View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5962_low_8 (Length: 466)

Name: NF5962_low_8
Description: NF5962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5962_low_8
NF5962_low_8
[»] chr3 (44 HSPs)
chr3 (240-429)||(18014911-18015099)
chr3 (174-350)||(19349941-19350117)
chr3 (348-454)||(19350329-19350435)
chr3 (10-158)||(19349755-19349903)
chr3 (177-234)||(18014614-18014671)
chr3 (68-143)||(40272831-40272906)
chr3 (65-143)||(6411841-6411919)
chr3 (39-159)||(18014471-18014590)
chr3 (65-141)||(22609825-22609901)
chr3 (204-286)||(14897537-14897619)
chr3 (76-143)||(54484762-54484829)
chr3 (82-143)||(25517189-25517250)
chr3 (65-142)||(26869766-26869843)
chr3 (65-133)||(47624101-47624169)
chr3 (69-140)||(34771386-34771457)
chr3 (68-143)||(45948857-45948932)
chr3 (68-144)||(46421053-46421131)
chr3 (77-143)||(52926238-52926304)
chr3 (68-141)||(12914056-12914129)
chr3 (68-141)||(16735503-16735576)
chr3 (74-143)||(13628809-13628880)
chr3 (68-143)||(54374364-54374440)
chr3 (69-140)||(1217152-1217223)
chr3 (69-140)||(15797284-15797355)
chr3 (69-140)||(22122939-22123010)
chr3 (68-143)||(26573190-26573265)
chr3 (69-140)||(31592911-31592982)
chr3 (68-143)||(29366739-29366816)
chr3 (69-143)||(39203578-39203652)
chr3 (87-140)||(24577917-24577970)
chr3 (99-143)||(24851320-24851364)
chr3 (68-143)||(7943053-7943128)
chr3 (68-144)||(8247705-8247783)
chr3 (68-143)||(9276327-9276401)
chr3 (68-143)||(353368-353445)
chr3 (74-141)||(10795444-10795513)
chr3 (68-143)||(45786233-45786310)
chr3 (83-143)||(31904875-31904936)
chr3 (99-143)||(516506-516550)
chr3 (68-112)||(4495714-4495758)
chr3 (103-139)||(10696236-10696272)
chr3 (99-143)||(25944564-25944608)
chr3 (68-143)||(34420662-34420738)
chr3 (68-143)||(53996584-53996660)
[»] chr1 (43 HSPs)
chr1 (65-143)||(27474341-27474419)
chr1 (68-143)||(4349702-4349777)
chr1 (68-143)||(23768339-23768414)
chr1 (74-144)||(43768209-43768279)
chr1 (65-141)||(32632578-32632654)
chr1 (83-143)||(45402175-45402235)
chr1 (69-140)||(34725120-34725191)
chr1 (68-143)||(46247972-46248047)
chr1 (65-142)||(11596573-11596650)
chr1 (68-143)||(6925164-6925239)
chr1 (63-118)||(21910693-21910748)
chr1 (69-140)||(35253209-35253280)
chr1 (69-140)||(47214574-47214645)
chr1 (68-143)||(18741976-18742053)
chr1 (68-159)||(18944707-18944800)
chr1 (65-143)||(31382233-31382311)
chr1 (76-142)||(44485129-44485195)
chr1 (74-142)||(15505634-15505702)
chr1 (65-140)||(25468285-25468361)
chr1 (69-140)||(12126859-12126930)
chr1 (69-140)||(45812559-45812630)
chr1 (68-143)||(46991868-46991943)
chr1 (74-131)||(6358191-6358249)
chr1 (69-143)||(10378754-10378828)
chr1 (82-143)||(1517330-1517391)
chr1 (102-143)||(33594150-33594191)
chr1 (74-143)||(27201717-27201788)
chr1 (84-143)||(14617118-14617177)
chr1 (68-143)||(18335307-18335382)
chr1 (69-140)||(19414502-19414573)
chr1 (84-143)||(23796545-23796604)
chr1 (69-140)||(38478304-38478375)
chr1 (68-131)||(19932784-19932849)
chr1 (76-143)||(20004109-20004178)
chr1 (68-143)||(30395745-30395822)
chr1 (68-143)||(35005187-35005264)
chr1 (68-118)||(41319850-41319900)
chr1 (68-143)||(42304226-42304303)
chr1 (82-143)||(4430018-4430079)
chr1 (99-143)||(19701666-19701710)
chr1 (69-117)||(34149005-34149053)
chr1 (99-143)||(45264418-45264462)
chr1 (99-143)||(50606498-50606542)
[»] chr7 (33 HSPs)
chr7 (65-142)||(18512473-18512550)
chr7 (60-143)||(34626227-34626310)
chr7 (65-144)||(38604564-38604643)
chr7 (65-143)||(33871929-33872007)
chr7 (76-141)||(7879687-7879752)
chr7 (82-142)||(27889336-27889396)
chr7 (68-143)||(2541038-2541113)
chr7 (69-140)||(10693095-10693166)
chr7 (69-140)||(21172031-21172102)
chr7 (69-140)||(42391122-42391193)
chr7 (68-121)||(8148986-8149039)
chr7 (65-118)||(19265852-19265905)
chr7 (68-141)||(19266491-19266564)
chr7 (65-141)||(40463914-40463990)
chr7 (76-140)||(48735144-48735208)
chr7 (69-140)||(11741835-11741906)
chr7 (69-140)||(32758301-32758372)
chr7 (69-140)||(47077877-47077948)
chr7 (76-142)||(28362165-28362231)
chr7 (65-141)||(35787290-35787366)
chr7 (76-140)||(42798718-42798782)
chr7 (69-112)||(2662985-2663028)
chr7 (68-131)||(11617619-11617682)
chr7 (75-142)||(13805149-13805216)
chr7 (68-143)||(23419693-23419768)
chr7 (77-140)||(31591131-31591194)
chr7 (68-143)||(35334835-35334910)
chr7 (74-143)||(18747534-18747603)
chr7 (65-118)||(22065625-22065678)
chr7 (68-145)||(28078149-28078226)
chr7 (76-117)||(42476920-42476961)
chr7 (68-142)||(47716500-47716576)
chr7 (68-112)||(19426939-19426983)
[»] chr8 (31 HSPs)
chr8 (65-141)||(13160739-13160815)
chr8 (65-141)||(45071302-45071378)
chr8 (68-143)||(8897783-8897858)
chr8 (68-143)||(28817645-28817720)
chr8 (68-143)||(29521704-29521779)
chr8 (68-139)||(29877135-29877206)
chr8 (68-143)||(36720837-36720912)
chr8 (68-143)||(44530190-44530265)
chr8 (68-143)||(8483957-8484032)
chr8 (69-140)||(12670272-12670343)
chr8 (69-140)||(19729382-19729453)
chr8 (68-143)||(35261720-35261795)
chr8 (68-142)||(5135309-5135383)
chr8 (68-141)||(2626563-2626636)
chr8 (74-142)||(24365079-24365147)
chr8 (68-143)||(12625931-12626006)
chr8 (65-140)||(31457210-31457285)
chr8 (68-143)||(20284088-20284165)
chr8 (68-143)||(21070716-21070793)
chr8 (76-140)||(30454119-30454183)
chr8 (69-112)||(23286375-23286418)
chr8 (84-143)||(16013511-16013572)
chr8 (68-143)||(26954174-26954251)
chr8 (68-143)||(39461013-39461090)
chr8 (74-143)||(5689678-5689747)
chr8 (74-143)||(7136546-7136617)
chr8 (99-143)||(23574593-23574637)
chr8 (88-140)||(26102578-26102630)
chr8 (99-143)||(28407475-28407519)
chr8 (68-121)||(43942365-43942420)
chr8 (99-143)||(44781523-44781567)
[»] chr4 (46 HSPs)
chr4 (65-141)||(5648296-5648372)
chr4 (68-143)||(14983875-14983950)
chr4 (65-143)||(6430645-6430723)
chr4 (65-143)||(30639417-30639495)
chr4 (74-143)||(17043413-17043482)
chr4 (68-143)||(20639677-20639753)
chr4 (65-141)||(40915866-40915942)
chr4 (69-140)||(20225024-20225095)
chr4 (68-143)||(25629090-25629165)
chr4 (69-140)||(29207920-29207991)
chr4 (68-143)||(30690195-30690270)
chr4 (76-143)||(51865057-51865124)
chr4 (68-143)||(21647005-21647082)
chr4 (68-141)||(47443998-47444071)
chr4 (76-141)||(49796846-49796911)
chr4 (65-136)||(7909307-7909378)
chr4 (68-143)||(19027889-19027964)
chr4 (65-131)||(5306695-5306761)
chr4 (69-127)||(9832348-9832406)
chr4 (65-131)||(41018825-41018891)
chr4 (101-143)||(44718641-44718683)
chr4 (71-144)||(9987852-9987925)
chr4 (69-138)||(10277781-10277850)
chr4 (99-140)||(28494223-28494264)
chr4 (77-143)||(30352599-30352667)
chr4 (69-118)||(47528574-47528623)
chr4 (69-118)||(48598869-48598918)
chr4 (74-143)||(16911609-16911680)
chr4 (76-143)||(20908655-20908723)
chr4 (99-143)||(44363149-44363193)
chr4 (65-143)||(54175101-54175181)
chr4 (100-143)||(33836506-33836549)
chr4 (68-143)||(35567211-35567286)
chr4 (100-143)||(38755927-38755970)
chr4 (99-142)||(47482870-47482913)
chr4 (68-143)||(23501828-23501905)
chr4 (84-142)||(25463179-25463237)
chr4 (68-121)||(12711490-12711543)
chr4 (69-143)||(16494259-16494335)
chr4 (74-143)||(55766485-55766554)
chr4 (74-143)||(55830740-55830809)
chr4 (74-118)||(8473666-8473710)
chr4 (99-143)||(11394924-11394968)
chr4 (99-143)||(11404651-11404695)
chr4 (74-143)||(20225121-20225192)
chr4 (99-143)||(49938612-49938656)
[»] scaffold0057 (3 HSPs)
scaffold0057 (68-143)||(46872-46947)
scaffold0057 (68-143)||(24791-24866)
scaffold0057 (99-144)||(46725-46770)
[»] chr5 (23 HSPs)
chr5 (68-143)||(24448931-24449006)
chr5 (69-143)||(43574648-43574722)
chr5 (74-142)||(22600501-22600569)
chr5 (69-140)||(32703464-32703535)
chr5 (65-139)||(2838816-2838890)
chr5 (65-143)||(7097779-7097857)
chr5 (65-143)||(19142962-19143040)
chr5 (68-143)||(38879622-38879699)
chr5 (65-143)||(41014356-41014434)
chr5 (69-138)||(8170008-8170077)
chr5 (87-143)||(16957374-16957430)
chr5 (68-143)||(16880666-16880741)
chr5 (68-144)||(27328793-27328871)
chr5 (69-140)||(35710353-35710424)
chr5 (68-143)||(12006347-12006424)
chr5 (74-140)||(34154836-34154902)
chr5 (99-143)||(10306493-10306537)
chr5 (69-140)||(7368438-7368509)
chr5 (100-143)||(25622533-25622576)
chr5 (68-143)||(43334244-43334320)
chr5 (74-143)||(30006372-30006441)
chr5 (102-143)||(39801591-39801632)
chr5 (68-121)||(41425989-41426042)
[»] chr2 (36 HSPs)
chr2 (68-143)||(10546204-10546279)
chr2 (69-143)||(9671221-9671295)
chr2 (68-144)||(26684638-26684714)
chr2 (68-143)||(17896301-17896376)
chr2 (65-143)||(14444766-14444844)
chr2 (68-142)||(32781308-32781382)
chr2 (69-143)||(36871534-36871607)
chr2 (74-143)||(8455335-8455404)
chr2 (65-133)||(22371092-22371160)
chr2 (67-143)||(39499249-39499325)
chr2 (65-144)||(12023937-12024016)
chr2 (76-143)||(13245114-13245181)
chr2 (68-139)||(44643564-44643635)
chr2 (68-143)||(10543739-10543816)
chr2 (77-143)||(11514486-11514551)
chr2 (69-143)||(25641543-25641617)
chr2 (99-143)||(31158458-31158502)
chr2 (65-131)||(17623601-17623668)
chr2 (65-143)||(17668039-17668118)
chr2 (69-140)||(21779283-21779354)
chr2 (68-143)||(14530359-14530436)
chr2 (65-143)||(25249757-25249835)
chr2 (65-143)||(30826074-30826151)
chr2 (82-143)||(99284-99345)
chr2 (68-131)||(4516382-4516445)
chr2 (69-116)||(23397806-23397853)
chr2 (76-143)||(24890460-24890527)
chr2 (68-142)||(21377093-21377167)
chr2 (82-143)||(24860007-24860068)
chr2 (101-142)||(33795359-33795400)
chr2 (102-143)||(34766330-34766371)
chr2 (99-143)||(23488555-23488599)
chr2 (65-141)||(30864438-30864514)
chr2 (68-144)||(31821361-31821437)
chr2 (75-143)||(40762253-40762321)
chr2 (71-143)||(45235836-45235908)
[»] scaffold0258 (1 HSPs)
scaffold0258 (66-143)||(13043-13120)
[»] chr6 (13 HSPs)
chr6 (67-143)||(32579465-32579541)
chr6 (69-140)||(1347004-1347075)
chr6 (69-140)||(1354779-1354850)
chr6 (68-159)||(12221918-12222011)
chr6 (74-143)||(29355874-29355945)
chr6 (102-143)||(11395836-11395877)
chr6 (85-141)||(383781-383837)
chr6 (99-143)||(12885985-12886029)
chr6 (69-140)||(26097200-26097271)
chr6 (68-129)||(15866072-15866131)
chr6 (65-138)||(18254556-18254629)
chr6 (99-143)||(24097649-24097693)
chr6 (107-143)||(29016301-29016337)
[»] scaffold0311 (1 HSPs)
scaffold0311 (68-143)||(10851-10926)
[»] scaffold0015 (1 HSPs)
scaffold0015 (69-140)||(48656-48727)
[»] scaffold0180 (1 HSPs)
scaffold0180 (75-140)||(24155-24220)
[»] scaffold0168 (1 HSPs)
scaffold0168 (69-140)||(30619-30690)
[»] scaffold0049 (1 HSPs)
scaffold0049 (68-143)||(59018-59095)
[»] scaffold0018 (1 HSPs)
scaffold0018 (76-143)||(72886-72953)
[»] scaffold1176 (1 HSPs)
scaffold1176 (69-143)||(1606-1680)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-131)||(35048-35110)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 1e-88; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 240 - 429
Target Start/End: Original strand, 18014911 - 18015099
Alignment:
Q  240 tgacaactactgcaattatctgggtatcacatattgataattaatacaagaaacgttaatagatgcttgaaaactcctgataagtttcaattgtactctt 339  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18014911 tgacaactactgcaattatccgggtatcacatattgataattaatacaagaaacgttaatagatgcttgaaaactcctaataagtttcaattgtactctt 18015010  T
Q  340 tgtatcaaatatgaaatatcaatgatgatatgtccaaagtcttctttgcttttttataaagtcttgttgtttggagctgtcacaaatcta 429  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18015011 tgtatcaaatatgaaatatcaatggtgatatgtccaaagtcttctttgc-tttttctaaagtcttgttgtttggagctgtcacaaatcta 18015099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 174 - 350
Target Start/End: Original strand, 19349941 - 19350117
Alignment:
Q  174 atgaaatataattatttgtagttgtgttacaagttcaatcttgaaacttgaattaacaaaaagagatgacaactactgcaattatctgggtatcacatat 273  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||    
T  19349941 atgaaatataattatttgtagtggtgttacaagttcaatcttgaaacttgaattaacaaaagaagatgacaactactgcaattatccgagtatcacatat 19350040  T
Q  274 tgataattaatacaagaaacgttaatagatgcttgaaaactcctgataagtttcaattgtactctttgtatcaaata 350  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19350041 tgataattaatacaagaaacgttaatagatgcttgaaaactcctaataagtttcaattgtactctttgtatcaaata 19350117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 348 - 454
Target Start/End: Original strand, 19350329 - 19350435
Alignment:
Q  348 atatgaaatatcaatgatgatatgtccaaagtcttctttgcttttttataaagtcttgttgtttggagctgtcacaaatctagtcattcacaggagctat 447  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  19350329 atatgaaatatcaatggtgatatgtccaaagtcttctttgcttttttctaaaatcttgttgtttggagctgtcacaaatctactcattcacaggagctat 19350428  T
Q  448 tgttttt 454  Q
    | |||||    
T  19350429 ttttttt 19350435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 158
Target Start/End: Original strand, 19349755 - 19349903
Alignment:
Q  10 agatgaattgaaaattgctacagtattttttatagtctatgaaatataattcctatgtaaaaatagggtaaagctgcgtacaatagactaaatggtggga 109  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| | ||||||||||||    
T  19349755 agatgaattggaaattgctagagtaatttttatagtctatgaaatataattcctgtgtaaaaataggataaagttgcatacaatacattaaatggtggga 19349854  T
Q  110 ccccttcccagatcctgcgtatacgggagctttaaatacaccaggttgc 158  Q
    ||| ||  |  | |||||||||| ||||||||||||| ||||| |||||    
T  19349855 ccctttttcgaaccctgcgtatatgggagctttaaatgcaccaagttgc 19349903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 18014614 - 18014671
Alignment:
Q  177 aaatataattatttgtagttgtgttacaagttcaatcttgaaacttgaattaacaaaa 234  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18014614 aaatataattatttgtagtggtgttacaagttcaatcttgaaacttgaattaacaaaa 18014671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 40272906 - 40272831
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  40272906 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 40272831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 6411919 - 6411841
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| ||||||||||||| || ||||| ||||||||||||||||| | ||||||| |||||||||||    
T  6411919 tgtaaaaacagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccagaccttgcgtatgcgggagcttta 6411841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 18014471 - 18014590
Alignment:
Q  39 ttatagtctatgaaatataattcctatgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggag 138  Q
    |||||||  |||||||||||||||  ||||||||||||||||| ||||||| |||| |  |||||| |||| | ||||||  | |||| |||||||||||    
T  18014471 ttatagttaatgaaatataattccggtgtaaaaatagggtaaaactgcgtaaaatacatcaaatgg-gggatctcttcccgaaccctgtgtatacgggag 18014569  T
Q  139 ctttaaatacaccaggttgcc 159  Q
    |||||||| |||||| |||||    
T  18014570 ctttaaatgcaccagattgcc 18014590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 22609825 - 22609901
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||||||| || | ||||||| |||||||||    
T  22609825 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgcgggagctt 22609901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 14897619 - 14897537
Alignment:
Q  204 aagttcaatcttgaaacttgaattaacaaaaagagatgacaactactgcaattatctgggtat-cacatattgataattaatac 286  Q
    |||||||||| |||||||| |||||| |||| |||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  14897619 aagttcaatcatgaaacttaaattaataaaa-gagatgacaactactgtaattatctttgtatccacatattgataattaatac 14897537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 54484762 - 54484829
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  54484762 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 54484829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 25517250 - 25517189
Alignment:
Q  82 gctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||||| | |||||||||    
T  25517250 gctgcgtacaatacacaaaatggtgggaccccttcccggatcctgcgtatgctggagcttta 25517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 26869766 - 26869843
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    |||||||| ||||||| ||||||||||||| || ||||||||||||||||| || || | ||||||| ||||||||||    
T  26869766 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttgccggaccatgcgtatgcgggagcttt 26869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 47624101 - 47624169
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatac 133  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||||||| || |||| ||||||    
T  47624101 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgtgtatac 47624169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 34771457 - 34771386
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  34771457 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 34771386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 45948932 - 45948857
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| ||||| ||||||| || || ||||||||||||||| | || ||||||||| |||||||||||    
T  45948932 aaaaatagggtaaggctgcatacaatacaccaattggtgggaccccttctcggaccctgcgtatgcgggagcttta 45948857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 46421131 - 46421053
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| ||||||||||||    
T  46421131 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaa 46421053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 52926304 - 52926238
Alignment:
Q  77 gtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||||||||| || |||||||||||| ||||||| || ||||||||| |||||||||||    
T  52926304 gtaaggctgcgtacaatacaccaaatggtgggacaccttcccggaccctgcgtatgcgggagcttta 52926238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 12914129 - 12914056
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||| ||||||| || |||||||||| || |||||||| |||||||||||||| ||||| ||| |||||||||    
T  12914129 aaaaacagggtaaggcggcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgcgggagctt 12914056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 16735503 - 16735576
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||| ||  |||||||| ||| |||||    
T  16735503 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacactgcgtatgcggtagctt 16735576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 13628880 - 13628809
Alignment:
Q  74 agggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| |||||||||||    
T  13628880 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 13628809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 54374440 - 54374364
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa-tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| ||||||||||||  || ||| ||||||||||||||||| || ||||| ||| |||||||||||    
T  54374440 aaaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccggaccctgcatatgcgggagcttta 54374364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 1217152 - 1217223
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||| ||||||||||||| || ||||| ||| ||||||||    
T  1217152 aaaacagggtaaggctgcgtacaatacaccaaatggcgggaccccttcccggaccctgcatatgcgggagct 1217223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 15797284 - 15797355
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| |||  |||||||    
T  15797284 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgtgggagct 15797355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 22123010 - 22122939
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| || |||||    
T  22123010 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgagagct 22122939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 26573190 - 26573265
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || || |||||||||||| |||| || ||||||||| || ||||||||    
T  26573190 aaaaacagggtaaggctgcgtacaatacaccaattggtgggaccccatcccggaccctgcgtatgcgtgagcttta 26573265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 31592911 - 31592982
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||| ||||||| || ||||| ||| ||||||||    
T  31592911 aaaacagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgcgggagct 31592982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 29366816 - 29366739
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || |||||||||  ||||||||||    
T  29366816 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagcttta 29366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 39203578 - 39203652
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||| | ||||||||||| || |||||||||||||||||||| || | ||| ||| |||||||||||    
T  39203578 aaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccttgcatatgcgggagcttta 39203652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 24577917 - 24577970
Alignment:
Q  87 gtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||||||| |||||||||||||| || |||||||| ||||| ||||||||||||    
T  24577917 gtacaatacactaaatggtgggatcctttcccagaccctgcatatacgggagct 24577970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 24851364 - 24851320
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagcttta 24851320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 7943053 - 7943128
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||||||  |||||||||||| |  ||||||||||| ||||| ||||| | ||||||| |||||||||||    
T  7943053 aaaaacagggtaagactgcgtacaatacatcaaatggtgggatccctttccagaccatgcgtatgcgggagcttta 7943128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 8247783 - 8247705
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    ||||| ||||||| | ||||||||||| || ||  |||||||||| ||||||| || ||||||||| ||||||||||||    
T  8247783 aaaaacagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggagctttaa 8247705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 9276327 - 9276401
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||||||| |||||| ||||| || ||||||||| ||||| |||||    
T  9276327 aaaaacagggtaaggctgcgtacaatacaccaaatggt-ggaccctttcccggaccctgcgtatgcgggaacttta 9276401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 353445 - 353368
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || || || ||| |||||||||||    
T  353445 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 353368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 10795513 - 10795444
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||||| ||||||||||||| || |||  ||||||||||||||||  || ||||||||| |||||||||    
T  10795513 agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 10795444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 45786310 - 45786233
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||  ||||||||||||||||| || |||||| || | |||||||||    
T  45786310 aaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagcttta 45786233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 31904936 - 31904875
Alignment:
Q  83 ctgcgtacaatagactaaatggtggga-ccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||| || ||||||||||| |||||||||||||| | ||| | |||||||||||    
T  31904936 ctgcgtacaatacaccaaatggtgggacccccttcccagatcttacgtgtgcgggagcttta 31904875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 516506 - 516550
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||| ||||||||||||| || ||||||||| |||||||||||    
T  516506 aaatggcgggaccccttccccgaccctgcgtatgcgggagcttta 516550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 4495758 - 4495714
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccc 112  Q
    ||||| ||||||| ||||||||||||| || ||||||||||||||    
T  4495758 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 10696272 - 10696236
Alignment:
Q  103 ggtgggaccccttcccagatcctgcgtatacgggagc 139  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  10696272 ggtgggaccccttcccagaccctgcgtctacgggagc 10696236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 25944564 - 25944608
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| || |||||||||  ||||||||||    
T  25944564 aaatggtgggaccccttccctgaccctgcgtatgtgggagcttta 25944608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 34420738 - 34420662
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa-tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||| ||| || ||| ||||||||||||||||| || | |||||||  ||||||||||    
T  34420738 aaaaacagggtaaggctgcgtaccatacaccaaaatggtgggaccccttcccggaccttgcgtatgtgggagcttta 34420662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 53996660 - 53996584
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa-tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||| ||||||| || ||| ||||||||||||||||| ||  ||||||||  ||||||||||    
T  53996660 aaaaacagggtaaggctgcttacaatacaccaaaatggtgggaccccttccctgacactgcgtatgtgggagcttta 53996584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 27474341 - 27474419
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| |||| |||||||||||||||| ||| ||||||||||||||||||| || ||||||||| |||||||||||    
T  27474341 tgtaaaaacagggcaaagctgcgtacaatacactgaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 27474419  T

