View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5953_high_17 (Length: 278)

Name: NF5953_high_17
Description: NF5953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5953_high_17
NF5953_high_17
[»] chr1 (43 HSPs)
chr1 (13-278)||(3558890-3559155)
chr1 (194-278)||(29359682-29359766)
chr1 (194-278)||(37685374-37685458)
chr1 (194-278)||(37700060-37700144)
chr1 (194-278)||(37619587-37619673)
chr1 (192-278)||(8350138-8350224)
chr1 (194-267)||(49065306-49065381)
chr1 (194-278)||(649812-649898)
chr1 (194-278)||(27464999-27465085)
chr1 (219-278)||(30536035-30536094)
chr1 (194-278)||(31088224-31088310)
chr1 (227-278)||(36954701-36954752)
chr1 (219-278)||(9566927-9566988)
chr1 (236-278)||(20288325-20288367)
chr1 (219-269)||(30570578-30570628)
chr1 (236-278)||(40612157-40612199)
chr1 (219-278)||(50775123-50775184)
chr1 (219-278)||(1689435-1689494)
chr1 (236-275)||(6949966-6950005)
chr1 (194-278)||(9987995-9988081)
chr1 (198-278)||(18434838-18434920)
chr1 (194-278)||(23645454-23645540)
chr1 (194-278)||(33100851-33100937)
chr1 (235-278)||(46903513-46903556)
chr1 (194-278)||(51718568-51718654)
chr1 (236-278)||(2827696-2827738)
chr1 (236-278)||(11897217-11897259)
chr1 (219-278)||(12657265-12657326)
chr1 (219-278)||(14983816-14983877)
chr1 (232-278)||(15059683-15059729)
chr1 (236-278)||(15470042-15470084)
chr1 (219-278)||(18336190-18336250)
chr1 (236-278)||(21433386-21433428)
chr1 (219-278)||(34818011-34818072)
chr1 (236-278)||(35846305-35846347)
chr1 (219-278)||(47642573-47642634)
chr1 (219-278)||(48858867-48858928)
chr1 (233-278)||(1690478-1690523)
chr1 (236-277)||(27787533-27787574)
chr1 (238-278)||(12999810-12999850)
chr1 (194-275)||(15082992-15083075)
chr1 (246-278)||(47113317-47113349)
chr1 (217-278)||(48326011-48326074)
[»] chr3 (59 HSPs)
chr3 (193-269)||(32587738-32587814)
chr3 (194-275)||(20547932-20548015)
chr3 (194-278)||(35377023-35377109)
chr3 (219-278)||(47742328-47742387)
chr3 (194-278)||(5114121-5114207)
chr3 (194-278)||(5244272-5244358)
chr3 (194-275)||(27541444-27541527)
chr3 (194-278)||(44413864-44413948)
chr3 (193-278)||(55361174-55361261)
chr3 (219-275)||(6178392-6178450)
chr3 (194-278)||(16969508-16969594)
chr3 (194-278)||(41505534-41505620)
chr3 (194-278)||(50876304-50876390)
chr3 (153-271)||(52564549-52564668)
chr3 (219-278)||(34456834-34456895)
chr3 (219-278)||(42358605-42358666)
chr3 (215-278)||(48353040-48353105)
chr3 (236-278)||(48405454-48405496)
chr3 (222-278)||(17550183-17550240)
chr3 (238-278)||(46966088-46966128)
chr3 (194-278)||(19149033-19149119)
chr3 (194-278)||(32205638-32205724)
chr3 (194-278)||(36670956-36671042)
chr3 (194-278)||(38926671-38926757)
chr3 (194-278)||(44855996-44856082)
chr3 (194-278)||(47472372-47472458)
chr3 (236-275)||(50314671-50314710)
chr3 (219-278)||(288769-288830)
chr3 (219-269)||(1340148-1340198)
chr3 (236-278)||(7294085-7294127)
chr3 (236-278)||(9557908-9557950)
chr3 (219-278)||(14207224-14207285)
chr3 (219-278)||(14214972-14215033)
chr3 (236-278)||(16295507-16295549)
chr3 (236-278)||(26014855-26014897)
chr3 (236-278)||(26452708-26452750)
chr3 (248-278)||(27511768-27511798)
chr3 (219-278)||(28700504-28700565)
chr3 (236-278)||(30805589-30805631)
chr3 (236-278)||(35597205-35597247)
chr3 (236-274)||(39629824-39629862)
chr3 (233-275)||(47276272-47276314)
chr3 (219-278)||(52714777-52714838)
chr3 (236-278)||(55322702-55322744)
chr3 (196-278)||(9692769-9692853)
chr3 (153-206)||(34057853-34057906)
chr3 (235-276)||(34145524-34145565)
chr3 (156-256)||(35299777-35299878)
chr3 (194-271)||(42357026-42357103)
chr3 (194-278)||(11630692-11630776)
chr3 (193-269)||(13712812-13712888)
chr3 (235-275)||(14847503-14847543)
chr3 (238-278)||(25641558-25641598)
chr3 (230-278)||(26996360-26996407)
chr3 (194-242)||(41309198-41309246)
chr3 (219-275)||(43720428-43720484)
chr3 (238-278)||(44463400-44463440)
chr3 (194-275)||(45711381-45711464)
chr3 (194-271)||(52939701-52939780)
[»] chr2 (49 HSPs)
chr2 (198-278)||(8848643-8848723)
chr2 (194-278)||(9990734-9990820)
chr2 (215-275)||(6842522-6842582)
chr2 (194-278)||(9207633-9207719)
chr2 (194-278)||(22416256-22416342)
chr2 (213-278)||(36587431-36587496)
chr2 (198-275)||(19109039-19109118)
chr2 (194-278)||(9647175-9647261)
chr2 (194-278)||(18254151-18254237)
chr2 (194-278)||(27490672-27490758)
chr2 (236-275)||(33737319-33737358)
chr2 (194-278)||(34945032-34945118)
chr2 (215-278)||(7084677-7084742)
chr2 (236-278)||(12784384-12784426)
chr2 (219-278)||(12889799-12889859)
chr2 (153-278)||(23352807-23352932)
chr2 (160-275)||(33583130-33583247)
chr2 (194-278)||(6049287-6049372)
chr2 (204-278)||(9760061-9760137)
chr2 (213-278)||(21611621-21611686)
chr2 (153-278)||(39147809-39147937)
chr2 (198-275)||(18846657-18846736)
chr2 (215-278)||(45259251-45259312)
chr2 (235-278)||(4858156-4858199)
chr2 (219-278)||(6336296-6336355)
chr2 (194-278)||(6511294-6511380)
chr2 (228-271)||(10833623-10833666)
chr2 (236-275)||(13266012-13266051)
chr2 (194-278)||(29449255-29449341)
chr2 (235-278)||(34373048-34373091)
chr2 (194-278)||(43487422-43487508)
chr2 (219-278)||(2144763-2144824)
chr2 (236-278)||(10472133-10472175)
chr2 (198-265)||(19642654-19642723)
chr2 (236-278)||(20247853-20247895)
chr2 (153-207)||(33780295-33780349)
chr2 (236-278)||(40721814-40721856)
chr2 (236-278)||(43725248-43725290)
chr2 (233-278)||(7121422-7121466)
chr2 (153-275)||(34215311-34215434)
chr2 (194-242)||(3838822-3838870)
chr2 (234-278)||(7367913-7367957)
chr2 (236-276)||(9194286-9194326)
chr2 (246-278)||(11229317-11229349)
chr2 (246-278)||(13850180-13850212)
chr2 (219-275)||(21738584-21738640)
chr2 (246-278)||(24727458-24727490)
chr2 (217-278)||(36774582-36774645)
chr2 (234-278)||(40599262-40599305)
[»] chr7 (33 HSPs)
chr7 (219-278)||(22925251-22925310)
chr7 (194-274)||(4292475-4292557)
chr7 (194-278)||(41863571-41863655)
chr7 (219-278)||(1284459-1284518)
chr7 (153-261)||(39497201-39497312)
chr7 (219-278)||(38259107-38259166)
chr7 (194-278)||(44895514-44895600)
chr7 (203-278)||(41989693-41989770)
chr7 (196-278)||(47448870-47448954)
chr7 (194-278)||(3937065-3937149)
chr7 (246-278)||(7077749-7077781)
chr7 (194-271)||(38956560-38956639)
chr7 (222-265)||(30064497-30064540)
chr7 (235-278)||(37969974-37970017)
chr7 (219-275)||(40854621-40854679)
chr7 (194-278)||(41189485-41189571)
chr7 (235-278)||(41458885-41458928)
chr7 (232-275)||(47379622-47379665)
chr7 (236-278)||(155967-156009)
chr7 (236-278)||(28548207-28548249)
chr7 (236-278)||(30941429-30941471)
chr7 (219-278)||(43942680-43942741)
chr7 (236-278)||(44189296-44189338)
chr7 (215-265)||(44651193-44651243)
chr7 (215-278)||(47954064-47954129)
chr7 (219-275)||(34108825-34108879)
chr7 (196-278)||(34978340-34978424)
chr7 (219-276)||(41650753-41650810)
chr7 (228-278)||(42584846-42584898)
chr7 (246-278)||(640435-640467)
chr7 (194-278)||(32529798-32529882)
chr7 (246-278)||(40227162-40227194)
chr7 (246-278)||(45607067-45607099)
[»] chr4 (58 HSPs)
chr4 (194-278)||(10250457-10250543)
chr4 (215-278)||(38792854-38792917)
chr4 (219-274)||(40693591-40693646)
chr4 (219-274)||(24045292-24045347)
chr4 (194-278)||(27354296-27354382)
chr4 (232-278)||(6520813-6520859)
chr4 (219-278)||(39606010-39606071)
chr4 (192-278)||(1627498-1627586)
chr4 (194-278)||(26492052-26492136)
chr4 (194-275)||(31574881-31574964)
chr4 (194-275)||(36177952-36178035)
chr4 (194-278)||(44539779-44539863)
chr4 (194-278)||(26732268-26732354)
chr4 (215-275)||(38381039-38381101)
chr4 (194-278)||(51986085-51986171)
chr4 (236-278)||(5249912-5249954)
chr4 (195-278)||(23369275-23369360)
chr4 (236-278)||(42490952-42490994)
chr4 (236-278)||(51324568-51324610)
chr4 (190-267)||(52223237-52223314)
chr4 (194-267)||(53801701-53801774)
chr4 (194-271)||(11068738-11068817)
chr4 (238-278)||(29891888-29891928)
chr4 (194-271)||(37997304-37997383)
chr4 (182-278)||(149414-149512)
chr4 (194-278)||(5622501-5622587)
chr4 (219-278)||(29175270-29175329)
chr4 (194-278)||(43175027-43175113)
chr4 (194-278)||(46634143-46634229)
chr4 (228-275)||(56557780-56557827)
chr4 (236-278)||(1031798-1031840)
chr4 (236-278)||(2109475-2109517)
chr4 (228-278)||(2575766-2575816)
chr4 (219-278)||(5386416-5386477)
chr4 (219-274)||(19232100-19232157)
chr4 (236-278)||(34537973-34538015)
chr4 (228-278)||(37060361-37060411)
chr4 (236-278)||(44257715-44257757)
chr4 (236-278)||(49585038-49585080)
chr4 (219-278)||(50890040-50890101)
chr4 (153-206)||(2999230-2999283)
chr4 (233-278)||(6239423-6239468)
chr4 (196-249)||(32130183-32130236)
chr4 (153-238)||(35897786-35897871)
chr4 (228-278)||(41849734-41849786)
chr4 (196-278)||(54000742-54000826)
chr4 (238-278)||(5466483-5466523)
chr4 (194-275)||(7632403-7632486)
chr4 (246-278)||(12241101-12241133)
chr4 (194-278)||(26724914-26724997)
chr4 (246-278)||(33820332-33820364)
chr4 (246-278)||(37731958-37731990)
chr4 (246-278)||(40409162-40409194)
chr4 (246-278)||(46686276-46686308)
chr4 (194-278)||(49449105-49449189)
chr4 (246-278)||(49768865-49768897)
chr4 (234-274)||(50980638-50980678)
chr4 (213-278)||(51577658-51577725)
[»] scaffold0184 (1 HSPs)
scaffold0184 (193-278)||(16729-16815)
[»] scaffold0078 (1 HSPs)
scaffold0078 (193-278)||(56029-56115)
[»] chr8 (44 HSPs)
chr8 (194-278)||(42768249-42768333)
chr8 (194-278)||(10902748-10902834)
chr8 (194-274)||(27854710-27854790)
chr8 (194-271)||(31249466-31249545)
chr8 (222-278)||(26000581-26000639)
chr8 (194-278)||(27325801-27325887)
chr8 (219-278)||(33100437-33100496)
chr8 (194-278)||(43397824-43397910)
chr8 (194-275)||(22719486-22719569)
chr8 (213-278)||(26026940-26027007)
chr8 (217-278)||(34718159-34718221)
chr8 (194-278)||(5277441-5277527)
chr8 (219-278)||(6511828-6511887)
chr8 (194-274)||(10839424-10839506)
chr8 (194-278)||(11253484-11253570)
chr8 (219-278)||(13970963-13971021)
chr8 (236-275)||(21526266-21526305)
chr8 (228-275)||(33605055-33605102)
chr8 (194-278)||(37449367-37449453)
chr8 (236-278)||(5740771-5740813)
chr8 (236-278)||(6440125-6440167)
chr8 (236-278)||(7325758-7325800)
chr8 (239-277)||(7598753-7598791)
chr8 (236-278)||(11114655-11114697)
chr8 (236-278)||(12490758-12490800)
chr8 (236-278)||(24946045-24946087)
chr8 (236-278)||(25830231-25830273)
chr8 (219-278)||(29028928-29028988)
chr8 (236-278)||(32020451-32020493)
chr8 (232-278)||(32133371-32133417)
chr8 (222-256)||(34694847-34694881)
chr8 (219-278)||(35067204-35067265)
chr8 (232-274)||(35701809-35701851)
chr8 (236-278)||(43285948-43285990)
chr8 (236-278)||(43715918-43715960)
chr8 (153-206)||(4658154-4658207)
chr8 (238-275)||(10184114-10184151)
chr8 (213-278)||(2730921-2730988)
chr8 (234-278)||(5742641-5742685)
chr8 (238-278)||(24798345-24798385)
chr8 (194-275)||(32501138-32501221)
chr8 (246-278)||(32674228-32674260)
chr8 (246-278)||(38939185-38939217)
chr8 (193-269)||(43632279-43632355)
[»] chr5 (39 HSPs)
chr5 (153-273)||(6596381-6596501)
chr5 (194-278)||(5168226-5168312)
chr5 (215-278)||(35075540-35075603)
chr5 (193-278)||(20270614-20270699)
chr5 (222-274)||(11148559-11148611)
chr5 (194-275)||(18660805-18660888)
chr5 (194-278)||(33037563-33037649)
chr5 (198-278)||(7552913-7552993)
chr5 (194-278)||(19844252-19844336)
chr5 (218-278)||(26686925-26686985)
chr5 (218-278)||(26956656-26956716)
chr5 (222-278)||(33599006-33599064)
chr5 (194-278)||(35646426-35646512)
chr5 (156-275)||(21943599-21943720)
chr5 (223-275)||(1952445-1952497)
chr5 (198-271)||(4719701-4719776)
chr5 (194-275)||(7076510-7076593)
chr5 (219-275)||(9168133-9168189)
chr5 (194-278)||(7287131-7287217)
chr5 (219-275)||(22649628-22649686)
chr5 (194-278)||(26791186-26791272)
chr5 (194-278)||(28306074-28306160)
chr5 (222-278)||(35649957-35650015)
chr5 (194-278)||(36738991-36739077)
chr5 (236-278)||(13309926-13309968)
chr5 (236-278)||(17990257-17990299)
chr5 (219-278)||(19521970-19522031)
chr5 (236-278)||(20591460-20591502)
chr5 (236-278)||(22098299-22098341)
chr5 (236-278)||(37172740-37172782)
chr5 (219-278)||(39054630-39054691)
chr5 (228-278)||(14532548-14532600)
chr5 (196-278)||(21210862-21210946)
chr5 (233-278)||(22653698-22653743)
chr5 (219-273)||(29463044-29463100)
chr5 (153-206)||(38704097-38704150)
chr5 (246-278)||(10469943-10469975)
chr5 (194-275)||(27487933-27488016)
chr5 (221-278)||(38493668-38493727)
[»] chr6 (22 HSPs)
chr6 (153-242)||(20998045-20998135)
chr6 (196-278)||(2241969-2242049)
chr6 (194-278)||(5080509-5080595)
chr6 (198-278)||(22079509-22079591)
chr6 (236-278)||(30634838-30634880)
chr6 (192-278)||(17551318-17551406)
chr6 (194-271)||(11612238-11612317)
chr6 (213-278)||(25811799-25811866)
chr6 (194-271)||(26595399-26595478)
chr6 (194-278)||(552836-552922)
chr6 (219-278)||(2060602-2060661)
chr6 (194-278)||(3853249-3853335)
chr6 (194-278)||(15974651-15974737)
chr6 (194-244)||(4820446-4820496)
chr6 (236-278)||(13423012-13423054)
chr6 (236-278)||(23653879-23653921)
chr6 (236-278)||(25127818-25127860)
chr6 (196-278)||(8505717-8505801)
chr6 (237-278)||(16337909-16337950)
chr6 (194-276)||(32316870-32316954)
chr6 (236-276)||(3712605-3712645)
chr6 (153-205)||(3832582-3832634)
[»] scaffold0128 (1 HSPs)
scaffold0128 (213-278)||(10980-11045)
[»] scaffold0592 (1 HSPs)
scaffold0592 (236-275)||(956-995)
[»] scaffold0056 (1 HSPs)
scaffold0056 (194-278)||(76561-76647)
[»] scaffold0174 (1 HSPs)
scaffold0174 (240-278)||(34783-34821)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 3559155 - 3558890
Alignment:
Q  13 aatataaacgacaatagcaagccttaatttaacccatgtaaggtctttaaagcatttaaattggaggtccttttcaggtagaggaaaggagtgaaaggtt 112  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3559155 aatataaacgacaatagcaagcctcaatttaacccatgtaagttctttaaagcatttaaattggaggtccttttcaggtagaggaaaggaatgaaaggtt 3559056  T
Q  113 tgaaagaaattgaatgagtcgctttgtttttattgctcgattgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaatgaagc 212  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||||     
T  3559055 tgaaagaaattgaatgggtcgctttgtttttattgttcgattgaacaaccatttcaataacaatttatgggacaactataatttataaagaaaatgaagt 3558956  T
Q  213 agtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  3558955 agtggtacaaaaactaaagtaatagagagaaagtaaaaacataatgtgagtatgagagagaaagtt 3558890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 29359766 - 29359682
