View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5958_high_15 (Length: 271)
Name: NF5958_high_15
Description: NF5958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5958_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 39 - 255
Target Start/End: Complemental strand, 52013374 - 52013158
Alignment:
| Q |
39 |
ataaaataaaaaatcatagaaaggtgattagtccttacttacgtgatgaccttcagcctcatcatcatcaaggagtgaaatttcaaacaacaaatcccaa |
138 |
Q |
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| T |
52013374 |
ataaaataaaaaatcaaagaaaggtgattagtccttacttacgtgatgaccttcagcttcatcatcatcaaggagtgaaatttcatacaacaaatcccaa |
52013275 |
T |
|
| Q |
139 |
tcatgagtcataaccaaaacctgaccaaaaccagtaactacagcaataacttcaccatcaggactaagcgaaatgcaattaacaccaccatcaacattcc |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52013274 |
tcatgagtcataaccaaaacctgaccaaaaccagtaactacagcaataacttcaccatcaggactaagcgaaatgcaattaacaccaccatcaacattcc |
52013175 |
T |
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| Q |
239 |
caacaacttgagtcaca |
255 |
Q |
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||||||||||||||||| |
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| T |
52013174 |
caacaacttgagtcaca |
52013158 |
T |
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