||||| |||||||  |||||||||||| ||| ||||    
T  1127258 ctattttcacaaatttgtcgcttgcaaacttgtttctttttaatctaggtttagcgctcgcta 1127320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 12882123 - 12882189
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||||||||||||||||||  |||||||| |||| || ||||||||| |||| ||||||    
T  12882123 aaccctattttcacaagtttgtcgctttaaaacttgtctcttctcaatctaggttcagtgtttgcta 12882189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 13645955 - 13645898
Alignment:
Q  363 tttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    ||||||||||||||| | ||||||||||||||||| ||| |||||||||| ||||||||    
T  13645955 tttctctcaattctgttagattccggaaaccctta-tttaataggtttgttgcttgcaa 13645898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 189221 - 189280
Alignment:
Q  276 catgatacaaagccaaacccaatcaata---tagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||||||||||   |||||||  |||||||||||| |||||||    
T  189221 catgatacaaagccaaacccaatcaatatactagattgattattagggcttactccaaca 189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 422
Target Start/End: Complemental strand, 2939837 - 2939780
Alignment:
Q  363 tttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    |||||||||||| ||||||||| || ||||| |||||| |||||||||||||||||||||    
T  2939837 tttctctcaattatggtggatttcgaaaacc-ttattt-gataggtttgtcgcttgcaac 2939780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 16394484 - 16394526
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattag 318  Q
    |||||||||||| ||||| |||||||||||||||| |||||||    
T  16394484 catgatacaaagtcaaactcaatcaatatagattgtctattag 16394526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 19232329 - 19232363
Alignment:
Q  367 tctcaattctggtggattccggaaacccttatttt 401  Q
    |||||||| ||||||||||||||||||||||||||    
T  19232329 tctcaattttggtggattccggaaacccttatttt 19232363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 22259925 - 22259990
Alignment:
Q  159 ttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 224  Q
    ||||||||  |||||| ||||||  |||| |||||| |||||||||||| |||| |||||||||||    
T  22259925 ttaatgttatattaaatggactagttattttagggagtttattattttgcaacataacaaaatcaa 22259990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 475
Target Start/End: Original strand, 22873822 - 22873870
Alignment:
Q  428 tttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggttta 475  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  22873822 tttcacaagtttgtcgcatgcaaacttgtctcttttcaatttaggttta 22873870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 33215246 - 33215186
Alignment:
Q  426 attttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    ||||||||| |||||||||||||||||||| |||||||  |||||| ||||| | ||||||    
T  33215246 attttcacaggtttgtcgcttgcaaacttgtttctttttaatctagatttagcgtttgcta 33215186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 228; Significance: 1e-125; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 6902 - 7141
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6902 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 7001  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7002 acggatactttgagaatagtttccttatgtttaatagggtctcacagttaagttatacttaatgttccattaaacggactaactattctagggactttat 7101  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7102 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 13918 - 14157
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  13918 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgact 14017  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14018 acagatactttgagaatagtttccttatgtttaatggggtctcacagttaagttatacttaatgttccattaaacggactaactattgtagggactttat 14117  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14118 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 7177 - 7234
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  7177 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaacaa 7234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 14193 - 14249
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14193 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 14249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 228; Significance: 1e-125; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21940904 - 21940665
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21940904 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 21940805  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21940804 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttat 21940705  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  21940704 tattttgaaacaaaacaaaatcaataaagaaatgcattgt 21940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 22171726 - 22171491
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  22171726 gataactctttatccatgatctatgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatattccacttctcaataaagcttgact 22171627  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22171626 acggatactttgagaatagtttc--tatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttat 22171529  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  22171528 tattttgaaataaaacaaaatcaataaggaaatgcctt 22171491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 6094362 - 6094129
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6094362 gataactctttatccatgatctgtgagatgtgatcatcactctacccatataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 6094263  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094262 acagatactttaaaaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 6094163  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||||||||||||||||||||||||||||||||||    
T  6094162 tattttgaaacaaaacaaaatcaataaagaaatg 6094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 24642888 - 24642655
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  24642888 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctctatactttaatgatatctcacttctcaataaagcttgact 24642789  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24642788 acgaatactttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaacaattctagggactttat 24642689  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
     |||||||||||||||||||||||||||||||||    
T  24642688 gattttgaaacaaaacaaaatcaataaagaaatg 24642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 333 - 530
Target Start/End: Complemental strand, 42891840 - 42891643
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42891840 actttttgattcaataaaattatttgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 42891741  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  42891740 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctagccctacgcttccgtattgcgtcagttggtatcaaagcaggtttc 42891643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 28555084 - 28554885
Alignment:
Q  39 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggg 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  28555084 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatacttttagaatagtttcattatgtttaatggg 28554985  T
Q  139 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  28554984 gtctcacaattaagttatacttaatgttccattaaacggactaactattttaggtattttattattttgaaactaaacaaaatcaataaagaaatgcctt 28554885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 335 - 530
Target Start/End: Complemental strand, 22512220 - 22512025
Alignment:
Q  335 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcaca 434  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22512220 ttttttattcaataaaattattcgagattttctctcaattctggtggatttcggaaacccttattttgataggtttgtcacttgcaaccctattttcaca 22512121  T
Q  435 agtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22512120 agtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgctaaccctacacttccgtactgcgtcagttggtatcagagcaggtttc 22512025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 336 - 509
Target Start/End: Complemental strand, 22922023 - 22921850
Alignment:
Q  336 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaa 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22922023 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaa 22921924  T
Q  436 gtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22921923 gtttgtcgcttgcaaacttattcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 22921850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 341 - 530
Target Start/End: Complemental strand, 22926816 - 22926627
Alignment:
Q  341 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttg 440  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22926816 attcaataaaaatattcgagattttctctcaattctggtggattccagaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttg 22926717  T
Q  441 tcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  22926716 tcgcttgcaaacttgttcttttctatctaggtttagcgctttctaaccctacgcttccgtactacgtcagttggcatcagagcaggtttc 22926627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 341 - 509
Target Start/End: Complemental strand, 22520967 - 22520799
Alignment:
Q  341 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttg 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22520967 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcacttgcaaccctattttcacaaatttg 22520868  T
Q  441 tcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| || |||||||    
T  22520867 tcgcttgcaaacttgatcttttctacctaggtttagcgcttgctaaccctacgcttccttattgcgtca 22520799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 333 - 510
Target Start/End: Original strand, 6845249 - 6845426
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattct-ggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 431  Q
    ||||||||||||| ||| | |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6845249 actttttgattcattaataatattcgagattttctctcaatttttggtggattccg-aaacccttattttgataggtttgtcgcttgcaaccctattttc 6845347  T
Q  432 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6845348 acaagtttatcgcttgtaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcag 6845426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 333 - 530
Target Start/End: Original strand, 42890311 - 42890500
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    |||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42890311 actttttgattcaataaaattattcgagattttctct------tggtggattccggaaacccttattttgataggtttgtcgcttgcagccctattttca 42890404  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |  | ||||||||||||||||||||||||||||    
T  42890405 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgct-agcctacgctt-ctaattgcgtcagttggtatcagagcaggtttc 42890500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 333 - 530
Target Start/End: Original strand, 37189780 - 37189976
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 431  Q
    ||||||| ||||| ||| | ||||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  37189780 acttttttattcattaataatattcgagatttt-tctcaatttctggtggatttcggaa-cccttattttgataggtttgtcgcttgcaaccctattttc 37189877  T
Q  432 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  37189878 acaagtttgtcgcttgcaaacttattcttttctatctagttttagagcttgctaaccctaagcttccgtactgcgtcaattggtatcagagcagatttc 37189976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 386 - 530
Target Start/End: Complemental strand, 22519469 - 22519325
Alignment:
Q  386 cggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22519469 cggaaacccttattttgataggtttgtcacttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgcta 22519370  T
Q  486 accctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  22519369 accctacacttccgtactgcgtcagttggtatcagagcaggtttc 22519325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 353 - 501
Target Start/End: Original strand, 23570516 - 23570665
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23570516 tattcgagacttttctctcaattctggtgcattctggaaacccttattttgataggtttgtcgcttgcaaccttattttcacaagtttgtcgcttgcaaa 23570615  T
Q  452 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgta 501  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23570616 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgta 23570665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 24636987 - 24636860
Alignment:
Q  107 actttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 206  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24636987 actttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaaaggactaactattctagggactttattatttt 24636888  T
Q  207 gaaacaaaacaaaatcaataaagaaatg 234  Q
    |||||||||||||||||| |||||||||    
T  24636887 gaaacaaaacaaaatcaagaaagaaatg 24636860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 23573515 - 23573639
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    ||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23573515 tattcgagacttttctctcaatttaggtggatttcggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgtaaa 23573614  T
Q  452 cttgttcttttctatctaggtttag 476  Q
    |||||| |||||||||||| |||||    
T  23573615 cttgttattttctatctagctttag 23573639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 18180859 - 18180770
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18180859 actttttgattcaataaaattattcgagattttctctcaattctggtggattctggaaacccttattttgataggtttgtcgcttgcaac 18180770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 2189810 - 2189701
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 519  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  2189810 aaccttattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgct-agcctacgcttccgtactgcgtcagttggtatca 2189712  T
Q  520 gagcaggtttc 530  Q
    ||||| |||||    
T  2189711 gagcatgtttc 2189701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 228
Target Start/End: Original strand, 38232349 - 38232570
Alignment:
Q  5 actctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacgg 104  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||| |||||| | ||||||||||   |||| |||||  ||| |||| ||||||||      
T  38232349 actctttatccatgatccgtgagatgtgattatcagtctacccacaaaatagtttttatgctttaagactatctcactttacaataaagtttgactacaa 38232448  T
Q  105 atactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatt 204  Q
    ||||||| |||||| | |  ||| ||||||||| || |||  |||||||||||| |||   |  ||||||| ||||||||||||||| || |||||||||    
T  38232449 atactttaagaatactat-tttacgtttaatggagtgtcatgattaagttatacctaaaaatttattaaacagactaactattctagaga-tttattatt 38232546  T
Q  205 ttgaaacaaaacaaaatcaataaa 228  Q
    |||||| |||||||||||||||||    
T  38232547 ttgaaataaaacaaaatcaataaa 38232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 18468649 - 18468737
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||  ||||| |||||||||||    
T  18468649 aaccctattttcacaagtttgtcgcttgcaagcttgttcttttctacctaggtttagcgcttgctaaccct-tgcttctgtactgcgtca 18468737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 2687742 - 2687851
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| |  || |||||||| ||||| |||| |||||||    
T  2687742 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttctatctaggtttagcgctcgct-agtcttcgcttccg-actgcatcaggtggtatc 2687839  T
Q  519 agagcaggtttc 530  Q
    ||||||||||||    
T  2687840 agagcaggtttc 2687851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 26374900 - 26375009
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 519  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||  ||||||| | | ||||||| | |||||| |||||||||||||    
T  26374900 aaccctatttttacaagtttgtcgcttgcgaacttgttcttttcaatctaggcttaacgcttgct-agcttacgctttcctactgcatcagttggtatca 26374998  T
Q  520 gagcaggtttc 530  Q
    |||||||||||    
T  26374999 gagcaggtttc 26375009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 21940629 - 21940573
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21940629 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 21940573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 22070164 - 22070108
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22070164 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaaca 22070108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 424 - 509
Target Start/End: Original strand, 24731231 - 24731316
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||||||| | |||||||| |||||||||||||    
T  24731231 ctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaggtttagcgcttgct-agcctacgctcccgtactgcgtca 24731316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 32872809 - 32873019
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||| |||||||| |||||||||||||||  |||| | |||| | |  |||||||||||||||||||| ||| ||||||||||| ||| ||| ||| |||    
T  32872809 gatacctctttattcatgatctgtgagataagatcgtgagtccagccgcataatagtctctatgctttgatgttatcccacttcacaataaatcttaact 32872908  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccat-taaacggactaactattctagggacttta 199  Q
    ||  ||| ||| | | || | ||  | | || |||| | |||||||||||||| ||||||||||||| || |||| |||  ||||||| || ||||||||    
T  32872909 acaaatattttaatagtattgtcactcttttcaatgagatctcacaattaagtcatacttaatgttctatataaatggatgaactattataaggacttta 32873008  T
Q  200 ttattttgaaa 210  Q
    |||||||||||    
T  32873009 ttattttgaaa 32873019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 22171452 - 22171395
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  22171452 catgatacaaaatcaaacccaatcaatatagattggctattagggcttattccaacaa 22171395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 24642608 - 24642555
Alignment:
Q  280 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24642608 atacaaagccaaacccaatcaatatagattggctattagggcttactccaacaa 24642555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 6094087 - 6094031
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6094087 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 6094031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 28554847 - 28554790
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  28554847 catgatacaaagccaaacccaatcaacaaagattggctattagggcttactccaacaa 28554790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 14983888 - 14984030
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||| |||| ||||||||| ||||||| ||||||| |||||||| ||||||||||| |||| | |||||| ||||||||||| ||| |||  |||| |    