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | | ||| |||||||  ||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  29359766 tttacaaagaaaatgatgtaatggcacaaaaaccaaagcaatagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 29359682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 37685458 - 37685374
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||  |||||| | ||||  |||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  37685458 tttacaaaagaaatgaggtagtgacacaaaaatcaaagcaatagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 37685374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 37700060 - 37700144
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||  |||||| | ||||  |||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  37700060 tttacaaaagaaatgaggtagtgacacaaaaatcaaagcaatagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 37700144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 37619673 - 37619587
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | | ||| |||||||| || ||||||||||||  ||||||||| |||| |||||||||||||||||||||    
T  37619673 tttacaaaggaaatgaggtattggcacaaaaatcaacgcaatagagagagaaattaaaaagataatgtgagtatgagagagaaagtt 37619587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 8350138 - 8350224
Alignment:
Q  192 aatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||| | | ||||  |||||||  ||||||||||||||||| |||||| || | |||||||||||||||||||||    
T  8350138 aatttacaaaggaaataaggtagtgacacaaaaaccaaagcaatagagagaaagtaaaaagatcatgtgagtatgagagagaaagtt 8350224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 49065306 - 49065381
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatga 267  Q
    |||||||||||||||||| | ||| |||||||  ||||||||  ||||||||| ||||||||||| ||||||||||    
T  49065306 tttacaaagaaaatgaagtattggcacaaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatga 49065381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 649898 - 649812
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  649898 tttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 649812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 27464999 - 27465085
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  ||||||||||||||  ||| |||||| || | |||||||||||||||||||||    
T  27464999 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagacaaagtaaaaagatcatgtgagtatgagagagaaagtt 27465085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 30536094 - 30536035
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| || |||| |||||||||||| |||||| |||| |||||||||||||||||||||    
T  30536094 acaaatatcaaagtaatagagagaaagtaaaaatataatgtgagtatgagagagaaagtt 30536035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 31088310 - 31088224
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||| | ||||| |||||||  |||||||||||||||  || |||||| |||| |||||||||||||| ||||||    
T  31088310 tttacaaaaaaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagaaaaagtt 31088224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 36954752 - 36954701
Alignment:
Q  227 taaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||||| ||||||||||| |||||||||||| ||||||||    
T  36954752 taaagcaagagagagaaagtaaaaacataatgtgagtatgagaaagaaagtt 36954701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 9566927 - 9566988
Alignment:
Q  219 acaaaaattaaagcaatagag--agaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  ||||||||||||  ||||| ||||||||||| |||||||||||||||||||||    
T  9566927 acaaaaaccaaagcaatagagtgagaaagtaaaaacataatgtgagtatgagagagaaagtt 9566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 20288325 - 20288367
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | |||||||||||||||||||||||||||||||||    
T  20288325 agagagagaataaaaacataacgtgagtatgagagagaaagtt 20288367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 30570628 - 30570578
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgaga 269  Q
    |||||||| ||| ||||||||||||| ||||||||||| ||||||||||||    
T  30570628 acaaaaatcaaaacaatagagagaaagtaaaaacataatgtgagtatgaga 30570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 40612199 - 40612157
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  40612199 agagagaaaataaaaacataaagtgagtatgagagagaaagtt 40612157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 50775123 - 50775184
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  |||||||||||||||  || ||||||||||| |||||||||||||||||||||    
T  50775123 acaaaaaccaaagcaatagagagataaagtaaaaacataatgtgagtatgagagagaaagtt 50775184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 1689494 - 1689435
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||| |||||| ||||| |||| | |||| |||||||||||||||||||||    
T  1689494 acaaaaatcaaagtaatagaaagaaagtaaatatataatgtgagtatgagagagaaagtt 1689435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 275
Target Start/End: Original strand, 6949966 - 6950005
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  6949966 agagagaaattaaaaacataatgtaagtatgagagagaaa 6950005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 9988081 - 9987995
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||   | ||| |||||||| |||||||||||  |||||| |||||| |||| |||||||||| ||||||||||    
T  9988081 tttacaaataaaatgagtgattggcacaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagtt 9987995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 18434920 - 18434838
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaata--gagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| | | ||| |||||||| ||| |||||  |||||||| ||||||||||| |||| | ||||||||||||||    
T  18434920 caaagaaaatgatgtattggcacaaaaatcaaaacaataaagagagaaagtaaaaacataatgtgaatgtgagagagaaagtt 18434838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 23645540 - 23645454
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  ||| |||||||||||  || |||||| |||| |||||||||||||| ||||||    
T  23645540 tttacaaaggaaatgaggtagtggcacaaaaaccaaaacaatagagagagaaagtaaaaagataatgtgagtatgagagataaagtt 23645454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 33100937 - 33100851
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||| |||| |||||| | ||||  |||||||| ||| |||||||||||  || |||||| |||| |||||||||||||||||||||    
T  33100937 tttataaaggaaatgaggtagtgacacaaaaatcaaaacaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 33100851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 46903556 - 46903513
Alignment:
Q  235 tagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| | ||||||||||| |||||||||||||||||||||    
T  46903556 tagagagagaataaaaacataatgtgagtatgagagagaaagtt 46903513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 51718568 - 51718654
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaat--taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||||| ||||  |||||||| |||  |||||||||| |   |||||| |||| |||||||||||||||||||||    
T  51718568 tttacaaaggaaatgaagtagtgacacaaaaatcaaaataatagagagagaaggtaaaaagataatgtgagtatgagagagaaagtt 51718654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 2827696 - 2827738
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  2827696 agagagagaataaaaacataatgtgagtatgagagagaaagtt 2827738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 11897259 - 11897217
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  11897259 agagagagaataaaaacataatgtgagtatgagagagaaagtt 11897217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 12657326 - 12657265
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  |||||||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  12657326 acaaaaaccaaagcaatagaaagagaaagtaaaaagataatgtgagtatgagagagaaagtt 12657265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 14983877 - 14983816
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| |||| |||||||  |||||| ||||||||||| |||| ||||||||||||||||    
T  14983877 acaaaaactaaaacaatagagagagaaagtaaaaacataatgtgaatatgagagagaaagtt 14983816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 15059729 - 15059683
Alignment:
Q  232 caatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| | |||||| |||| |||||||||||||||||||||    
T  15059729 caatagagagagaataaaaatataatgtgagtatgagagagaaagtt 15059683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 15470042 - 15470084
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  15470042 agagagaaaataaaaagataatgtgagtatgagagagaaagtt 15470084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 18336250 - 18336190
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || ||||||| ||| |||||||||||||||||||||    
T  18336250 acaaaaatcaaagcaatagagagataaagtaaaaac-taatgtgagtatgagagagaaagtt 18336190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 21433386 - 21433428
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||    
T  21433386 agagagaaaataaaaacataatgtgagtataagagagaaagtt 21433428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 34818011 - 34818072
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||  |||||| |||||| ||||  ||||||||||||||||||||    
T  34818011 acaaaaatcaaagcaatagaaagagaaagtaaaaatataatatgagtatgagagagaaagtt 34818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 35846305 - 35846347
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | |||||||||||||||||||||||| ||||||||    
T  35846305 agagagagaataaaaacataacgtgagtatgagaaagaaagtt 35846347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 47642573 - 47642634
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||||||  |||||| ||| |  |||| |||||||||||||||||||||    
T  47642573 acaaaaattaaagcaatagaaagagaaagtaatatgataatgtgagtatgagagagaaagtt 47642634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 48858928 - 48858867
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || |||||  |||| |||||||||||||||||||||    
T  48858928 acaaaaatcaaagcaatagagagaggaagtaaaatgataatgtgagtatgagagagaaagtt 48858867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 1690523 - 1690478
Alignment:
Q  233 aatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||||||||   ||||||||||||| ||||||    
T  1690523 aatagagagaaattaaaaacatattatgagtatgagagaaaaagtt 1690478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 27787574 - 27787533
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagt 277  Q
    ||||||| | ||||||||||| ||||||||||||||||||||    
T  27787574 agagagagaataaaaacataatgtgagtatgagagagaaagt 27787533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 12999810 - 12999850
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| |||||| |||| |||||||||||||||||||||    
T  12999810 agagaaagtaaaaatataatgtgagtatgagagagaaagtt 12999850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 15082992 - 15083075
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| |||||||| | ||  |||||||  |||||||||||||||  || |||||| |||| || |||||||||||||||    
T  15082992 tttacaaaggaaatgaagtattgacacaaaaaccaaagcaatagagagagaaagtaaaaagataaagtaagtatgagagagaaa 15083075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 47113349 - 47113317
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  47113349 taaaaacataatgtgagtatgagagagaaagtt 47113317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 48326074 - 48326011
Alignment:
Q  217 gtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||| ||||| |||||||||||||||  || |||||| |||| || ||||||||||||||||||    
T  48326074 gtacgaaaatcaaagcaatagagagataaagtaaaaaaataatgtaagtatgagagagaaagtt 48326011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 32587738 - 32587814
Alignment:
Q  193 atttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgaga 269  Q
    ||||||||||||||||||  | ||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  32587738 atttacaaagaaaatgaaatattggcacaaaaaccaaagcaatagagagaaattaaaaacataatgtgagtatgaga 32587814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 20547932 - 20548015
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| |||||| | ||||| |||||||| |||||||||||||||  || |||||| |||||||||||||||||||||||    
T  20547932 tttacaaaggaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagataacgtgagtatgagagagaaa 20548015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 35377023 - 35377109
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagag--agaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | | ||| |||||||| ||||||||||||  ||||| ||||||||||| |||||| ||||||||||||||    
T  35377023 tttacaaagaaaatgatgtattggcacaaaaatcaaagcaatagagaaagaaagtaaaaacataatgtgagtgtgagagagaaagtt 35377109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 47742387 - 47742328
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||    
T  47742387 acaaaaattaaagcaatagagagaaattaaaaatataatatgagtatgagaaagaaagtt 47742328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 5114207 - 5114121
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | ||||  |||||||| |||||||||||  |||||| |||||| |||| |||||| ||||||||||||||    
T  5114207 tttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtgtgagagagaaagtt 5114121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 5244358 - 5244272
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  5244358 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagtt 5244272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 27541444 - 27541527
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| |||||| | ||||| |||||||  |||||||||||||||  || |||||| |||| ||||||||||||||||||    
T  27541444 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaa 27541527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 44413864 - 44413948
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||   | ||  |||||||  ||||||||||||||||  |||||| |||| |||||||||||||||||||||    
T  44413864 tttacaaagaaaatgagatattgacacaaaaaccaaagcaatagagagaaggtaaaaagataatgtgagtatgagagagaaagtt 44413948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 55361174 - 55361261
Alignment:
Q  193 atttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||||| | ||  |||||||  |||||||||||||||  || |||||| |||| |||||||| ||||||||||||    
T  55361174 atttacaaagaaaatgaagtattgacacaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtataagagagaaagtt 55361261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 6178392 - 6178450
