View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5965_low_3 (Length: 555)

Name: NF5965_low_3
Description: NF5965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5965_low_3
NF5965_low_3
[»] chr1 (78 HSPs)
chr1 (78-282)||(24422515-24422720)
chr1 (78-281)||(24427224-24427428)
chr1 (76-281)||(35721099-35721302)
chr1 (465-537)||(24426291-24426363)
chr1 (74-281)||(34934602-34934810)
chr1 (78-276)||(37396700-37396899)
chr1 (77-281)||(35911743-35911948)
chr1 (78-281)||(24609919-24610123)
chr1 (77-214)||(26863859-26863997)
chr1 (77-246)||(24611007-24611177)
chr1 (160-246)||(30722199-30722285)
chr1 (77-132)||(37395632-37395687)
chr1 (76-132)||(27264221-27264277)
chr1 (77-132)||(9774893-9774948)
chr1 (77-132)||(20723693-20723748)
chr1 (77-132)||(27262907-27262962)
chr1 (74-129)||(35722293-35722348)
chr1 (77-267)||(47038865-47039056)
chr1 (78-124)||(11711266-11711312)
chr1 (78-132)||(20722472-20722526)
chr1 (77-127)||(45979506-45979556)
chr1 (78-132)||(46075055-46075109)
chr1 (77-130)||(17977566-17977619)
chr1 (74-126)||(2604138-2604190)
chr1 (77-137)||(48588961-48589021)
chr1 (78-132)||(17976761-17976815)
chr1 (78-132)||(23469974-23470028)
chr1 (74-132)||(39163029-39163087)
chr1 (83-132)||(27816725-27816774)
chr1 (80-137)||(51240121-51240178)
chr1 (76-132)||(46073883-46073939)
chr1 (76-128)||(48334141-48334193)
chr1 (77-137)||(48594048-48594108)
chr1 (77-137)||(48598659-48598719)
chr1 (81-132)||(9774040-9774091)
chr1 (77-132)||(27815440-27815495)
chr1 (78-132)||(26865189-26865243)
chr1 (75-132)||(30724020-30724077)
chr1 (77-130)||(50164402-50164455)
chr1 (74-109)||(10887229-10887264)
chr1 (77-132)||(11710552-11710607)
chr1 (74-109)||(15516578-15516613)
chr1 (360-399)||(24426181-24426220)
chr1 (74-109)||(30323262-30323297)
chr1 (74-109)||(45380268-45380303)
chr1 (75-109)||(8140431-8140465)
chr1 (75-109)||(10887567-10887601)
chr1 (160-246)||(20723578-20723664)
chr1 (156-246)||(23469859-23469949)
chr1 (75-109)||(45638863-45638897)
chr1 (76-109)||(12360601-12360634)
chr1 (76-109)||(16026907-16026940)
chr1 (76-109)||(26324583-26324616)
chr1 (76-109)||(32035757-32035790)
chr1 (76-109)||(35056863-35056896)
chr1 (76-109)||(36912851-36912884)
chr1 (76-109)||(39747804-39747837)
chr1 (76-109)||(42482977-42483010)
chr1 (76-109)||(47819230-47819263)
chr1 (169-214)||(48856302-48856347)
chr1 (72-109)||(50429178-50429215)
chr1 (77-109)||(3247197-3247229)
chr1 (77-109)||(7867326-7867358)
chr1 (77-109)||(10631497-10631529)
chr1 (77-109)||(12360937-12360969)
chr1 (78-130)||(13074121-13074173)
chr1 (77-109)||(15526331-15526363)
chr1 (77-109)||(19720711-19720743)
chr1 (77-109)||(24507812-24507844)
chr1 (77-109)||(24654136-24654168)
chr1 (77-109)||(30322928-30322960)
chr1 (77-109)||(33000638-33000670)
chr1 (77-109)||(33045659-33045691)
chr1 (77-109)||(33234545-33234577)
chr1 (76-132)||(35910651-35910706)
chr1 (77-109)||(38164264-38164296)
chr1 (77-109)||(42483240-42483272)
chr1 (77-109)||(47819565-47819597)
[»] chr7 (74 HSPs)
chr7 (79-269)||(31489803-31489993)
chr7 (75-281)||(32197763-32197971)
chr7 (169-277)||(39619652-39619760)
chr7 (77-214)||(24195606-24195746)
chr7 (476-537)||(31488943-31489004)
chr7 (75-132)||(31848149-31848206)