T  14983888 gataacactttttccatgatccgtgagatatgatcattagtctacccacataatagtccctattc-ttaatgttatcccacttcacaataaattttgatt 14983986  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctca 144  Q
    |  |||||||| |||||| | ||||   ||||||| ||||||||    
T  14983987 atagatactttaagaataatgtcctatagtttaattgggtctca 14984030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 16598249 - 16598359
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttct-atctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||| ||||| |||||| ||||||||||| |  ||||||||  | ||| |||||||||     
T  16598249 aaccctattttcacaagtttgtcgcgtgcaaacttgtttctttctaatctaagtttagcgcttgctaaccat-tgcttccgttttacgttagttggtatt 16598347  T
Q  519 agagcaggtttc 530  Q
    |||| |||||||    
T  16598348 agagtaggtttc 16598359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 333 - 399
Target Start/End: Original strand, 26150602 - 26150669
Alignment:
Q  333 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttatt 399  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  26150602 actttttcattcaataaaaatattcgagacttttctctcaattctggtggattctggaaatccttatt 26150669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 468 - 530
Target Start/End: Complemental strand, 18180753 - 18180692
Alignment:
Q  468 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  18180753 taggtttagcgcttgctagcc-tacgcttccgtactgcgtcagttggtatcaaagcaggtttc 18180692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 24731035 - 24731122
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||||  ||||| ||||||| | |||||| ||| ||||||||||||    
T  24731035 cctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaaatttagcgcttgct-agcctacggttctgtactgcgtcag 24731122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 2375085 - 2375027
Alignment:
Q  161 aatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaa 219  Q
    ||||||||||||||  |||||| |||| |||||| ||||||||||||||||||||||||    
T  2375085 aatgttccattaaattgactaattattatagggagtttattattttgaaacaaaacaaa 2375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 15081494 - 15081572
Alignment:
Q  342 ttcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    |||||||||||||| |||||  || |||||||||| |||||||| ||||||| |||||| || ||||||||||||||||||    
T  15081494 ttcaataaaattat-cgagaacttttctcaattcttgtggattctggaaacctttattt-gacaggtttgtcgcttgcaac 15081572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 38082260 - 38082173
Alignment:
Q  335 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||| ||||||||||| |  ||||||  || ||||||||||| | |||||| |||||||||| ||||||| |||||||||||||||||    
T  38082260 tttttcattcaataaaaattatcgagaacttttctcaattctgatagattcctgaaaccctta-tttgatatgtttgtcgcttgcaacc 38082173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 10920297 - 10920234
Alignment:
Q  139 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 202  Q
    ||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||| | |||||||    
T  10920297 gtctcacgattaactcatacttaatgttccattaaacagactaattattctaggaattttatta 10920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 4360983 - 4360891
Alignment:
Q  332 aactttttgattcaataaaattattcgaga--ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||||||| ||||||||||| |||||||||  |||| ||||||||  | |||||||  |||||| ||| ||| |||||||||||||||||||||    
T  4360983 aactttttcattcaataaaaatattcgagactttttttctcaatttcgatggattctagaaaccttta-tttaataggtttgtcgcttgcaacc 4360891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 457
Target Start/End: Complemental strand, 2609584 - 2609547
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgtt 457  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2609584 aaccctattttcacaagtttgtcacttgcaaacttgtt 2609547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 9295256 - 9295335
Alignment:
Q  341 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    ||||||||||||||| |||||  || |||||||||||||||||||| ||||| | || ||||| || |||||||||||||||    
T  9295256 attcaataaaattat-cgagaacttttctcaattctggtggattccagaaactcata-tttgacagatttgtcgcttgcaac 9295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 14130165 - 14130244
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    |||| ||||||||||| ||| |||||||||||||||| ||||||| |||||| ||||  |||||| || ||||||||||||    
T  14130165 aaccttattttcacaaatttatcgcttgcaaacttgtctcttttcgatctagatttaacgcttgc-aagcctacgcttccg 14130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 475
Target Start/End: Original strand, 20693799 - 20693855
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 475  Q
    |||| ||||||||||| ||||||||||||||||||| || ||||| |||||||||||    
T  20693799 aaccatattttcacaaatttgtcgcttgcaaacttgtttattttcaatctaggttta 20693855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 486
Target Start/End: Complemental strand, 24578866 - 24578799
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaa 486  Q
    |||||||||||||||  |||  |||||||||||||| |||||||| |||||||||||| |||| ||||    
T  24578866 aaccctattttcacagatttaccgcttgcaaacttgtttcttttcgatctaggtttagcgctttctaa 24578799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 26378031 - 26378089
Alignment:
Q  450 aacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||| |||||| ||||| ||||||| | |||||||||||||||| |||||    
T  26378031 aacttgttcttttcaatctagatttagcgcttgct-agcctacgcttccgtactacgtca 26378089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 2375000 - 2374946
Alignment:
Q  279 gatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||| |||||||||| | |||   |||||||||||||||||||||    
T  2375000 gatacaaagccaaatccaatcaatacatatttattattagggcttattccaacaa 2374946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 457
Target Start/End: Original strand, 2689146 - 2689183
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgtt 457  Q
    |||||||||||||||  |||||||||||||||||||||    
T  2689146 aaccctattttcacagttttgtcgcttgcaaacttgtt 2689183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 8371519 - 8371564
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    ||||||| | |||||||||||| |||||||||||||| ||||||||    
T  8371519 tgagatgcggtcatcagtctacatacataatagtctcgatgcttta 8371564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 18835386 - 18835341
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    ||||||||| | |||||||||| |||||||||||||| ||||||||    
T  18835386 tgagatgtggtaatcagtctacatacataatagtctcgatgcttta 18835341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 24636642 - 24636605
Alignment:
Q  295 caatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  24636642 caatcaatatagattggctattatggcttactccaaca 24636605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 228; Significance: 1e-125; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 21330216 - 21330455
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21330216 gataactctttatccatgatctgtgagatgtgatcatcagtccacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 21330315  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330316 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 21330415  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  21330416 tattttgaaacaaaacaaaatcaataaagaaatgtcttgt 21330455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 333 - 530
Target Start/End: Complemental strand, 27956330 - 27956133
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27956330 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttcataggtttgtcgcttgcaaccctattttca 27956231  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
     | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27956230 taggtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 27956133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 18796745 - 18796506
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||    
T  18796745 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctcaatgctttaatgatataccacttcacaataaagcttgact 18796646  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||| ||| |||||| | |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18796645 acagataatttaagaataatatccttatgttaaaagaggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttgt 18796546  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||| || ||| |||| ||||||    
T  18796545 tattttgaaacaaaacaaaataaacaaataaattccttgt 18796506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 333 - 509
Target Start/End: Complemental strand, 27952494 - 27952318
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  27952494 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttcaaaggtttgtcgcttgcaaccctattttca 27952395  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27952394 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 27952318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 341 - 530
Target Start/End: Original strand, 2155887 - 2156077
Alignment:
Q  341 attcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagttt 439  Q
    ||||||||| | ||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2155887 attcaataataatattcaagacttttctctcaattctgatggattccgaaaacccttattttgataggtttgtcgcttgcaatcctattttcacaagttt 2155986  T