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||| |||||||||||||||  || ||||||||||| ||||||||||||||||||    
T  6178392 acaaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagagaaa 6178450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 16969508 - 16969594
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| | |||||| ||| |||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  16969508 tttacaaaggaaatgaggtagtggcataaaaatcaaaacaatagaaagagaaagtaaaaagataatgtgagtatgagagagaaagtt 16969594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 41505620 - 41505534
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  41505620 tttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 41505534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 50876304 - 50876390
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||| || | | || ||||||||| |||||||||||  |||||| |||||||||||  ||||||||| ||||||||||    
T  50876304 tttacaaagaaaaagaggtattgatacaaaaatcaaagcaatagaaagagaaaataaaaacataatatgagtatgatagagaaagtt 50876390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 271
Target Start/End: Original strand, 52564549 - 52564668
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatata-atttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaa 251  Q
    ||||||||||||||| || ||||||||| ||||||  ||| ||||||||||||||  | | | ||| || ||||  |||||||| ||||  || ||||||    
T  52564549 ttgaacaaccatttctatgacaacttatgggacaaccatagatttacaaagaaaagtaggtattggcactaaaaccaaagcaatggagaagaagtaaaaa 52564648  T
Q  252 cataacgtgagtatgagaga 271  Q
    ||||| ||||||||||||||    
T  52564649 cataatgtgagtatgagaga 52564668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 34456895 - 34456834
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||||||||||  || |||||| ||||  ||||||||||||||||||||    
T  34456895 acaaaaattaaagcaatagagagagaaagtaaaaagataatatgagtatgagagagaaagtt 34456834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 42358605 - 42358666
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  42358605 acaaaaatcaaagcaatagagagataaagtaaaaagataatgtgagtatgagagagaaagtt 42358666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 48353105 - 48353040
Alignment:
Q  215 tggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| |||||||||||||||  || |||||| ||||  ||||||||||||||||||||    
T  48353105 tggtacaaaaatcaaagcaatagagagagaaagtaaaaatataatatgagtatgagagagaaagtt 48353040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 48405496 - 48405454
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  48405496 agagagaaagtaaaaacataatgtgagtatgagagagaaagtt 48405454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 17550240 - 17550183
Alignment:
Q  222 aaaattaaagcaatagagagaaattaaaaa-cataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| |||||||||||| |||||| ||||  |||||||||||||||||||||    
T  17550240 aaaattaaagtaatagagagaaagtaaaaaacatagtgtgagtatgagagagaaagtt 17550183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 46966088 - 46966128
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  46966088 agagaaagtaaaaacataacgtgagtatgagaaagaaagtt 46966128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 19149119 - 19149033
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaata--gagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||   ||||| |||||||  ||| |||||  |||||||| |||||| |||| |||||||||||||||||||||    
T  19149119 tttacaaaggaaatgagttagtggcacaaaaaccaaaacaataaagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 19149033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 32205724 - 32205638
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||| ||||||||||||| |||| | ||||||  |||||||||||  |||||| |||||| |||| ||| |||||||||| ||||||    
T  32205724 tttataaagaaaatgaagtagtgatgcaaaaaccaaagcaatagagagagaaaataaaaagataatgtgggtatgagagataaagtt 32205638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 36670956 - 36671042
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||  |||||| | ||||| |||||||  ||||||||||||||  ||| |||||| |||| |||||||||||||| ||||||    
T  36670956 tttacaaatgaaatgaggtagtggcacaaaaaccaaagcaatagagagaaaaagtaaaaagataatgtgagtatgagagaaaaagtt 36671042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 38926757 - 38926671
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||| | | ||||  |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  38926757 tttacaaaggaaataaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 38926671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 44856082 - 44855996
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||| |||| ||||||||||  || ||||||  ||| ||||||||||| |||||||||    
T  44856082 tttacaaaggaaatgaggtagtggcacaaaaatcaaagaaatagagagagaaagtaaaaaggtaatgtgagtatgagtgagaaagtt 44855996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 47472458 - 47472372
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| ||||||| |||| ||| |||||||  || |||||| ||||  ||||||||||||||||||||    
T  47472458 tttacaaaggaaatgaggtagtggcacaaaaactaaaacaacagagagagaaagtaaaaagataatatgagtatgagagagaaagtt 47472372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 50314710 - 50314671
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  50314710 agagagaaagtaaaaacataatgtgagtatgagagagaaa 50314671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 288830 - 288769
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  |||||||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  288830 acaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagtt 288769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 1340148 - 1340198
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgaga 269  Q
    |||||||| ||||||||||||||||| | |||||| || ||||||||||||    
T  1340148 acaaaaatcaaagcaatagagagaaaatgaaaacacaatgtgagtatgaga 1340198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 7294085 - 7294127
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  7294085 agagagagaataaaaacataatgtgagtatgagagagaaagtt 7294127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 9557908 - 9557950
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  9557908 agagagagaataaaaacataatgtgagtatgagagagaaagtt 9557950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 14207224 - 14207285
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || | || |||||| |||||||||||||||||||||    
T  14207224 acaaaaatcaaagcaatagagagagaaaatgaagacataatgtgagtatgagagagaaagtt 14207285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 14214972 - 14215033
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || | || |||||| |||||||||||||||||||||    
T  14214972 acaaaaatcaaagcaatagagagagaaaatgaagacataatgtgagtatgagagagaaagtt 14215033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 16295549 - 16295507
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  16295549 agagagaaaataaaaatataatgtgagtatgagagagaaagtt 16295507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 26014897 - 26014855
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  26014897 agagagaaagtaaaaagataatgtgagtatgagagagaaagtt 26014855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 26452708 - 26452750
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  26452708 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 26452750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 278
Target Start/End: Complemental strand, 27511798 - 27511768
Alignment:
Q  248 aaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||||||||||||||||    
T  27511798 aaaacataacgtgagtatgagagagaaagtt 27511768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 28700565 - 28700504
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  |||||||||||  |||||| ||||||||||| |||||||||||||| ||||||    
T  28700565 acaaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagataaagtt 28700504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30805589 - 30805631
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||    
T  30805589 agagagaaaataaaaacataatgtgagtatgagagaggaagtt 30805631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 35597247 - 35597205
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  35597247 agagagaaagtaaaaaaataatgtgagtatgagagagaaagtt 35597205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 39629824 - 39629862
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  39629824 agagagaaagtaaaaacataatgtgagtatgagagagaa 39629862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 47276314 - 47276272
Alignment:
Q  233 aatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||||| | |||||| |||||||||||||||||||||||    
T  47276314 aatagagagagagtaaaaatataacgtgagtatgagagagaaa 47276272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 52714838 - 52714777
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || |||||| |||| || ||||||||||||||||||    
T  52714838 acaaaaatcaaagcaatagagagagaaagtaaaaatataatgtaagtatgagagagaaagtt 52714777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 55322702 - 55322744
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||    
T  55322702 agagagaaagtaaaaacataatgtgagtatgggagagaaagtt 55322744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 9692853 - 9692769
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| | | ||||||  |||||||| |||||||||||||||  || |||||  |||| |||| ||||||||||||||||    
T  9692853 tacaaagaaagttaggcagtgacacaaaaatcaaagcaatagagagagaaagtaaaatgataatgtgaatatgagagagaaagtt 9692769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 34057853 - 34057906
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaa 206  Q
    |||||||||||||| | | ||||||| |||||||| ||||||||| ||||||||    
T  34057853 ttgaacaaccatttgattgacaacttttaggacaactataatttataaagaaaa 34057906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 34145524 - 34145565
Alignment:
Q  235 tagagagaaattaaaaacataacgtgagtatgagagagaaag 276  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  34145524 tagagataaaataaaaacataacgtgagtatgaaagagaaag 34145565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 35299777 - 35299878
Alignment:
Q  156 aacaaccatttcaataacaacttataggacaaatat-aatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacat 254  Q
    ||||| ||||| ||| |||| || ||||||||  || |||||| ||||||||||| | | ||  |||||||| ||||||||||||||||| |||||| ||    
T  35299777 aacaagcattttaatgacaatttttaggacaacaatgaatttataaagaaaatgaggtattgacacaaaaatcaaagcaatagagagaaaataaaaatat 35299876  T
Q  255 aa 256  Q
    ||    
T  35299877 aa 35299878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 42357026 - 42357103
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagaga 271  Q
    ||||||||| |||||| | ||||  |||||||  ||||||||||||||| | |||||| || | ||||||||||||||    
T  42357026 tttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagagtaaaaagatcatgtgagtatgagaga 42357103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 11630692 - 11630776
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||| | || || |||||  |||| |||||||||||| |||||| ||||   |||||||| ||| ||||||    
T  11630692 tttacaaagaaaatgaagtattgatataaaaaccaaagtaatagagagaaagtaaaaatataataagagtatgaaagaaaaagtt 11630776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 13712888 - 13712812
Alignment:
Q  193 atttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgaga 269  Q
    |||||||||||||||||  || ||| |||||||   ||  |||||||||||| |||||| |||||||||| ||||||    
T  13712888 atttacaaagaaaatgatacattggcacaaaaaccgaaataatagagagaaagtaaaaatataacgtgagaatgaga 13712812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 14847503 - 14847543
Alignment:
Q  235 tagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  14847503 tagagagagaataaaaacataatgtgagtatgagagagaaa 14847543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 25641558 - 25641598
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| ||||||||||| |||||||||||||| ||||||    
T  25641558 agagaaagtaaaaacataatgtgagtatgagagacaaagtt 25641598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 26996407 - 26996360
Alignment:
Q  230 agcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| ||| |||||| |||| |||||||||||||||||||||    
T  26996407 agcaatagagataaagtaaaaa-ataatgtgagtatgagagagaaagtt 26996360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 41309246 - 41309198
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga 242  Q
    |||||||||||||||| | ||||  |||||||| |||||||||||||||    
T  41309246 tttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagaga 41309198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 43720484 - 43720428
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||| |||||||||||||| ||| |||||| |||| || ||||| |||||||||    
T  43720484 acaaaaaataaagcaatagagaaaaaataaaaatataatgtaagtattagagagaaa 43720428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 44463440 - 44463400
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| |||||| |||| |||||||||||||||||||||    
T  44463440 agagaaaataaaaatataatgtgagtatgagagagaaagtt 44463400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 45711381 - 45711464
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||||||||||||| | ||  |||| ||  ||| ||||  ||||||||| |||||| |||| ||||||||||||||||||    
T  45711381 tttacaaagaaaatgaagtattgacacaataaccaaaacaatagagagagaaagtaaaaagataatgtgagtatgagagagaaa 45711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 52939780 - 52939701
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagaga 271  Q
    ||||||||| |||||| | ||||| |||||||  |||||||||||  |||||| |||||| || | ||||||||||||||    
T  52939780 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagatcatgtgagtatgagaga 52939701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 8848643 - 8848723
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| | | |||||||||||| ||||||||||||||||| ||||||||| | |||||| ||||||||||||||    
T  8848643 caaagaaaatgatgtattggtacaaaaatcaaagcaatagagagaaagtaaaaacatgatgtgagtgtgagagagaaagtt 8848723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 9990820 - 9990734
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||||| |||||||||||||  |||||||||||  |||||| |||||| |||| |||||||| ||||||||||||    