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Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 4349702 - 4349777
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  4349702 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 4349777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 23768414 - 23768339
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||||||||||| |||||||||| ||||||||| |||||||||||    
T  23768414 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggacaccttcccagaccctgcgtatgcgggagcttta 23768339  T

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Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 43768209 - 43768279
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    ||||||| ||||| ||||||| || || |||||||||||||||||||| ||||||||||||||||||||||    
T  43768209 agggtaaggctgcctacaatacaccaattggtgggaccccttcccagaccctgcgtatacgggagctttaa 43768279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 32632654 - 32632578
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||| ||||||| ||||||||||||| || ||||||||||||||||||||| | ||||| ||| |||||||||    
T  32632654 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaaccctgcatatgcgggagctt 32632578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 45402175 - 45402235
Alignment:
Q  83 ctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||    
T  45402175 ctgcgtacaatacaccaaatggtgggaccccttcccagaccctgcgtatgcgggagcttta 45402235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 34725191 - 34725120
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| ||| ||||||||    
T  34725191 aaaacagggtaaggctgcgtacaatacactaaatggtgggaccccttcccggaccctgcatatgcgggagct 34725120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 46248047 - 46247972
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||||||  |||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  46248047 aaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 46247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 11596573 - 11596650
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    |||||||| ||||||| |||||||| |||| || |||||||||||||||||||  || ||||||||| ||||||||||    
T  11596573 tgtaaaaacagggtaaggctgcgtataatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttt 11596650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 6925164 - 6925239
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| |||||| |||||| ||  ||||||||||||||||||| |  ||||||||| |||||||||||    
T  6925164 aaaaatagggtaaggctgcggacaatacaccgaatggtgggaccccttcccggtccctgcgtatgcgggagcttta 6925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 21910748 - 21910693
Alignment:
Q  63 tatgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttccc 118  Q
    |||||||||||||||||| | ||||||||||| || ||||||||||||||||||||    
T  21910748 tatgtaaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttccc 21910693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 35253280 - 35253209
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  35253280 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 35253209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 47214574 - 47214645
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| | ||||||||||| || ||||||||||||||||||||||| ||||| ||| ||||||||    
T  47214574 aaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccagaccctgcatatgcgggagct 47214645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 18742053 - 18741976
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||  |||||||||||||||||||| ||||||||| || ||||||||    
T  18742053 aaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagcttta 18741976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 18944707 - 18944800
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagctttaaatacaccaggttgcc 159  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| |||||||||| | | |||| |||||||    
T  18944707 aaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgcc 18944800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 31382311 - 31382233
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||| ||| ||||||||||||| || |||||||||||||||||||  || ||||| ||| |||||||||||    
T  31382311 tgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcatatgcgggagcttta 31382233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 44485195 - 44485129
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||| ||||||||||||| || ||||||| |||||||||||| |||||| ||||| ||||||||||    
T  44485195 ggtaaggctgcgtacaatacaccaaatggttggaccccttcccggatcctacgtatgcgggagcttt 44485129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 15505634 - 15505702
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    |||||||  |||||||||||| || ||||||||||||||||||||  | ||||||||| ||||||||||    
T  15505634 agggtaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 25468361 - 25468285
Alignment:
Q  65 tgtaaaaat-agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||||||| ||||||| | ||||||||||| || ||||||| ||||| ||||||||| ||||||||| ||||||||    
T  25468361 tgtaaaaatcagggtaaggttgcgtacaatacaccaaatggttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 12126930 - 12126859
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||| ||||||||||||||| || ||||| ||| ||||||||    
T  12126930 aaaacagggtaaggctgcgtacaatacaccaaattgtgggaccccttcccggaccctgcatatgcgggagct 12126859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 45812630 - 45812559
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||| ||||||| || ||||||||||||||||||||| | ||||| ||| ||||||||    
T  45812630 aaaagagggtaaggctgcatacaatacaccaaatggtgggaccccttcccaaaccctgcatatgcgggagct 45812559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 46991868 - 46991943
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| |||| |||||||| ||  ||||||||||||||||||| || |||||||||  ||||||||||    
T  46991868 aaaaacagggtaaggctgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgtgggagcttta 46991943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 6358191 - 6358249
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaa-tggtgggaccccttcccagatcctgcgtat 131  Q
    ||||||||||||||||||| | || ||| |||||||||||||||||||| |||||||||    
T  6358191 agggtaaagctgcgtacaaaacaccaaaatggtgggaccccttcccagaccctgcgtat 6358249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 10378828 - 10378754
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||| ||||||||||||| || ||||||||||||||||||   || ||||| ||| |||||||||||    
T  10378828 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcttggaccctgcatatgcgggagcttta 10378754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 1517391 - 1517330
Alignment:
Q  82 gctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| || || ||||||||||||||| |||| ||||||||| | |||||||||    
T  1517391 gctgcgtacaatacaccaattggtgggaccccttctcagaccctgcgtatgcaggagcttta 1517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 33594191 - 33594150
Alignment:
Q  102 tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagcttta 33594150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 27201717 - 27201788
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || |||  ||||||||||||||||| || | ||||||| |||||||||||    
T  27201717 agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagcttta 27201788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 14617118 - 14617177
Alignment:
Q  84 tgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||| || ||||||||||| |||||||| || ||||| ||| |||||||||||    
T  14617118 tgcgtacaatacaccaaatggtgggatcccttcccggaccctgcatatgcgggagcttta 14617177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 18335382 - 18335307
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| |||||||||| ||||||||||| |  ||||| |||||||| |||| ||| | || ||||||||||||||||    
T  18335382 aaaattagggtaaagttgcgtacaatacatcaaatgatgggaccctttcctagaccatgtgtatacgggagcttta 18335307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 19414502 - 19414573
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||| ||| ||||||||||||| || ||||||||||||||||||||  | ||||| ||| ||||||||    
T  19414502 aaaacaggttaaggctgcgtacaatacaccaaatggtgggaccccttcccgtaccctgcatatgcgggagct 19414573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 23796545 - 23796604
Alignment:
Q  84 tgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||| || |||||||| |||||||||||||| ||||| ||| | |||||||||    
T  23796545 tgcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgctggagcttta 23796604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 38478375 - 38478304
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || ||||||||| |||||||| | || ||||| ||| ||||||||    
T  38478375 aaaacagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcggaccctgcatatgcgggagct 38478304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 19932849 - 19932784
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtat 131  Q
    ||||| ||||||| ||||||||||||| || |||  ||||||||||||||||| || |||||||||    
T  19932849 aaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 19932784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 20004178 - 20004109
Alignment:
Q  76 ggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||||||||| || ||  ||||||||||||||||||||| || || ||| |||||||||||    
T  20004178 ggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttta 20004109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 30395822 - 30395745
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || || || ||| |||||||||||    
T  30395822 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 30395745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 35005187 - 35005264
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||| ||||||| || |||  ||||||||||||||||| || ||||||||| |||| ||||||    
T  35005187 aaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggcgcttta 35005264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 41319900 - 41319850
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttccc 118  Q
    ||||| ||||||| ||||||||||||| || ||||| ||||||||||||||    
T  41319900 aaaaacagggtaaggctgcgtacaatacaccaaatgatgggaccccttccc 41319850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 42304303 - 42304226
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| | ||||||||||| || |||  ||||||||||||||||| || |||||||||  ||||||||||    
T  42304303 aaaaacagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagcttta 42304226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 4430079 - 4430018
Alignment:
Q  82 gctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| || ||||||||| ||||||| |  ||||||| |||| |||||||||||    
T  4430079 gctgcgtacaatacaccaaatggtggaacccctttctggatcctgtgtatgcgggagcttta 4430018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 19701666 - 19701710
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||| ||||||||| || ||||||||| |||||||||||    
T  19701666 aaatggtggggccccttcccggaccctgcgtatgcgggagcttta 19701710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 34149053 - 34149005
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcc 117  Q
    |||||||||||| | ||||||||| |||| |||||||| ||||||||||    
T  34149053 aaaatagggtaaggttgcgtacaaaagaccaaatggtgagaccccttcc 34149005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 45264462 - 45264418
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||| |||| ||||| ||| |||||||||||    
T  45264462 aaatggtgggaccccttctcagaccctgcatatgcgggagcttta 45264418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 50606498 - 50606542
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| || ||||| ||| |||||||||||    
T  50606498 aaatggtgggaccccttcccggaccctgcatatgcgggagcttta 50606542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 18512550 - 18512473
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    |||||||||||||||| ||||||||||||| ||  ||||||||||||||||||| || ||||||||| ||||||||||    
T  18512550 tgtaaaaatagggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 18512473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 34626310 - 34626227
Alignment:
Q  60 tcctatgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| |||||||| ||||||| ||||||| ||||| || ||||||||||| |||||||| || ||||||||| |||||||||||    
T  34626310 tcctgtgtaaaaacagggtaaggctgcgttcaatacaccaaatggtgggatcccttcccggaccctgcgtatgcgggagcttta 34626227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 38604564 - 38604643
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    |||||||| ||||||| ||||||||||||| || |||||||| |||||||| || || ||||||||| ||||||||||||    
T  38604564 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgcgggagctttaa 38604643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 33872007 - 33871929
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||| ||| ||||||||||||| || ||||||||||||||||||||||| |||| |||| || ||||||||    
T  33872007 tgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggaccccttcccagaccctgtgtatgcgagagcttta 33871929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 7879687 - 7879752
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||    
T  7879687 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 7879752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 27889396 - 27889336
Alignment:
Q  82 gctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||||||||||| || |||||||||||||||||||| || ||||||||| ||||||||||    
T  27889396 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 27889336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 2541113 - 2541038
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||| ||| || |||||||||||||||||||| |  ||||||||| |||||||||||    
T  2541113 aaaaacagggtaaggctgcgtactatacaccaaatggtgggaccccttcccggtccctgcgtatgcgggagcttta 2541038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 10693166 - 10693095
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  10693166 aaaagagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 10693095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 21172102 - 21172031
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  21172102 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 21172031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 42391193 - 42391122
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  42391193 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 42391122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 8149039 - 8148986
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccaga 121  Q
    ||||||||||||| | ||||||||||| || |||||||||||||||||||||||    
T  8149039 aaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccaga 8148986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 19265852 - 19265905
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttccc 118  Q
    |||||||| ||||||| ||||||||||||| || ||||||||||||||||||||    
T  19265852 tgtaaaaagagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 19265905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 19266491 - 19266564
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||| ||||||| ||||||||||||| || |||| |||||| |||||||| || ||||||||| |||||||||    
T  19266491 aaaaacagggtaaggctgcgtacaatacaccaaattgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 40463914 - 40463990
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||||||  |||||| |||||||| |||| || |||||||||||||||||| | || ||||||||| |||||||||    
T  40463914 tgtaaaaactgggtaaggctgcgtataatacaccaaatggtgggaccccttctcggaccctgcgtatgcgggagctt 40463990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 48735208 - 48735144
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  48735208 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 48735144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 11741835 - 11741906
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||||||||||| ||||||||||||| || ||||||||||| |||||||| ||| ||||  || ||||||||    
T  11741835 aaaatagggtaaggctgcgtacaatacaccaaatggtgggatcccttcccggattctgcacatgcgggagct 11741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 32758301 - 32758372
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| |||| |||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  32758301 aaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 32758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 47077948 - 47077877
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||||| |||||| ||||||||||| || ||||||||||||||||||||| | ||| | ||| ||||||||    
T  47077948 aaaatagagtaaagttgcgtacaatacacaaaatggtgggaccccttcccaaaccctacatatgcgggagct 47077877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 28362231 - 28362165
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||| | ||| |||  |||||||||    
T  28362231 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagaccttgcatatgtgggagcttt 28362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 35787366 - 35787290
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||| | ||||| | ||||||||||| || |||||| ||||||||||||| || | ||||||| |||||||||    
T  35787366 tgtaaaaacatggtaaggttgcgtacaatacaccaaatggcgggaccccttcccggaccttgcgtatgcgggagctt 35787290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 42798718 - 42798782
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||| ||||||||||||| || |||||||||||||| ||||| || ||||| ||| ||||||||    
T  42798718 ggtaaggctgcgtacaatacaccaaatggtgggaccctttcccggaccctgcatatgcgggagct 42798782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 2663028 - 2662985
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccc 112  Q
    |||||||||||| ||||||||||||| || ||||||||||||||    
T  2663028 aaaatagggtaaggctgcgtacaatacaccaaatggtgggaccc 2662985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 11617682 - 11617619
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtat 131  Q
    ||||| |||||||  |||||||||||| || |||||||||||||||||||  || |||||||||    
T  11617682 aaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtat 11617619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 13805149 - 13805216
Alignment:
Q  75 gggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    |||||| |||| |||||||| || ||||||||||||| |||||  || ||||||||| ||||||||||    
T  13805149 gggtaaggctgtgtacaatacaccaaatggtgggaccacttcctggaccctgcgtatgcgggagcttt 13805216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 23419768 - 23419693
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||||||  |||||||||||| || ||||||||||||||||||| ||| | ||||| | |||| ||||||    
T  23419768 aaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcctagaccttgcgtgtgcgggggcttta 23419693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 31591194 - 31591131
Alignment:
Q  77 gtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||||||||| | ||||||||||||||||||||| || | ||| ||| ||||||||    
T  31591194 gtaaggctgcgtacaatacaataaatggtgggaccccttcccggaccttgcatatgcgggagct 31591131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 35334910 - 35334835
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||||||  ||| |||||||| ||  ||||||||||||||||||| || ||||||||| | |||||||||    
T  35334910 aaaaacagggtaagactgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgcaggagcttta 35334835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 18747534 - 18747603
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| |||||||| |||| || || ||||||||||||||||   | ||||||||| |||||||||||    
T  18747534 agggtaaggctgcgtataatacaccaattggtgggaccccttcctgaaccctgcgtatgcgggagcttta 18747603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 22065625 - 22065678
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttccc 118  Q
    |||||||||||||||||||||| ||||||| |  |||| ||| |||||||||||    
T  22065625 tgtaaaaatagggtaaagctgcatacaataaagcaaatagtgagaccccttccc 22065678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 28078226 - 28078149
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctttaaa 145  Q
    ||||| ||||||| | ||| | ||||| || ||||||||||||||||||||  ||||||| ||| || ||||||||||    
T  28078226 aaaaacagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaaa 28078149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 42476920 - 42476961
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcc 117  Q
    ||||| ||||||||||||| || |||||||||||||||||||    
T  42476920 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 42476961  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 47716500 - 47716576
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || || || ||| ||||||||||    
T  47716500 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt 47716576  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 19426983 - 19426939
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccc 112  Q
    |||||||||||||  |||||||||||| || ||||||||||||||    
T  19426983 aaaaatagggtaagactgcgtacaatacaccaaatggtgggaccc 19426939  T