Q  440 gtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttc 530  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2155987 gtcgctcgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttggcatcagagcaggtttc 2156077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 331 - 530
Target Start/End: Original strand, 31634015 - 31634214
Alignment:
Q  331 caactttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattt 429  Q
    ||||||||| ||||| ||| | |||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  31634015 caacttttttattcattaataatatttgagattttctctcaatttctggtggattccg-aaacccttattttgataggtttgtcgcttgcaatcctattt 31634113  T
Q  430 tcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggttt 529  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31634114 tcacaagtttgtcgctagcaaacttgttcttttctatctaggtttagcgtttgctaaccctacgcttccgtactgcgtcagttggtatcatagcaggttt 31634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 353 - 510
Target Start/End: Original strand, 22011368 - 22011526
Alignment:
Q  353 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 451  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  22011368 tattcgagacttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttccaaccctattttcacaagtttgtcacttgcaaa 22011467  T
Q  452 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22011468 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcag 22011526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 333 - 510
Target Start/End: Original strand, 33655540 - 33655717
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 431  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33655540 actttttcattcaataaaattattcgagattttctctcaatttctggtggattccggaaacccttattttgataggtttgtcgtttgcaaccctattttc 33655639  T
Q  432 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  33655640 acaagtttgtcgcttgcaaacttgtatttttctatctaggtttagcgcttgctaa-cctacacttccgtactgcgtcag 33655717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 330 - 510
Target Start/End: Original strand, 31636247 - 31636427
Alignment:
Q  330 acaactttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatt 428  Q
    |||||||||| ||||| ||| | ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  31636247 acaacttttttattcattaataatattcaagattttctctcaatttctggtggattccggaa-cccttattttgataggtttgtcgcttgcaaccatatt 31636345  T
Q  429 ttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 510  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31636346 ttcacaagtttgtcgcttgcaaactagttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcag 31636427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18620043 - 18619807
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||| |||||| |||||||||||||||| | ||||| |||||||||||| |||||||||||  ||||||  ||| ||| |||| |||||     
T  18620043 gataactctttatctatgatccgtgagatgtgatcatcggcctacccacataatagtctatatgctttaatattatcccttttcacaataaagtttgacc 18619944  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||| |||||| | ||||| ||||||||||| ||||| |||||||| | |||||||| |||||||||| |||||| |||| ||||||||||||    
T  18619943 acagatactttaagaataatatccttttgtttaatggg-tctcataattaagtcacacttaatgctccattaaacagactaattattatagggactttat 18619845  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  18619844 tattttgaaacaaaacaaaatcaacaaagaaattcctt 18619807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 36647293 - 36647402
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 519  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  36647293 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgct-agcctacgcttccgtactgcgtcagttggtatca 36647391  T
Q  520 gagcaggtttc 530  Q
    ||||| |||||    
T  36647392 gagcatgtttc 36647402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 19692598 - 19692737
Alignment:
Q  95 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 194  Q
    ||||||| ||||||||| |||||| |||||||  |||||||| | |||||  ||||||| |  |||||||||||||||||| |||||| |||||||||||    
T  19692598 ttgactaaggatactttaagaataatttcctttagtttaatgagatctcatgattaagtcaggcttaatgttccattaaacagactaattattctaggga 19692697  T
Q  195 ctttattattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  19692698 cttcattattttgaaacaaaacaaaatcaataaagaaatg 19692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 20978084 - 20977957
Alignment:
Q  48 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 147  Q
    |||||||||||||||||||||| ||||||| |||||| ||  |||||||||||||||||  ||| |||||| ||||||||| ||||||||| |||||  |    
T  20978084 acataatagtctctatgctttagtgatatctcacttcacattaaagcttgactacggatgttttaagaataatttccttatttttaatgggatctcatga 20977985  T
Q  148 ttaagttatacttaatgttccattaaac 175  Q
    |||| |||| ||||||||||||||||||    
T  20977984 ttaaattattcttaatgttccattaaac 20977957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 33051618 - 33051728
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||| ||||||| | |||| ||||||||||| ||||||||||||||    
T  33051618 aaccctattttcaaaagtttgtcgcttgcaaacttgttctttttcaatttaggtttagcgcttgct-agcctaagcttccgtactacgtcagttggtatc 33051716  T
Q  519 agagcaggtttc 530  Q
    ||||||||||||    
T  33051717 agagcaggtttc 33051728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 36270405 - 36270199
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||| || ||||   |||||||||||||||||||||||| ||| |||||||| ||| |||||||| |||||| |||| ||  ||||||||| |    
T  36270405 gataactctttctctatgactcgtgagatgtgatcatcagtctacccacacaatagtctttatactttaatgttatccctcttcacactaaagcttgatt 36270306  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggacttta 199  Q
    ||||||  ||| |||||||| || || |||||||||  ||||||| ||||||| | ||||||  || || ||||    ||||||||||||||||||||||    
T  36270305 acggatgttttaagaatagtgtcattgtgtttaatgatgtctcacgattaagtcacacttaacatttcatttaagtaaactaactattctagggacttta 36270206  T
Q  200 ttatttt 206  Q
    |||||||    
T  36270205 ttatttt 36270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 15129390 - 15129478
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||||| |||||    
T  15129390 aaccctattttcacaagtttgtcgcttgcgaacttgttcttttctatctaggtttagcgcttgct-agcctacgcttccgtactacgtca 15129478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 18822322 - 18822115
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||| ||||| |||||| |||| |||||||||||||||||   |||||||| ||| | ||||||||||||||||||||||  |  ||||||||| |    
T  18822322 gataactccttatcaatgatccgtgatatgtgatcatcagtctattgacataataatctatctgctttaatgatatcccacttcaaactaaagcttgatt 18822223  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaa-tgttcca-ttaaacggactaactattctagggacttt 198  Q
    ||  ||  ||| |||||||| ||||| |||||||||| ||||||| ||||||  | |||||| | ||||| ||||||| |||||| ||||||  ||||||    
T  18822222 acatatgttttaagaatagtgtccttgtgtttaatggtgtctcacgattaagccacacttaatttttccatttaaacgaactaacaattctatagacttt 18822123  T
Q  199 attatttt 206  Q
    ||||||||    
T  18822122 attatttt 18822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 8781429 - 8781515
Alignment:
Q  335 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  8781429 tttttcattcaataaaattattcgagatttactctcaattctggtggatttc-gaaaccctta-tttgataggtttgtcgcttgcaacc 8781515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 530
Target Start/End: Original strand, 28737911 - 28738014
Alignment:
Q  425 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagca 524  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||||||||  |||||| |  ||||||||||| ||||||||||||||||||||||||    
T  28737911 tattttcaaaagtttgtcgcttgcaaacttgctcttttcaatctaggtttagcacttgct-agactacgcttccg-actgcgtcagttggtatcagagca 28738008  T
Q  525 ggtttc 530  Q
    | ||||    
T  28738009 gatttc 28738014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 21330493 - 21330549
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330493 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 21330549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 423
Target Start/End: Original strand, 22264348 - 22264437
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||| ||| || |||||||||||| |||||||||    
T  22264348 actttttgattcaataaaattattcgagattttatctcaattctgatggattctagaaaccttta-ttcgataggtttgtctcttgcaacc 22264437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 425 - 509
Target Start/End: Original strand, 2165899 - 2165983
Alignment:
Q  425 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||||  ||||||||||||    
T  2165899 tattttgataagtttgttgcttgcaaacttgttcttttctatctaggtttaacgcttgttaaccctacgctgtcgtactgcgtca 2165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18852027 - 18852146
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||| ||||||| |||||||| |||||| |||||||| |||||||||||| ||   ||||||| ||||| ||||| ||| |||| | ||||    
T  18852027 gataactctttattcatgatccgtgagatgggatcattagtctaccgacataatagtctatacaatttaatgttatcctacttcacaataaagttggact 18852126  T
Q  101 acggatactttgagaatagt 120  Q
    ||  ||||||| ||||||||    
T  18852127 acatatactttaagaatagt 18852146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 23457646 - 23457712
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||    
