View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5961_low_45 (Length: 251)
Name: NF5961_low_45
Description: NF5961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5961_low_45 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 45258136 - 45258373
Alignment:
| Q |
12 |
aattctcgattatgtcgtagcctcatttagtaactgggtccacaataaagtaactgcaaaaaagtctcagtttcaaattcaatgcaaacccaaaactttt |
111 |
Q |
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| T |
45258136 |
aattctcgattatgtcgtagcctcatttagtaactgggtccacaataaagtaactgcaaaaaagtctcagtttcaaattcaatgcaaacccaaaactttt |
45258235 |
T |
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| Q |
112 |
acaaaattacaaaattgttccgtatttcattcacctcccccaagtcccacaaacagatacgacagaaatatttgatggatgtgttttgattttgatgaaa |
211 |
Q |
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| T |
45258236 |
acaaaattacaaaattgttccgtatttcattcacctcccccaagtcccacaaacagatacgacagaaatatttgatggatgtgttttgattttgatgaaa |
45258335 |
T |
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| Q |
212 |
gagtcgttgaccaacacacaaaacaaaaattaaagataac |
251 |
Q |
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| T |
45258336 |
gagtcgttgaccaacacac--aacaaaaattaaagataac |
45258373 |
T |
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