View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5961_low_7 (Length: 451)

Name: NF5961_low_7
Description: NF5961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5961_low_7
NF5961_low_7
[»] chr3 (60 HSPs)
chr3 (16-174)||(1281084-1281242)
chr3 (312-434)||(1280935-1281057)
chr3 (174-302)||(44785401-44785529)
chr3 (174-300)||(19557057-19557183)
chr3 (174-300)||(49823386-49823512)
chr3 (174-299)||(10297979-10298104)
chr3 (176-301)||(22721929-22722054)
chr3 (174-301)||(4238592-4238719)
chr3 (176-303)||(8817393-8817520)
chr3 (174-301)||(34080035-34080162)
chr3 (174-299)||(17653712-17653837)
chr3 (174-299)||(37508921-37509046)
chr3 (174-299)||(48340397-48340522)
chr3 (174-302)||(9111499-9111627)
chr3 (174-301)||(2787837-2787964)
chr3 (174-301)||(8437423-8437550)
chr3 (174-301)||(21295331-21295458)
chr3 (174-301)||(38964390-38964517)
chr3 (174-301)||(40691001-40691128)
chr3 (174-301)||(42507360-42507487)
chr3 (174-299)||(51406673-51406798)
chr3 (185-301)||(42170362-42170478)
chr3 (174-300)||(46208029-46208155)
chr3 (174-294)||(6013341-6013461)
chr3 (185-300)||(36095696-36095811)
chr3 (185-285)||(33942948-33943048)
chr3 (185-285)||(35513487-35513587)
chr3 (185-303)||(26019496-26019613)
chr3 (185-303)||(9213512-9213630)
chr3 (174-304)||(17653717-17653847)
chr3 (199-284)||(29285790-29285873)
chr3 (245-293)||(33128212-33128260)
chr3 (174-285)||(34988089-34988200)
chr3 (214-285)||(43323074-43323145)
chr3 (174-300)||(4238599-4238725)
chr3 (203-285)||(8092602-8092684)
chr3 (203-285)||(31757457-31757539)
chr3 (174-300)||(37508926-37509052)
chr3 (243-305)||(40690990-40691052)
chr3 (185-285)||(5323220-5323321)
chr3 (243-300)||(46208104-46208161)
chr3 (174-302)||(10297984-10298112)
chr3 (243-299)||(21295326-21295382)
chr3 (174-224)||(9027147-9027197)
chr3 (246-284)||(26001141-26001179)
chr3 (174-304)||(44785391-44785521)
chr3 (243-301)||(45652067-45652125)
chr3 (174-300)||(49823380-49823506)
chr3 (200-285)||(1262234-1262319)
chr3 (174-299)||(9213521-9213646)
chr3 (188-225)||(14848276-14848313)
chr3 (174-299)||(19557052-19557177)
chr3 (174-307)||(22721936-22722069)
chr3 (174-299)||(34080030-34080155)
chr3 (199-284)||(48729569-48729654)
chr3 (199-299)||(2131702-2131802)
chr3 (243-299)||(6013336-6013392)
chr3 (243-299)||(38964466-38964522)
chr3 (241-285)||(42170360-42170404)
chr3 (243-299)||(48340471-48340527)
[»] chr8 (53 HSPs)
chr8 (42-174)||(1674196-1674328)
chr8 (174-299)||(15888357-15888482)
chr8 (174-301)||(54617-54744)
chr8 (174-301)||(2890167-2890294)
chr8 (174-301)||(7785783-7785910)
chr8 (174-299)||(6552655-6552780)
chr8 (174-301)||(7805704-7805831)
chr8 (174-300)||(43199359-43199485)
chr8 (174-299)||(3304283-3304408)
chr8 (174-299)||(39571208-39571333)
chr8 (174-299)||(44498192-44498317)
chr8 (175-299)||(12343146-12343270)
chr8 (185-300)||(13578856-13578971)
chr8 (174-301)||(33289266-33289393)
chr8 (174-300)||(12763659-12763785)
chr8 (174-300)||(25601005-25601131)
chr8 (174-300)||(32211368-32211494)
chr8 (174-299)||(31654613-31654738)
chr8 (174-299)||(32114480-32114605)
chr8 (174-299)||(7012171-7012296)
chr8 (185-299)||(8587170-8587284)
chr8 (240-303)||(4245652-4245715)
chr8 (176-285)||(24691986-24692094)
chr8 (185-285)||(17006925-17007025)
chr8 (185-285)||(17570222-17570322)
chr8 (194-296)||(28463614-28463716)
chr8 (52-144)||(20863883-20863975)
chr8 (174-303)||(15888348-15888477)
chr8 (79-144)||(16686334-16686399)
chr8 (185-301)||(33057592-33057708)
chr8 (185-250)||(27422239-27422304)
chr8 (241-285)||(27422262-27422306)
chr8 (184-236)||(35564705-35564757)
chr8 (243-300)||(25600999-25601056)
chr8 (174-223)||(28463616-28463665)
chr8 (181-285)||(24202985-24203089)
chr8 (204-284)||(28999083-28999163)
chr8 (174-301)||(7785776-7785903)
chr8 (185-264)||(13246810-13246889)
chr8 (186-225)||(15688047-15688086)
chr8 (243-302)||(39571200-39571259)
chr8 (174-285)||(40355179-40355290)
chr8 (174-300)||(54611-54737)
chr8 (174-300)||(2890161-2890287)
chr8 (174-300)||(43199353-43199479)
chr8 (174-299)||(6552660-6552785)
chr8 (174-223)||(8587175-8587224)
chr8 (243-303)||(7012245-7012305)
chr8 (243-303)||(12763650-12763710)
chr8 (245-285)||(13246808-13246848)
chr8 (185-225)||(17006927-17006967)
chr8 (185-225)||(17570280-17570320)
chr8 (243-299)||(33289261-33289317)
[»] chr4 (51 HSPs)
chr4 (174-305)||(7579304-7579435)
chr4 (174-301)||(47833609-47833736)
chr4 (174-301)||(3372119-3372246)
chr4 (174-301)||(48336261-48336388)
chr4 (174-299)||(6121898-6122023)
chr4 (174-299)||(20538691-20538816)
chr4 (174-299)||(46797725-46797850)
chr4 (174-299)||(53337370-53337495)
chr4 (185-301)||(3992974-3993090)
chr4 (174-301)||(42797730-42797857)
chr4 (185-299)||(24704370-24704484)
chr4 (174-303)||(43900545-43900674)
chr4 (174-306)||(51894587-51894719)
chr4 (174-285)||(33621810-33621921)
chr4 (174-300)||(3904688-3904814)
chr4 (174-300)||(47838622-47838748)
chr4 (175-299)||(5986876-5987000)
chr4 (185-299)||(52756675-52756789)
chr4 (188-300)||(33551200-33551312)
chr4 (174-302)||(41469771-41469899)
chr4 (174-285)||(3422075-3422185)
chr4 (174-300)||(40913194-40913320)
chr4 (188-300)||(26231576-26231688)
chr4 (176-285)||(41615683-41615792)
chr4 (185-284)||(50430434-50430533)
chr4 (185-285)||(17344227-17344327)
chr4 (200-285)||(25855097-25855182)
chr4 (203-284)||(31013036-31013117)
chr4 (205-300)||(29845644-29845739)
chr4 (174-284)||(4780311-4780420)
chr4 (242-299)||(4780368-4780425)
chr4 (185-284)||(1716316-1716413)
chr4 (199-290)||(9876648-9876739)
chr4 (185-284)||(43095237-43095336)
chr4 (185-251)||(45478140-45478206)
chr4 (175-223)||(17236864-17236912)
chr4 (188-280)||(41594673-41594765)
chr4 (243-299)||(42797806-42797862)
chr4 (174-285)||(24704375-24704486)
chr4 (201-299)||(44900080-44900178)
chr4 (243-301)||(3422134-3422192)
chr4 (185-299)||(23226019-23226133)
chr4 (243-301)||(41469764-41469822)
chr4 (243-301)||(47838615-47838673)
chr4 (241-299)||(51894582-51894640)
chr4 (174-299)||(7579315-7579440)
chr4 (175-280)||(41594660-41594765)
chr4 (174-215)||(46797730-46797771)
chr4 (174-299)||(47833616-47833741)
chr4 (243-299)||(6121893-6121949)
chr4 (245-285)||(32822285-32822325)
[»] chr6 (67 HSPs)
chr6 (174-300)||(8099529-8099655)
chr6 (174-301)||(8382974-8383101)
chr6 (174-300)||(2830334-2830460)
chr6 (174-300)||(11572150-11572276)
chr6 (174-299)||(6330115-6330240)
chr6 (174-299)||(26602323-26602448)
chr6 (176-300)||(6143553-6143677)
chr6 (174-301)||(13853598-13853725)
chr6 (176-301)||(33052801-33052926)
chr6 (174-301)||(6068564-6068691)
chr6 (185-284)||(8417809-8417908)
chr6 (174-300)||(35031006-35031132)
chr6 (174-299)||(9644696-9644821)
chr6 (174-299)||(9650713-9650838)
chr6 (185-283)||(28747150-28747248)
chr6 (14-146)||(4617020-4617152)
chr6 (207-299)||(13043758-13043850)
chr6 (20-149)||(4480688-4480817)
chr6 (185-269)||(17992018-17992102)
chr6 (14-149)||(4516316-4516451)
chr6 (14-150)||(4601783-4601919)
chr6 (20-149)||(4504405-4504534)
chr6 (13-144)||(4560506-4560637)
chr6 (20-149)||(3171736-3171865)
chr6 (53-144)||(4570972-4571063)
chr6 (79-149)||(4505852-4505922)
chr6 (185-299)||(22896471-22896576)
chr6 (63-144)||(4557125-4557206)
chr6 (85-149)||(4492950-4493014)
chr6 (20-144)||(4592231-4592355)
chr6 (22-149)||(4625946-4626073)
chr6 (22-144)||(4585636-4585758)
chr6 (67-148)||(4299795-4299876)
chr6 (20-144)||(4613726-4613850)
chr6 (22-149)||(4461118-4461245)
chr6 (185-280)||(6549902-6549996)
chr6 (185-284)||(7596993-7597092)
chr6 (66-144)||(4563711-4563789)
chr6 (14-144)||(4574308-4574438)
chr6 (203-285)||(6068974-6069056)
chr6 (79-144)||(4606958-4607023)
chr6 (52-144)||(4579432-4579524)
chr6 (70-141)||(4267224-4267295)
chr6 (14-141)||(4622145-4622272)
chr6 (20-138)||(4490363-4490481)
chr6 (93-147)||(4515202-4515256)
chr6 (14-140)||(4598175-4598301)
chr6 (203-285)||(14936491-14936573)
chr6 (185-285)||(3788050-3788151)
chr6 (174-303)||(8099535-8099664)
chr6 (185-281)||(3421589-3421685)
chr6 (80-146)||(4392094-4392160)
chr6 (20-141)||(4256620-4256741)
chr6 (188-236)||(33393165-33393213)
chr6 (74-125)||(4568072-4568123)
chr6 (243-302)||(9644770-9644829)
chr6 (243-302)||(9650787-9650846)
chr6 (174-301)||(26602328-26602455)
chr6 (174-300)||(6330120-6330246)
chr6 (174-300)||(11572144-11572270)
chr6 (174-299)||(2830340-2830465)
chr6 (14-123)||(4260156-4260265)
chr6 (174-299)||(8382969-8383094)
chr6 (243-300)||(13853592-13853649)
chr6 (243-300)||(28747133-28747190)
chr6 (192-248)||(8026119-8026175)
chr6 (185-225)||(8186441-8186481)
[»] chr7 (35 HSPs)
chr7 (174-299)||(31319404-31319529)
chr7 (178-302)||(1565738-1565862)
chr7 (174-302)||(46840857-46840985)
chr7 (174-301)||(1738452-1738579)
chr7 (174-301)||(7240747-7240874)
chr7 (174-301)||(9268754-9268881)
chr7 (185-300)||(38063929-38064044)
chr7 (174-300)||(7482224-7482350)
chr7 (174-299)||(23314144-23314269)
chr7 (174-301)||(22285697-22285824)
chr7 (174-300)||(28536756-28536882)
chr7 (185-299)||(36583395-36583509)
chr7 (174-299)||(38441460-38441585)
chr7 (185-299)||(94334-94448)
chr7 (185-299)||(36016212-36016326)
chr7 (174-300)||(4790247-4790373)
chr7 (175-283)||(33418392-33418500)
chr7 (185-302)||(9575406-9575523)
chr7 (176-285)||(40840126-40840235)
chr7 (176-284)||(7269412-7269520)
chr7 (85-138)||(3086426-3086479)
chr7 (185-285)||(7661090-7661190)
chr7 (185-285)||(36033242-36033342)
chr7 (203-284)||(14706710-14706792)
chr7 (185-285)||(2853687-2853787)
chr7 (174-301)||(1738445-1738572)
chr7 (174-301)||(7240754-7240881)
chr7 (243-301)||(7482299-7482357)
chr7 (242-284)||(36033241-36033283)
chr7 (243-300)||(9268830-9268887)
chr7 (174-299)||(31319399-31319524)
chr7 (174-299)||(46840865-46840990)
chr7 (243-299)||(22285773-22285829)
chr7 (244-284)||(28469496-28469536)
chr7 (243-299)||(38441534-38441590)
[»] chr2 (46 HSPs)
chr2 (174-303)||(41478644-41478773)
chr2 (174-306)||(44398679-44398811)
chr2 (174-301)||(37990018-37990145)
chr2 (174-300)||(3055557-3055683)
chr2 (174-300)||(15896841-15896967)
chr2 (174-299)||(13197715-13197840)
chr2 (185-306)||(44397540-44397661)
chr2 (174-301)||(15372224-15372351)
chr2 (174-302)||(13344481-13344609)
chr2 (174-304)||(16044322-16044452)
chr2 (174-300)||(38917527-38917653)
chr2 (174-299)||(6648524-6648649)
chr2 (174-299)||(12337942-12338067)
chr2 (174-299)||(37666615-37666740)
chr2 (176-300)||(16243790-16243914)
chr2 (174-284)||(9047760-9047870)
chr2 (174-285)||(30099187-30099298)
chr2 (174-295)||(41492901-41493022)
chr2 (188-300)||(4683951-4684063)
chr2 (185-285)||(12170415-12170515)
chr2 (174-271)||(44804583-44804680)
chr2 (185-280)||(16734802-16734897)
chr2 (185-285)||(36089457-36089557)
chr2 (204-285)||(36688896-36688977)
chr2 (174-302)||(13724107-13724235)
chr2 (174-305)||(37990007-37990138)
chr2 (209-268)||(41453090-41453149)
chr2 (218-284)||(4553059-4553125)
chr2 (179-285)||(20900674-20900780)
chr2 (219-285)||(31150667-31150733)
chr2 (243-301)||(41492894-41492952)
chr2 (174-302)||(3055563-3055691)
chr2 (185-284)||(15243991-15244089)
chr2 (200-300)||(30852648-30852748)
chr2 (199-282)||(15258821-15258904)
chr2 (174-301)||(41478637-41478764)
chr2 (243-301)||(6648517-6648575)
chr2 (243-301)||(9047753-9047811)
chr2 (203-285)||(27279968-27280050)
chr2 (174-300)||(44398691-44398817)
chr2 (174-299)||(13197710-13197835)
chr2 (174-299)||(15896847-15896972)
chr2 (243-300)||(38917521-38917578)
chr2 (243-299)||(12337937-12337993)
chr2 (243-299)||(15372300-15372356)
chr2 (253-301)||(23227356-23227404)
[»] chr1 (48 HSPs)
chr1 (174-301)||(27159363-27159490)
chr1 (174-301)||(44668098-44668225)
chr1 (174-300)||(9981646-9981772)
chr1 (174-300)||(34042695-34042821)
chr1 (174-299)||(31842800-31842925)
chr1 (174-299)||(39401971-39402096)
chr1 (174-299)||(47216704-47216829)
chr1 (174-302)||(11795930-11796058)
chr1 (174-302)||(14984834-14984962)
chr1 (174-301)||(26471070-26471197)
chr1 (174-306)||(1050881-1051013)
chr1 (174-299)||(47777486-47777611)
chr1 (175-299)||(44955212-44955336)
chr1 (174-301)||(12483633-12483760)
chr1 (174-285)||(25694333-25694444)
chr1 (189-299)||(23278021-23278131)
chr1 (185-301)||(47588353-47588469)
chr1 (174-300)||(11897053-11897179)
chr1 (174-285)||(17556766-17556878)
chr1 (174-285)||(47969708-47969820)
chr1 (185-300)||(16448124-16448239)
chr1 (185-300)||(12213490-12213605)
chr1 (185-299)||(37552141-37552255)
chr1 (174-284)||(11989796-11989906)
chr1 (174-302)||(11897059-11897187)
chr1 (241-285)||(37552213-37552257)
chr1 (174-225)||(16448182-16448233)
chr1 (176-285)||(12043618-12043726)
chr1 (185-285)||(12062574-12062673)
chr1 (205-285)||(12062596-12062675)
chr1 (174-301)||(12483626-12483753)
chr1 (243-302)||(34042770-34042829)
chr1 (243-301)||(14984911-14984969)
chr1 (243-285)||(44955220-44955262)
chr1 (174-300)||(47216698-47216824)
chr1 (243-300)||(17556827-17556884)
chr1 (243-300)||(25694393-25694450)
chr1 (174-299)||(27159358-27159483)
chr1 (174-299)||(31842795-31842920)
chr1 (174-299)||(39401966-39402091)
chr1 (174-299)||(44668093-44668218)
chr1 (185-265)||(571542-571621)
chr1 (243-303)||(1050962-1051022)
chr1 (243-299)||(11796007-11796063)
chr1 (204-284)||(21537904-21537984)
chr1 (185-225)||(21537943-21537983)
chr1 (200-264)||(30800460-30800524)
chr1 (243-299)||(47777481-47777537)
[»] scaffold0009 (1 HSPs)
scaffold0009 (174-304)||(49500-49630)
[»] chr5 (37 HSPs)
chr5 (174-299)||(9395350-9395475)
chr5 (174-302)||(36563543-36563671)
chr5 (174-301)||(37148960-37149087)
chr5 (174-300)||(23359941-23360067)
chr5 (174-300)||(41989412-41989538)
chr5 (185-299)||(11795168-11795282)
chr5 (174-300)||(13103023-13103149)
chr5 (174-304)||(17025619-17025749)
chr5 (42-174)||(28000129-28000261)
chr5 (185-300)||(13033050-13033165)
chr5 (189-301)||(582987-583099)
chr5 (174-301)||(37641951-37642079)
chr5 (174-301)||(20848072-20848198)
chr5 (185-304)||(4443955-4444074)
chr5 (174-285)||(26350355-26350466)
chr5 (174-275)||(21575970-21576071)
chr5 (174-278)||(6126845-6126949)
chr5 (221-285)||(38361743-38361807)
chr5 (211-285)||(13539909-13539979)
chr5 (175-285)||(3549553-3549663)
chr5 (241-294)||(966220-966273)
chr5 (185-284)||(36595790-36595886)
chr5 (185-285)||(966162-966262)
chr5 (186-282)||(2629561-2629657)
chr5 (205-281)||(39290792-39290868)
chr5 (176-275)||(2366345-2366444)
chr5 (185-236)||(9006898-9006949)
chr5 (70-141)||(24103002-24103073)
chr5 (243-300)||(11795242-11795299)
chr5 (243-308)||(41989398-41989463)
chr5 (180-284)||(18167334-18167438)
chr5 (243-299)||(23360016-23360072)
chr5 (174-301)||(9395355-9395482)
chr5 (243-301)||(13103098-13103156)
chr5 (243-300)||(17025698-17025755)
chr5 (243-300)||(36563537-36563594)
chr5 (243-299)||(6126898-6126954)
[»] scaffold0482 (1 HSPs)
scaffold0482 (174-301)||(12858-12985)
[»] scaffold0204 (1 HSPs)
scaffold0204 (174-301)||(23783-23910)
[»] scaffold1707 (1 HSPs)
scaffold1707 (185-306)||(1328-1449)
[»] scaffold0464 (1 HSPs)
scaffold0464 (174-299)||(6136-6261)
[»] scaffold0288 (1 HSPs)
scaffold0288 (20-141)||(3727-3848)
[»] scaffold0477 (1 HSPs)
scaffold0477 (14-141)||(4688-4815)
[»] scaffold0011 (1 HSPs)
scaffold0011 (174-281)||(231308-231415)
[»] scaffold0650 (1 HSPs)
scaffold0650 (185-305)||(1-120)
[»] scaffold0415 (1 HSPs)
scaffold0415 (205-300)||(13761-13857)
[»] scaffold0063 (1 HSPs)
scaffold0063 (207-301)||(53379-53471)
[»] scaffold0003 (1 HSPs)
scaffold0003 (174-270)||(312747-312843)


Alignment Details
Target: chr3 (Bit Score: 143; Significance: 6e-75; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 1281242 - 1281084
Alignment:
Q  16 gatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaag 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1281242 gatgaaggaaagaatatgagagaaaaggccatggaattgaagaaggcggcggaggagaacactagaccgggtggttgttcatacatgaacttcgacaaag 1281143  T
Q  116 tgattaaggaagtgttgcttaaacaaaattagatagaatgatattgttctctgcaatgc 174  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  1281142 tgattaaggaaatgttgcttaaacaaaattagatagaatgatattgttttctgcaatgc 1281084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 312 - 434
Target Start/End: Complemental strand, 1281057 - 1280935
Alignment:
Q  312 gggtttgtatctaaaatttcaagctattattatgccttgttgcactgttttaatattatatttaagattaacattatgtgaagcttcaatttgggataat 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  1281057 gggtttgtatctaaaatttcaagctattattatgccttgttgcactgttttaatattatatttaagattaacattatgcgaagcttcaatttgggataac 1280958  T
Q  412 cggccgattttccagttggtttg 434  Q
    |||||||||||||||||||||||    
T  1280957 cggccgattttccagttggtttg 1280935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 44785401 - 44785529
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  44785401 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44785500  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || |||||||||||||    
T  44785501 tcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 19557057 - 19557183
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  19557057 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 19557156  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  19557157 tcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 49823386 - 49823512
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  49823386 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 49823485  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  49823486 tcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 10298104 - 10297979
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  10298104 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 10298005  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  10298004 tcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 176 - 301
Target Start/End: Complemental strand, 22722054 - 22721929