T  23457646 aaccctattttcacaagtttgtcgcttgcaaacttgtttattttcaatctaggtttagcgcttgcta 23457712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 423
Target Start/End: Complemental strand, 44675368 - 44675308
Alignment:
Q  362 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  44675368 ttttctctcaattctggtggattccgaaaaccctta-tttgataggtatgtcgcttgcaacc 44675308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 420 - 498
Target Start/End: Complemental strand, 5171674 - 5171596
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttcc 498  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||| |||||||||||    
T  5171674 aaccctatttttacaagtttgtcgcttgcaaacttgtctcttttcaatctagatttagcgcttgttaa-cctacgcttcc 5171596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 498
Target Start/End: Original strand, 21772375 - 21772452
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttcc 498  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||| | | ||||| |||||||||||    
T  21772375 aaccctattttcataagtttgtcgcttgcaaacttgtttttttcaatctaagtttagcgttggctaa-cctacgcttcc 21772452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22183451 - 22183528
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcc 78  Q
    |||||||| ||||| | |||||||||||| ||||||||| |||||| || ||||||||||||| |||||||| |||||    
T  22183451 gataactccttatcaaagatctgtgagatttgatcatcaatctacccacgtaatagtctctatactttaatgttatcc 22183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 484
Target Start/End: Complemental strand, 32162058 - 32161993
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgct 484  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||  |||||||    
T  32162058 aaccctattttcacaagtttgtcacttgcaaacttgtttcttttcgatctaggtttaacgcttgct 32161993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 475
Target Start/End: Original strand, 12966477 - 12966532
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggttta 475  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||    
T  12966477 aaccctattttcacaagttcgtcgcttgcgaacttgttcttttcaatctagattta 12966532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19279527 - 19279445
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccactt 83  Q
    ||||||| ||||||||||||  ||||||||||||||| |||| ||   ||||||||||| |||||||||| | ||||||||||    
T  19279527 gataactttttatccatgatacgtgagatgtgatcattagtcaactcgcataatagtctttatgctttaaagttatcccactt 19279445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 1518193 - 1518281
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||| ||||| ||||||||| ||||||| | |||| ||||||||| || ||||||||    ||||||||||||||||||||    
T  1518193 aaccctattttcataagttcgtcgcttgcgaacttgtccctttcaatctaggttaagcgcttgctagga-tacgcttccgtactgcgtca 1518281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 18725770 - 18725683
Alignment:
Q  333 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 420  Q
    ||||||| |||||||||||||||| || | |||||||| |||| | ||||| ||| |||||| |||||| |||||||||||||||||||    
T  18725770 actttttcattcaataaaattatttgaaacttttctcttaattttagtggaatccagaaacctttattt-gataggtttgtcgcttgca 18725683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 421
Target Start/End: Original strand, 2165838 - 2165924
Alignment:
Q  336 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    |||| ||||| ||| | ||||||||| ||||||||||||| |||||||||| | ||||  ||||||||||| |||||| ||||||||    
T  2165838 tttttattcattaataatattcgagacttttctctcaattttggtggattctgaaaacatttattttgataagtttgttgcttgcaa 2165924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 5841221 - 5841305
Alignment:
Q  336 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    |||| ||||||||||||||| |||||  || |||||||||| |||||||||| |||||| | ||| || ||||||||||||||||||    
T  5841221 ttttcattcaataaaattat-cgagaacttttctcaattcttgtggattccgaaaacccctgttt-gacaggtttgtcgcttgcaac 5841305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 8294582 - 8294644
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttctt-ttctatctaggtttagtgcttgcta 485  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||  |||||||    
T  8294582 ctatttttacaagtttgtcgcttgcaaacgtgttcttcttctatctaagtttagcacttgcta 8294644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 12098609 - 12098654
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||    
T  12098609 tgagatctgatcatcagtctacatacataatagtctctatgtttta 12098654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 19692773 - 19692830
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||| |||||| ||||||||    
T  19692773 catgatacaaaaccaaacctaataaatacagattggctattaaggcttactccaacaa 19692830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 524
Target Start/End: Complemental strand, 32163860 - 32163757
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaactt-gttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||| |||||||||||  |||| || | ||| |||||| | |||||||||||||||||     
T  32163860 aaccatattttcacaagtttgacgcttacaaacttatttcttttcaatctaggtttaacgctttct-agccttcgcttctg-actgcgtcagttggtatt 32163763  T
Q  519 agagca 524  Q
    ||||||    
T  32163762 agagca 32163757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 23456580 - 23456631
Alignment:
Q  425 tattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 475  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||||||||    
T  23456580 tattttcaaaagtttgtcgcttgcaaacttgtttcttttcaatataggttta 23456631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 454
Target Start/End: Original strand, 4184929 - 4184963
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaactt 454  Q
    ||||||||||||||||||||||||||||| |||||    
T  4184929 aaccctattttcacaagtttgtcgcttgcgaactt 4184963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 28737841 - 28737903
Alignment:
Q  424 ctattttcacaagttt-gtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||||||| ||| |||||||||||  ||||||| || ||||||||| ||||||||    
T  28737841 ctattttcacaagttttgtctcttgcaaacttactcttttcaatttaggtttagcgcttgcta 28737903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 28741292 - 28741326
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtc 58  Q
    |||||||||||||||||||||| ||||||||||||    
T  28741292 tgagatgtgatcatcagtctacatacataatagtc 28741326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36801950 - 36802003
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataat 54  Q
    |||||||| ||||| ||||| |||||| |||||||||||||||||  |||||||    
T  36801950 gataactcattatcaatgatttgtgaggtgtgatcatcagtctactcacataat 36802003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 18796470 - 18796411
Alignment:
Q  276 catgatacaaagccaaacccaatcaa--tatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||| |||||||  ||||||||  || |||||||||| ||||||||    
T  18796470 catgatacaaagccaaacgcaatcaatatatagattttctgttagggcttaatccaacaa 18796411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 19616471 - 19616435
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctc 60  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  19616471 tgagatgtggtcatcagtctacatacataatagtctc 19616435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 29800500 - 29800468
Alignment:
Q  27 gatgtgatcatcagtctacctacataatagtct 59  Q
    ||||||||||||||||||| |||||||||||||    
T  29800500 gatgtgatcatcagtctacatacataatagtct 29800468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 204
Target Start/End: Original strand, 36802664 - 36802820
Alignment:
Q  49 cataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaat 148  Q
    ||||||| ||| |||||||||||| ||||||||||  ||   || ||||| |||||||  ||| |||||| | || || |||||||||   |||  ||||    
T  36802664 cataataatctatatgctttaatgttatcccactttacactgaatcttgattacggatgttttaagaataatgtcattgtgtttaatgatatcttgcaat 36802763  T
Q  149 taagttatacttaatgttcca-ttaaacggactaactattctagggactttattatt 204  Q
    ||||| | | ||||| ||||| ||||||| | ||||||||| | |||||||||||||    
T  36802764 taagtaacatttaatattccatttaaacgaattaactattcaaaggactttattatt 36802820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7346 - 7107
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7346 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 7247  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7246 acggatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttctattaaacggactaactattctagggactttat 7147  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  7146 tattttgaaacaaaacaaaatcaataaagaaataccttgt 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 7071 - 7014
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7071 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 24695434 - 24695673
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  24695434 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttattgatatctcacttctcaataaagcttgact 24695533  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695534 acggatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 24695633  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24695634 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 24695673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 19714466 - 19714703