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Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 13160739 - 13160815
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||    
T  13160739 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 13160815  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 45071302 - 45071378
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||||||| || | ||||||| |||||||||    
T  45071302 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgcgggagctt 45071378  T

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Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 8897858 - 8897783
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| ||| ||||||||| || |||||||||||||||||||| || ||||| ||| |||||||||||    
T  8897858 aaaaatagggtaaggctacgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagcttta 8897783  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 28817720 - 28817645
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| ||  ||||||||||||||||||| || ||||||||| |||||||||||    
T  28817720 aaaaacagggtaaggctgcgtacaatacacccaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 28817645  T

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Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 29521779 - 29521704
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||||||||||| ||| ||||||| ||||||||| |||||||||||    
T  29521779 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaacccatcccagaccctgcgtatgcgggagcttta 29521704  T

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Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 29877135 - 29877206
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagc 139  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||    
T  29877135 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagc 29877206  T

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Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 36720837 - 36720912
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| ||| |||||||    
T  36720837 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcggaagcttta 36720912  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 44530190 - 44530265
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||  || ||||||||| |||||||||||    
T  44530190 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttta 44530265  T

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Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 8484032 - 8483957
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||| || ||||||||||||| || || |||||||||||| ||||||| ||||||||| |||||||||||    
T  8484032 aaaaacagggcaaggctgcgtacaatacaccaattggtgggaccccatcccagaccctgcgtatgcgggagcttta 8483957  T

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Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 12670343 - 12670272
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  12670343 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 12670272  T

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Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 19729382 - 19729453
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| |||| |||||||| || |||||||||||||||||||| || ||||| ||||||||||||    
T  19729382 aaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatacgggagct 19729453  T

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Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 35261720 - 35261795
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| | ||||||||||| || |||||||||||||||||||  || ||||||||| |||||||||||    
T  35261720 aaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttta 35261795  T

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Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 5135383 - 5135309
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||| ||||||| |||| |||||||| || |||||||||||||||||||| || ||||||||| | ||||||||    
T  5135383 aaaaagagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcaggagcttt 5135309  T

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Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 2626563 - 2626636
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||| |||||||  |||||||||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||    
T  2626563 aaaaacagggtaagactgcgtacaatacaccaaatgatgggaccccttcccagaccctgcatatgcgggagctt 2626636  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 24365147 - 24365079
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||||| |||||| |||||| || |||||||||||||||||||| || |||||||||  |||||||||    
T  24365147 agggtaaggctgcgaacaatacaccaaatggtgggaccccttcccggaccctgcgtatgtgggagcttt 24365079  T