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22721955  T
Q  276 ttataaatagcactggaggtagtatt 301  Q
    |||||||||| || ||||||||||||    
T  22721954 ttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 4238719 - 4238592
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4238719 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 4238620  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  4238619 tcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 8817393 - 8817520
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8817393 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 8817492  T
Q  276 ttataaatagcactggaggtagtatttt 303  Q
    |||||||||| || | ||||||||||||    
T  8817493 ttataaataggaccgaaggtagtatttt 8817520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 34080035 - 34080162
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  34080035 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 34080134  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  34080135 tcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 17653837 - 17653712
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  17653837 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 17653738  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  17653737 tcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 37509046 - 37508921
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  37509046 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 37508947  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  37508946 tcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 48340522 - 48340397
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  48340522 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 48340423  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||| ||||||| || ||||||||||    
T  48340422 tcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 9111499 - 9111627
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  9111499 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 9111598  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || | |||||||||||    
T  9111599 tcttataaataggaccgaaggtagtattt 9111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 2787837 - 2787964
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  2787837 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 2787936  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || |||| |||||||    
T  2787937 tcttataaataggaccggagatagtatt 2787964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 8437550 - 8437423
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  8437550 cctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttc 8437451  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  8437450 tcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 21295331 - 21295458
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  21295331 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttc 21295430  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  21295431 tcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 38964517 - 38964390
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  38964517 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 38964418  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  38964417 tcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 40691001 - 40691128
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  40691001 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttc 40691100  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || |||| |||||||    
T  40691101 tcttataaataggaccggagttagtatt 40691128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 42507360 - 42507487
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  42507360 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttc 42507459  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    | |||||||||| || ||||||||||||    
T  42507460 tattataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 51406798 - 51406673
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  51406798 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 51406699  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||  || ||||||||||    
T  51406698 tcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 42170362 - 42170478
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  42170362 atttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaata 42170461  T
Q  285 gcactggaggtagtatt 301  Q
      || ||||||||||||    
T  42170462 agaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 46208155 - 46208029
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  46208155 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 46208056  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  46208055 tcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 6013341 - 6013461
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||  || |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6013341 cctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 6013440  T
Q  274 tcttataaatagcactggagg 294  Q
    |||||||||| | ||||||||    
T  6013441 tcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 36095696 - 36095811
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  36095696 atttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaata 36095795  T
Q  285 gcactggaggtagtat 300  Q
    | || ||||| |||||    
T  36095796 ggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 33942948 - 33943048
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||||| |||||||||    
T  33942948 atttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaata 33943047  T
Q  285 g 285  Q
    |    
T  33943048 g 33943048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 35513587 - 35513487
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||| |||||| ||| |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  35513587 atttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 35513488  T
Q  285 g 285  Q
    |    
T  35513487 g 35513487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 26019496 - 26019613
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  || ||||||| |||||| |||||||| ||| |||||| | || ||||||||| || |||||| ||| || |||||||||||||||    
T  26019496 atttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaac-tttgttaacccaactttctcttataaata 26019594  T
Q  285 gcactggaggtagtatttt 303  Q
    | |||||||| ||||||||    
T  26019595 gaactggaggaagtatttt 26019613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 303
Target Start/End: Complemental strand, 9213630 - 9213512
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||| |||||| ||| ||||||||||| ||||||||| | |||| ||| | | |||||||||||  ||||||||||||  |||| ||| |||||||||    
T  9213630 atttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtcttttataaata 9213531  T
Q  285 gcactggaggtagtatttt 303  Q
    | || ||||| ||||||||    
T  9213530 ggaccggagggagtatttt 9213512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 17653717 - 17653847
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  17653717 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 17653816  T
Q  274 tcttataaatagcactggaggtagtatttta 304  Q
    |||||||||||| || |||||||||||||||    
T  17653817 tcttataaataggaccggaggtagtatttta 17653847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 29285790 - 29285873
Alignment:
Q  199 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||| |||||||||||| |||||| ||||| |||||| |   ||||||  ||||||||||||||||||||||| |||||||||||    
T  29285790 tttggatcaacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 33128260 - 33128212
Alignment:
Q  245 atacattcacttttgttgacctaaatttctcttataaatagcactggag 293  Q
    ||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  33128260 atacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 34988200 - 34988089
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| |  |||| |||||||| ||||||||||||||||||||||      ||||||| ||  ||||||||||||| |||| ||    
T  34988200 cctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaaagtggaccagatagatcaacttttgttgacccaaatgtc 34988101  T
Q  274 tcttataaatag 285  Q
    ||| ||||||||    
T  34988100 tctaataaatag 34988089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 43323145 - 43323074
Alignment:
Q  214 gttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||| | |||||||||| |||||| ||||||  ||||||||||||| || ||| ||||||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatag 43323074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 4238599 - 4238725
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  4238599 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattc 4238698  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  4238699 tcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 8092684 - 8092602
Alignment:
Q  203 ggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||| |||||||||||||| |||||||||| | || ||||||||  ||||| |||||   || ||||||||||||||||    
T  8092684 ggtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaatag 8092602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 31757457 - 31757539
Alignment:
Q  203 ggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||| |||||||||||||||| ||| ||||||  |  ||||||||||||| |||||||||    |||||||||||||||||    
T  31757457 ggtcaataaaagttgatgtatcttgttcaaaatttgaatcagatacattcacgtttgttgactcggatttctcttataaatag 31757539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 37508926 - 37509052
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  37508926 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 37509025  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  37509026 tcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 40691052 - 40690990
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtattttat 305  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||||||    
T  40691052 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattttat 40690990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 5323321 - 5323220
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagtt-aaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaat 283  Q
    |||||||||  || ||||||||||||||||||||||||| | ||| ||||||||||| || |||||||   ||||||||||  || ||||| || |||||    
T  5323321 atttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgactcaattttcttttgtaaat 5323222  T
Q  284 ag 285  Q
    ||    
T  5323221 ag 5323220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 46208104 - 46208161
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| || ||||| |||||    
T  46208104 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 10297984 - 10298112
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  10297984 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 10298083  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || ||||| |||||||    
T  10298084 tcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 21295382 - 21295326
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| || ||||| ||||    
T  21295382 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 9027147 - 9027197
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatc 224  Q
    |||||||| | |||||||||| ||  |||||||||||||||||||||||||    
T  9027147 cctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 26001141 - 26001179
Alignment:
Q  246 tacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaata 26001179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 44785521 - 44785391
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  44785521 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 44785422  T
Q  274 tcttataaatagcactggaggtagtatttta 304  Q
    |||||||||||| || ||||| |||| ||||    
T  44785421 tcttataaatagaaccggaggaagtagttta 44785391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 45652125 - 45652067
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    |||||||| || ||||||||||  |||| |||||||||||||| |||||||| ||||||    
T  45652125 agatacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 49823506 - 49823380
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  49823506 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 49823407  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  49823406 tcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 1262234 - 1262319
Alignment:
Q  200 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||| ||||||||| | ||||||  | ||| |||||| ||  |||||||||| |||||||||||| ||||| |||||| |||||||    
T  1262234 ttggatcaacaaaaatcgatgtacatggtttaaaatttaaatcagatacattaacttttgttgacgtaaatgtctcttctaaatag 1262319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 9213521 - 9213646
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||| |||  |||  |||||||||||||||||||||| |   ||  ||  | ||| ||||||  | |||||||||||||||||||    
T  9213521 cctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgacctaaatttc 9213620  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    ||| |||||||| || ||||| ||||    
T  9213621 tctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 14848276 - 14848313
Alignment:
Q  188 tataagagaattttgggtcaacaaaagttgatgtatct 225  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  14848276 tataagagaaaattgggtcaacaaaagttgatgtatct 14848313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 19557177 - 19557052
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  19557177 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 19557078  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  19557077 tcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 22721936 - 22722069
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  22721936 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 22722035  T
Q  274 tcttataaatagcactggaggtagtattttattg 307  Q
    |||||||||||| || ||| | ||||| ||||||    
T  22722036 tcttataaataggaccggatggagtatattattg 22722069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 34080155 - 34080030
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  34080155 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaattc 34080056  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  34080055 tcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 48729569 - 48729654
Alignment:
Q  199 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||||||||||| |||||| || ||||||  |  |||||||||  |||||| || ||  |||| |||||||||||||    
T  48729569 tttgggtcaacaaaagttgatatatctaattcaaaattttaatcagatacatcaacttttattaactcaaatgtctcttataaata 48729654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 299
Target Start/End: Original strand, 2131702 - 2131802
Alignment:
Q  199 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagt 298  Q
    ||||||||||||||||||  |||| || ||  |||||| |  ||||||||||  ||||||||||||| |||| ||||| |||| ||| || ||||| |||    
T  2131702 tttgggtcaacaaaagttactgtacctggtgcaaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagt 2131801  T
Q  299 a 299  Q
    |    
T  2131802 a 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 6013392 - 6013336
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||| ||| ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  6013392 agataaatttacttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 38964466 - 38964522
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  38964466 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 42170404 - 42170360
Alignment:
Q  241 ccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    ||||||||||  ||||||||||||| ||| |||||||||||||||    
T  42170404 ccagatacatcaacttttgttgacccaaaattctcttataaatag 42170360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 48340471 - 48340527
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  48340471 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 5e-57; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 42 - 174
Target Start/End: Complemental strand, 1674328 - 1674196
Alignment:
Q  42 ggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 141  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1674328 ggccatggaattgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgcttaaacaa 1674229  T
Q  142 aattagatagaatgatattgttctctgcaatgc 174  Q
    |||||||||||||||||||||| ||||||||||    
T  1674228 aattagatagaatgatattgttttctgcaatgc 1674196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 15888357 - 15888482
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15888357 cctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttc 15888456  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  15888457 tcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 54617 - 54744
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  54617 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 54716  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  54717 tcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 2890167 - 2890294
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  2890167 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 2890266  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  2890267 tcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 7785783 - 7785910
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  7785783 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 7785882  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  7785883 tcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 6552780 - 6552655
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6552780 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 6552681  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  6552680 tcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 7805704 - 7805831