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  19714466 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgact 19714565  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
     |||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714566 tcggatattttaagaatagattccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 19714665  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    || ||||||| |||||||||||||||||||||||||||    
T  19714666 tactttgaaataaaacaaaatcaataaagaaatgcctt 19714703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 18569841 - 18570070
Alignment:
Q  11 tatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactt 110  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  18569841 tatccatgatatgtgagatgtgatcatcagtctaccaacataatagtctttatgctttaatgatattccacttctcaataaagcttgactacggatactt 18569940  T
Q  111 tgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 210  Q
    | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18569941 taagagtagtttccttatgtttaacggggtctcacaattaagttatacttaatgttcaattaaacggactaactattctagggactttattattttgaaa 18570040  T
Q  211 caaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||| |||||    
T  18570041 caaaacaaaatcaataaagaaatgtcttgt 18570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 19707186 - 19707419
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  19707186 gataactctttatccatgatctgtgagatgtgatcatcagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgact 19707285  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
     |||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19707286 tcggatattttaagaatagattccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttat 19707385  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    || ||||||| |||||||||||||||||||||||    
T  19707386 tactttgaaataaaacaaaatcaataaagaaatg 19707419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 333 - 509
Target Start/End: Complemental strand, 40778962 - 40778786
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  40778962 actttttgattcaataaaattattcgagattttctctcaattctggtggattccagaaacccttattttgataggtttgtcgcttgcaaccctattttta 40778863  T
Q  433 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  40778862 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgttaaccctgcgcttccgtactgcgtca 40778786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 333 - 530
Target Start/End: Complemental strand, 21849147 - 21848944
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttatttt------gataggtttgtcgcttgcaacccta 426  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||      |||| ||||||||||||||||||||    
T  21849147 actttttgattcaataaaattattcgagattttctctcaattctagtggattccgaaaacacttatttttattttgataagtttgtcgcttgcaacccta 21849048  T
Q  427 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcagg 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21849047 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttggcgcttgctaaccctacgcttccgtactgcgtcggttggtatcagagcagg 21848948  T
Q  527 tttc 530  Q
    ||||    
T  21848947 tttc 21848944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 27347446 - 27347679
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||| ||||||||||||||||||||||| | ||| | ||| ||||||||||||||||||||| ||||||  ||| ||| |||||||||||    
T  27347446 gataactctttatctatgatctgtgagatgtgatcatcggcctatccacaaaatagtctctatgctttaatgttatcccttttcacaataaagcttgact 27347545  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||  ||||||| |||||| | |||||  ||||||| ||||||||| ||||||| | |||||||| |||||||||| || ||| ||||||| |||||||||    
T  27347546 acatatactttaagaataatgtcctttcgtttaat-gggtctcacgattaagtcacacttaatgctccattaaacagattaattattctaaggactttat 27347644  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgc 235  Q
    ||||||||| |||||||||||||| ||||||||||    
T  27347645 tattttgaatcaaaacaaaatcaacaaagaaatgc 27347679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 22546984 - 22547217
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||  ||||||| |||| |||||| ||| |||| ||||||    
T  22546984 gataactctttatccatgatttgtgagatgtgatcatcggtctatccacataatagtctctatattttaatgttatctcacttcacaataaagtttgact 22547083  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
     || ||||||| | |||| | ||| ||| ||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |  |||||    
T  22547084 gcgaatactttaaaaataatgtccatatatttaatgagatctcacgattaagttatacttaatgttccattaaaccgactaactattatagcggttttat 22547183  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatg 234  Q
    |||||| ||| |||||||||| |||||| |||||    
T  22547184 tattttaaaataaaacaaaatgaataaataaatg 22547217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 18807002 - 18807175
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||  ||||||||||||||||||||| || ||||  ||||| ||| || ||||||||    
T  18807002 gataactctttatccatgatatatgaaatgtgatcatcagtctacccgcataatagtctctatgctttattgttatcttacttcacaataacgcttgact 18807101  T
Q  101 acggatactttgagaatagtttcc-ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaa 174  Q
    |  |||||||| |||||| | ||| |||| |||||||| ||||||| ||||||| | ||||||||||||||||||    
T  18807102 atagatactttaagaataatgtccattat-tttaatggtgtctcacgattaagtcacacttaatgttccattaaa 18807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 39538827 - 39538701
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||  ||||||||||||||||||||||| ||| ||||||| |||    
T  39538827 gataactctttatccatgatctgtgaaatatgaccatcagtctacccacataatagtcttcatgctttaatgatatcccacttcacaataaagcttaact 39538728  T
Q  101 acggatactttgagaatagtttcctta 127  Q
    | ||||| ||| |||||||| ||||||    
T  39538727 atggatattttaagaatagtgtcctta 39538701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 39538071 - 39537962
Alignment:
Q  131 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 230  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |  |||||||||||||||||||||| ||||||    
T  39538071 ttaatgaggtctcacaattaagttatacttaatgttccattaaacgaaccaactattctaaggacttaaccattttgaaacaaaacaaaatcattaaaga 39537972  T
Q  231 aatgccttgt 240  Q
    |||| |||||    
T  39537971 aatggcttgt 39537962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 55 - 236
Target Start/End: Original strand, 17285754 - 17285935
Alignment:
Q  55 agtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 154  Q
    ||||| |||||||||||  ||||||| ||| ||| |||| | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17285754 agtctatatgctttaatactatcccaattcacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17285853  T
Q  155 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 236  Q
    | ||||||||||||||||||| |||||||||||||  |||  |||||||||||||||| ||||||||||||||| |||||||    
T  17285854 acacttaatgttccattaaacagactaactattctctggagattattattttgaaacataacaaaatcaataaataaatgcc 17285935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 24695709 - 24695766
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695709 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 24695766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 19497393 - 19497283
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctat-ctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 518  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | |||  ||||| ||||||||| |||   ||||||||| |||||||||| ||||    
T  19497393 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttttttctacatttagcgcttgctaatcctta-cttccgtaccgcgtcagttgatatc 19497295  T
Q  519 agagcaggtttc 530  Q
    ||||||||||||    
T  19497294 agagcaggtttc 19497283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 31886640 - 31886537
Alignment:
Q  131 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 230  Q
    ||||||| ||||||| |||||||  ||||| |||||| |||||| | ||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  31886640 ttaatggagtctcacgattaagtcgtacttgatgttcaattaaatgaactaattattctaaggactttattaatttgaaacaaaacaaaatcactaaaga 31886541  T
Q  231 aatg 234  Q
    ||||    
T  31886540 aatg 31886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 236
Target Start/End: Original strand, 17298907 - 17299088
Alignment:
Q  55 agtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 154  Q
    ||||| |||||||||||  ||||||||||  ||| |||| | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17298907 agtctatatgctttaatactatcccacttaacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17299006  T
Q  155 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 236  Q
      ||||||||||||||||| |||||||||||||||  |||  |||||||||  ||||| ||||||||||||||| |||||||    
T  17299007 gcacttaatgttccattaatcggactaactattctctggatattattatttataaacataacaaaatcaataaataaatgcc 17299088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 19714742 - 19714798
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19714742 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 19714798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 423
Target Start/End: Complemental strand, 19677298 - 19677217
Alignment:
Q  341 attcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 423  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  19677298 attcaataaaat-attcgagacttttctctcaattctggtggattccgaaaaccctta-tttgaaaggtttgtcgcttgcaacc 19677217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 19707462 - 19707520
