View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5961_low_59 (Length: 224)
Name: NF5961_low_59
Description: NF5961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5961_low_59 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 17146243 - 17146448
Alignment:
| Q |
1 |
gcctttagcaattgtgatttcttcacctggaaacattctatactcactttcagcttcataatctaaacactccaaatcaccagctgaagtataagtcctc |
100 |
Q |
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| T |
17146243 |
gcctttagcaattgtgatttcttcacctggaaacattctatactcactttcagcttcataatctaaacactccaaatcaccagctgaagtataagtcctc |
17146342 |
T |
|
| Q |
101 |
tcagtattctcatacattgcaaaaactgcttcttcaagcaatttcttgttccaatctccataaccttttacctcttcttcttcgtctttcactgattcga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
17146343 |
tcagtattctcatacattgcaaaaactgcttcttcaagcaatttcttgttccaatctccataaccttttacctcttcttcttcgtctttcaatgattcga |
17146442 |
T |
|
| Q |
201 |
agtaag |
206 |
Q |
| |
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|||||| |
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| T |
17146443 |
agtaag |
17146448 |
T |
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