chr7 (81-253)||(32544657-32544830)
chr7 (77-236)||(36749147-36749307)
chr7 (156-244)||(42255794-42255882)
chr7 (200-280)||(31488683-31488763)
chr7 (81-236)||(12385608-12385763)
chr7 (77-132)||(13418949-13419004)
chr7 (76-214)||(24197025-24197164)
chr7 (169-236)||(37784072-37784139)
chr7 (77-132)||(41693644-41693699)
chr7 (74-132)||(5611512-5611570)
chr7 (79-137)||(32196685-32196743)
chr7 (78-245)||(36748198-36748365)
chr7 (169-269)||(39618747-39618847)
chr7 (169-241)||(42255050-42255122)
chr7 (77-236)||(554244-554402)
chr7 (79-138)||(31853549-31853608)
chr7 (77-132)||(35212067-35212122)
chr7 (74-132)||(17066421-17066479)
chr7 (81-131)||(38742184-38742234)
chr7 (74-132)||(41694960-41695018)
chr7 (76-132)||(12933417-12933473)
chr7 (84-132)||(43869917-43869965)
chr7 (76-109)||(12932752-12932785)
chr7 (73-138)||(30512040-30512105)
chr7 (76-129)||(40576764-40576817)
chr7 (76-128)||(39619800-39619852)
chr7 (74-109)||(3975807-3975842)
chr7 (81-132)||(11217076-11217127)
chr7 (74-109)||(11767244-11767279)
chr7 (74-109)||(23399608-23399643)
chr7 (74-109)||(25988381-25988416)
chr7 (74-109)||(35838306-35838341)
chr7 (74-109)||(41054205-41054240)
chr7 (77-132)||(42254957-42255012)
chr7 (74-109)||(46759654-46759689)
chr7 (76-110)||(29198301-29198335)
chr7 (74-128)||(31846982-31847036)
chr7 (76-109)||(1614557-1614590)
chr7 (76-109)||(8144627-8144660)
chr7 (76-109)||(23676421-23676454)
chr7 (76-109)||(26878040-26878073)
chr7 (76-109)||(28262711-28262744)
chr7 (76-109)||(29198631-29198664)
chr7 (77-110)||(44568325-44568358)
chr7 (76-109)||(48192457-48192490)
chr7 (77-109)||(1614873-1614905)
chr7 (77-109)||(2945814-2945846)
chr7 (77-109)||(3975548-3975580)
chr7 (77-109)||(5233807-5233839)
chr7 (81-125)||(5610159-5610203)
chr7 (77-109)||(8144294-8144326)
chr7 (77-109)||(9659658-9659690)
chr7 (77-109)||(14543709-14543741)
chr7 (77-109)||(23399945-23399977)
chr7 (74-130)||(25046247-25046303)
chr7 (77-109)||(25092159-25092191)
chr7 (77-109)||(25092517-25092549)
chr7 (77-109)||(25988718-25988750)
chr7 (77-109)||(27458398-27458430)
chr7 (80-132)||(28462633-28462685)
chr7 (77-109)||(35837923-35837955)
chr7 (77-109)||(36687232-36687264)
chr7 (170-234)||(36892812-36892876)
chr7 (77-109)||(41053841-41053873)
chr7 (76-128)||(43065999-43066051)
chr7 (77-109)||(45228887-45228919)
chr7 (77-109)||(46828943-46828975)
chr7 (77-109)||(48852443-48852475)
[»] scaffold0517 (2 HSPs)
scaffold0517 (78-276)||(10315-10514)
scaffold0517 (77-132)||(11527-11582)
[»] chr3 (91 HSPs)
chr3 (169-277)||(52402982-52403090)
chr3 (76-246)||(42446524-42446695)
chr3 (160-246)||(42447677-42447763)
chr3 (76-133)||(54437471-54437528)
chr3 (74-133)||(46026072-46026131)
chr3 (75-132)||(47433814-47433871)
chr3 (80-132)||(20488368-20488420)
chr3 (76-132)||(39820609-39820665)
chr3 (77-132)||(52401016-52401071)
chr3 (77-132)||(53121301-53121356)
chr3 (74-132)||(20585649-20585707)
chr3 (74-132)||(52403129-52403187)
chr3 (75-137)||(52707533-52707595)
chr3 (77-133)||(40477378-40477434)
chr3 (78-281)||(43641143-43641347)
chr3 (79-138)||(40476222-40476281)
chr3 (76-246)||(51004140-51004311)
chr3 (78-129)||(52708625-52708676)
chr3 (156-246)||(32637077-32637167)
chr3 (74-132)||(45268575-45268633)