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaac 334  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  19707462 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaacaac 19707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 27347722 - 27347778
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27347722 catgatacaaagccaaacgcaatcaatatagattggctattagggcttactccaaca 27347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 18252416 - 18252504
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttct-tttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||  ||||| ||| ||||| |||||| |||||||||    
T  18252416 aaccctattttcacaggtttgtcgcttgcaaacttgttctatttctatctaggtttaacgcttg-taagcctacacttccg-actgcgtca 18252504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 423 - 509
Target Start/End: Complemental strand, 8456465 - 8456380
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||| ||||||| ||||||||| |||||||| |||||| |||||||||||| ||||||| |||||||||||||| |||||||||    
T  8456465 cctatttttacaagttcgtcgcttgcgaacttgtttcttttcaatctaggtttagcgcttgct-accctacgcttccg-actgcgtca 8456380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 22440858 - 22440936
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccg 499  Q
    ||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||||  |||||| | ||||||||||||    
T  22440858 aaccctattatcataagtttgtcgcttgcgaacatgttcttttctatctaggtttagcacttgct-agcctacgcttccg 22440936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 18570108 - 18570168
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaactt 336  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||| || ||||||||    
T  18570108 catgatacaaagccaaacccaattaatatagattagctattagagcttactcgaacaactt 18570168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 492567 - 492633
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||  ||||| ||||||||    
T  492567 aaccctatcttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaaatttagcgcttgcta 492633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 214
Target Start/End: Original strand, 33477389 - 33477479
Alignment:
Q  124 cttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaa 214  Q
    |||||| |||||| |||||||| ||||  | | |||||||| |||||||| | | ||||||||| || |||||||||||||||||||||||    
T  33477389 cttatgattaatgaggtctcacgattagatcacacttaatgatccattaatcagcctaactattgtaaggactttattattttgaaacaaa 33477479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17285716 - 17285759
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtcta 44  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  17285716 gataactctttatccatgacctgtgatatgtgatcatcagtcta 17285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 39537925 - 39537870
Alignment:
Q  277 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||| |||| || |||| |||||||||||||||||||||| |||||||    
T  39537925 atgatacaaagctaaactcagtcaacatagattggctattagggcttaatccaaca 39537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 26140343 - 26140431
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttct-tttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||| ||||||||||||||||| |||||| | |||| |||||| ||||| | ||||||| |||| ||||||| |||||||||    
T  26140343 aaccctattttcataagtttgtcgcttgcaatcttgttttctttcaatctagatttagcgtttgctaa-cctatgcttccg-actgcgtca 26140431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 35160899 - 35160815
Alignment:
Q  336 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    |||| ||||||||||||||| |||||  || ||| |||||||||||| ||| |||||||||| ||||| |||||||||| |||||||    
T  35160899 ttttcattcaataaaattat-cgagaacttttcttaattctggtggaatcctgaaaccctta-tttgacaggtttgtcgtttgcaac 35160815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 509
Target Start/End: Complemental strand, 21844468 - 21844437
Alignment:
Q  478 gcttgctaaccctacgcttccgtactgcgtca 509  Q
    ||||||||||||||||||||||||||||||||    
T  21844468 gcttgctaaccctacgcttccgtactgcgtca 21844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 20100509 - 20100543
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtc 58  Q
    |||||||||||||||||||||| ||||||||||||    
T  20100509 tgagatgtgatcatcagtctacatacataatagtc 20100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 457
Target Start/End: Complemental strand, 9868494 - 9868457
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgtt 457  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  9868494 aaccctattttcacaagtttgttgcttgtaaacttgtt 9868457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 11479489 - 11479420
Alignment:
Q  122 tccttatgtttaatg-gggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 190  Q
    ||||||||||||||| |||||||||||| |||| | ||||||| || ||||||||  ||||| |||||||    
T  11479489 tccttatgtttaatgagggtctcacaatcaagtcacacttaatatttcattaaacacactaattattcta 11479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 12765260 - 12765305
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    ||||||||| |||||||||||| |||||||||||||| | ||||||    
T  12765260 tgagatgtggtcatcagtctacatacataatagtctcgacgcttta 12765305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 31267928 - 31267984
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatccca 80  Q
    ||||||||| ||||| |||||| |||||||||||||| | |||||| || |||||||    
T  31267928 tgagatgtggtcatccgtctacatacataatagtctccacgctttattgttatccca 31267984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 39535509 - 39535465
Alignment:
Q  15 catgatctgtgagatgtgatcatcagtctacctacataatagtct 59  Q
    ||||| || ||||||||| |||||||||||| |||||||||||||    
T  39535509 catgacctatgagatgtggtcatcagtctacatacataatagtct 39535465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 212; Significance: 1e-116; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 1232 - 993
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1232 gataactttttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgact 1133  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  1132 acagatactttgagaatagtttctttatgtttaatggggtctcacaattaagttatacttaatgtttcattaaacggactaactattttagggactttat 1033  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  1032 tattttgaaacaaaacaaaatcaataaagaaatgtcttgt 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 957 - 901
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  957 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 212; Significance: 1e-116; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 25958 - 26197
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  25958 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtcgctatgctttaatgatatcccacttttcaataaagcttgact 26057  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  26058 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatatttaatgttccattaaatggactaactattctaaggactttat 26157  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  26158 tattttgaaacaaaacaaaatcaataaagaaatgtcttgt 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 26231 - 26287
Alignment:
Q  277 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26231 atgatacaaagccaaacccaatcaatatagattgactattagggcttattccaacaa 26287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 5768 - 5531
Alignment:
Q  1 gataactctttatccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgact 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  5768 gataactctttatccatgacctgtgagatgtgatcatcagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgact 5669  T
Q  101 acggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 200  Q
    ||  ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5668 acatatactttaagaataatttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttat 5569  T
Q  201 tattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    |||||||||||||||  |||||||||||||||||||||    
T  5568 tattttgaaacaaaaataaatcaataaagaaatgcctt 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 5492 - 5435
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  5492 catgatacaaagccaaacccaaacaatatagattggctattagggcttacttcaacaa 5435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 7e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 230365 - 230545
Alignment:
Q  57 tctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttat 156  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||  ||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  230365 tctctatgctttaatgatatcccacttctcaataaatcttgactacaaatactttaagaatggtttccttatgtttaa-ggggtctcacaattaagttat 230463  T
Q  157 acttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 238  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  230464 acttaatgttccattaaacggactaactattataagaactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 230545  T

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Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 230584 - 230640