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Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 12625931 - 12626006
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||||||  |||| ||||||| || ||||||||||||||| |||| || ||||||||| |||||||||||    
T  12625931 aaaaacagggtaagactgcatacaatacaccaaatggtgggaccccctcccggaccctgcgtatgcgggagcttta 12626006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 31457210 - 31457285
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||||||||||  || ||||||||||||| |  ||||||| ||||||||||||| | ||||||||| ||||||||    
T  31457210 tgtaaaaataggaaaaggctgcgtacaatacatcaaatggtaggaccccttcccaaaccctgcgtatgcgggagct 31457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 20284165 - 20284088
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| |||||| ||||    
T  20284165 aaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagtttta 20284088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 21070793 - 21070716
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| |||||| ||||    
T  21070793 aaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagtttta 21070716  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 30454183 - 30454119
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||| ||||||||| ||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  30454183 ggtaaggctgcgtacgatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 30454119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 23286418 - 23286375
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccc 112  Q
    |||| ||||||||||||||||||||| || ||||||||||||||    
T  23286418 aaaacagggtaaagctgcgtacaatacaccaaatggtgggaccc 23286375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 16013511 - 16013572
Alignment:
Q  84 tgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||| ||||||  ||||| |||||||||||||| ||||| ||| |||||||||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagcttta 16013572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 26954174 - 26954251
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||  ||||||||||||||||||||| |  || ||| |||||||||||    
T  26954174 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagcttta 26954251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 39461090 - 39461013
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| || |||| ||||||||||||| || ||  |||||| ||||||||||| || ||||||||| |||||||||||    
T  39461090 aaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagcttta 39461013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 5689678 - 5689747
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||||  | | |||||||  ||||||||||    
T  5689678 agggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaaccatgcgtatgtgggagcttta 5689747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 7136617 - 7136546
Alignment:
Q  74 agggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || ||  |||||||||||||||||| || || || ||| |||||||||||    
T  7136617 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 7136546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 23574593 - 23574637
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||  |||||  |||||||||||||||||||||||||    
T  23574593 aaatggtgggattccttcgtagatcctgcgtatacgggagcttta 23574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 26102578 - 26102630
Alignment:
Q  88 tacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  26102578 tacaatacaccaaatggtgggaccccttcccggaccctgcttatgcgggagct 26102630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 28407475 - 28407519
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| || ||| ||||| |||||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagcttta 28407519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 43942365 - 43942420
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccaga 121  Q
    ||||| ||||||| ||||||||||||| || |||  ||||||||||||||||||||    
T  43942365 aaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccaga 43942420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 44781567 - 44781523
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||||| ||||||| ||||||||| |||||||||||    
T  44781567 aaatgttgggaccccgtcccagaccctgcgtatgcgggagcttta 44781523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 5648296 - 5648372
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||    
T  5648296 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 5648372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 14983875 - 14983950
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| | ||| ||||||| ||||||||||||||||||||||| || ||||||||| |||||||||||    
T  14983875 aaaaatagggtaaggttgcctacaatacactaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 14983950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 6430723 - 6430645
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| ||||||||||||| || ||||||||||||| |||||| || ||||||||| |||||||||||    
T  6430723 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccacttcccggaccctgcgtatgcgggagcttta 6430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 30639417 - 30639495
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| ||||||||||||| || |||||||| ||||||||||| || ||||| ||| |||||||||||    
T  30639417 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagaccccttcccggaccctgcatatgcgggagcttta 30639495  T

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Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 17043482 - 17043413
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| ||| | |||||||||    
T  17043482 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagaccctgcatatgctggagcttta 17043413  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 20639753 - 20639677
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa-tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||| ||||||||||||||||| || ||||||||| |||||||||||    
T  20639753 aaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 20639677  T

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Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 40915866 - 40915942
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||| | ||||| ||||||||||||| || ||||||||||| |||||||| || ||||||||| |||||||||    
T  40915866 tgtaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggagcccttcccggaccctgcgtatgcgggagctt 40915942  T

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Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 20225024 - 20225095
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  20225024 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 20225095  T

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Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 25629090 - 25629165
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| |||| |||||||| || |||||||||||||||||||| || ||| | ||| |||||||||||    
T  25629090 aaaaatagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctacatatgcgggagcttta 25629165  T

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Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 29207991 - 29207920
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  29207991 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 29207920  T

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Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 30690270 - 30690195
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||| ||||||| || || ||||||||||||||||| || ||||||||| |||||||||||    
T  30690270 aaaaacagggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgcgggagcttta 30690195  T

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Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 51865124 - 51865057
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||||||||| || |||||||||| ||||||||| || ||||||||| |||||||||||    
T  51865124 ggtaaggctgcgtacaatacaccaaatggtggggccccttcccggaccctgcgtatgcgggagcttta 51865057  T

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Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 21647005 - 21647082
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| ||||||||||||| || ||  ||||||||||||||||||||| || || ||| |||||||||||    
T  21647005 aaaaatagggtaaggctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggagcttta 21647082  T

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Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 47443998 - 47444071
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| | |||||||    
T  47443998 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcaggagctt 47444071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 49796846 - 49796911
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    ||||| ||||||||||||| || ||||||||||||||||||||  | ||||||||| |||||||||    
T  49796846 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

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Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 7909378 - 7909307
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacggg 136  Q
    |||||||| ||||||| | ||||||||||| || ||||||||||||||||||||  | ||||||||| ||||    
T  7909378 tgtaaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcggg 7909307  T