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  7805704 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 7805803  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  7805804 tcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 43199359 - 43199485
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  43199359 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 43199458  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  43199459 tcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 3304283 - 3304408
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  3304283 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3304382  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  3304383 tcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 39571208 - 39571333
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  39571208 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 39571307  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  39571308 tcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 44498192 - 44498317
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  44498192 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44498291  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  44498292 tcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 12343146 - 12343270
Alignment:
Q  175 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttct 274  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  275 cttataaatagcactggaggtagta 299  Q
    ||||||||||| || ||||||||||    
T  12343246 cttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 185 - 300
Target Start/End: Complemental strand, 13578971 - 13578856
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||||||||||||    
T  13578971 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaata 13578872  T
Q  285 gcactggaggtagtat 300  Q
    | ||||||||||||||    
T  13578871 gaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 33289266 - 33289393
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| |||||||||    
T  33289266 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttc 33289365  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  33289366 tcttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 12763659 - 12763785
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  12763659 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 12763758  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||  || |||||||||||    
T  12763759 tcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 25601005 - 25601131
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25601005 cctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 25601104  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| |  |||||||||||    
T  25601105 tcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 32211368 - 32211494
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  32211368 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttc 32211467  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  32211468 tcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 31654738 - 31654613
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  31654738 cctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 31654639  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  31654638 tcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 32114480 - 32114605
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  32114480 cctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 32114579  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  32114580 tcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 7012296 - 7012171
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| |||||||||    
T  7012296 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttc 7012197  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  7012196 tcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 8587284 - 8587170
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  ||| ||||| ||||||||||||||||||||||||||| | || | ||||||  ||||||||||||| || |||||||||||||||    
T  8587284 atttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaata 8587185  T
Q  285 gcactggaggtagta 299  Q
    | || ||||| ||||    
T  8587184 ggaccggagggagta 8587170  T

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Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 4245652 - 4245715
Alignment:
Q  240 tccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatttt 303  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  4245652 tccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 4245715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 24691986 - 24692094
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||| ||| |||| ||||||||||||||||||||| ||||| ||||||| |||| | |||||||||  |||||||||||||||| ||| ||    
T  24691986 tccggtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttttc 24692084  T
Q  276 ttataaatag 285  Q
    ||||||||||    
T  24692085 ttataaatag 24692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 17007025 - 17006925
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||| |||  ||||| ||||||||||||||||  |||| |||||| ||||||| |||  ||||||||||||| || |||||||||||||||    
T  17007025 atttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaata 17006926  T
Q  285 g 285  Q
    |    
T  17006925 g 17006925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 17570222 - 17570322
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||| |||  ||||| ||||||||||||||||  |||| |||||| ||||||| |||  ||||||||||||| || |||||||||||||||    
T  17570222 atttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaata 17570321  T
Q  285 g 285  Q
    |    
T  17570322 g 17570322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 28463716 - 28463614
Alignment:
Q  194 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggag 293  Q
    ||||| |||||||| | ||||||||| ||||| ||| |||||||| |||| ||||||  ||||||||||||| || |||||||||||||||| || ||||    
T  28463716 agaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggag 28463617  T
Q  294 gta 296  Q
    |||    
T  28463616 gta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 20863883 - 20863975
Alignment:
Q  52 ttgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 144  Q
    |||||||||  ||| |||||| |||| ||||| |  ||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  20863883 ttgaagaagaaggcagaggaggacacaagaccggaaggtggttcatatatgaacttggacaaagtgattaaggaggtgttgcttaaacaaaat 20863975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 303
Target Start/End: Complemental strand, 15888477 - 15888348
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | | |  || ||  | | ||||||||  ||||||||||||| ||| |||    
T  15888477 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattc 15888378  T
Q  274 tcttataaatagcactggaggtagtatttt 303  Q
    |||||||||||| |||||||| ||||||||    
T  15888377 tcttataaatagaactggagggagtatttt 15888348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 16686334 - 16686399
Alignment:
Q  79 agaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 144  Q
    ||||| ||||||||||||||||||||||| || |||||||||| ||| || |||||||||||||||    
T  16686334 agacctggtggttgttcatacatgaacttggaaaaagtgattatggaggttttgcttaaacaaaat 16686399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 33057708 - 33057592
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  || ||||||||||| ||||||||||| ||||||| |||| ||| ||||||   | ||||||||| | || ||| |||||||||||    
T  33057708 atttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttataaata 33057609  T
Q  285 gcactggaggtagtatt 301  Q
    | || ||||| ||||||    
T  33057608 ggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 27422304 - 27422239
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacat 250  Q
    ||||||||||||| ||||||||||||||| |  |||||||| |||||||||||| |||| ||||||    
T  27422304 atttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 27422262 - 27422306
Alignment:
Q  241 ccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  27422262 ccagatacattcatttttgttgacccaaatttctcttataaatag 27422306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 35564705 - 35564757
Alignment:
Q  184 catttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 236  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||    
T  35564705 catttataagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 25601056 - 25600999
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  25601056 agatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 28463616 - 28463665
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 223  Q
    |||||||| | |||||||||||||  ||||||||||||||||||||||||    
T  28463616 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtat 28463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 24202985 - 24203089
Alignment:
Q  181 ttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttata 280  Q
    |||||||||||||| |  ||| |||||| ||  |||||||||| | ||| |||||| ||  || ||| || ||||||| ||||| |||||||||||||||    
T  24202985 ttccatttataagaaatattttggtcaataatggttgatgtatttggttcaaaatttaaatcaaatatatccacttttattgacataaatttctcttata 24203084  T
Q  281 aatag 285  Q
    |||||    
T  24203085 aatag 24203089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 28999083 - 28999163
Alignment:
Q  204 gtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||| ||||||| | |||| |||||||||||||| || ||||||||  | ||||||||||| || ||||| |||||||||    
T  28999083 gtcaataaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 7785903 - 7785776
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  7785903 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 7785804  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  7785803 tcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 13246810 - 13246889
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgac 264  Q
    ||||||||||||| ||||| ||||||||| |  |||||| |   |||||||||| |||||||||||  ||||||||||||    
T  13246810 atttataagagaaatttggatcaacaaaaatgaatgtatttgactaaaaattcagtccagatacatgaacttttgttgac 13246889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 15688047 - 15688086
Alignment:
Q  186 tttataagagaattttgggtcaacaaaagttgatgtatct 225  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  15688047 tttataagagaaagttgggtcaacaaaagttgatgtatct 15688086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 39571259 - 39571200
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtattt 302  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  39571259 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 39571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 40355290 - 40355179
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||| ||| ||||||||||||  ||| ||||||||||||| || || ||||||| ||| ||  | |||  |||||  ||||||||| || ||||| ||    
T  40355290 cctccgattctatttataagagatattttggtcaacaaaagtcgacgtgtctagttcaaattttgaaccatgtacatcaacttttgttcacttaaatgtc 40355191  T
Q  274 tcttataaatag 285  Q
    ||||||||||||    
T  40355190 tcttataaatag 40355179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 54737 - 54611
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  54737 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 54638  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  54637 tcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 2890287 - 2890161
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  2890287 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 2890188  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  2890187 tcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 43199479 - 43199353
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  43199479 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattc 43199380  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  43199379 tcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 6552660 - 6552785
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  6552660 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 6552759  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  6552760 tcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 8587175 - 8587224
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 223  Q
    |||||||| | |||||||||||||  || |||||||||||||||||||||    
T  8587175 cctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtat 8587224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 7012245 - 7012305
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatttt 303  Q
    ||||||||  ||||||||||| | ||| ||||||||||||||| || ||||| ||||||||    
T  7012245 agatacatcaacttttgttgatccaaaattctcttataaataggaccggaggaagtatttt 7012305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 12763710 - 12763650
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatttt 303  Q
    ||||||||  ||||||||||||| ||| || |||||||||||| || ||||| ||||||||    
T  12763710 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatttt 12763650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 13246848 - 13246808
Alignment:
Q  245 atacattcacttttgttgacctaaatttctcttataaatag 285  Q
    ||||||||| ||||||||| | |||||||||||||||||||    
T  13246848 atacattcatttttgttgatccaaatttctcttataaatag 13246808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 17006927 - 17006967
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatct 225  Q
    |||||||||||||  ||||||||||||||||||||| ||||    
T  17006927 atttataagagaaagttgggtcaacaaaagttgatggatct 17006967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 17570320 - 17570280
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatct 225  Q
    |||||||||||||  ||||||||||||||||||||| ||||    
T  17570320 atttataagagaaagttgggtcaacaaaagttgatggatct 17570280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 33289317 - 33289261
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  33289317 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 4e-54; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 7579435 - 7579304
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  7579435 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttc 7579336  T
Q  274 tcttataaatagcactggaggtagtattttat 305  Q
    |||||||||||| || ||||||||||| ||||    
T  7579335 tcttataaataggaccggaggtagtatattat 7579304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 47833736 - 47833609
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  47833736 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 47833637  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  47833636 tcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 3372246 - 3372119
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  3372246 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3372147  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  3372146 tcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 48336388 - 48336261
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  48336388 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 48336289  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  48336288 tcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 6121898 - 6122023
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  6121898 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 6121997  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  6121998 tcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 20538691 - 20538816
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  20538691 cctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 20538790  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  20538791 tcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 46797850 - 46797725
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  46797850 cctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 46797751  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  46797750 tcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 53337495 - 53337370
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  53337495 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 53337396  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  53337395 tcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 3993090 - 3992974
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  3993090 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaata 3992991  T
Q  285 gcactggaggtagtatt 301  Q
    | || ||||||||||||    
T  3992990 ggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 42797857 - 42797730
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  42797857 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 42797758  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    ||||||| |||| || ||||||||||||    
T  42797757 tcttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 24704484 - 24704370
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  24704484 atttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 24704385  T
Q  285 gcactggaggtagta 299  Q
    | || ||||||||||    
T  24704384 ggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 303
Target Start/End: Complemental strand, 43900674 - 43900545
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  43900674 cctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttc 43900575  T
Q  274 tcttataaatagcactggaggtagtatttt 303  Q
    |||||||||||| || ||||| ||||||||    
T  43900574 tcttataaataggaccggagggagtatttt 43900545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 174 - 306
Target Start/End: Original strand, 51894587 - 51894719
