View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5964-Insertion-7 (Length: 282)
Name: NF5964-Insertion-7
Description: NF5964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5964-Insertion-7 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 9 - 281
Target Start/End: Original strand, 4520415 - 4520687
Alignment:
| Q |
9 |
cattatgcataaactcagtctacacaggtgtagaaaaattgaaaacagagaaagtaacgacagtaaaacagagaaagttgtgcacaaatacagtttagta |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4520415 |
cattatgcataaactcagtctacacaggtgtagaaaaattgaaaacagagaaagtaacgacagtaaaacagagaaagttgtgcacaaatacagtttagta |
4520514 |
T |
|
| Q |
109 |
tgaacaccacctccccattcgatatgagttgttggacagatggggatttctgcatnnnnnnngatgccttctacgtcttgcagatgggaatattctctta |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
4520515 |
tgaacaccacctccccattcgatatgagttgttggacagatggggatttctgcatccccccggatgccttctacgtcttgcagatgggaatattctctta |
4520614 |
T |
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| Q |
209 |
accttcaataaaagggaacaatgactagcaaggaaggcacgaagaaaattgaagaaattaaaagtctccttct |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
4520615 |
accttcaataaaagggaacaatgactagcaaggaaggcacgaagaaaactgaagaaattaaaagtctccttct |
4520687 |
T |
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