T  9990820 tttacaaaggaaatgaagtagtggtacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtataagagagaaagtt 9990734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 6842522 - 6842582
Alignment:
Q  215 tggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||||||||||| ||||||||| || |||||| |||| ||||||||||||||||||    
T  6842522 tggtacaaaaattaaagtaatagagaggaaataaaaatataatgtgagtatgagagagaaa 6842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 9207719 - 9207633
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  9207719 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagtt 9207633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 22416342 - 22416256
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| ||||||| |||||||  |||||||||||  |||||| |||||| |||| || |||||| |||||||||||    
T  22416342 tttacaaagaaaatgaggcagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtaagtatgggagagaaagtt 22416256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 36587431 - 36587496
Alignment:
Q  213 agtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| |||||||| ||||||||||||||| | |||||  |||| |||||||||||||||||||||    
T  36587431 agtggcacaaaaatcaaagcaatagagagagagtaaaatgataatgtgagtatgagagagaaagtt 36587496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 19109039 - 19109118
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||| |||||||| ||||| |||||||| ||||||||  ||||||||| |||||| |||| || |||||||||||||||    
T  19109039 caaaggaaatgaagtagtggcacaaaaatcaaagcaatagagagagaaaataaaaagataatgtaagtatgagagagaaa 19109118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 9647261 - 9647175
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||||| ||||  |||||||  |||||||||||||||  || |||||| ||||  ||||||||||||||||||||    
T  9647261 tttacaaaggaaatgaagtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatatgagtatgagagagaaagtt 9647175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 18254151 - 18254237
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||   ||||| |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  18254151 tttacaaaggaaatgagatagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 18254237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 27490672 - 27490758
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagag--agaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | | |   |||||||| ||||||||||||  |||||||||||||||||  ||||| ||||||||||||||    
T  27490672 tttacaaagaaaatgatgtattaacacaaaaatcaaagcaatagagagagaaattaaaaacataatatgagtgtgagagagaaagtt 27490758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 275
Target Start/End: Original strand, 33737319 - 33737358
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  33737319 agagagaaagtaaaaacataacgtgagtatgagagagaaa 33737358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 34945032 - 34945118
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||  |||||| | ||||| |||||||| |||||||||||||||  || |||||| || | |||||||||||||||||||||    
T  34945032 tttacaaaagaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagatcatgtgagtatgagagagaaagtt 34945118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 7084677 - 7084742
Alignment:
Q  215 tggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| |||||||||||  |||||| |||||| ||||  ||||||||||||||||||||    
T  7084677 tggtacaaaaatcaaagcaatagaaagagaaagtaaaaatataatatgagtatgagagagaaagtt 7084742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 12784384 - 12784426
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  12784384 agagagaaagtaaaaatataacgtgagtatgagagagaaagtt 12784426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 12889799 - 12889859
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  ||||||||| |||| |||||||||||||||||||||    
T  12889799 acaaaaatcaaagcaatagagagataaattaaaaa-ataatgtgagtatgagagagaaagtt 12889859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 278
Target Start/End: Original strand, 23352807 - 23352932
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaatgaa-gcagtggtacaaaaattaaagcaatagagagaaattaaaaa 251  Q
    ||||||||||||||   | ||||||||| ||||||  ||||||||||||||||| | | | | | | || ||||  ||||||||||||| ||| ||||||    
T  23352807 ttgaacaaccatttggttgacaacttatgggacaaccataatttacaaagaaaaagtatgtatttgcacgaaaaccaaagcaatagagataaagtaaaaa 23352906  T
Q  252 cataacgtgagtatgagagagaaagtt 278  Q
     |||| |||||||||||||||||||||    
T  23352907 -ataatgtgagtatgagagagaaagtt 23352932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 275
Target Start/End: Original strand, 33583130 - 33583247
Alignment:
Q  160 accatttcaataacaacttataggacaaatataatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacata--ac 257  Q
    ||||||| ||| | ||||||| | |||| ||||||||||||||||||||| | | ||  | |||||  ||| ||||||||||||| ||||||||||  |     
T  33583130 accattttaatgataacttatggaacaactataatttacaaagaaaatgaggtattgacaaaaaaaacaaaacaatagagagaaagtaaaaacataatat 33583229  T
Q  258 gtgagtatgagagagaaa 275  Q
    |||||||||| |||||||    
T  33583230 gtgagtatgaaagagaaa 33583247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 6049287 - 6049372
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaa-acataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | | ||| |||||||  ||||||| ||||||||| ||||| | |||| |||||||||||||||||||||    
T  6049287 tttacaaaggaaatgaggtattggcacaaaaaccaaagcaagagagagaaagtaaaataaataatgtgagtatgagagagaaagtt 6049372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 9760137 - 9760061
Alignment:
Q  204 aaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||| | ||||| ||||||  ||||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  9760137 aaatgaggtagtggcacaaaatctaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 9760061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 21611621 - 21611686
Alignment:
Q  213 agtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| |||||||| ||||||||||||||||| |||||| ||||  ||| ||||||| ||||||||    
T  21611621 agtggcacaaaaatcaaagcaatagagagaaagtaaaaagataatatgaatatgagaaagaaagtt 21611686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 278
Target Start/End: Complemental strand, 39147937 - 39147809
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataa-tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaa 249  Q
    |||||||||||||| ||| ||||||| | ||||||  |||| |||||||| ||||||| | | ||  |||||||| ||| ||||| |  |||||| ||||    
T  39147937 ttgaacaaccattttaatgacaacttttgggacaatcataaatttacaaaaaaaatgaggtattgacacaaaaatcaaaacaatacaaagagaaagtaaa 39147838  T
Q  250 aacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| |||| ||||| ||||||||||    
T  39147837 aacataatgtgaatatgaaagagaaagtt 39147809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 18846736 - 18846657
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||| ||||||| | | |||||||||||| |||| ||||||||||  || ||||||||||| |||||| |||||||||||    
T  18846736 caaaaaaaatgatgtattggtacaaaaatcaaagtaatagagagagaaagtaaaaacataaagtgagtgtgagagagaaa 18846657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 45259251 - 45259312
Alignment:
Q  215 tggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| ||||||||||||||  | |||||| ||||||||||||||||| | ||||||    
T  45259251 tggtacaaaaatcaaagcaatagagag--agtaaaaatataacgtgagtatgagataaaaagtt 45259312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 4858199 - 4858156
Alignment:
Q  235 tagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||    
T  4858199 tagagagaaaataaaaacataatgtgagtatgacagagaaagtt 4858156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 6336355 - 6336296
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  ||||| ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  6336355 acaaaaaccaaagcgatagagagaaaataaaaatataatatgagtatgagagagaaagtt 6336296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 6511380 - 6511294
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||| |||| |||||| | ||||  |||||||  |||||||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  6511380 tttataaaggaaatgaggtagtgacacaaaaaccaaagcaatagaaagagaaaataaaaagataatgtgagtatgagagagaaagtt 6511294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 10833623 - 10833666
Alignment:
Q  228 aaagcaatagagagaaattaaaaacataacgtgagtatgagaga 271  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||    
T  10833623 aaagcaatagagagaaagtaaaaaaataatgtgagtatgagaga 10833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 13266051 - 13266012
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  13266051 agagataaaataaaaacataacgtgagtatgagagagaaa 13266012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 29449341 - 29449255
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||  | ||| | | |||||||| |||| ||||||||||  || |||||| |||| |||||||||||||||||||||    
T  29449341 tttacaaagaaaagtatgcatttgcacaaaaatcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagtt 29449255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 34373091 - 34373048
Alignment:
Q  235 tagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| | ||||||||||| |||||||||||||||||||||    
T  34373091 tagagagagaataaaaacataatgtgagtatgagagagaaagtt 34373048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 43487508 - 43487422
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagaga--gaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||  |||||||||||||  |||| |||||| |||| ||||| |||||||||||||||    
T  43487508 tttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagaaagaaagtaaaaaaataatgtgagcatgagagagaaagtt 43487422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 2144824 - 2144763
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  |||||||||||||||  ||||||||||| || ||||||||| |||||||||||    
T  2144824 acaaaaaccaaagcaatagagagataaattaaaaacaaaatgtgagtatgggagagaaagtt 2144763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 10472133 - 10472175
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  10472133 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 10472175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 19642723 - 19642654
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtat 265  Q
    |||||||||||||||| ||  |||||||| |||||||||||  |||||| | ||||||||| ||||||||    
T  19642723 caaagaaaatgaagcattgacacaaaaatcaaagcaatagagagagaaagtgaaaacataatgtgagtat 19642654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 20247853 - 20247895
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  20247853 agagagagaataaaaacataatgtgagtatgagagagaaagtt 20247895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 33780295 - 33780349
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaat 207  Q
    |||||||||||||| | |||||||||||| |||||  ||| ||||||||||||||    
T  33780295 ttgaacaaccatttgactaacaacttatacgacaaccatagtttacaaagaaaat 33780349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 40721856 - 40721814
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  40721856 agagagagaataaaaacataatgtgagtatgagagagaaagtt 40721814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 43725290 - 43725248
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  43725290 agagagagaataaaaacataatgtgagtatgagagagaaagtt 43725248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 7121466 - 7121422
Alignment:
Q  233 aatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||    
T  7121466 aatagagagaa-taaaaaacataatgtgagtatgagagagaaagtt 7121422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 275
Target Start/End: Complemental strand, 34215434 - 34215311
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaat--taaaa 250  Q
    |||||||| ||||||||| | ||||| | ||||||  || ||||| ||||| ||||||| | ||  ||||||| || ||||||||| |||||   |||||    
T  34215434 ttgaacaatcatttcaatgataactttt-ggacaaccattatttataaagacaatgaagtattgacacaaaaactatagcaatagaaagaaaaagtaaaa 34215336  T
Q  251 acataacgtgagtatgagagagaaa 275  Q
    |||||| |||| |||||||||||||    
T  34215335 acataatgtgaatatgagagagaaa 34215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 3838822 - 3838870
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga 242  Q
    ||||||||| |||||||||||||  |||||||| ||| |||||||||||    
T  3838822 tttacaaaggaaatgaagcagtgacacaaaaatcaaaacaatagagaga 3838870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 7367957 - 7367913
Alignment:
Q  234 atagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||| || |||||||||||||| ||||||    
T  7367957 atagagagaaagtaaaaacacaatgtgagtatgagagataaagtt 7367913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 9194326 - 9194286
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaag 276  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  9194326 agagagaaagtaaaaagataatgtgagtatgagagagaaag 9194286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 11229317 - 11229349
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  11229317 taaaaacataatgtgagtatgagagagaaagtt 11229349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 13850180 - 13850212
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  13850180 taaaaacataatgtgagtatgagagagaaagtt 13850212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 21738584 - 21738640
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||  |||||||| || ||||| |||||| |||| ||||||||||||||||||    
T  21738584 acaaaaaccaaagcaattgaaagaaagtaaaaatataatgtgagtatgagagagaaa 21738640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 24727490 - 24727458
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  24727490 taaaaacataatgtgagtatgagagagaaagtt 24727458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 36774645 - 36774582
Alignment:
Q  217 gtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||| ||||| |||||||||||||||  || |||||| |||| |||| ||||||||||||||||    
T  36774645 gtactaaaatcaaagcaatagagagagaaagtaaaaatataatgtgaatatgagagagaaagtt 36774582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 40599262 - 40599305
Alignment:
Q  234 atagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||    
T  40599262 atagagagaaagtaaaaatataacgtgagtatg-gagagaaagtt 40599305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 22925251 - 22925310