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||||||     
T  51894587 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttt 51894686  T
Q  274 tcttataaatagcactggaggtagtattttatt 306  Q
    |||||||||||| || |||||||||||| ||||    
T  51894687 tcttataaataggaccggaggtagtattatatt 51894719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 33621921 - 33621810
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  33621921 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 33621822  T
Q  274 tcttataaatag 285  Q
    ||||||||||||    
T  33621821 tcttataaatag 33621810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 3904688 - 3904814
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  3904688 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3904787  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    | |||||||||| || |||||||||||    
T  3904788 ttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 47838622 - 47838748
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  47838622 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttc 47838721  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| |  |||||||||||    
T  47838722 tcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 5987000 - 5986876
Alignment:
Q  175 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttct 274  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttct 5986901  T
Q  275 cttataaatagcactggaggtagta 299  Q
    ||||||||||| |  ||||||||||    
T  5986900 cttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 52756789 - 52756675
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  52756789 atttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaata 52756690  T
Q  285 gcactggaggtagta 299  Q
    | || |||| |||||    
T  52756689 ggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 300
Target Start/End: Complemental strand, 33551312 - 33551200
Alignment:
Q  188 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagca 287  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||| |    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaatagga 33551213  T
Q  288 ctggaggtagtat 300  Q
    | |||||||||||    
T  33551212 ccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 41469771 - 41469899
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  41469771 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 41469870  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    | |||||||||| || | ||| |||||||    
T  41469871 ttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 3422185 - 3422075
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| |||||||||||||||||||    
T  3422185 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttc 3422087  T
Q  274 tcttataaatag 285  Q
    ||||||||||||    
T  3422086 tcttataaatag 3422075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 40913194 - 40913320
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  40913194 cctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 40913293  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  40913294 tcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 300
Target Start/End: Complemental strand, 26231688 - 26231576
Alignment:
Q  188 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagca 287  Q
    |||||||||||||| |||  |||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| |    
T  26231688 tataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaatagga 26231589  T
Q  288 ctggaggtagtat 300  Q
    | |||||||||||    
T  26231588 ccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 41615683 - 41615792
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||||||||||||  |||| ||||||||||||||||||| |||||||||||| | |||| ||||||| |||||||||||||||| ||||||    
T  41615683 tccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctc 41615782  T
Q  276 ttataaatag 285  Q
    ||||||||||    
T  41615783 ttataaatag 41615792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 50430434 - 50430533
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||| |  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||  ||||||||||||| || || ||||||||||||    
T  50430434 atttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 17344327 - 17344227
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||| ||||| ||||||||||||||||||||   ||||||||||| | |||||||||  |||||||||||  ||| |||||||||||||||    
T  17344327 atttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaata 17344228  T
Q  285 g 285  Q
    |    
T  17344227 g 17344227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 25855182 - 25855097
Alignment:
Q  200 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    ||||||| |||||||| ||||||| | |||||||||||| |||| ||||||| ||||||||||||  || ||||||| ||||||||    
T  25855182 ttgggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaatag 25855097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 31013117 - 31013036
Alignment:
Q  203 ggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||| |||||||||||||||| |||| || ||| ||||||  ||||||||||| |||||| ||| |||||||||    
T  31013117 ggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 29845739 - 29845644
Alignment:
Q  205 tcaacaaaagtt-gatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    |||||||||||| ||||||| |||||||||||||| | || ||| ||| | ||||||||||||||||||||||||||| ||| |||| ||| |||||    
T  29845739 tcaacaaaagtttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggactgaagggagtat 29845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 4780420 - 4780311
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||| ||||||||  |||||||||  || | ||||||| |||||||  |||  ||||| ||    
T  4780420 cctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaattggat-cggatacatccacttttactgatgtaaatgtc 4780322  T
Q  274 tcttataaata 284  Q
    |||||||||||    
T  4780321 tcttataaata 4780311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 4780368 - 4780425
Alignment:
Q  242 cagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||    
T  4780368 cagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 1716413 - 1716316
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||| ||| ||||||| |||||||||| |||| ||| ||||||  || |||||||||  ||||||||||||| || | |||||||||||||    
T  1716413 atttataagagaagtttaggtcaaccaaagttgatgcatctggtt-aaaattggat-cagatacatcaacttttgttgaccaaattatctcttataaata 1716316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 9876739 - 9876648
Alignment:
Q  199 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactg 290  Q
    ||||||||||||||| || |||||| | |||||||| |  |  |||||||||| | ||||||| || |||||||||||||||||||| ||||    
T  9876739 tttgggtcaacaaaaatttatgtatttggttaaaaaattgagtcagatacattaaattttgttaacgtaaatttctcttataaatagaactg 9876648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 43095237 - 43095336
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||  |||||| |||||||| || |||||| | ||| ||||||    ||||||||||| | |||||||||| ||||| |||||||||||||    
T  43095237 atttataagagacgtttgggccaacaaaaattaatgtatatggttcaaaatttggaccagatacattaatttttgttgacttaaatatctcttataaata 43095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 45478206 - 45478140
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacatt 251  Q
    ||||||||||||| | |||||||| |||||||||||||||  |||||||||||| |  |||||||||    
T  45478206 atttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagttgagatacatt 45478140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 17236912 - 17236864
Alignment:
Q  175 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 223  Q
    ||||||| | |||||||||| || |||||||||||||||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 41594765 - 41594673
Alignment:
Q  188 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttata 280  Q
    ||||||||||  ||||||||||  |||||||||||||| ||| ||||||    ||| ||||||  ||||||||||||| || |||||||||||    
T  41594765 tataagagaaagttgggtcaacttaagttgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 42797806 - 42797862
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| || ||||| ||||    
T  42797806 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 24704375 - 24704486
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||| ||||||||||||| ||| |||    
T  24704375 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattc 24704474  T
Q  274 tcttataaatag 285  Q
    ||||||||||||    
T  24704475 tcttataaatag 24704486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 44900178 - 44900080
Alignment:
Q  201 tgggtcaacaaaagttgatgtatctagttaaa-aattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    |||||||||||||||||| |||||| |||||| ||||  | ||||||| ||  |||||||||||||  ||| |||||||||||||| || ||||| ||||    
T  44900178 tgggtcaacaaaagttgacgtatctggttaaacaattgga-ccagatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 3422134 - 3422192
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  3422134 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 23226019 - 23226133
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||  ||| | ||||||||| |||||||||| |||| ||||||     |||||||||  ||||||||||||| |||| |||  ||||||||    
T  23226019 atttataagagatatttagatcaacaaaaattgatgtatccagttcaaaatttggatcagatacataaacttttgttgacccaaatatcttctataaata 23226118  T
Q  285 gcactggaggtagta 299  Q
    | | |||||| ||||    
T  23226119 ggattggaggaagta 23226133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 41469822 - 41469764
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  41469822 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 47838673 - 47838615
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  47838673 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 51894640 - 51894582
Alignment:
Q  241 ccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  51894640 ccagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 7579315 - 7579440
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| ||| |||||||||  |||||| | | |  || ||  | | ||||||||  ||||||||||||| ||| |||    
T  7579315 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattc 7579414  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  7579415 tcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 41594660 - 41594765
Alignment:
Q  175 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttct 274  Q
    ||||||| |||  ||||||||||  |||||||||||||||||||||||| | ||  ||| ||  | ||||||||||  ||||  ||||||| || |||||    
T  41594660 ctccggtcccacatataagagaaagttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatcaacttaagttgacccaactttct 41594759  T
Q  275 cttata 280  Q
    ||||||    
T  41594760 cttata 41594765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 46797730 - 46797771
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagt 215  Q
    |||||||||| ||||||||||||| ||| |||||||||||||    
T  46797730 cctccggttctatttataagagaaatttaggtcaacaaaagt 46797771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 47833616 - 47833741
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  47833616 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 47833715  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  47833716 tcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 6121949 - 6121893
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  6121949 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  245 atacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 8099655 - 8099529
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8099655 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttc 8099556  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  8099555 tcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 8382974 - 8383101
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  8382974 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 8383073  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  8383074 tcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 2830460 - 2830334
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  2830460 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 2830361  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  2830360 tcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 11572150 - 11572276
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  11572150 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 11572249  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  11572250 tcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 6330240 - 6330115
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6330240 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 6330141  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  6330140 tcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 26602448 - 26602323
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  26602448 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 26602349  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  26602348 tcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 6143677 - 6143553
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6143677 tccggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctc 6143578  T
Q  276 ttataaatagcactggaggtagtat 300  Q
    |||||||||| |  |||||||||||    
T  6143577 ttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 13853598 - 13853725
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  13853598 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 13853697  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || | ||||||||||    
T  13853698 tcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 176 - 301
Target Start/End: Original strand, 33052801 - 33052926
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  33052801 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 33052900  T
Q  276 ttataaatagcactggaggtagtatt 301  Q
    |||||||||| || ||||||||||||    
T  33052901 ttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 6068691 - 6068564
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||     
T  6068691 cctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttt 6068592  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  6068591 tcttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 8417809 - 8417908
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8417809 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaata 8417908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 35031006 - 35031132
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||     
T  35031006 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttt 35031105  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  35031106 tcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 9644821 - 9644696
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||    
T  9644821 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttc 9644722  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  9644721 tcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 9650838 - 9650713
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||    
T  9650838 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttc 9650739  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  9650738 tcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 28747150 - 28747248
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaat 283  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  28747150 atttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 4617152 - 4617020
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    ||||| |||||||||| ||||   ||| ||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||    
T  4617152 gagataaaggaaagaaaatgaagcaaaaggccatggagttgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttgaacaa 4617053  T
Q  114 agtgattaaggaagtgttgcttaaacaaaatta 146  Q
    ||| |||||||| ||||||||||||||||||||    
T  4617052 agttattaaggatgtgttgcttaaacaaaatta 4617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  207 aacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 4480817 - 4480688
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| ||||   ||| ||||||||| |||||||||  ||| |||||| |||| ||||| ||||||||||||||||||||||| |||||||||||    
T  4480817 aaggaaagaagatgaagcaaaaggccatggagttgaagaagatggcagaggaggacacaagacctggtggttgttcatacatgaacttggacaaagtgat 4480718  T
Q  120 taaggaagtgttgcttaaacaaaattagat 149  Q
    |||||| || ||||||||||||||||||||    
T  4480717 taaggaggtcttgcttaaacaaaattagat 4480688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 17992102 - 17992018
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaa 269  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  17992102 atttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 4516451 - 4516316
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    ||||| |||||||||| |||||  ||| |||||||||||||||||||  ||| |||||| |||| ||||||||||||||||||||  ||||||| || ||    
T  4516451 gagataaaggaaagaagatgaggcaaaaggccatggaattgaagaagaaggcagaggaggacacaagaccaggtggttgttcatatgtgaacttggaaaa 4516352  T
Q  114 agtgattaaggaagtgttgcttaaacaaaattagat 149  Q
    |||||||||||| ||| |||| ||||||||||||||    
T  4516351 agtgattaaggaggtgctgctcaaacaaaattagat 4516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 4601919 - 4601783
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    ||||| |||| ||||| |||||  ||| ||||||||| |||||||||  |||  |||||| |||||||| ||||||||||||||||| |||| | |||||    
T  4601919 gagataaaggcaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagactaggtggttgttcatacaagaacctggacaa 4601820  T
Q  114 agtgattaaggaagtgttgcttaaacaaaattagata 150  Q
    ||| |||||||| ||||||||||||||||||||||||    
