View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5958_low_11 (Length: 318)
Name: NF5958_low_11
Description: NF5958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5958_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 308
Target Start/End: Complemental strand, 34364931 - 34364646
Alignment:
| Q |
19 |
cagtacaaaacttcagagacaaattcaaatccaaacttcatatagtagattgtctacaaagagttaattcatctttcactgatgaagaatttaacattaa |
118 |
Q |
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| T |
34364931 |
cagtacaaaacttcagagacaaattcaaatccaaacttcatatagtagattgtctacaaagagttaattcacctttcactgatgaagaatttaacattaa |
34364832 |
T |
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| Q |
119 |
ttcttttatcagcatctcaaatgcaaatggtccacttaacacaagagaagattacgttaaatggatgctagtgacacaaaatcaagcataacatacagta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
34364831 |
ttcttttatcagcatctcaaatgcaaatggtccacttaacacaagagaagattacgttaaatggatgctagtgacacaaaatcaagcataacat----ta |
34364736 |
T |
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| Q |
219 |
caaagacacaacttaaatagtaagtaatcatctgtgtgacaatatcttttttcccttcagctgaactaaaacagtatttcaatagtataa |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34364735 |
caaagacacaacttaaatagtaagtaatcatctgtgtgacaatatgttttttcccttcagctgaactaaaacagtatttcaatagtataa |
34364646 |
T |
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