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  22925251 acaaaaattaaagcaatatagagaaattaaaaacataatgtgagtatgagagagatagtt 22925310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 4292557 - 4292475
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaa 274  Q
    |||||||||||||| ||  | |||||||||||| |||||||||||||||  || ||||||||||| |||||||||||||||||    
T  4292557 tttacaaagaaaattaaatattggtacaaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagagaa 4292475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 41863571 - 41863655
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||| | | ||| |||||||  ||||||||| ||||||||||||||||||| ||||||| |||||| ||||||    
T  41863571 tttacaaataaaatgaggtattggcacaaaaaacaaagcaataaagagaaattaaaaacataatgtgagtacgagagataaagtt 41863655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 1284518 - 1284459
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||| | ||||||||    
T  1284518 acaaaaattaaagcaatagagagaaagtaaaaacataatgtaagtatgaaaaagaaagtt 1284459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 39497201 - 39497312
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatat-aatttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaa 249  Q
    |||||||||||||||||| | |||||||| |||||  || ||| |||||||||||||||  | |||||||||||  ||||||||  ||||||||| ||||    
T  39497201 ttgaacaaccatttcaatgataacttataagacaaccattaatgtacaaagaaaatgaaataatggtacaaaaaccaaagcaataaagagagaaagtaaa 39497300  T
Q  250 aacataacgtga 261  Q
    ||| ||| ||||    
T  39497301 aacgtaatgtga 39497312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 38259166 - 38259107
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||| ||||||||||||| ||||||||||| || ||||||| ||||||||||    
T  38259166 acaaaaatcaaaacaatagagagaaagtaaaaacataatgttagtatgaaagagaaagtt 38259107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 44895514 - 44895600
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  ||||||||  ||||||||| |||||| ||||||||| ||||||| ||||||||    
T  44895514 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataacgtgaatatgagatagaaagtt 44895600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 41989693 - 41989770
Alignment:
Q  203 aaaatgaagcagtggtacaaaaattaaagcaata--gagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||| |||||||  |||||||||  |||||||| |||||| |||| |||||||||||||||||||||    
T  41989693 aaaatgaggtagtggcacaaaaaccaaagcaataaagagagaaagtaaaaatataatgtgagtatgagagagaaagtt 41989770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 47448954 - 47448870
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaatagaga--gaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| | | | ||||| |||||||  |||||||||||||  |||| |||||||| || |||||||||||||||||||||    
T  47448954 tacaaagaaatttaggtagtggcacaaaaaccaaagcaatagagaaagaaagtaaaaacacaatgtgagtatgagagagaaagtt 47448870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 3937065 - 3937149
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||| |||| |||||| | | ||| |||||||  |||| |||||||| ||| |||||| |||| |||||||||||||||||||||    
T  3937065 tttataaaggaaatgaggtattggcacaaaaaccaaagtaatagagataaagtaaaaagataatgtgagtatgagagagaaagtt 3937149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 7077749 - 7077781
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||||||||||||||||||    
T  7077749 taaaaacataacgtgagtatgagagagaaagtt 7077781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 38956560 - 38956639
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagaga 271  Q
    ||||||||| |||||| | ||||| |||||||  ||||||||  ||||||||| |||||| |||| ||||||||||||||    
T  38956560 tttacaaaggaaatgaggtagtggcacaaaaaacaaagcaatagagagagaaagtaaaaagataatgtgagtatgagaga 38956639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 30064540 - 30064497
Alignment:
Q  222 aaaattaaagcaatagagagaaattaaaaacataacgtgagtat 265  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  30064540 aaaatcaaagcaatagagagaaagtaaaaacataatgtgagtat 30064497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 37970017 - 37969974
Alignment:
Q  235 tagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| | ||||||||||| |||||||||||||||||||||    
T  37970017 tagagagagaataaaaacataatgtgagtatgagagagaaagtt 37969974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 40854621 - 40854679
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||| |||||||||||||||  || |||||| |||| ||||||||||||||||||    
T  40854621 acaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgagagagaaa 40854679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 41189485 - 41189571
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | | ||  ||||||| ||||||||||||||||  || |||||| |||| |||||||||||| ||||||||    
T  41189485 tttacaaaggaaatgaggtattgacacaaaaactaaagcaatagagagagaaagtaaaaagataatgtgagtatgagaaagaaagtt 41189571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 41458885 - 41458928
Alignment:
Q  235 tagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| | ||||||||||| |||||||||||||||||||||    
T  41458885 tagagagagaataaaaacataatgtgagtatgagagagaaagtt 41458928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 275
Target Start/End: Complemental strand, 47379665 - 47379622
Alignment:
Q  232 caatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||    
T  47379665 caatagagagagactaaaaacataatgtgagtatgagagagaaa 47379622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 155967 - 156009
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  155967 agagagagaataaaaacataatgtgagtatgagagagaaagtt 156009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 28548207 - 28548249
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  28548207 agagagagaataaaaacataatgtgagtatgagagagaaagtt 28548249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 30941471 - 30941429
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  30941471 agagagaaagtaaaaagataatgtgagtatgagagagaaagtt 30941429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 43942741 - 43942680
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  |||||||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  43942741 acaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 43942680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 44189296 - 44189338
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  44189296 agagagaaagtaaaaagataatgtgagtatgagagagaaagtt 44189338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 44651193 - 44651243
Alignment:
Q  215 tggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtat 265  Q
    ||||||||||||||||| |||||||||||| |||||| |||| || |||||    
T  44651193 tggtacaaaaattaaagtaatagagagaaagtaaaaatataatgtaagtat 44651243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 47954064 - 47954129
Alignment:
Q  215 tggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| ||||  ||| ||||| |||||| |||| |||||||||| ||||||||||    
T  47954064 tggtacaaaaattaaaacaataaagaaagaaagtaaaaatataatgtgagtatgaaagagaaagtt 47954129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 34108825 - 34108879
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||| |||||| ||||||||   ||||||||||| ||||||||||||||||||    
T  34108825 acaaaaatcaaagcagtagagagag--taaaaacataatgtgagtatgagagagaaa 34108879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 34978424 - 34978340
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| | | | ||||| |||||||  |||||||||||||||  || |||||  |||| |||||||||||||||||||||    
T  34978424 tacaaagaaatttaggtagtggcacaaaaaacaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaagtt 34978340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 41650810 - 41650753
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaag 276  Q
    |||||||  ||| ||||||||||||| |||||||| || |||||||||||||| ||||    
T  41650810 acaaaaaccaaaacaatagagagaaagtaaaaacaaaatgtgagtatgagagaaaaag 41650753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 42584898 - 42584846
Alignment:
Q  228 aaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  42584898 aaagcaatagagagataaagtaaaaatataatgtgagtatgagagagaaagtt 42584846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 640467 - 640435
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  640467 taaaaacataatgtgagtatgagagagaaagtt 640435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 32529798 - 32529882
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | |||| || |||||  ||||||||| ||||||| |||||| || |  ||| ||||||||||||||||    
T  32529798 tttacaaaggaaatgaggtagtgataaaaaaaccaaagcaataaagagaaagtaaaaagatcatctgaatatgagagagaaagtt 32529882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 40227162 - 40227194
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  40227162 taaaaacataatgtgagtatgagagagaaagtt 40227194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 45607099 - 45607067
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  45607099 taaaaacataatgtgagtatgagagagaaagtt 45607067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 10250457 - 10250543
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||| ||||| |||||||  ||||||||  ||||||||| |||||| |||| |||||||||||||||||||||    
T  10250457 tttacaaagaaaatgaagtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 10250543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 38792854 - 38792917
Alignment:
Q  215 tggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  38792854 tggtacaaaaatcaaagcaatagagagaaagtaaaaatataatgtgagtatgagagagaaagtt 38792917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 40693591 - 40693646
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  40693591 acaaaaattaaagcaatagagagaaagtaaaaacataatgtgagtatgagagagaa 40693646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 24045347 - 24045292
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  24045347 acaaaaatcaaagcaatagagagaaagtaaaaacataatgtgagtatgagagagaa 24045292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 27354296 - 27354382
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||||| | |||||||||||| ||| ||||  ||||| ||| ||||||||||| |||||||||||||| ||||||    
T  27354296 tttacaaaaaaaatgaaggattggtacaaaaatcaaaacaattgagagaaaaagtaaaaacataatgtgagtatgagagataaagtt 27354382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 6520813 - 6520859
Alignment:
Q  232 caatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  6520813 caatagagagaaagtaaaaacataatgtgagtatgagagagaaagtt 6520859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 39606071 - 39606010
Alignment:
Q  219 acaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  39606071 acaaaaattaaagcaatagagagggaaaataaaaagataatgtgagtatgagagagaaagtt 39606010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 1627498 - 1627586
Alignment:
Q  192 aatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||| | | ||| |||||||  ||||||| ||||||  ||| ||||||||||| | |||||||||||||||||||    
T  1627498 aatttacaaagaaaatgaggtattggcacaaaaaccaaagcaacagagagggaaagtaaaaacataatgcgagtatgagagagaaagtt 1627586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 26492136 - 26492052
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||||| ||||| |||||||  ||||||||||||||||  |||||| ||||  ||| ||||||||| ||||||    
T  26492136 tttacaaaggaaatgaagtagtggcacaaaaaccaaagcaatagagagaagataaaaagataatctgaatatgagagataaagtt 26492052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 31574881 - 31574964
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||||||||| | | | || ||||||||| |||||||||||||||  || |||||| |||| ||||||||||||||||||    
T  31574881 tttacaaagaaaatcatgtattgatacaaaaatcaaagcaatagagagagaaaataaaaatataatgtgagtatgagagagaaa 31574964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 36178035 - 36177952
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagaga--gaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||| |||| |||||| | |||||||||||||  |||||||||||||  |||| |||||| |||| ||||||||||||||||||    
T  36178035 tttataaaggaaatgaggtagtggtacaaaaaccaaagcaatagagaaagaaagtaaaaagataatgtgagtatgagagagaaa 36177952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 44539863 - 44539779
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||  ||||||||||||||||| |||||| ||||  | ||||||||||||||||||    
T  44539863 tttacaaaggaaatgaggtagtgtcacaaaaaccaaagcaatagagagaaaataaaaagataatataagtatgagagagaaagtt 44539779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 26732354 - 26732268
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | ||||| |||||||  ||| |||||||||||  || |||||| |||| |||||||||||||| ||||||    
T  26732354 tttacaaagaaaatgaggtagtggcacaaaaaccaaaacaatagagagagaaaataaaaagataatgtgagtatgagagataaagtt 26732268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 38381039 - 38381101
Alignment:
Q  215 tggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||||||| |||||||||||||||  || ||||||||||| || |||||||||||||||    
T  38381039 tggtacaaaaatcaaagcaatagagagagaaaataaaaacataatgtaagtatgagagagaaa 38381101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 51986171 - 51986085
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  |||| ||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  51986171 tttacaaaggaaatgaggtagtggcacaaaaaccaaagaaatagatagagaaagtaaaaagataatgtgagtatgagagagaaagtt 51986085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 5249954 - 5249912
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  5249954 agagagaaagtaaaaacataatgtgagtatgagagagaaagtt 5249912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 23369275 - 23369360
Alignment:
Q  195 ttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||| | ||||| |||||||  ||||||||||||||  ||| |||||| |||| ||||||| |||||||||||||    
T  23369275 ttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagataaagtaaaaagataatgtgagtaagagagagaaagtt 23369360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 42490994 - 42490952
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  42490994 agagagaaagtaaaaacataatgtgagtatgagagagaaagtt 42490952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 51324568 - 51324610
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  51324568 agagagaaagtaaaaacataacgtgagtatgaaagagaaagtt 51324610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 52223314 - 52223237
Alignment:
Q  190 ataatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatga 267  Q
    |||||||||||||||||||| | | || ||||||||  ||| ||||| ||||||| ||||||||||  ||||||||||    
T  52223314 ataatttacaaagaaaatgaggtattgatacaaaaaccaaaacaatacagagaaagtaaaaacatattgtgagtatga 52223237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 53801701 - 53801774
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatga 267  Q
    ||||||||| |||||| | | ||  ||||||| |||||||||||||||||| |||||| |||| ||||||||||    
T  53801701 tttacaaaggaaatgaggtattgacacaaaaactaaagcaatagagagaaagtaaaaagataatgtgagtatga 53801774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 11068817 - 11068738
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagaga 271  Q
    ||||||||| |||||| ||||||  |||||||| |||||||||||  |||||| |||||| |||| |||| |||||||||    
T  11068817 tttacaaaggaaatgaggcagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgaatatgagaga 11068738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 29891928 - 29891888
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  29891928 agagaaactaaaaacataatgtgagtatgagagagaaagtt 29891888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 37997383 - 37997304
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagaga 271  Q
    |||||||||||||||| | | ||  |||||||| |||||||||||  |||||| |||||| |||| ||||||||||||||    
T  37997383 tttacaaagaaaatgaggtattgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtatgagaga 37997304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 149414 - 149512
Alignment:
Q  182 ggacaaatataatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||| || ||| |||||||||| | | | ||||  ||||||| ||||||||||||||||  || |  |||||||| |||||||||||||||||||||    
T  149414 ggacaactaaaatatacaaagaaatttaggtagtgacacaaaaactaaagcaatagagagagaaagttgaaacataatgtgagtatgagagagaaagtt 149512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 5622587 - 5622501
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||| | |||||||  ||||||||||||||  ||| |||||| |||| |||||||||| ||||||||||    
T  5622587 tttacaaaggaaatgaggtagttgcacaaaaaccaaagcaatagagagaaaaagtaaaaagataatgtgagtatgaaagagaaagtt 5622501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 29175329 - 29175270
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  ||||||| ||||||||| |||||| |||| |||||||||||||| ||||||    
T  29175329 acaaaaaccaaagcaagagagagaaagtaaaaagataatgtgagtatgagagaaaaagtt 29175270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 43175113 - 43175027
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||  ||||| |||||||||  || |||||| |||| |||||||||||||||||||||    
T  43175113 tttacaaaggaaatgaggtagtgacacaaaaaccaaagccatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagtt 43175027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 46634229 - 46634143
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||| |||| ||||||  |||||| |||||| |||| |||||||||||||| ||||||    
T  46634229 tttacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagaaagagaaagtaaaaagataatgtgagtatgagagataaagtt 46634143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 56557827 - 56557780
Alignment:
Q  228 aaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||||||||||  |||||||| || ||||||||||||||||||    
T  56557827 aaagcaatagagagaaggtaaaaacacaatgtgagtatgagagagaaa 56557780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 1031840 - 1031798
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  1031840 agagagagaataaaaacataatgtgagtatgagagagaaagtt 1031798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 2109517 - 2109475
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||    
T  2109517 agagagaaagtaaaaacataatgtgagtatgaaagagaaagtt 2109475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 2575766 - 2575816
Alignment:
Q  228 aaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||| ||| |||||||  |||||||| |||||||||||    
T  2575766 aaagcaatagagagaaagtaacaacataatatgagtatgtgagagaaagtt 2575816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 5386477 - 5386416
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || |||||  |||| |||||||||||||||||||||    
T  5386477 acaaaaatcaaagcaatagagagagaaagtaaaagaataatgtgagtatgagagagaaagtt 5386416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 19232100 - 19232157
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaa 274  Q
    |||||||| |||||||||||||||  || |||||| |||| |||||||||||||||||    
T  19232100 acaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgagagagaa 19232157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 34538015 - 34537973
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  34538015 agagagagaataaaaacataatgtgagtatgagagagaaagtt 34537973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 37060411 - 37060361
Alignment:
Q  228 aaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||  |||||| |||| |||| ||||||||||||||||    
T  37060411 aaagcaatagagagaaggtaaaaatataatgtgaatatgagagagaaagtt 37060361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 44257715 - 44257757
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  44257715 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 44257757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 49585080 - 49585038
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  49585080 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 49585038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 50890040 - 50890101
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  ||  ||||| |||| |||||||||||||||||||||    
T  50890040 acaaaaatcaaagcaatagagagagaaagcaaaaatataatgtgagtatgagagagaaagtt 50890101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 2999283 - 2999230
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaa 206  Q
    |||||||||||||| | | ||||||| ||||||||  |||||||||||||||||    
T  2999283 ttgaacaaccatttaattgacaacttttaggacaaccataatttacaaagaaaa 2999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 6239468 - 6239423
Alignment:
Q  233 aatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| ||||||||| | |||| ||||||||||||||||    
T  6239468 aatagagagaaaataaaaacatgatgtgaatatgagagagaaagtt 6239423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 32130183 - 32130236
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaa 249  Q
    |||||||||||||| | | || |||||||||||||| |||||||||||| ||||    
T  32130183 tacaaagaaaatgatgtattgatacaaaaattaaagaaatagagagaaagtaaa 32130236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 35897871 - 35897786
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga 238  Q
    ||||||||||||||  || | ||||| | |||||| |||| ||||||| |||||||||| | ||  |||||||| |||||||||||    
T  35897871 ttgaacaaccatttatatgataacttttgggacaactatattttacaatgaaaatgaagtattgacacaaaaatcaaagcaataga 35897786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 41849786 - 41849734
Alignment:
Q  228 aaagcaatagag--agaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||  ||||| ||||||||||| |||||||||| ||||||||||    
T  41849786 aaagcaatagaggaagaaagtaaaaacataatgtgagtatgaaagagaaagtt 41849734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 54000826 - 54000742
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| | | | ||||| ||| ||||| ||||||||||||||  || |||||  |||| |||||||||||||||||||||    
T  54000826 tacaaagaaatttaggtagtggcacacaaatttaagcaatagagagagaaagtaaaatgataatgtgagtatgagagagaaagtt 54000742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 5466483 - 5466523
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  5466483 agagaaaataaaaacataatgtgaatatgagagagaaagtt 5466523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 7632403 - 7632486
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||| |||||||   | ||| |||||||| ||||||||  ||||||||| |||||| |||| |||||||||| |||||||    
T  7632403 tttacaaataaaatgagtgattggcacaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaa 7632486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 12241133 - 12241101
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  12241133 taaaaacataatgtgagtatgagagagaaagtt 12241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 26724914 - 26724997
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||  ||| |||||||||||| | ||||| |||||||||||| |||||| ||||||    
T  26724914 tttacaaaggaaatgaggtagtgacacaaaaaccaaaacaatagagagaagt-aaaaagataacgtgagtaagagagaaaaagtt 26724997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 33820332 - 33820364
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  33820332 taaaaacataatgtgagtatgagagagaaagtt 33820364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 37731990 - 37731958
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  37731990 taaaaacataatgtgagtatgagagagaaagtt 37731958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 40409162 - 40409194
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  40409162 taaaaacataatgtgagtatgagagagaaagtt 40409194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 46686308 - 46686276
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  46686308 taaaaacataatgtgagtatgagagagaaagtt 46686276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 49449105 - 49449189
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | | | | |||||||  ||| |||||||| |||||| |||| |||| ||| |||||||| ||||||||    
T  49449105 tttacaaagaaaatgaggtattagcacaaaaaccaaaacaatagagtgaaatttaaaagataatgtgcgtatgagatagaaagtt 49449189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 49768865 - 49768897
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  49768865 taaaaacataatgtgagtatgagagagaaagtt 49768897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 50980678 - 50980638
Alignment:
Q  234 atagagagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    ||||||||||| |||||| |||| |||||||||||||||||    
T  50980678 atagagagaaagtaaaaatataatgtgagtatgagagagaa 50980638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 51577725 - 51577658
Alignment:
Q  213 agtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| |||||||| |||||||||||||||  || |||||  ||||  ||||||||||||||||||||    
T  51577725 agtggcacaaaaatcaaagcaatagagagagaaagtaaaatgataatatgagtatgagagagaaagtt 51577658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 16729 - 16815
Alignment:
Q  193 atttacaaagaaaatgaagcagtggtacaaaaattaaagcaat-agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||| | | ||||||||||| ||||||||| ||||||||| || ||| |||| |||||||||||||||||||||    
T  16729 atttacaaagaaaatgaggtattggtacaaaaactaaagcaataagagagaaagtataaagataatgtgagtatgagagagaaagtt 16815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 56115 - 56029
Alignment:
Q  193 atttacaaagaaaatgaagcagtggtacaaaaattaaagcaat-agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||| | | ||||||||||| ||||||||| ||||||||| || ||| |||| |||||||||||||||||||||    
T  56115 atttacaaagaaaatgaggtattggtacaaaaactaaagcaataagagagaaagtataaagataatgtgagtatgagagagaaagtt 56029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 42768333 - 42768249
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| ||||||  |||||||  ||||||||||||||||| |||||| |||| |||||||||||||| ||||||    
T  42768333 tttacaaaggaaatgaggcagtgacacaaaaaccaaagcaatagagagaaagtaaaaaaataatgtgagtatgagagaaaaagtt 42768249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 10902834 - 10902748
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | | ||| |||||||| |||||||||||||||  || ||||||||||| |||||| ||||||||||||||    
T  10902834 tttacaaagaaaatgatgtattggcacaaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtgtgagagagaaagtt 10902748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 27854710 - 27854790
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    |||||||||||||| ||  | ||| |||||||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||    
T  27854710 tttacaaagaaaattaaatattggcacaaaaatcaaaacaatagagagaaagtaaaaacataatgtgagtatgagaaagaa 27854790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 31249466 - 31249545
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagaga 271  Q
    ||||||||| |||||| | |||||||||||||  ||||||||  ||||||||| |||||| |||| ||||||||||||||    
T  31249466 tttacaaaggaaatgaggtagtggtacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagaga 31249545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 26000639 - 26000581
Alignment:
Q  222 aaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| |||||||||||||||  || |||||||||||||||||||||||||| ||||||    
T  26000639 aaaatcaaagcaatagagagataaaataaaaacataacgtgagtatgagagataaagtt 26000581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 27325887 - 27325801
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  |||||||||||||||  || |||||| || | |||||||||||||||||||||    
T  27325887 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagatcatgtgagtatgagagagaaagtt 27325801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 33100437 - 33100496
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||| |||||||||||| ||||||  ||| |||||||||||||||||||||    
T  33100437 acaaaaatcaaagtaatagagagaaaataaaaatgtaatgtgagtatgagagagaaagtt 33100496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 43397910 - 43397824
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||   ||||| |||||||  |||| ||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  43397910 tttacaaagaaaatgagatagtggcacaaaaaccaaagtaatagaaagagaaagtaaaaaaataatgtgagtatgagagagaaagtt 43397824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 22719569 - 22719486
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||||||||||| | ||| | |||||||  |||||||||||  |||||| |||||| |||| ||||| ||||||||||||    
T  22719569 tttacaaagaaaatgaggtagttgcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagcatgagagagaaa 22719486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 26027007 - 26026940
Alignment:
Q  213 agtggtacaaaaattaaagcaatag--agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||| ||||||||||||||||||||  ||||||| |||||  |||| |||||||||||| ||||||||    
T  26027007 agtgatacaaaaattaaagcaatagaaagagaaaataaaatgataatgtgagtatgagaaagaaagtt 26026940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 34718221 - 34718159
Alignment:
Q  217 gtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  34718221 gtacaaaaatcaaagcaatagagagataaagtaaaaa-ataatgtgagtatgagagagaaagtt 34718159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 5277441 - 5277527
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  ||||||| | ||||||||||||||  || |||||| |||| |||||||||||||| ||||||    
T  5277441 tttacaaaggaaatgaggtagtgacacaaaaacttaagcaatagagagagaaagtaaaaagataatgtgagtatgagagataaagtt 5277527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 6511828 - 6511887
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| ||||  |||||||||||| |||||||||||  | ||||||||||||||||||    
T  6511828 acaaaaactaaaataatagagagaaaataaaaacataatataagtatgagagagaaagtt 6511887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 10839424 - 10839506
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    |||||||||||||| ||  | ||| |||||||  |||||||||||  |||||| ||||||||||| || ||||||||||||||    
T  10839424 tttacaaagaaaattaaatattggcacaaaaaccaaagcaatagatagagaaagtaaaaacataatgtaagtatgagagagaa 10839506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 11253484 - 11253570
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | | ||  |||||||  |||||||||||||||  || |||||| |||| || ||||||||||||||||||    
T  11253484 tttacaaagaaaatgaggtattgacacaaaaaccaaagcaatagagagagaaaataaaaagataatgtaagtatgagagagaaagtt 11253570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 13971021 - 13970963
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||||||||||||| | |||| ||||  ||||||||||||||||||||    
T  13971021 acaaaaatcaaagcaatagagagaaaat-aaaatataatatgagtatgagagagaaagtt 13970963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 275
Target Start/End: Original strand, 21526266 - 21526305
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  21526266 agagagaaagtaaaaacataatgtgagtatgagagagaaa 21526305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 33605055 - 33605102
Alignment:
Q  228 aaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||||||||| | |||||||| || ||||||||||||||||||    
T  33605055 aaagcaatagagagagagtaaaaacacaatgtgagtatgagagagaaa 33605102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 37449367 - 37449453
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagaga--gaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||| | |||||||  |||||||||||||  |||| |||||| |||| |||||||||||||| ||||||    
T  37449367 tttacaaaggaaatgaggtagtagcacaaaaaccaaagcaatagagacagaaagtaaaaagataatgtgagtatgagagaaaaagtt 37449453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 5740771 - 5740813
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||    
T  5740771 agagagaaagtaaaaacataatgtgagtatgagagaaaaagtt 5740813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 6440167 - 6440125
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  6440167 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 6440125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 7325800 - 7325758
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  7325800 agagagagaataaaaacataatgtgagtatgagagagaaagtt 7325758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 7598791 - 7598753
Alignment:
Q  239 gagaaattaaaaacataacgtgagtatgagagagaaagt 277  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  7598791 gagaaagtaaaaacataatgtgagtatgagagagaaagt 7598753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 11114655 - 11114697
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||    
T  11114655 agagagaaaataaaaacataatgtgaatatgagagagaaagtt 11114697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 12490758 - 12490800
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  12490758 agagagagaataaaaacataatgtgagtatgagagagaaagtt 12490800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 24946087 - 24946045
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  24946087 agagagagaataaaaacataatgtgagtatgagagagaaagtt 24946045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 25830231 - 25830273
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  25830231 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 25830273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 29028928 - 29028988
Alignment:
Q  219 acaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||||||||||  |||||||||| |||| |||||||| ||||||||||||    
T  29028928 acaaaaatcaaagcaatagagagataaattaaaaa-ataatgtgagtataagagagaaagtt 29028988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 32020451 - 32020493
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  32020451 agagagaaagtaaaaacataatgcgagtatgagagagaaagtt 32020493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 32133417 - 32133371
Alignment:
Q  232 caatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||| ||||||||||| |||| || |||||||||||||    
T  32133417 caatagagagaaagtaaaaacataatgtgaataagagagagaaagtt 32133371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 34694881 - 34694847
Alignment:
Q  222 aaaattaaagcaatagagagaaattaaaaacataa 256  Q
    ||||| |||||||||||||||||||||||||||||    
T  34694881 aaaatcaaagcaatagagagaaattaaaaacataa 34694847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 35067265 - 35067204
Alignment:
Q  219 acaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  |||||||||||  |||||| |||||| |||| |||||||||||||||||||||    
T  35067265 acaaaaaccaaagcaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagtt 35067204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 35701809 - 35701851
Alignment:
Q  232 caatagagagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||    
T  35701809 caatagagagaaaataaaaagatatcgtgagtatgagagagaa 35701851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 43285948 - 43285990
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  43285948 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 43285990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 43715960 - 43715918
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  43715960 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 43715918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 4658154 - 4658207
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaa 206  Q
    |||||||||||||| | | ||||||| ||||||||  |||||||||||||||||    
T  4658154 ttgaacaaccatttaattgacaacttttaggacaaccataatttacaaagaaaa 4658207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 10184114 - 10184151
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  10184114 agagaaaataaaaacataatgtgagtatgagagagaaa 10184151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 2730921 - 2730988
Alignment:
Q  213 agtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| |||||||| |||||| |  ||||||||| |||||| |||| |||| ||||||||||||||||    
T  2730921 agtggcacaaaaatcaaagcagttgagagagaaagtaaaaagataatgtgaatatgagagagaaagtt 2730988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 5742641 - 5742685
Alignment:
Q  234 atagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| | ||||||||||| |||||||||||||| ||||||    
T  5742641 atagagagagaataaaaacataatgtgagtatgagagataaagtt 5742685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 24798345 - 24798385
Alignment:
Q  238 agagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| |||||| |||| |||||||||||||||||||||    
T  24798345 agagaaagtaaaaatataatgtgagtatgagagagaaagtt 24798385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 32501138 - 32501221
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaat--taaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| |||||| | ||||  |||||||| |||| |||||||||| |   |||||| |||| ||||||||||||||||||    
T  32501138 tttacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagagagagaacgtaaaaaaataatgtgagtatgagagagaaa 32501221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 32674228 - 32674260
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  32674228 taaaaacataatgtgagtatgagagagaaagtt 32674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 38939185 - 38939217
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  38939185 taaaaacataatgtgagtatgagagagaaagtt 38939217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 43632279 - 43632355
Alignment:
Q  193 atttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgaga 269  Q
    ||||||||| ||||||| | | ||  |||||||  |||||||||||||| || ||||||||| | ||||||||||||    
T  43632279 atttacaaataaaatgaggtattgacacaaaaaccaaagcaatagagaggaagtaaaaacatgatgtgagtatgaga 43632355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 6596501 - 6596381
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaac 252  Q
    |||||| ||||||||||| |||| |||| ||| ||  |||||||||||||||||||| | | |   |||||||  ||||||||||||||||| |||||||    
T  6596501 ttgaacgaccatttcaattacaatttatgggataatcataatttacaaagaaaatgaggtattaacacaaaaaccaaagcaatagagagaaagtaaaaac 6596402  T
Q  253 ataacgtgagtatgagagaga 273  Q
    |||| |||||||  |||||||    
T  6596401 ataatgtgagtacaagagaga 6596381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 5168312 - 5168226
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | ||||| |||||||| |||||||||||  |||||| |||||| |||| |||||||||||||| ||||||    
T  5168312 tttacaaagaaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagataaagtt 5168226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 35075540 - 35075603
Alignment:
Q  215 tggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||| ||||||    
T  35075540 tggtacaaaaatcaaagcaatagagagaaaataaaaatataatgtgagtatgagagaaaaagtt 35075603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 20270699 - 20270614
Alignment:
Q  193 atttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||| | | ||  ||| |||| ||| ||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  20270699 atttacaaagaaaatgaggtattgacacataaatcaaaacaataaagagaaattaaaaacataatgtgagtatgagagataaagtt 20270614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 11148611 - 11148559
Alignment:
Q  222 aaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaa 274  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  11148611 aaaatcaaagcaatagagagaaagtaaaaacataatgtgagtatgagagagaa 11148559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 18660888 - 18660805
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| |||||||| | ||| |||||||  |||||||||||||||  || |||||| |||||||||||||||||||||||    
T  18660888 tttacaaaggaaatgaagtattggcacaaaaaccaaagcaatagagagagaaagtaaaaagataacgtgagtatgagagagaaa 18660805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 33037649 - 33037563
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaat--taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||| |||||||||||||||||   |||||| |||| |||||||||||||||||||||    
T  33037649 tttacaaaggaaatgaggtagtgacacaaaaatcaaagcaatagagagaaaaagtaaaaagataatgtgagtatgagagagaaagtt 33037563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 7552913 - 7552993
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| | | ||  |||||||| || ||| |||||||||| ||||||||||| |||||| ||||||||||||||    
T  7552913 caaagaaaatgatgtattgacacaaaaatcaatgcagtagagagaaagtaaaaacataatgtgagtgtgagagagaaagtt 7552993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 19844252 - 19844336
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||| || | | ||| ||| |||  ||||||||||||||||| ||||||||||| |||  ||||||||||||||||    
T  19844252 tttacaaagaaaaagaggtattggcacacaaaccaaagcaatagagagaaagtaaaaacataatgtggatatgagagagaaagtt 19844336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 26686985 - 26686925
Alignment:
Q  218 tacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||| ||||||||||||| |||||| |||| |||| ||||||||||||||||    
T  26686985 tacaaaaatcaaaacaatagagagaaagtaaaaatataatgtgaatatgagagagaaagtt 26686925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 26956716 - 26956656
Alignment:
Q  218 tacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||| ||||||||||||| |||||| |||| |||| ||||||||||||||||    
T  26956716 tacaaaaatcaaaacaatagagagaaagtaaaaatataatgtgaatatgagagagaaagtt 26956656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 33599064 - 33599006
Alignment:
Q  222 aaaattaaagcaatagagagaaat--taaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||||||||   ||||||||||| |||||||||||| ||||||||    
T  33599064 aaaattaaagcaatagagagaaaaagtaaaaacataatgtgagtatgagaaagaaagtt 33599006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 35646512 - 35646426
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaata--gagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  |||||||  |||||||||  |||||||| |||||| |||| |||||||||||||||||||||    
T  35646512 tttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatatagagagaaagtaaaaaaataatgtgagtatgagagagaaagtt 35646426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 275
Target Start/End: Original strand, 21943599 - 21943720
Alignment:
Q  156 aacaaccatttcaataacaacttataggacaaatataatttacaaagaaaatgaagcagtggtacaaaaattaaagcaata--gagagaaattaaaaaca 253  Q
    |||||| |||| ||| |||||||| | |||||  |||||||||||||||||| |   | ||  | |||||| |||||||||  |||||||| ||||||||    
T  21943599 aacaactattttaatgacaacttacatgacaaccataatttacaaagaaaataagatattgacagaaaaatcaaagcaataaagagagaaaataaaaaca 21943698  T
Q  254 taacgtgagtatgagagagaaa 275  Q
    ||| |||| |||||||||||||    
T  21943699 taatgtgaatatgagagagaaa 21943720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 1952497 - 1952445
Alignment:
Q  223 aaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||| ||||||||||||| |||||||||||| | ||||||||| |||||    
T  1952497 aaattaaaacaatagagagaaagtaaaaacataacataagtatgagatagaaa 1952445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 4719776 - 4719701
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaat--taaaaacataacgtgagtatgagaga 271  Q
    |||||||||  ||| | ||| |||||||| |||||||||||||||||   ||||||||||| ||||||||||||||    
T  4719776 caaagaaaagaaagtattggcacaaaaatcaaagcaatagagagaaaaagtaaaaacataatgtgagtatgagaga 4719701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 7076510 - 7076593
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| |||||||| | ||| |||||||  ||||||||  ||||||||| |||||| ||||  |||||||||||||||||    