chr3 (156-245)||(3263243-3263332)
chr3 (79-132)||(20489363-20489416)
chr3 (79-132)||(45267306-45267359)
chr3 (169-259)||(20585401-20585491)
chr3 (76-130)||(22508733-22508787)
chr3 (77-214)||(46027339-46027477)
chr3 (78-132)||(46104343-46104397)
chr3 (78-132)||(48033058-48033112)
chr3 (75-132)||(976777-976834)
chr3 (156-237)||(32635673-32635754)
chr3 (74-131)||(38505585-38505642)
chr3 (78-138)||(9855178-9855238)
chr3 (81-125)||(15782721-15782765)
chr3 (74-109)||(12740903-12740938)
chr3 (75-110)||(20405191-20405226)
chr3 (77-132)||(32635593-32635648)
chr3 (74-109)||(39132875-39132910)
chr3 (74-109)||(40545560-40545595)
chr3 (77-128)||(44507808-44507859)
chr3 (74-109)||(47005488-47005523)
chr3 (74-109)||(51550415-51550450)
chr3 (74-109)||(52342191-52342226)
chr3 (78-132)||(4705681-4705735)
chr3 (160-246)||(4705766-4705852)
chr3 (82-128)||(11914842-11914888)
chr3 (79-109)||(14788441-14788471)
chr3 (75-109)||(28552352-28552386)
chr3 (76-110)||(30106188-30106222)
chr3 (160-214)||(39819395-39819449)
chr3 (168-246)||(46104428-46104506)
chr3 (76-109)||(474377-474410)
chr3 (76-109)||(9262124-9262157)
chr3 (76-109)||(9603888-9603921)
chr3 (79-124)||(15782216-15782261)
chr3 (77-126)||(20802847-20802896)
chr3 (76-109)||(28552019-28552052)
chr3 (76-109)||(29490712-29490745)
chr3 (79-128)||(32637197-32637246)
chr3 (77-138)||(41780807-41780868)
chr3 (76-109)||(45002019-45002052)
chr3 (76-109)||(47336550-47336583)
chr3 (79-132)||(48035737-48035790)
chr3 (76-109)||(51550080-51550113)
chr3 (169-222)||(52401109-52401162)
chr3 (76-109)||(54608832-54608865)
chr3 (77-109)||(474043-474075)
chr3 (78-130)||(977853-977905)
chr3 (77-109)||(1721421-1721453)
chr3 (163-246)||(3416579-3416660)
chr3 (77-109)||(3417820-3417852)
chr3 (77-109)||(12741240-12741272)
chr3 (77-109)||(14772210-14772242)
chr3 (162-214)||(15782634-15782686)
chr3 (77-109)||(19844550-19844582)
chr3 (77-109)||(21553888-21553920)
chr3 (77-109)||(25615974-25616006)
chr3 (74-106)||(30128280-30128312)
chr3 (77-109)||(31480135-31480167)
chr3 (77-109)||(32119553-32119585)
chr3 (77-109)||(35177254-35177286)
chr3 (76-128)||(37845403-37845455)
chr3 (77-109)||(38232240-38232272)
chr3 (80-132)||(39819314-39819366)
chr3 (81-109)||(42444040-42444068)
chr3 (156-236)||(45267384-45267464)
chr3 (77-109)||(47005153-47005185)
chr3 (77-109)||(47114486-47114518)
chr3 (77-109)||(47336227-47336259)
chr3 (169-237)||(50563013-50563081)
chr3 (77-109)||(53113442-53113474)
chr3 (77-109)||(54608517-54608549)
[»] chr6 (54 HSPs)
chr6 (80-277)||(17516164-17516362)
chr6 (77-253)||(26421726-26421903)
chr6 (74-138)||(3276363-3276427)
chr6 (77-132)||(16995450-16995505)
chr6 (78-132)||(20897502-20897556)
chr6 (75-132)||(21953203-21953260)
chr6 (76-214)||(34998062-34998202)
chr6 (74-244)||(17517201-17517372)
chr6 (81-132)||(20391217-20391268)
chr6 (78-132)||(18810532-18810586)
chr6 (68-125)||(1972390-1972447)
chr6 (78-132)||(1974157-1974211)
chr6 (78-132)||(21165246-21165300)
chr6 (80-125)||(20895960-20896005)
chr6 (76-128)||(34995112-34995164)
chr6 (78-137)||(17000277-17000336)
chr6 (174-253)||(26419609-26419688)
chr6 (77-132)||(29291358-29291413)
chr6 (78-124)||(20393281-20393327)
chr6 (81-138)||(1171650-1171707)
