View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5958_high_6 (Length: 409)
Name: NF5958_high_6
Description: NF5958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5958_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 192 - 390
Target Start/End: Complemental strand, 2893835 - 2893637
Alignment:
| Q |
192 |
taatataataccaaaaattaaattttttaccttctccatatcaacatcttcatcctcaacaccacgcaaatcctcagcaatgaccttctgatgaatcctg |
291 |
Q |
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| T |
2893835 |
taatataataccaaaaattaaattttttaccttctccatatcaacatcttcatcctcaacaccacgcaaatcctcagcaatgaccttctgatgaatcctg |
2893736 |
T |
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| Q |
292 |
acaagcgcatccatagcaggacacataaactcaccagaatcttcaaaatcatttgattcatcagaaacactataaaccgtaacaacacgctcatcacaa |
390 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2893735 |
acaagcgcatccatagcaggacacataaactcaccagaatcttcaaaatcatttgattcatcagaaacactataaaccgtaacaacacgctcatcacaa |
2893637 |
T |
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