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  230584 catgatacaaagccaaacccaatcaatatagattggctattattgcttactccaaca 230640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 336 - 509
Target Start/End: Complemental strand, 45435 - 45262
Alignment:
Q  336 ttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcaca 434  Q
    |||| ||||| ||| | |||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| |    
T  45435 tttttattcattaataatattcgagattttctctcaatttctggtggattctggaa-cccttattttgataggtttgtcgcttgcaaccttattttcata 45337  T
Q  435 agtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 509  Q
    |||||||||||||||||||||||||||  ||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  45336 agtttgtcgcttgcaaacttgttctttcttatctaattttagcgcttgctaaccctacgcttccgtactgtgtca 45262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 436 - 529
Target Start/End: Complemental strand, 46806 - 46713
Alignment:
Q  436 gtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggttt 529  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  46806 gtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctcaccctacgcttccgtactgcgtcagttggcatcagagccggttt 46713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 421
Target Start/End: Complemental strand, 46880 - 46792
Alignment:
Q  333 actttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 421  Q
    ||||||| ||||| ||| | |||||||||||||||||||| || ||||||||||||| |||| | |||||||||||||||||||||||||    
T  46880 acttttttattcattaataatattcgagattttctctcaatttttggtggattccgg-aaccttaattttgataggtttgtcgcttgcaa 46792  T

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Target: scaffold0176 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 8446 - 8510
Alignment:
Q  176 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8446 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 8546 - 8603
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8546 catgatacaaagccgaacccaatcaatatagattggctattagggcttattccaacaa 8603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 23769 - 23826
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23769 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 23826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 424 - 530
Target Start/End: Original strand, 16051 - 16154
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 523  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||||  |||| | | |||||| ||||| |||||||||||||||||||||||    
T  16051 ctattttcagatgtttgtcacttgcaaacttgttcttttctatctaggtttagcacttg-ttagcctacg-ttccg-actgcgtcagttggtatcagagc 16147  T
Q  524 aggtttc 530  Q
    |||||||    
T  16148 aggtttc 16154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 423 - 530
Target Start/End: Original strand, 14850 - 14955
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagag 522  Q
    ||||||||||||||||| |||||||| ||||| ||  |||| ||| |||||||| ||||||| | ||||||||| |  | ||||||||||||||||||||    
T  14850 cctattttcacaagtttttcgcttgccaacttatttatttcaatcaaggtttagcgcttgct-agcctacgctt-ctaattgcgtcagttggtatcagag 14947  T
Q  523 caggtttc 530  Q
    ||||||||    
T  14948 caggtttc 14955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 1658 - 1723
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    |||| |||||| |||||||||||| |||||||||||||  |||| |||||||||||  ||||||||    
T  1658 aaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgcta 1723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 16579 - 16522
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579 catgatataaagccaaacccaatcaatatagattggctattagggcttattccaacaa 16522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 16648 - 16615
Alignment:
Q  207 gaaacaaaacaaaatcaataaagaaatgccttgt 240  Q
    ||| ||||||||||||||||||||||||||||||    
T  16648 gaancaaaacaaaatcaataaagaaatgccttgt 16615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 425 - 524
Target Start/End: Complemental strand, 11672 - 11574
Alignment:
Q  425 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagca 524  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||||| ||| |||||||| | |||||||||| ||| || |||||||||||||||||||    
T  11672 tattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgcttgct-agcctacgcttctgtattgggtcagttggtatcagagca 11574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 423 - 481
Target Start/End: Original strand, 37714 - 37772
Alignment:
Q  423 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgctt 481  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  37714 cctattttcataagtttgtcgcttgcaaacttgttcttttcaatctaggtttagcgctt 37772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 473
Target Start/End: Original strand, 49322 - 49375
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtt 473  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  49322 aaccctattttcataagtttgtcgcttgcaaacttgttcttctcaatctaggtt 49375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 41 - 98
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  41 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 98  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 9000 - 8944
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 332  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  9000 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 8944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 90083 - 90166
Alignment:
Q  1 gataactcttt-atccatgatctgtgagatgtgatcatcagtctacctacataatagtctctatgctttaatgatatcccactt 83  Q
    ||||||||||| | |||||||| |||||||||||| ||||||||| ||||||| |||||| |||||||||||  ||||||||||    
T  90083 gataactcttttacccatgatccgtgagatgtgattatcagtctatctacatagtagtctttatgctttaatattatcccactt 90166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 8331 - 8243
Alignment:
Q  333 actttttgattcaataaaattattcgagat-tttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 422  Q
    ||||||| ||||||| ||||| |||||||| ||| ||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||    
T  8331 actttttcattcaatcaaatt-ttcgagatctttttctcaattctgatggattccagaaaccctta-tttgacaggtttgtcgcttgcaac 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 9702 - 9769
Alignment:
Q  420 aaccctattttcacaagttt--gtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| |||||||||||  ||||||||    
T  9702 aaccctattttcacaagtgttagtcgcttggaaacttgttcttttcaatctaggtttaccgcttgcta 9769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 10202 - 10256
Alignment:
Q  276 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 330  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||    
T  10202 catgatacaaagtcaaactcaatcaatatagattggctattagagcttactccaa 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 221
Target Start/End: Original strand, 10127 - 10158
Alignment:
Q  190 agggactttattattttgaaacaaaacaaaat 221  Q
    ||||||||||||||||||||||||||||||||    
T  10127 agggactttattattttgaaacaaaacaaaat 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 1 - 37
Alignment:
Q  296 aatcaatatagattggctattagggcttattccaaca 332  Q
    |||||||||||||||||||||||||||||||||||||    
T  1 aatcaatatagattggctattagggcttattccaaca 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 145734 - 145800
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 485  Q
    ||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||||| | ||||||    
T  145734 aaccctatttttacaagcttgtcgcttgcaaacttgatttttttcaatctaggtttagcgattgcta 145800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 17640 - 17705
Alignment:
Q  420 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 485  Q
    |||| |||||| |||||||||||| |||||||||||||  |||| |||||||||||  ||||||||    
T  17640 aaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgcta 17705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 5930 - 5877
Alignment:
Q  280 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 333  Q
    |||||||| ||||| ||||||||||||||||||||||| | |||| ||||||||    
T  5930 atacaaagtcaaactcaatcaatatagattggctattatgacttactccaacaa 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 16402 - 16466
Alignment:
Q  424 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaacc 488  Q
    |||||||| |||||||||||||||||||||  || ||||  |||||||||||||| || ||||||    
T  16402 ctattttctcaagtttgtcgcttgcaaactcattttttttaatctaggtttagtgtttactaacc 16466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 15089 - 15134
Alignment:
Q  24 tgagatgtgatcatcagtctacctacataatagtctctatgcttta 69  Q
    ||||||| | |||||||||||| |||||||||||||| ||||||||    
T  15089 tgagatgcggtcatcagtctacatacataatagtctcgatgcttta 15134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 28744 - 28711
Alignment:
Q  367 tctcaattctggtggattccggaaacccttattt 400  Q
    ||||||||||||| ||||||||||||||||||||    
T  28744 tctcaattctggtagattccggaaacccttattt 28711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 92267 - 92194
Alignment:
Q  139 gtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttgaaac 211  Q
    ||||||| ||||||||||||||||||||||| |||||   ||||  |||||||| |||||||||| ||| ||||    
T  92267 gtctcacgattaagttatacttaatgttccatttaaaataactagatattctagagactttattactttaaaac 92194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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