T  7076510 tttacaaaggaaatgaagtaatggcacaaaaaccaaagcaatagagagagaaagtaaaaaaataatatgagtatgagagagaaa 7076593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 9168133 - 9168189
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||  ||||||||||||||||| |||||| |||| |||||||||| |||||||    
T  9168133 acaaaaaccaaagcaatagagagaaaataaaaatataatgtgagtatgaaagagaaa 9168189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 7287131 - 7287217
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | ||||  |||||||  ||| ||||  ||||||||| |||||| |||| |||||||||| ||||||||||    
T  7287131 tttacaaagaaaatgaggtagtgacacaaaaaccaaaacaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagtt 7287217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 22649628 - 22649686
Alignment:
Q  219 acaaaaattaaagcaata--gagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||| ||||||||||  |||||||| |||||| |||| ||||||||||||||||||    
T  22649628 acaaaaactaaagcaatatggagagaaagtaaaaagataatgtgagtatgagagagaaa 22649686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 26791186 - 26791272
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||   ||||| |||||||  |||||||||||||||  || |||||| |||| ||||| |||||||||||||||    
T  26791186 tttacaaaggaaatgagttagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagcatgagagagaaagtt 26791272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 28306074 - 28306160
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||| | ||||| ||||| |  ||||||||  ||||||||| ||| || |||| |||||||||||||| ||||||    
T  28306074 tttacaaagaaaatgaggtagtggcacaaagaccaaagcaatagagagagaaagtaagaagataatgtgagtatgagagataaagtt 28306160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 35649957 - 35650015
Alignment:
Q  222 aaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||||||||  || ||||||||||| |||||||||||||| ||||||    
T  35649957 aaaattaatgcaatagagagagaaagtaaaaacataatgtgagtatgagagaaaaagtt 35650015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 36739077 - 36738991
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||  |||||| | ||||  |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  36739077 tttacaaaagaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 36738991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 13309968 - 13309926
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||    
T  13309968 agagagaaagtaaaaacataatgtgaatatgagagagaaagtt 13309926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 17990299 - 17990257
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  17990299 agagagagaataaaaacataatgtgagtatgagagagaaagtt 17990257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 19521970 - 19522031
Alignment:
Q  219 acaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| ||||||||  ||||||||| |||||| |||| |||||||||| ||||||||||    
T  19521970 acaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtatgaaagagaaagtt 19522031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 20591460 - 20591502
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||| ||||| || ||||||||||||||||||||||||||    
T  20591460 agagagagattaagaatataacgtgagtatgagagagaaagtt 20591502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 22098341 - 22098299
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  22098341 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 22098299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 37172740 - 37172782
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||||||| || |||||||||||| ||||||||    
T  37172740 agagagaaattaaaaacacaatgtgagtatgagaaagaaagtt 37172782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 39054691 - 39054630
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||||||||||||  || ||||||||||| |||||| ||| ||||||||||    
T  39054691 acaaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtgtgaaagagaaagtt 39054630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 14532600 - 14532548
Alignment:
Q  228 aaagcaatagaga--gaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||  |||| |||||||| || |||||||||||||||||||||    
T  14532600 aaagcaatagagaaagaaagtaaaaacaaaatgtgagtatgagagagaaagtt 14532548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 21210946 - 21210862
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| | | | ||| ||||||||||||||||||||||  |||||| || ||  |||| ||| |||||||||||||||||    
T  21210946 tacaaagaaatttaggtagtagtacaaaaattaaagcaatagagagagaaagtagaagaataatgtgtgtatgagagagaaagtt 21210862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 22653743 - 22653698
Alignment:
Q  233 aatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| ||| || |||| |||||||||||||||||||||    
T  22653743 aatagagagaaaataagaagataatgtgagtatgagagagaaagtt 22653698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 29463100 - 29463044
Alignment:
Q  219 acaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagaga 273  Q
    |||||||| |||||||||||||||  || |||||||| || ||||||||||||||||    
T  29463100 acaaaaatcaaagcaatagagagagaaaataaaaacaaaatgtgagtatgagagaga 29463044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 38704097 - 38704150
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaaa 206  Q
    |||||||||||||| | ||||||||| | ||||||  |||||||||||||||||    
T  38704097 ttgaacaaccatttgattaacaacttttgggacaaccataatttacaaagaaaa 38704150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 10469943 - 10469975
Alignment:
Q  246 taaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||| |||||||||||||||||||||    
T  10469943 taaaaacataatgtgagtatgagagagaaagtt 10469975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 27488016 - 27487933
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaa 275  Q
    |||||||||||||| ||  | ||| |||||||  |||||||||||||||  || |||| ||||||||||||||| | |||||||    
T  27488016 tttacaaagaaaattaaatattggcacaaaaaccaaagcaatagagagagaaagtaaatacataacgtgagtataaaagagaaa 27487933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 38493727 - 38493668
Alignment:
Q  221 aaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||| |||||||||||||||  || |||||  |||| |||||||||||||||||||||    
T  38493727 aaaaatcaaagcaatagagagataaagtaaaattataatgtgagtatgagagagaaagtt 38493668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 20998045 - 20998135
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataa-tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga 242  Q
    |||||||||||||| ||||||||| ||| |||||| ||||| |||||||||||||||| | | || ||||||||  |||||||||||||||    
T  20998045 ttgaacaaccattttaataacaacgtatgggacaactataaatttacaaagaaaatgaggtattgatacaaaaaccaaagcaatagagaga 20998135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 2241969 - 2242049
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||||| ||| ||  |||||||  ||||||||||||| ||  ||||||| ||| |||||||||||||||||||||    
T  2241969 tacaaagaaaatgaggcattgacacaaaaaccaaagcaatagagaaaa--taaaaacttaatgtgagtatgagagagaaagtt 2242049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 5080509 - 5080595
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||  ||||||| |||||||||  ||||||||| |||||| |||| |||||||||| ||||||||||    
T  5080509 tttacaaaggaaatgaggtagtgacacaaaaactaaagcaatagagagagaaagtaaaaaaataatgtgagtatgaaagagaaagtt 5080595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 22079509 - 22079591
Alignment:
Q  198 caaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||||| | | ||  |||||||| |||||||||||||||  || ||||||||||| |||||| ||||||||||||||    
T  22079509 caaagaaaatgatgtattgacacaaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtgtgagagagaaagtt 22079591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30634838 - 30634880
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  30634838 agagagaaagtaaaaacataacatgagtatgagagagaaagtt 30634880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 17551318 - 17551406
Alignment:
Q  192 aatttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||| ||||||||||| | | ||  |||||||  ||| |||||||||||  || ||||||||||| |||||||||||||||||||||    
T  17551318 aatttataaagaaaatgagggattgacacaaaaaccaaaacaatagagagataaagtaaaaacataatgtgagtatgagagagaaagtt 17551406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 11612317 - 11612238
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagag--agaaattaaaaacataacgtgagtatgagaga 271  Q
    |||||||||||||||| | | | | |||||||||||||||||||||  ||||| |||||| |||| |||||||| |||||    
T  11612317 tttacaaagaaaatgaggtatttgcacaaaaattaaagcaatagagaaagaaagtaaaaagataatgtgagtataagaga 11612238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 25811799 - 25811866
Alignment:
Q  213 agtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| |||||||  |||||||||||||||  || |||||| |||| |||||||||||||||||||||    
T  25811799 agtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagtt 25811866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 26595478 - 26595399
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagaga 271  Q
    |||||||||||||||| | | ||  |||||||  |||||||||||||||  || ||||||||||| ||||||||||||||    
T  26595478 tttacaaagaaaatgaggtattgacacaaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatgagaga 26595399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 552922 - 552836
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaataga--gagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  |||||||||||  |||||| |||||| |||| |||| ||||||||| ||||||    
T  552922 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgaatatgagagacaaagtt 552836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 2060602 - 2060661
Alignment:
Q  219 acaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||  ||||||||||||||||  |||||| |||| |||||||||||||| ||||||    
T  2060602 acaaaaaccaaagcaatagagagaaggtaaaaatataatgtgagtatgagagaaaaagtt 2060661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 3853249 - 3853335
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||||||||||   | ||  |||||||| |||||||||||||||  || | ||||||||| |||| ||||||||||||||||    
T  3853249 tttacaaagaaaatgagatattgacacaaaaatcaaagcaatagagagagaaagttaaaacataaggtgattatgagagagaaagtt 3853335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 15974737 - 15974651
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagaga--aattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||||| |||   |||||||  |||||||||||||||  || |||||| |||| |||| ||||||||||||||||    
T  15974737 tttacaaaggaaatgaagtagtaacacaaaaaccaaagcaatagagagagaaaataaaaagataatgtgaatatgagagagaaagtt 15974651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 4820496 - 4820446
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagagaaa 244  Q
    |||||||||||||||| ||| ||  |||||||| |||||||||||||||||    
T  4820496 tttacaaagaaaatgaggcattgacacaaaaatcaaagcaatagagagaaa 4820446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 13423054 - 13423012
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  13423054 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 13423012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 23653879 - 23653921
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| |||| |||||||||||||||||||||    
T  23653879 agagagaaagtaaaaatataatgtgagtatgagagagaaagtt 23653921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 25127818 - 25127860
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||    
T  25127818 agagagaaagtaaaaacataatgtgagtatcagagagaaagtt 25127860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 8505717 - 8505801
Alignment:
Q  196 tacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||||| | | | ||| |||||||||| ||||||||||||||  ||| |||||  |||| |||| ||||||||||||||||    
T  8505717 tacaaagaaatttaggtagttgtacaaaaatcaaagcaatagagagaaaaagtaaaaggataatgtgaatatgagagagaaagtt 8505801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 16337909 - 16337950
Alignment:
Q  237 gagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    |||||||| |||||| |||| |||||||||||||||||||||    
T  16337909 gagagaaagtaaaaatataatgtgagtatgagagagaaagtt 16337950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 32316870 - 32316954
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaatagagag--aaattaaaaacataacgtgagtatgagagagaaag 276  Q
    |||||||||||||||| | | ||  |||||||  ||||||||||||||  ||| |||||| |||| |||||||||| ||||||||    
T  32316870 tttacaaagaaaatgaggtactgacacaaaaaccaaagcaatagagagataaagtaaaaagataatgtgagtatgaaagagaaag 32316954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 3712605 - 3712645
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaag 276  Q
    ||||||||||||| || |||| |||||||||||||||||||    
T  3712605 agagagaaattaagaatataatgtgagtatgagagagaaag 3712645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 3832634 - 3832582
Alignment:
Q  153 ttgaacaaccatttcaataacaacttataggacaaatataatttacaaagaaa 205  Q
    |||||||||||||| | | ||||||||| ||||||  ||||||||||||||||    
T  3832634 ttgaacaaccatttgattgacaacttatgggacaaccataatttacaaagaaa 3832582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 11045 - 10980
Alignment:
Q  213 agtggtacaaaaattaaagcaatagagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| |||||||| ||||||||||||||| | |||||  |||| |||||||||||||||||||||    
T  11045 agtggcacaaaaatcaaagcaatagagagagagtaaaatgataatgtgagtatgagagagaaagtt 10980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 995 - 956
Alignment:
Q  236 agagagaaattaaaaacataacgtgagtatgagagagaaa 275  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  995 agagagaaaataaaaacataatgtgagtatgagagagaaa 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 76561 - 76647
Alignment:
Q  194 tttacaaagaaaatgaagcagtggtacaaaaattaaagcaat--agagagaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||||||| |||||| | ||||| |||||||  ||||||||  ||||||||| | |||| |||| ||| |||||||||||||||||    
T  76561 tttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtgaaaagataatgtgggtatgagagagaaagtt 76647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 34783 - 34821
Alignment:
Q  240 agaaattaaaaacataacgtgagtatgagagagaaagtt 278  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  34783 agaaagtaaaaacataatgtgagtatgagagagaaagtt 34821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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