T  4601819 agttattaaggaggtgttgcttaaacaaaattagata 4601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 4504405 - 4504534
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| |||||  ||| ||||||||| |||||||||  ||| |||||| |||| ||||  ||||||||||||||||||||||| |||||||||||    
T  4504405 aaggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggaggacacaagacttggtggttgttcatacatgaacttggacaaagtgat 4504504  T
Q  120 taaggaagtgttgcttaaacaaaattagat 149  Q
    |||||| || ||||||||| || |||||||    
T  4504505 taaggacgtcttgcttaaaaaatattagat 4504534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 4560637 - 4560506
Alignment:
Q  13 tgagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgaca 112  Q
    |||||| |||||||||| |||||  ||| |||||||||  |||||||   |||||||| | |||| ||||| || |||||||||||||||||||| || |    
T  4560637 tgagataaaggaaagaagatgaggcaaaaggccatggagctgaagaaaaaggcggaggtgtacacgagacctggaggttgttcatacatgaacttggaga 4560538  T
Q  113 aagtgattaaggaagtgttgcttaaacaaaat 144  Q
    ||||||||||||| ||||||||||||||||||    
T  4560537 aagtgattaaggaggtgttgcttaaacaaaat 4560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 3171865 - 3171736
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| |||||  ||||||||||||| |||||||||  ||| |||||| | || |||   ||||||||||||||||||||||| || ||||||||    
T  3171865 aaggaaagaagatgaggcaaagggccatggagttgaagaagaaggcagaggaggatacaagatttggtggttgttcatacatgaacttggataaagtgat 3171766  T
Q  120 taaggaagtgttgcttaaacaaaattagat 149  Q
    |||||| || |||||||||||| |||||||    
T  3171765 taaggaggtcttgcttaaacaatattagat 3171736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 4571063 - 4570972
Alignment:
Q  53 tgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 144  Q
    ||||||||  |||||||||| |||| ||||| ||||||||||||||||||||||| || |||||||||||||| || ||||||||| |||||    
T  4571063 tgaagaagaaggcggaggaggacacgagacctggtggttgttcatacatgaacttggaaaaagtgattaaggaggttttgcttaaataaaat 4570972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 4505922 - 4505852
Alignment:
Q  79 agaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattagat 149  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  4505922 agacctggtggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaaacaaaattagat 4505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 22896576 - 22896471
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||         |||||||||||| ||||||||||||||    
T  22896576 atttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaata 22896486  T
Q  285 gcactggaggtagta 299  Q
    | || ||||| ||||    
T  22896485 ggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 4557206 - 4557125
Alignment:
Q  63 ggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 144  Q
    |||||||||| |||| ||||| |||||||||||||||||||| || || |||||||||||||| || |||||||||||||||    
T  4557206 ggcggaggaggacacgagacctggtggttgttcatacatgaatttggaaaaagtgattaaggaggttttgcttaaacaaaat 4557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 4493014 - 4492950
Alignment:
Q  85 ggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattagat 149  Q
    ||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  4493014 ggtggttgttcatacatgaacttggacaaagtgatcaaggatgtcttgcttaaacaaaattagat 4492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 4592355 - 4592231
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| |||||  ||| ||| || || |||||||||  ||| ||||||||||| ||||| || ||||||||||| |||||||| |||||| ||||    
T  4592355 aaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaaggcagaggagaacacgagacctggaggttgttcatatatgaacttggacaaattgat 4592256  T
Q  120 taaggaagtgttgcttaaacaaaat 144  Q
     ||||| |||||||||||| |||||    
T  4592255 caaggaggtgttgcttaaataaaat 4592231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 4626073 - 4625946
Alignment:
Q  22 ggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgatta 121  Q
    |||||||| |||||  ||| ||||||||| |||||||||  ||| |||||||||| ||| || ||||||||||||||||||||  | || ||| ||||||    
T  4626073 ggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacattagtcccggtggttgttcatacatgaatatggataaactgatta 4625974  T
Q  122 aggaagtgttgcttaaacaaaattagat 149  Q
    | || || |||||||||||| |||||||    
T  4625973 atgatgtcttgcttaaacaatattagat 4625946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 4585758 - 4585636
Alignment:
Q  22 ggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgatta 121  Q
    |||||||| |||||  ||| ||| || || |||||||||  |||||||||| |||| ||||| || |||||||||||||| ||||| || ||||||||||    
T  4585758 ggaaagaagatgaggcaaaaggcaatcgagttgaagaagaaggcggaggaggacacgagacctggaggttgttcatacataaacttggaaaaagtgatta 4585659  T
Q  122 aggaagtgttgcttaaacaaaat 144  Q
    |||| || ||||||||| |||||    
T  4585658 aggaggttttgcttaaataaaat 4585636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 4299795 - 4299876
Alignment:
Q  67 gaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattaga 148  Q
    |||||||||||||  |||||||||||||| ||||||||||| |||||||| |||||||| ||  ||||||||||| ||||||    
T  4299795 gaggagaacactaatccaggtggttgttcgtacatgaacttggacaaagttattaaggaggttctgcttaaacaatattaga 4299876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 4613726 - 4613850
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| |||||  ||| ||| || || |||||||||  ||| |||||| |||| |||||||| ||||||||||| |||||||| |||||||||||    
T  4613726 aaggaaagaaaatgaggcaaaaggcaattgagttgaagaagaaggcagaggaggacacgagaccaggaggttgttcatatatgaacttggacaaagtgat 4613825  T
Q  120 taaggaagtgttgcttaaacaaaat 144  Q
     || || ||| |||| |||||||||    
T  4613826 caatgaggtgctgctgaaacaaaat 4613850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 4461245 - 4461118
Alignment:
Q  22 ggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgatta 121  Q
    |||||||| |||||  ||| || ||||||||| ||||||  || ||||||| | || ||||| || |||  |||||||| |||||| |||||||| ||||    
T  4461245 ggaaagaagatgaggcaaaaggtcatggaattcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcatta 4461146  T
Q  122 aggaagtgttgcttaaacaaaattagat 149  Q
    |||| || ||||||||||||||||||||    
T  4461145 aggatgtcttgcttaaacaaaattagat 4461118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 6549996 - 6549902
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttata 280  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||  ||| ||  ||| | ||||||| ||||||||||||||||||||||||||||    
T  6549996 atttataagagatattttggttaacaaaagttgatgtatctagtccaaattttcatcaa-atacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 7596993 - 7597092
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||| ||||| |||| ||||| |||||||||||||| |||||||||||||| | | |||||||  ||||||||| ||  || |||||||||||||||    
T  7596993 atttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaactttctcttataaata 7597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 4563789 - 4563711
Alignment:
Q  66 ggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 144  Q
    |||||| ||||| ||| | || |||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||    
T  4563789 ggaggaaaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 4563711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 4574438 - 4574308
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    ||||| |||||||||| |||||  |||  ||||| ||  ||||||||  || ||||| | |||| ||||| || |||||||||||||  ||||| || ||    
T  4574438 gagataaaggaaagaagatgaggcaaaaagccattgagctgaagaagaaggtggaggtggacacgagacctggaggttgttcatacacaaacttggagaa 4574339  T
Q  114 agtgattaaggaagtgttgcttaaacaaaat 144  Q
    |||||||||||| ||||||||||||||||||    
T  4574338 agtgattaaggaggtgttgcttaaacaaaat 4574308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 6068974 - 6069056
Alignment:
Q  203 ggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||||| ||| ||||| ||||||||||| |  ||| ||||||| |||||||||||||||||| ||| ||||||||||    
T  6068974 ggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaatag 6069056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 4606958 - 4607023
Alignment:
Q  79 agaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 144  Q
    ||||||||||||| ||||||||||||||| || |||||||||||| | || |||||||||||||||    
T  4606958 agaccaggtggtttttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaaaat 4607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 4579524 - 4579432
Alignment:
Q  52 ttgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 144  Q
    |||||||||  || ||||||| |||| ||||| || || ||||||||||||||||| || |||||||||||||| ||||| || |||||||||    
T  4579524 ttgaagaagaaggtggaggaggacacgagacctggaggctgttcatacatgaacttggagaaagtgattaaggaggtgttactcaaacaaaat 4579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 4267224 - 4267295
Alignment:
Q  70 gagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 141  Q
    |||||||| ||||| ||||||| ||||||||||||||| |||||||| |||||||| ||  |||||||||||    
T  4267224 gagaacacaagacctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 4267295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 4622272 - 4622145
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    ||||| |||||||||| |||||| ||| ||||||||| |||||| ||  ||| || ||||  || || || ||||||||||||||||  ||||| |||||    
T  4622272 gagataaaggaaagaagatgagacaaaaggccatggagttgaaggagaaggcagatgagacgaccagccctggtggttgttcatacaacaacttggacaa 4622173  T
Q  114 agtgattaaggaagtgttgcttaaacaa 141  Q
    ||| |||||||| ||  |||||||||||    
T  4622172 agttattaaggaggtcatgcttaaacaa 4622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 4490363 - 4490481
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| |||||  ||| ||| | ||| |||||||||  ||| | |||| |||| ||||  |||||| |||||||||||||||| |||||||||||    
T  4490363 aaggaaagaagatgaggcaaaaggcgacggagttgaagaagaaggcagcggaggacacgagactcggtggtagttcatacatgaacttggacaaagtgat 4490462  T
Q  120 taaggaagtgttgcttaaa 138  Q
    |||||| ||  ||||||||    
T  4490463 taaggatgtcatgcttaaa 4490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 4515202 - 4515256
Alignment:
Q  93 ttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattag 147  Q
    ||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  4515202 ttcatacttgaacttggacaaagtgatcaaggaggtgttgcttaaacaaaattag 4515256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 4598301 - 4598175
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    ||||| |||||||||| |||||  ||| | | || || ||||||| |  |||||||||| | || ||||  || |||||||||||||||||||| || ||    
T  4598301 gagataaaggaaagaaaatgaggcaaaagacaattgatttgaagatgaaggcggaggaggaaacgagacttggaggttgttcatacatgaacttagagaa 4598202  T
Q  114 agtgattaaggaagtgttgcttaaaca 140  Q
    |||||||||||| ||||| ||||||||    
T  4598201 agtgattaaggaggtgtttcttaaaca 4598175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 14936491 - 14936573
Alignment:
Q  203 ggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||||| |||||||||||||||| ||||   |||| ||||||  ||| ||||||||| |||| ||||||||||||||    
T  14936491 ggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaatag 14936573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 3788151 - 3788050
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttg-ttgacctaaatttctcttataaat 283  Q
    |||||||||| || ||| ||||||||||||||||||||| ||||||| |||||| |||| || ||   | ||||| |||||| || ||||||||||||||    
T  3788151 atttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtccacatccaacaaattttgattgacccaactttctcttataaat 3788052  T
Q  284 ag 285  Q
    ||    
T  3788051 ag 3788050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 8099535 - 8099664
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | | |  || ||  | | ||||||||  ||||||||||||| ||| |||    
T  8099535 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattc 8099634  T
Q  274 tcttataaatagcactggaggtagtatttt 303  Q
    |||||||||||| || ||||| ||||||||    
T  8099635 tcttataaataggaccggagggagtatttt 8099664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 3421589 - 3421685
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataa 281  Q
    |||||||||| || |||| |||||||||||||||| |||||  ||||||| |||||| ||||| ||  ||||||||||||  || |||| |||||||    
T  3421589 atttataagaaaaatttgagtcaacaaaagttgatatatcttattaaaaaatcaatctagatatatcaacttttgttgactcaactttcacttataa 3421685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 4392094 - 4392160
Alignment:
Q  80 gaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaatta 146  Q
    |||| ||||||| ||||| ||||||||| |||||| |||||||||| || ||||||||||| |||||    
T  4392094 gacctggtggttcttcattcatgaacttggacaaactgattaaggaggtcttgcttaaacataatta 4392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 4256620 - 4256741
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| |||||  ||| || ||||||||||||||||  | | ||| ||||||| || |||| ||||  |||||  |||||||| |||||||| ||    
T  4256620 aaggaaagaagatgaggcaaaaggtcatggaattgaagaagaagacagagaagaacaccagcccagctggtcattcattgatgaacttggacaaagttat 4256719  T
Q  120 taaggaagtgttgcttaaacaa 141  Q
    |||||| ||  |||||||||||    
T  4256720 taaggaggtcatgcttaaacaa 4256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 33393165 - 33393213
Alignment:
Q  188 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 236  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||||    
T  33393165 tataagagaaatttgagtcaataaaagttgatgtatctagtttaaaatt 33393213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 4568123 - 4568072
Alignment:
Q  74 acactagaccaggtggttgttcatacatgaacttcgacaaagtgattaagga 125  Q
    |||| ||||| |||| || ||||||||||||||| |||||||||||||||||    
T  4568123 acacaagacctggtgattcttcatacatgaacttggacaaagtgattaagga 4568072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 9644770 - 9644829
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtattt 302  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  9644770 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 9650787 - 9650846
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtattt 302  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  9650787 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 26602328 - 26602455
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  26602328 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 26602427  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  26602428 tcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 6330120 - 6330246
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  6330120 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 6330219  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  6330220 tcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 11572270 - 11572144
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  11572270 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 11572171  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  11572170 tcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 2830340 - 2830465
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  2830340 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 2830439  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  2830440 tcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 4260156 - 4260265
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    |||| ||||||||||| |||||  ||| || |||||| ||||||| |  ||| ||||||||||| || |||  ||||| |||||  |||||||| |||||    
T  4260156 gagaagaaggaaagaagatgaggcaaaaggtcatggagttgaagaggaaggcagaggagaacaccagtccatctggttattcattgatgaacttggacaa 4260255  T
Q  114 agtgattaag 123  Q
    ||| ||||||    
T  4260256 agttattaag 4260265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 8383094 - 8382969
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  8383094 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 8382995  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  8382994 tcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 13853649 - 13853592
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  13853649 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 28747190 - 28747133
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| |||| ||| |||||    
T  28747190 agatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 8026119 - 8026175
Alignment:
Q  192 agagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatac 248  Q
    |||||| ||| |||||||||||||||||| |||  | |||||||||| |||||||||    
T  8026119 agagaaatttaggtcaacaaaagttgatgcatccggataaaaattcagtccagatac 8026175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 8186481 - 8186441
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatct 225  Q
    |||||||| |||| ||||| |||||||||||||||||||||    
T  8186481 atttataaaagaaatttggatcaacaaaagttgatgtatct 8186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 7e-53; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 31319404 - 31319529
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  31319404 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 31319503  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  31319504 tcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 178 - 302
Target Start/End: Original strand, 1565738 - 1565862
Alignment:
Q  178 cggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctctt 277  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1565738 cggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctt 1565837  T
Q  278 ataaatagcactggaggtagtattt 302  Q
    |||||||| || |||||||||||||    
T  1565838 ataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 46840985 - 46840857
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  46840985 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 46840886  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || |||||||||||||    
T  46840885 tcttataaataggaccggaggtagtattt 46840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 1738452 - 1738579