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Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 19027889 - 19027964
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || || |||||||||||||| |||||  ||||||||  ||||||||||    
T  19027889 aaaaacagggtaaggctgcgtacaatacaccaattggtgggacccctttccagactctgcgtatgtgggagcttta 19027964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 5306761 - 5306695
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtat 131  Q
    |||||||  ||||||| | ||||||||||| || |||||||||||||||||||| || |||||||||    
T  5306761 tgtaaaatcagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtat 5306695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 9832406 - 9832348
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgc 127  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || |||||    
T  9832406 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 9832348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 41018891 - 41018825
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtat 131  Q
    ||||||| |||||||| ||| ||||||||| || |||| |||||||||||||||||| | |||||||    
T  41018891 tgtaaaattagggtaaggctacgtacaatacaccaaatagtgggaccccttcccagaccttgcgtat 41018825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 44718641 - 44718683
Alignment:
Q  101 atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||||||| ||||||||| |||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagcttta 44718683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 9987925 - 9987852
Alignment:
Q  71 aatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    |||||||||| ||||| ||||||| || |||||||||||||||||||  || | ||| ||| ||||||||||||    
T  9987925 aatagggtaaggctgcatacaatacaccaaatggtgggaccccttccttgaccttgcatatgcgggagctttaa 9987852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 10277850 - 10277781
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggag 138  Q
    |||||||| ||| ||||||||||||| || ||||||||  ||||||||||||| ||||| ||| ||||||    
T  10277850 aaaataggataaggctgcgtacaatacaccaaatggtgaaaccccttcccagaccctgcatatgcgggag 10277781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 28494223 - 28494264
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagct 28494264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 30352667 - 30352599
Alignment:
Q  77 gtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||| || |||  ||||||||||||||| | || ||||||||| |||||||||||    
T  30352667 gtaaagctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagcttta 30352599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 47528623 - 47528574
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttccc 118  Q
    |||| ||||||| ||||||||||||| || ||||||||||||||||||||    
T  47528623 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 47528574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 48598918 - 48598869
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttccc 118  Q
    |||| ||||||| ||||||||||||| || ||||||||||||||||||||    
T  48598918 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 48598869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 16911609 - 16911680
Alignment:
Q  74 agggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||  |||||||||||    
T  16911609 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggagcttta 16911680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 20908723 - 20908655
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaa-tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||||||||| || ||| |||||||||||||||||  | ||||||||| |||||||||||    
T  20908723 ggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttta 20908655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 44363193 - 44363149
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| || ||||||||| |||||||||||    
T  44363193 aaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 44363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 54175101 - 54175181
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaataga-ctaaatggtgggacccctt-cccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| ||||||||||||| | | ||||||||||||||||| ||| || ||||| ||| |||||||||||    
T  54175101 tgtaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccccggaccctgcatatgcgggagcttta 54175181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 33836549 - 33836506
Alignment:
Q  100 aatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||||| || ||||||||| |||||||||||    
T  33836549 aatggtgggaccccttcccggaccctgcgtatgcgggagcttta 33836506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 35567211 - 35567286
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| |||| |||||| | || ||||||||||||||||||||  | ||||||| | |||||||||||    
T  35567211 aaaaacagggtaaggctgtgtacaacacaccaaatggtgggaccccttcccgaaccctgcgtctgcgggagcttta 35567286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 38755970 - 38755927
Alignment:
Q  100 aatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||||| || ||||||||| |||||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagcttta 38755927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 47482913 - 47482870
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    |||||||||||||||||||| || ||||||||| ||||||||||    
T  47482913 aaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 47482870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 23501828 - 23501905
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| | ||||||||||| || ||  |||||||||||||||||| || ||||| ||| |||||||||||    
T  23501828 aaaaacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagcttta 23501905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 25463179 - 25463237
Alignment:
Q  84 tgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||||||| | || |||||||||||||||||||| || ||||| ||| ||||||||||    
T  25463179 tgcgtacaacacaccaaatggtgggaccccttcccggaccctgcatatgcgggagcttt 25463237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 12711543 - 12711490
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccaga 121  Q
    |||||||||||||  |||||||||||| || |||||| ||||||||||| ||||    
T  12711543 aaaaatagggtaagactgcgtacaatacaccaaatggcgggaccccttctcaga 12711490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 16494259 - 16494335
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||||||||| ||||||| || |||  ||||||||||| |||||||| |||| |||| ||| |||||||    
T  16494259 aaaacagggtaaagctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagcttta 16494335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 55766554 - 55766485
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| ||| |||||||| ||||| |||| || | ||||||| || ||||||||    
T  55766554 agggtaaggctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgcgagagcttta 55766485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 55830809 - 55830740
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| ||| |||||||| ||||| |||| || | ||||||| || ||||||||    
T  55830809 agggtaatgctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgcgagagcttta 55830740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 8473710 - 8473666
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttccc 118  Q
    ||||||| ||||| ||||||| || ||||||||||||||||||||    
T  8473710 agggtaaggctgcatacaatacaccaaatggtgggaccccttccc 8473666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 11394924 - 11394968
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||| || || ||||||||| |||||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagcttta 11394968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 11404651 - 11404695
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||| || || ||||||||| |||||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagcttta 11404695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 20225121 - 20225192
Alignment:
Q  74 agggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || ||  |||||||||||||||||| || || || ||| |||||||||||    
T  20225121 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 20225192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 49938656 - 49938612
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||    
T  49938656 aaatggtgggaccccttcccataccctgcatatgcgggagcttta 49938612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 46872 - 46947
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| | ||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  46872 aaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 46947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 24866 - 24791
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||| | || ||||||||||||||||||||  | ||||||||| |||||||||||    
T  24866 aaaaacagggtaaggctgcgtacaacacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttta 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 46770 - 46725
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  46770 aaatggtgggaccccttcccagaccctgcgtatgcgggagctttaa 46725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 24448931 - 24449006
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| | |||||||||    
T  24448931 aaaaatagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcaggagcttta 24449006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 43574648 - 43574722
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  43574648 aaaacagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 43574722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 22600501 - 22600569
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||||| |||| |||||||| || ||||||||||| |||||||| |||||||||||| ||||||||||    
T  22600501 agggtaaggctgtgtacaatacaccaaatggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 32703464 - 32703535
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  32703464 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 32703535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 2838816 - 2838890
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagc 139  Q
    |||||||| ||||||| ||||||||||||| || ||||||||||| |||||| | || ||||||||| |||||||    
T  2838816 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggatcccttctcggaccctgcgtatgcgggagc 2838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 7097857 - 7097779
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| | ||||||||||| || |||||||| |||||||||||  | ||||||||| |||||||||||    
T  7097857 tgtaaaaacagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccgaaccctgcgtatgcgggagcttta 7097779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 19143040 - 19142962
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| |||||||||| || || |||||||||||||||||||| || | ||||||| |||||| ||||    
T  19143040 tgtaaaaacagggtaaggctgcgtacagtacaccaaatggtgggaccccttcccggaccatgcgtatgcgggagattta 19142962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 38879622 - 38879699
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| |||||||||||    
T  38879622 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 38879699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 41014356 - 41014434
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||||||  || || || ||| |||||||||||    
T  41014356 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccccgcatatgcgggagcttta 41014434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 8170077 - 8170008
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggag 138  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||    
T  8170077 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggag 8170008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 16957374 - 16957430
Alignment:
Q  87 gtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  16957374 gtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 16957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 16880741 - 16880666
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||||||| |||| |||||| || | ||||||| |||||||||||    
T  16880741 aaaaacagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggaccatgcgtatgcgggagcttta 16880666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 27328793 - 27328871
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    ||||| ||||||| ||||||||||||| || ||  ||||||||||||||||||  | ||||||||| ||||||||||||    
T  27328793 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggagctttaa 27328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 35710353 - 35710424
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||||||||||| ||||||| ||||| || |||||||||||||||||||| || | ||| ||| ||||||||    
T  35710353 aaaatagggtaaggctgcgttcaatacaccaaatggtgggaccccttcccggaacatgcatatgcgggagct 35710424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 12006424 - 12006347
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| ||| | ||||||| || ||  ||||||||||||||||||||| ||||| ||| |||||||||||    
T  12006424 aaaaatagggtaaggctccatacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagcttta 12006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 34154902 - 34154836
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||| ||||    
T  34154902 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcggtagct 34154836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 10306537 - 10306493
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| || ||||||||| |||||||||||    
T  10306537 aaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 7368438 - 7368509
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || || ||||||||||||||||| || ||||| |||  |||||||    
T  7368438 aaaacagggtaaggctgcgtacaatacaccaattggtgggaccccttcccggaccctgcatatgtgggagct 7368509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 25622533 - 25622576
Alignment:
Q  100 aatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||||| || ||||||||| |||||||||||    
T  25622533 aatggtgggaccccttcccggaccctgcgtatgcgggagcttta 25622576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 43334244 - 43334320
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||  ||||||||||||||||| || |||||| || |||||||||||    
T  43334244 aaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcg-atgcgggagcttta 43334320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 30006372 - 30006441
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| |||| ||||| || ||||||||||||||||||||||| |  |||  |||| |||||||||||    
T  30006372 agggtaaggctgtgtacattacactaaatggtgggaccccttcccggggcctatgtatgcgggagcttta 30006441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 39801591 - 39801632
