View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5961_low_27 (Length: 281)
Name: NF5961_low_27
Description: NF5961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5961_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 47036104 - 47036377
Alignment:
| Q |
1 |
aattctccaaacattggaccaaaagctattagcctccatgttattaaacctgcaaagggacttgtaacttgtaagtggtagcgacaatatcccagggtaa |
100 |
Q |
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| T |
47036104 |
aattctccaaacattggaccaaaagctattagcctccatgttattaaacctgcaaagggacttgtaacttgtaagtggtagcgacaatatcccagggtaa |
47036203 |
T |
|
| Q |
101 |
cacacaaatcagctcttaaattgatatcagattgcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaatagagataaat |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036204 |
cacacaaatcagctcctaaattgatatcagattgcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaatagagataaat |
47036303 |
T |
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| Q |
201 |
tccattgctcattactatctattaagtcttctactttcatattactcaaactatttgggacatgtcctttgcta |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036304 |
tccattgctcattactatctattaagtcttctactttcatattactcaaactatttgggacatgtcctttgcta |
47036377 |
T |
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