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  1738452 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 1738551  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  1738552 tcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 7240874 - 7240747
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  7240874 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 7240775  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  7240774 tcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 9268881 - 9268754
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9268881 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 9268782  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| ||  |||||||||||    
T  9268781 tcttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 38063929 - 38064044
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  38063929 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 38064028  T
Q  285 gcactggaggtagtat 300  Q
    | || |||||||||||    
T  38064029 ggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 7482350 - 7482224
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  7482350 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 7482251  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  7482250 tcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 23314144 - 23314269
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23314144 cctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 23314243  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  23314244 tcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 22285824 - 22285697
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  22285824 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 22285725  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  22285724 tcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 28536756 - 28536882
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  28536756 cctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttc 28536855  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  28536856 tcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 36583509 - 36583395
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  36583509 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaata 36583410  T
Q  285 gcactggaggtagta 299  Q
    | || ||||||||||    
T  36583409 ggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 38441585 - 38441460
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||||    
T  38441585 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttc 38441486  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  38441485 tcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 94334 - 94448
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  94334 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaata 94433  T
Q  285 gcactggaggtagta 299  Q
    | || |||| |||||    
T  94434 ggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 36016212 - 36016326
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  36016212 atttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 36016311  T
Q  285 gcactggaggtagta 299  Q
    | || ||||| ||||    
T  36016312 ggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 4790373 - 4790247
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||     
T  4790373 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttt 4790274  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  4790273 tcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 33418500 - 33418392
Alignment:
Q  175 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttct 274  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 33418401  T
Q  275 cttataaat 283  Q
    |||| ||||    
T  33418400 cttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 185 - 302
Target Start/End: Complemental strand, 9575523 - 9575406
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  || ||||||||||| |||||||||||||||||||||||| || | |||| || ||||||||||||| || ||||||||| |||||    
T  9575523 atttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaata 9575424  T
Q  285 gcactggaggtagtattt 302  Q
    | ||  |||| |||||||    
T  9575423 ggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 40840126 - 40840235
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | ||||||||||||| |||  |||||||||||||||||||  |||||||||||||| |||| ||||||| | ||||||| || ||| ||||||    
T  40840126 tccggtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctc 40840225  T
Q  276 ttataaatag 285  Q
    || |||||||    
T  40840226 ttctaaatag 40840235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 284
Target Start/End: Original strand, 7269412 - 7269520
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||||||||||||  |||||| |||||||||||||| |||| |||||||||||| |  ||||||||  | ||||||||||| || ||| ||    
T  7269412 tccggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttc 7269511  T
Q  276 ttataaata 284  Q
    |||||||||    
T  7269512 ttataaata 7269520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 3086479 - 3086426
Alignment:
Q  85 ggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaa 138  Q
    ||||||||||||||||||||||| |||||||| |||||||| || |||||||||    
T  3086479 ggtggttgttcatacatgaacttggacaaagttattaaggaggtcttgcttaaa 3086426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 7661190 - 7661090
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||  ||  ||    |||| |||||  |||||| ||||| |||||||||||||||||||    
T  7661190 atttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacataaatttctcttataaata 7661091  T
Q  285 g 285  Q
    |    
T  7661090 g 7661090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 36033242 - 36033342
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||| || ||| |||||||||||||||||||||||  | ||||||||||| |||| ||||  | |||||||| || || ||| | |||||||||    
T  36033242 atttataagataaatttaggtcaacaaaagttgatgtatctgatcaaaaattcaattcagacacataaatttttgttggccaaactttattttataaata 36033341  T
Q  285 g 285  Q
    |    
T  36033342 g 36033342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 14706792 - 14706710
Alignment:
Q  203 ggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaa-atttctcttataaata 284  Q
    ||||||||||||||||| |||||  |||| |||||||| |||||||||  ||||||||| ||||||  ||| |||||||||||    
T  14706792 ggtcaacaaaagttgatatatctgattaacaattcaattcagatacatcaacttttgttaacctaatttttttcttataaata 14706710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 2853687 - 2853787
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||| |||||||| ||||| |||||||||||  ||||||||||||||||| |  | ||| ||||||  | ||||||||||| || | ||| |||||||||    
T  2853687 atttgtaagagaaatttggatcaacaaaagtatatgtatctagttaaaaaattgaaccatatacatcaatttttgttgaccaaactatcttttataaata 2853786  T
Q  285 g 285  Q
    |    
T  2853787 g 2853787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 1738572 - 1738445
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  1738572 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 1738473  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  1738472 tcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 7240754 - 7240881
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  7240754 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 7240853  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  7240854 tcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 7482299 - 7482357
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  7482299 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 36033283 - 36033241
Alignment:
Q  242 cagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||  |||||||||||||||||||| |||||||||||    
T  36033283 cagatacatcaacttttgttgacctaaatttatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 9268830 - 9268887
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  9268830 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 31319524 - 31319399
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  31319524 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 31319425  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  31319424 tcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 46840865 - 46840990
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  46840865 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 46840964  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  46840965 tcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 22285773 - 22285829
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  22285773 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 28469536 - 28469496
Alignment:
Q  244 gatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||| |||||||||||||||||| ||| |||||||||    
T  28469536 gatacattaacttttgttgacctaaatgtcttttataaata 28469496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 38441534 - 38441590
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  38441534 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 7e-53; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 41478644 - 41478773
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  41478644 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 41478743  T
Q  274 tcttataaatagcactggaggtagtatttt 303  Q
    |||||||||||| || ||||||||||||||    
T  41478744 tcttataaataggaccggaggtagtatttt 41478773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 174 - 306
Target Start/End: Complemental strand, 44398811 - 44398679
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  44398811 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44398712  T
Q  274 tcttataaatagcactggaggtagtattttatt 306  Q
    |||||||||||| || ||||||||||| |||||    
T  44398711 tcttataaataggaccggaggtagtatgttatt 44398679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 37990018 - 37990145
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  37990018 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 37990117  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  37990118 tcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 3055683 - 3055557
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  3055683 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3055584  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  3055583 tcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 15896967 - 15896841
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  15896967 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 15896868  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  15896867 tcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 13197715 - 13197840
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  13197715 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 13197814  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  13197815 tcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 306
Target Start/End: Complemental strand, 44397661 - 44397540
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  44397661 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 44397562  T
Q  285 gcactggaggtagtattttatt 306  Q
    | || ||||||||||| |||||    
T  44397561 ggaccggaggtagtatgttatt 44397540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 15372351 - 15372224
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  15372351 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 15372252  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| |||||||| ||||||    
T  15372251 tcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 13344609 - 13344481
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  13344609 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttc 13344510  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || |||||||||||||    
T  13344509 tcttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 16044322 - 16044452
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  16044322 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 16044421  T
Q  274 tcttataaatagcactggaggtagtatttta 304  Q
    |||||||||||| || |||||||||| ||||    
T  16044422 tcttataaataggaccggaggtagtaattta 16044452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 38917527 - 38917653
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||     
T  38917527 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaattta 38917626  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  38917627 tcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 6648524 - 6648649
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||    
T  6648524 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttc 6648623  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  6648624 tcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 12337942 - 12338067
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||     
T  12337942 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttt 12338041  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  12338042 tcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 37666615 - 37666740
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  37666615 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 37666714  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  37666715 tcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 16243790 - 16243914
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||    
T  16243790 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttc 16243889  T
Q  276 ttataaatagcactggaggtagtat 300  Q
    |||||||||| || |||| ||||||    
T  16243890 ttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 174 - 284
Target Start/End: Original strand, 9047760 - 9047870
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  9047760 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttc 9047859  T
Q  274 tcttataaata 284  Q
    |||||||||||    
T  9047860 tcttataaata 9047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 30099187 - 30099298
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  30099187 cctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttc 30099286  T
Q  274 tcttataaatag 285  Q
    ||||||||||||    
T  30099287 tcttataaatag 30099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 41492901 - 41493022
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  41492901 cctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttc 41493000  T
Q  274 tcttataaatagcactggaggt 295  Q
    | |||||||||| |||| ||||    
T  41493001 ttttataaataggactgaaggt 41493022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 300
Target Start/End: Original strand, 4683951 - 4684063
Alignment:
Q  188 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagca 287  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |    
T  4683951 tataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 4684050  T
Q  288 ctggaggtagtat 300  Q
    | |||||||||||    
T  4684051 ccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 12170415 - 12170515
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||| ||||||||| |||||||| ||||||    
T  12170415 atttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaata 12170514  T
Q  285 g 285  Q
    |    
T  12170515 g 12170515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 44804583 - 44804680
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatt 271  Q
    |||||||| | |||||||||||||||||  || |||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||    
T  44804583 cctccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 16734897 - 16734802
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttata 280  Q
    |||||||||||||  ||| || ||||||||||||||||| | |||||||||||| |||||||||||  ||||||||||||| || |||||||||||    
T  16734897 atttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 36089557 - 36089457
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||| ||||||  |||| || || |||||||||||||||||||| ||| ||  |  ||||||| || |||||||||||||||||| |||||||||||||    
T  36089557 atttagaagagatatttgagttaataaaagttgatgtatctagtttaaattttgaatcagatacgttaacttttgttgacctaaatatctcttataaata 36089458  T
Q  285 g 285  Q
    |    
T  36089457 g 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 36688977 - 36688896
Alignment:
Q  204 gtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||| ||||||||||| ||| ||||||||  | ||||||||  || |||||||||| || ||||||||||||||||    
T  36688977 gtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaatag 36688896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 13724107 - 13724235
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||| ||||||  | | ||||||||||||||||||||| | |||||||| |    ||||||||||  |||||||||||||  ||| ||    
T  13724107 cctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatc 13724206  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
     ||||||||||| |||| ||| |||||||    
T  13724207 gcttataaataggactgtagggagtattt 13724235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 37990138 - 37990007
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  37990138 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 37990039  T
Q  274 tcttataaatagcactggaggtagtattttat 305  Q
    |||||||||||| || ||||| ||||||||||    
T  37990038 tcttataaataggaccggagggagtattttat 37990007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  209 caaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaa 268  Q
    ||||||||||||||| | |||||||||||| |||| ||||||| |||||| |||||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 4553059 - 4553125
Alignment:
Q  218 atgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||  |||||||||||||||| ||||||  | ||||||||||| || |||||||||||||||    