Alignment:
Q  102 tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| ||| ||||| |||||||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagcttta 39801632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 41425989 - 41426042
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccaga 121  Q
    ||||| ||||||| ||||| ||||||| || || ||||||||||||||||||||    
T  41425989 aaaaacagggtaaggctgcatacaatacaccaattggtgggaccccttcccaga 41426042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 10546204 - 10546279
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  10546204 aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10546279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 9671221 - 9671295
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  9671221 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 9671295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 26684714 - 26684638
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||| ||||||  | ||||||||| ||||||||||||    
T  26684714 aaaaatatggtaaggctgcgtacaatatactaaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaa 26684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 17896301 - 17896376
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||| | || |||||||||  ||||||||||    
T  17896301 aaaaatagggtaaggctgcgtacaatataccaaatggtgggaccccttctcggaccctgcgtatgtgggagcttta 17896376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 14444766 - 14444844
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| ||||||| |||| |||| ||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  14444766 tgtaaaaacagggtaaggctgtgtacgatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 14444844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 32781382 - 32781308
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||| |||||||  |||||||||||| || ||||||||||||||||||||||| |||| |||| ||||||||||    
T  32781382 aaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccagaccctgtgtatgcgggagcttt 32781308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 36871534 - 36871607
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  36871534 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgga-cctgcgtatgcgggagcttta 36871607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 8455404 - 8455335
Alignment:
Q  74 agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||| | |||||||||    
T  8455404 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgccggagcttta 8455335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 22371092 - 22371160
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatac 133  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||||||| || |||| ||||||    
T  22371092 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgtgtatac 22371160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 39499325 - 39499249
Alignment:
Q  67 taaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||||||||||| |  ||||||||||| |||||  |  ||||||||||| |||||||||||    
T  39499325 taaaaatagggtaaagctgcgtacaatacatcaaatggtgggatcccttttcgaatcctgcgtatgcgggagcttta 39499249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 12024016 - 12023937
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    |||||||| ||||||| ||||||||||||| || ||||||||||||||| |||| || |||||||||  || ||||||||    
T  12024016 tgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccctcccggaccctgcgtatttggaagctttaa 12023937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 13245181 - 13245114
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||||||||| || ||||||||||||||||||||||| || | ||| |||||||||||||||    
T  13245181 ggtaaggctgcgtacattacactaaatggtgggaccccttcccggaccatgcatatacgggagcttta 13245114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 44643564 - 44643635
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagc 139  Q
    ||||| || |||| ||||||||||||  || ||||||||||||||||||||||| ||||||||| |||||||    
T  44643564 aaaaacagagtaaggctgcgtacaatgtaccaaatggtgggaccccttcccagaccctgcgtatgcgggagc 44643635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 10543739 - 10543816
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||||||||||||| || |||  ||||||||||||||||| || ||||||||| |||||||||||    
T  10543739 aaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10543816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 11514486 - 11514551
Alignment:
Q  77 gtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||||||||| || |||||||||||||| |||||||| ||||||||| |||||||||||    
T  11514486 gtaaggctgcgtacaatacaccaaatggtgggaccc-ttcccagaccctgcgtatgcgggagcttta 11514551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 25641543 - 25641617
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||||||||| ||||||||||| || |||| |||||||||||||||  ||||||||||| || ||||||||    
T  25641543 aaaacagggtaaagttgcgtacaatacaccaaattgtgggaccccttcccgaatcctgcgtatgcgagagcttta 25641617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 31158502 - 31158458
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||    
T  31158502 aaatggtgggaccccttcccagaccctgcgtatgcgggagcttta 31158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 17623601 - 17623668
Alignment:
Q  65 tgtaaaaat-agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtat 131  Q
    ||||||||| ||||||| ||||||||||||| || ||||||||| ||||||||||  |||||||||||    
T  17623601 tgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaatcctgcgtat 17623668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 17668039 - 17668118
Alignment:
Q  65 tgtaaaaat-agggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||| ||||||| ||||||||||||| || ||||||||| |||||||| |  | |||||||||| ||||||||||    
T  17668039 tgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcgaaccctgcgtatatgggagcttta 17668118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 21779354 - 21779283
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| | ||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  21779354 aaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 21779283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 14530359 - 14530436
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||| ||| ||||||||| || ||  |||||||||||||||||| || ||||||||| |||||||||||    
T  14530359 aaaaacagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 14530436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 25249835 - 25249757
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||| ||||||| ||||||||||||| || ||||||||||| ||||||||  | ||||||||| || ||||||||    
T  25249835 tgtacaaacagggtaaggctgcgtacaatacaccaaatggtgggatcccttcccgaaccctgcgtatgcgtgagcttta 25249757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 30826074 - 30826151
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||| | ||||||||||| || ||||||| ||| ||||||||||| ||| | ||| |||||||||||    
T  30826074 tgtaaaaatagggtaaggttgcgtacaatacaccaaatggt-ggaacccttcccagaccctacatatgcgggagcttta 30826151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 99345 - 99284
Alignment:
Q  82 gctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| || ||||||||| |||||||| |||| |||| |||| |||||||||||    
T  99345 gctgcgtacaatacaccaaatggtggaaccccttctcagaccctgtgtatgcgggagcttta 99284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 4516445 - 4516382
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtat 131  Q
    ||||| |||| || ||||||||||||| || || ||||||||||||||||| || |||||||||    
T  4516445 aaaaacagggcaacgctgcgtacaatacaccaattggtgggaccccttcccggaccctgcgtat 4516382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 23397806 - 23397853
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttc 116  Q
    |||||||||||| ||| ||||||||| || ||||||||||||||||||    
T  23397806 aaaatagggtaaggctacgtacaatacaccaaatggtgggaccccttc 23397853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 24890460 - 24890527
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||| ||||||| || || ||||||||||||||||| || ||||||||| | |||||||||    
T  24890460 ggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgcaggagcttta 24890527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 21377167 - 21377093
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||| ||||||| |||| |||||||  || ||||||||||||||||||||  | |||||||||  |||||||||    
T  21377167 aaaaacagggtaaggctgggtacaatgcaccaaatggtgggaccccttcccgaaccctgcgtatgtgggagcttt 21377093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 24860068 - 24860007
Alignment:
Q  82 gctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||| || ||||||| | |||||||| | || ||||||||| |||||||||||    
T  24860068 gctgcgtacaatacaccaaatggtagaaccccttctcggaccctgcgtatgcgggagcttta 24860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 33795359 - 33795400
Alignment:
Q  101 atggtgggaccccttcccagatcctgcgtatacgggagcttt 142  Q
    ||||||||||||||||||||| |||| |||| ||||||||||    
T  33795359 atggtgggaccccttcccagaccctgtgtatgcgggagcttt 33795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 34766330 - 34766371
Alignment:
Q  102 tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagcttta 34766371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 23488555 - 23488599
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| || ||||||||| || ||||||||    
T  23488555 aaatggtgggaccccttcccggaccctgcgtatgcgagagcttta 23488599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 30864514 - 30864438
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||||||||||| | ||||||||||| || |||||||  || || |||||| | ||||||||| ||| |||||    
T  30864514 tgtaaaaatagggtaagggtgcgtacaatataccaaatggtaagatcctttcccaaaccctgcgtatgcggaagctt 30864438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 31821437 - 31821361
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctttaa 144  Q
    ||||||||||||| | || |||||||| || ||||| ||||||||||| ||  | |||| |||| ||||||||||||    
T  31821437 aaaaatagggtaaggttgtgtacaatacaccaaatgatgggacccctttccgaaacctgtgtatgcgggagctttaa 31821361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 40762321 - 40762253
Alignment:
Q  75 gggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||| ||| ||||||||| || |||||||||||||| ||||  || |||||||||  ||||||||||    
T  40762321 gggtaaggctacgtacaatacaccaaatggtgggaccctttcctggaccctgcgtatgtgggagcttta 40762253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 45235908 - 45235836
Alignment:
Q  71 aatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||| ||| |||  |||| || ||||||||||||||||| ||||| ||| ||||| | |||||||||    
T  45235908 aatagggtaaggctacgtgtaatacacaaaatggtgggaccccttaccagaccctacgtatgcaggagcttta 45235836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 13120 - 13043
Alignment:
Q  66 gtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| | ||||| ||||||||||||| ||  |||||||||||||||||||||| ||||||||| |||| ||||||    
T  13120 gtaaaaacaaggtaaggctgcgtacaatacaccgaatggtgggaccccttcccagaccctgcgtatgcgggggcttta 13043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 32579465 - 32579541
Alignment:
Q  67 taaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||| |||||  ||||||||||||  | ||||||||||||||||||||||| ||||| ||| |||||||||||    
T  32579465 taaaaatacggtaagcctgcgtacaataccccaaatggtgggaccccttcccagaccctgcatatgcgggagcttta 32579541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 1347004 - 1347075
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  1347004 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 1347075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 1354850 - 1354779
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  1354850 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 1354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 12222011 - 12221918
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagctttaaatacaccaggttgcc 159  Q
    ||||| ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| |||||||||| | | |||| |||||||    
T  12222011 aaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgcc 12221918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 29355945 - 29355874
Alignment:
Q  74 agggtaaagctgcgtacaatagactaa--atggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||| ||||||||||||| || ||  |||||||||||||||||| || ||||||||| |||||||||||    
T  29355945 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 29355874  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 11395836 - 11395877
Alignment:
Q  102 tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  11395836 tggtgggaccccttcccggatcctgcgtatgcgggagcttta 11395877  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 383837 - 383781
Alignment:
Q  85 gcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagctt 141  Q
    |||||||||| || |||| ||||||||||||| |||| ||||||||| |||||||||    
T  383837 gcgtacaatacaccaaattgtgggaccccttctcagaccctgcgtatgcgggagctt 383781  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 12885985 - 12886029
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||    
T  12885985 aaatggtgggaccccttcccagaccctgcgtatgtgggagcttta 12886029  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 26097200 - 26097271
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||  ||||||||||||| || ||||| ||| ||||||||    
T  26097200 aaaacagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccggaccctgcatatgcgggagct 26097271  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 15866131 - 15866072
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgt 129  Q
    ||||| ||||||||||||||||  ||| || |||||||||||||||||||| || |||||||    
T  15866131 aaaaacagggtaaagctgcgta--atacaccaaatggtgggaccccttcccggaccctgcgt 15866072  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 18254556 - 18254629
Alignment:
Q  65 tgtaaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggag 138  Q
    |||||||| ||||||||||||| |||||||  | |||| ||||||||||||| ||||  || |||||| |||||    
T  18254556 tgtaaaaacagggtaaagctgcatacaatacccaaaatagtgggaccccttcacagactctacgtatatgggag 18254629  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 24097649 - 24097693
Alignment:
Q  99 aaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||||||||||||||||||| || ||||||||| ||| |||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagcttta 24097693  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 29016337 - 29016301
Alignment:
Q  107 ggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  29016337 ggaccccttcccagaccctgcgtatgcgggagcttta 29016301  T