T  4553059 atgtatcttattaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20900674 - 20900780
Alignment:
Q  179 ggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctctta 278  Q
    ||||| ||||||||||||  ||||||||| ||||||||||||||||| ||  ||| ||  | |||||||| |  | |||||||||||||| | ||||||     
T  20900674 ggttctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatacgtcaatttttgttgacctaactatctcttg 20900773  T
Q  279 taaatag 285  Q
    |||||||    
T  20900774 taaatag 20900780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 31150733 - 31150667
Alignment:
Q  219 tgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||||||||||| | |||| ||||||  ||||||||||||  || ||||||||||||||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaatag 31150667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 41492952 - 41492894
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||||||||||||||||||| || ||||| ||||||    
T  41492952 agatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 3055563 - 3055691
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  3055563 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 3055662  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || ||||| |||||||    
T  3055663 tcttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 15243991 - 15244089
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaat 283  Q
    ||||||||||||  ||||  |||||||||||||||||||||||| ||||  || ||| |||||||||| ||||||||| ||| |||  ||||||||||||    
T  15243991 atttataagagatatttgaatcaacaaaagttgatgtatctagtctaaattttgaat-cagatacattaacttttgtt-acccaaacatctcttataaat 15244088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 30852648 - 30852748
Alignment:
Q  200 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||| ||||||||||| ||||||||  || || ||||| || ||||||||  |||||| || | |||| |||||||||||||||| || ||||| ||||    
T  30852648 ttgggacaacaaaagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagta 30852747  T
Q  300 t 300  Q
    |    
T  30852748 t 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 15258821 - 15258904
Alignment:
Q  199 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaa 282  Q
    |||| |||||||||| ||||||||||||||  ||| ||  | ||||| ||||| ||||||||||||| |||  |||||||||||    
T  15258821 tttgagtcaacaaaaattgatgtatctagtctaaattttgaaccagacacattaacttttgttgacccaaacatctcttataaa 15258904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 41478764 - 41478637
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  41478764 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 41478665  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  41478664 tcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 6648575 - 6648517
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  6648575 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 9047811 - 9047753
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  9047811 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 27280050 - 27279968
Alignment:
Q  203 ggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||||||| |||||||| |||||||  | |  ||||||||||  |||||| |||||| |||| |||| |||||||||    
T  27280050 ggtcaacaaaagttaatgtatctggttaaaacattagaccagatacatcaacttttcttgacccaaatgtctcctataaatag 27279968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 44398691 - 44398817
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  44398691 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 44398790  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  44398791 tcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 13197835 - 13197710
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  13197835 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 13197736  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  13197735 tcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 15896847 - 15896972
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  15896847 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 15896946  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  15896947 tcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 38917578 - 38917521
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  38917578 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 12337993 - 12337937
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  12337993 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 15372300 - 15372356
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 23227356 - 23227404
Alignment:
Q  253 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||||||| |||| |||||||||||||| |||| ||| ||||||    
T  23227356 acttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 27159363 - 27159490
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  27159363 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 27159462  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  27159463 tcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 44668098 - 44668225
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  44668098 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44668197  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  44668198 tcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 9981772 - 9981646
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9981772 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 9981673  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  9981672 tcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 34042821 - 34042695
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  34042821 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttc 34042722  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || |||||||||||    
T  34042721 tcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 31842800 - 31842925
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  31842800 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 31842899  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  31842900 tcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 39401971 - 39402096
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  39401971 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 39402070  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  39402071 tcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 47216704 - 47216829
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  47216704 cctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 47216803  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  47216804 tcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 11796058 - 11795930
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  11796058 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttc 11795959  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || |||||||||||||    
T  11795958 tcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 14984962 - 14984834
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  14984962 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 14984863  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| || |||| ||||||||    
T  14984862 tcttataaataggaccggagatagtattt 14984834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 26471070 - 26471197
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  26471070 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 26471169  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  26471170 tcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 174 - 306
Target Start/End: Complemental strand, 1051013 - 1050881
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  1051013 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttc 1050914  T
Q  274 tcttataaatagcactggaggtagtattttatt 306  Q
    |||||||||||| || |||||||||| ||||||    
T  1050913 tcttataaataggaccggaggtagtaatttatt 1050881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 47777486 - 47777611
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  47777486 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttc 47777585  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || || |||||||    
T  47777586 tcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 44955212 - 44955336
Alignment:
Q  175 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttct 274  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  275 cttataaatagcactggaggtagta 299  Q
    ||||||||||| || ||||||||||    
T  44955312 cttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 12483633 - 12483760
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || | |||||||||||||||||||||||||||||    
T  12483633 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttc 12483732  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  12483733 tcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 25694444 - 25694333
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  25694444 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttc 25694345  T
Q  274 tcttataaatag 285  Q
    ||||||||||||    
T  25694344 tcttataaatag 25694333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 23278021 - 23278131
Alignment:
Q  189 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcac 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||    
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 23278120  T
Q  289 tggaggtagta 299  Q
     ||||||||||    
T  23278121 cggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 47588353 - 47588469
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  47588353 atttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 47588452  T
Q  285 gcactggaggtagtatt 301  Q
      ||  |||||||||||    
T  47588453 agaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 11897179 - 11897053
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||  |||||||||||| | |||||||||  |||||||||||||||| ||||    
T  11897179 cctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttc 11897080  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  11897079 tcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 17556878 - 17556766
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagataca-ttcacttttgttgacctaaattt 272  Q
    |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||| |||    
T  17556878 cctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaacttt 17556779  T
Q  273 ctcttataaatag 285  Q
    |||||||||||||    
T  17556778 ctcttataaatag 17556766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 47969820 - 47969708
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||| | |||||||| |||||||||||||||||||||||||||||||||| || | ||||||| |||||||||||||||||||||    
T  47969820 cctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttc 47969721  T
Q  274 tc-ttataaatag 285  Q
    || ||||||||||    
T  47969720 tctttataaatag 47969708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 16448124 - 16448239
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||| | |||| ||||||||||||||||| |||||||| ||| |||||||| |||||||||||  ||||||||||||| || |||||||||||||||    
T  16448124 atttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaata 16448223  T
Q  285 gcactggaggtagtat 300  Q
    | || ||||| |||||    
T  16448224 ggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 12213490 - 12213605
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||| ||||||  |||||||||||||| ||||| ||| ||||||||||||||||| | ||||||| | ||||||||||||||  ||||||||||||||    
T  12213490 atttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaata 12213589  T
Q  285 gcactggaggtagtat 300  Q
      |||||||| |||||    
T  12213590 agactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 37552255 - 37552141
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||| ||||||||||||||| |  |||||||| |||||||||||| |||||||||||  ||| ||||||||  || ||| |||||||||||    
T  37552255 atttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaata 37552156  T
Q  285 gcactggaggtagta 299  Q
    | || ||||| ||||    
T  37552155 ggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 11989906 - 11989796
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||| |||| |||| ||||| |||| ||||||||| | |||||||||||| |||| ||| |||   ||||||||||| || ||||    
T  11989906 cctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttc 11989807  T
Q  274 tcttataaata 284  Q
    |||||||||||    
T  11989806 tcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 11897059 - 11897187
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct-agttaaaaattcaatccagatacattcacttttgttgacctaaattt 272  Q
    |||||||| | |||||||||||||  || ||||||||||||||||||||||| |  | ||  || || || |||||||  ||||||||||||| ||||||    
T  11897059 cctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaa-ccggatacatcaacttttgttgacccaaattt 11897157  T
Q  273 ctcttataaatagcactggaggtagtattt 302  Q
    ||||||||||||| || ||||| |||||||    
T  11897158 ctcttataaataggaccggagggagtattt 11897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 37552213 - 37552257
Alignment:
Q  241 ccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  37552213 ccagatacattcatttttgttgacccaaatttctcttataaatag 37552257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 16448233 - 16448182
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 225  Q
    |||||||| | |||||||||||||  ||||||||||||||||||||||||||    
T  16448233 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 285
Target Start/End: Complemental strand, 12043726 - 12043618
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||||| | |||||||||| || |||   ||||||||| || |||||||| |||||||||| |||| | ||||||  |||||||||||| ||||| |||     
T  12043726 tccggtcctatttataagaaaaatttaaatcaacaaaaattaatgtatcttgttaaaaattgaatcaa-atacatcaacttttgttgacttaaatatctt 12043628  T
Q  276 ttataaatag 285  Q
    ||||||||||    
T  12043627 ttataaatag 12043618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 12062673 - 12062574
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||| |||   ||||||||| || ||||||||  ||||||||| ||| |||||||||  ||||||||||| | |||| ||| |||||||||    
T  12062673 atttataagagaaatttaaatcaacaaaaattaatgtatctgattaaaaattgaat-cagatacatcaacttttgttgatcaaaatatcttttataaata 12062575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 12062596 - 12062675
Alignment:
Q  205 tcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||||||||||||||  || ||  || ||| |||||||||| | |||||||||  ||||||||||||||||||||    
T  12062596 tcaacaaaagttgatgtatctgattcaatttttaat-cagatacattaatttttgttgatttaaatttctcttataaatag 12062675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 12483753 - 12483626
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| |||    || ||  | | | ||||||  ||||||||||||| ||| |||    
T  12483753 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaattc 12483654  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  12483653 tcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 34042770 - 34042829
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtattt 302  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  34042770 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 14984911 - 14984969
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  14984911 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 44955262 - 44955220
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    ||||||||  ||||||||||||||||| |||||||||||||||    
T  44955262 agatacatcaacttttgttgacctaaaattctcttataaatag 44955220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 47216824 - 47216698
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  47216824 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 47216725  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  47216724 tcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 17556827 - 17556884
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| || |||||||||||||||| || ||||| |||||    
T  17556827 agatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 25694393 - 25694450
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  25694393 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 27159483 - 27159358
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  27159483 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 27159384  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  27159383 tcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 31842920 - 31842795
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  31842920 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 31842821  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  31842820 tcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 39402091 - 39401966
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  39402091 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 39401992  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  39401991 tcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 44668218 - 44668093
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  44668218 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 44668119  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||| ||||    
T  44668118 tcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 571621 - 571542
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacc 265  Q
    ||||||| |||||| || | |||||||||||| ||||| |||||| |||||||| || | ||||| | |||||||||||||    
T  571621 atttataggagaatatttgatcaacaaaagttaatgtacctagttcaaaattcagtctaaataca-taacttttgttgacc 571542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 1050962 - 1051022
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatttt 303  Q
    ||||||||  ||||| ||||||| ||| ||||||||||||||| || ||||| ||||||||    
T  1050962 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatttt 1051022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 11796007 - 11796063
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  11796007 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 21537904 - 21537984
Alignment:
Q  204 gtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||| |||||||||||||||  || ||| || | | |||||||||  ||||||||||||  || |||||||||||||||    
T  21537904 gtcaacgaaagttgatgtatctgattcaaattttagttcagatacatcaacttttgttgactcaattttctcttataaata 21537984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 21537983 - 21537943
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatct 225  Q
    |||||||||||||  ||| ||||||||||||||||||||||    
T  21537983 atttataagagaaaattgagtcaacaaaagttgatgtatct 21537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 30800524 - 30800460
Alignment:
Q  200 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgac 264  Q
    |||||| |||||||||||||||||||  || |||||||| |  ||||||||  ||||||||||||    
T  30800524 ttgggttaacaaaagttgatgtatctgattcaaaattcagtatagatacatcaacttttgttgac 30800460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 47777537 - 47777481
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  47777537 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 49630 - 49500
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  49630 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 49531  T
Q  274 tcttataaatagcactggaggtagtatttta 304  Q
    |||||||||||| || |||||||||||||||    
T  49530 tcttataaataggaccggaggtagtatttta 49500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 9395475 - 9395350
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9395475 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 9395376  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  9395375 tcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 36563543 - 36563671
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  36563543 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 36563642  T
Q  274 tcttataaatagcactggaggtagtattt 302  Q
    |||||||||||| |  |||||||||||||    
T  36563643 tcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 37148960 - 37149087
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  37148960 cctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 37149059  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  37149060 tcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 23360067 - 23359941
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23360067 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 23359968  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| ||  ||||||||||    
T  23359967 tcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 41989412 - 41989538
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  41989412 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 41989511  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    ||||| |||||| || |||||||||||    
T  41989512 tcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 11795282 - 11795168
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  11795282 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 11795183  T
Q  285 gcactggaggtagta 299  Q
    | |  ||||||||||    
T  11795182 ggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 13103149 - 13103023
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  13103149 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 13103050  T
Q  274 tcttataaatagcactggaggtagtat 300  Q
    |||||||||||| || ||||| |||||    
T  13103049 tcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 17025749 - 17025619
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||| ||||||||||||    
T  17025749 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttc 17025650  T
Q  274 tcttataaatagcactggaggtagtatttta 304  Q
    |||||||||||| || |||||||||||||||    
T  17025649 tcttataaataggaccggaggtagtatttta 17025619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 42 - 174
Target Start/End: Original strand, 28000129 - 28000261
Alignment:
Q  42 ggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 141  Q
    ||||||||| ||||||||   ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  28000129 ggccatggagttgaagaaaaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgtttaaacaa 28000228  T
Q  142 aattagatagaatgatattgttctctgcaatgc 174  Q
    |||||||||  ||||||||||| ||||||||||    
T  28000229 aattagatattatgatattgttttctgcaatgc 28000261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 185 - 300
Target Start/End: Complemental strand, 13033165 - 13033050
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  13033165 atttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 13033066  T
Q  285 gcactggaggtagtat 300  Q
    | || ||||| |||||    
T  13033065 ggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 583099 - 582987
Alignment:
Q  189 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcac 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| ||    
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggac 583000  T
Q  289 tggaggtagtatt 301  Q
     ||||||||||||    
T  582999 cggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 37642079 - 37641951
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcac-ttttgttgacctaaattt 272  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||||||    
T  37642079 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaattt 37641980  T
Q  273 ctcttataaatagcactggaggtagtatt 301  Q
    ||||||||||||| || ||||||||||||    
T  37641979 ctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 20848198 - 20848072
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  20848198 cctccggtcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttc 20848100  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  20848099 tcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 4444074 - 4443955
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  4444074 atttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaata 4443975  T
Q  285 gcactggaggtagtatttta 304  Q
    | || | ||| |||||||||    
T  4443974 ggaccgaaggaagtatttta 4443955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 26350355 - 26350466
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||| |||||||||  |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  26350355 cctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 26350454  T
Q  274 tcttataaatag 285  Q
    ||||||||||||    
T  26350455 tcttataaatag 26350466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 21576071 - 21575970
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  21576071 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttc 21575972  T
Q  274 tc 275  Q
    ||    
T  21575971 tc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 6126949 - 6126845
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||| |||||||||    
T  6126949 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttc 6126850  T
Q  274 tctta 278  Q
    |||||    
T  6126849 tctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 38361743 - 38361807
Alignment:
Q  221 tatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||| ||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaatag 38361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 13539909 - 13539979
Alignment:
Q  211 aaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatag 285  Q
    |||||||||||||||||||||||||||| ||    || ||| | |||||||||||||||||||||||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtc----taaatttatttttgttgacctaaatttctcttataaatag 13539979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 3549553 - 3549663
Alignment:
Q  175 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttct 274  Q
    ||||||| | ||||||||||||| |||   | |||||||||||||||||   |||||||||| |  ||||||||||| | ||||||||||  |||| |||    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatct 3549652  T
Q  275 cttataaatag 285  Q
    |||||||||||    
T  3549653 cttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 966220 - 966273
Alignment:
Q  241 ccagatacattcacttttgttgacctaaatttctcttataaatagcactggagg 294  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  966220 ccagatacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 36595790 - 36595886
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  || ||||||||||| |||||||||||  ||||||||||| || |||||||||   ||||||||| | ||  ||||||||||||||    
T  36595790 atttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaata 36595886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 966262 - 966162
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    ||||||||||||| ||||| ||||||||| |  |||||||| |||||||||||| || ||||||||  ||| |||||||   || |||||||| ||||||    
T  966262 atttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacatgaactgttgttgattcaactttctcttgtaaata 966163  T
Q  285 g 285  Q
    |    
T  966162 g 966162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 2629561 - 2629657
Alignment:
Q  186 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaa 282  Q
    ||||||||| |  |||| ||||| |||| ||||||||| |||||||||| | |   |||||||||| |||||||||||||||||| | |||||||||    
T  2629561 tttataagaaacatttgagtcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaa 2629657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 39290868 - 39290792
Alignment:
Q  205 tcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataa 281  Q
    |||||||||||| ||||||||| ||||||||| |||||| ||||||  | |||||||||||| |  |||||||||||    
T  39290868 tcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttataa 39290792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 2366345 - 2366444
Alignment:
Q  176 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctc 275  Q
    |||| ||| ||||||||||||| ||||||||||||| |||| |||||| | ||||||| |||| |||| ||||||  |||||| || ||| || ||||||    
T  2366345 tccgattctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttctc 2366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 9006898 - 9006949
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 236  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||| ||||||    
T  9006898 atttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 24103073 - 24103002
Alignment:
Q  70 gagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 141  Q
    |||||||| ||| | ||||||| ||||||||||||||| |||||||| |||||||| ||  |||||||||||    
T  24103073 gagaacacaagatctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 24103002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 11795242 - 11795299
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  11795242 agatacatcaacttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 41989463 - 41989398
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtattttattgc 308  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||||| ||||    
T  41989463 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattttgttgc 41989398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 18167438 - 18167334
Alignment:
Q  180 gttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttat 279  Q
    |||| |||||||||| ||  || ||||||||||| |||| |||| |  ||||||||| |||||| ||||||  | ||||||||| |||| ||||||||||    
T  18167438 gttctatttataagaaaaagtttggtcaacaaaaattgacgtatttgattaaaaattaaatccatatacatcaatttttgttgatctaactttctcttat 18167339  T
Q  280 aaata 284  Q
     ||||    
T  18167338 taata 18167334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 23360016 - 23360072
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||||||||    
T  23360016 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 9395355 - 9395482
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||    
T  9395355 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 9395454  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||| ||||||    
T  9395455 tcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 13103098 - 13103156
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  13103098 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 17025698 - 17025755
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  17025698 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 36563594 - 36563537
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  36563594 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 6126898 - 6126954
Alignment:
Q  243 agatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 299  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  6126898 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

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Target: scaffold0482 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 12985 - 12858
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  12985 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 12886  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  12885 tcttataaataggaccggaggtagtatt 12858  T

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Target: scaffold0204 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 23910 - 23783
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23910 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 23811  T
Q  274 tcttataaatagcactggaggtagtatt 301  Q
    |||||||||||| || ||||||||||||    
T  23810 tcttataaataggaccggaggtagtatt 23783  T

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Target: scaffold1707 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 185 - 306
Target Start/End: Complemental strand, 1449 - 1328
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  1449 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 1350  T
Q  285 gcactggaggtagtattttatt 306  Q
    | || ||| ||||||| |||||    
T  1349 ggaccggatgtagtatgttatt 1328  T

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Target: scaffold0464 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 6136 - 6261
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6136 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttc 6235  T
Q  274 tcttataaatagcactggaggtagta 299  Q
    |||||||||||| || ||||||||||    
T  6236 tcttataaataggaccggaggtagta 6261  T

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Target: scaffold0288 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 3727 - 3848
Alignment:
Q  20 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 119  Q
    |||||||||| |||||  ||| |||| |||| || ||||||  ||| |||||||||||||||||||||||| |||||||||||||| | |||||||| ||    
T  3727 aaggaaagaagatgaggcaaaaggccgtggagttaaagaagaaggcagaggagaacactagaccaggtggtcgttcatacatgaacctggacaaagttat 3826  T
Q  120 taaggaagtgttgcttaaacaa 141  Q
    |||||| || ||||||||||||    
T  3827 taaggaggttttgcttaaacaa 3848  T

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Target: scaffold0477 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 4688 - 4815
Alignment:
Q  14 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 113  Q
    ||||| |||||| ||| |||||  ||| ||||||||| |||||||||  ||| ||||||||||| ||  | ||||| ||||||||||||||||| |||||    
T  4688 gagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagttctggtggctgttcatacatgaacttggacaa 4787  T
Q  114 agtgattaaggaagtgttgcttaaacaa 141  Q
    |||||||||||| ||  |||||||||||    
T  4788 agtgattaaggaggtcatgcttaaacaa 4815  T

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Target: scaffold0011 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 231308 - 231415
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttc 273  Q
    |||||||| | ||||||| |||||| || ||||||||||||||||| || |||||| |||||||| |||||||||||  ||||||||||| | || ||||    
T  231308 cctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttc 231407  T
Q  274 tcttataa 281  Q
    ||||||||    
T  231408 tcttataa 231415  T

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Target: scaffold0650 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 305
Target Start/End: Original strand, 1 - 120
Alignment:
Q  185 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaata 284  Q
    |||||||||||||  | | |||||||||||||||||||| | |||||||||| | |||| ||||||  ||||||||||||| |  |||||| ||||||||    
T  1 atttataagagaaagtcgagtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaata 99  T
Q  285 gcactggaggtagtattttat 305  Q
    | || ||||| ||||| ||||    
T  100 gaaccggagggagtatattat 120  T

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Target: scaffold0415 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 13761 - 13857
Alignment:
Q  205 tcaacaaaagtt--gatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 300  Q
    ||||||||||||  ||||||| |||||||||||||| | || ||| ||| | ||||||||||||||||||||||||||| ||| |||| ||| |||||    
T  13761 tcaacaaaagttttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggactgaagggagtat 13857  T

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Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 53379 - 53471
Alignment:
Q  207 aacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 301  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||  || |||||||||||||  ||| | |||||||||| |||||||| ||||||    
T  53379 aacaaaagttgatgtatctcgttaaaaattaaattcagataca-acaattttgttgacctaccttt-ttttataaataggactggagggagtatt 53471  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 312843 - 312747
Alignment:
Q  174 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccagatacattcacttttgttgacctaaat 270  Q
    |||||||||  ||||| |||||| |||| | ||||||||| ||||||||||||||| ||||||     |||||||||| ||||||||||||| ||||    
T  312843 cctccggttttatttaaaagagactttttgatcaacaaaaattgatgtatctagtttaaaatttggatcagatacattaacttttgttgaccaaaat 312747  T

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