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Target: scaffold0311 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 10851 - 10926
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||||  ||||||| ||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  10851 aaaaacagggtagggctgcgtccaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10926  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 48727 - 48656
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  48727 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 48656  T

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Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 24220 - 24155
Alignment:
Q  75 gggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||||| ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 24155  T

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Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 30619 - 30690
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagct 140  Q
    |||| ||||||  ||||||||||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  30619 aaaacagggtagggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 30690  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 59018 - 59095
Alignment:
Q  68 aaaaatagggtaaagctgcgtacaatagactaaa--tggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| |||||||  |||||||||||| || |||  ||||||||||||||||||||  |||||||| |||||||||||    
T  59018 aaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggagcttta 59095  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 72953 - 72886
Alignment:
Q  76 ggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    ||||| ||||| ||||||| || ||||||| | |||||||||| || ||||||||| |||||||||||    
T  72953 ggtaaggctgcctacaatacaccaaatggtagtaccccttcccggaacctgcgtatgcgggagcttta 72886  T

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Target: scaffold1176 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 1680 - 1606
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtatacgggagcttta 143  Q
    |||| ||| ||| ||||| ||||||| || ||||| |||||||||||||| || || |||||| |||||||||||    
T  1680 aaaacaggataaggctgcatacaatacaccaaatgatgggaccccttcccggacccggcgtatgcgggagcttta 1606  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 35110 - 35048
Alignment:
Q  69 aaaatagggtaaagctgcgtacaatagactaaatggtgggaccccttcccagatcctgcgtat 131  Q
    |||| ||||||| ||||||||||||| || |||||||||||||| ||||  |||| |||||||    
T  35110 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccctttcctggatcttgcgtat 35048  T

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