chr6 (74-109)||(1007120-1007155)
chr6 (168-235)||(1170530-1170597)
chr6 (74-109)||(6412214-6412249)
chr6 (74-109)||(19129489-19129524)
chr6 (74-109)||(19321100-19321135)
chr6 (74-109)||(21994372-21994407)
chr6 (74-109)||(22543687-22543722)
chr6 (75-109)||(18024344-18024378)
chr6 (160-202)||(20896030-20896072)
chr6 (80-126)||(25439650-25439696)
chr6 (76-109)||(1007478-1007511)
chr6 (76-109)||(3414385-3414418)
chr6 (76-109)||(3968978-3969011)
chr6 (76-109)||(8170120-8170153)
chr6 (76-109)||(8680773-8680806)
chr6 (76-109)||(10910933-10910966)
chr6 (76-109)||(20467687-20467720)
chr6 (76-109)||(21147402-21147435)
chr6 (76-109)||(22543352-22543385)
chr6 (76-109)||(25137326-25137359)
chr6 (80-129)||(30253547-30253596)
chr6 (77-109)||(3276323-3276355)
chr6 (77-109)||(3968644-3968676)
chr6 (77-109)||(6412548-6412580)
chr6 (77-109)||(12299109-12299141)
chr6 (77-109)||(12757609-12757641)
chr6 (77-109)||(13268108-13268140)
chr6 (78-110)||(15442937-15442969)
chr6 (77-109)||(17765008-17765040)
chr6 (77-109)||(17765344-17765376)
chr6 (77-109)||(19690392-19690424)
chr6 (77-109)||(21385250-21385282)
chr6 (77-109)||(21385553-21385585)
chr6 (77-109)||(23502236-23502268)
[»] chr8 (73 HSPs)
chr8 (148-236)||(18326582-18326670)
chr8 (77-231)||(10292815-10292969)
chr8 (74-246)||(38658477-38658648)
chr8 (76-277)||(45517820-45518021)
chr8 (78-138)||(28997992-28998052)
chr8 (77-259)||(22534599-22534782)
chr8 (74-132)||(10717117-10717175)
chr8 (76-132)||(10718453-10718509)
chr8 (78-214)||(1420363-1420501)
chr8 (74-137)||(3483629-3483692)
chr8 (77-132)||(22272275-22272330)
chr8 (79-132)||(4182623-4182676)
chr8 (77-138)||(14197824-14197885)
chr8 (79-132)||(28996835-28996888)
chr8 (77-269)||(36588221-36588414)
chr8 (80-133)||(38455449-38455502)
chr8 (76-132)||(38456735-38456791)
chr8 (74-137)||(41847180-41847243)
chr8 (80-213)||(45516399-45516532)
chr8 (76-132)||(1376933-1376989)
chr8 (76-132)||(1385560-1385616)
chr8 (76-132)||(22270941-22270997)
chr8 (77-125)||(30123151-30123199)
chr8 (72-132)||(30124228-30124288)
chr8 (77-132)||(22533316-22533371)
chr8 (78-132)||(4183984-4184038)
chr8 (68-109)||(4375979-4376020)
chr8 (77-130)||(6783577-6783630)
chr8 (168-233)||(10293728-10293793)
chr8 (77-125)||(9465320-9465368)
chr8 (160-236)||(41357266-41357342)
chr8 (74-109)||(3512235-3512270)
chr8 (74-109)||(10337115-10337150)
chr8 (74-109)||(11019826-11019861)
chr8 (74-109)||(28346727-28346762)
chr8 (79-138)||(39440421-39440480)
chr8 (78-132)||(3031548-3031602)
chr8 (75-109)||(4710189-4710223)
chr8 (75-109)||(10337418-10337452)
chr8 (75-108)||(4473701-4473734)
chr8 (76-109)||(5357421-5357454)
chr8 (76-109)||(9496339-9496372)
chr8 (76-109)||(17073805-17073838)
chr8 (76-109)||(17574432-17574465)
chr8 (76-109)||(25600228-25600261)
chr8 (76-109)||(25702778-25702811)
chr8 (76-109)||(32726240-32726273)
chr8 (83-128)||(34904518-34904563)
chr8 (76-109)||(35097326-35097359)
chr8 (76-109)||(35346967-35347000)
chr8 (77-130)||(36589394-36589447)
chr8 (72-109)||(37536388-37536425)
chr8 (160-245)||(41846729-41846814)
chr8 (77-109)||(2728231-2728263)
chr8 (77-109)||(7420229-7420261)
chr8 (77-109)||(8298944-8298976)
chr8 (77-109)||(9496692-9496724)
chr8 (77-109)||(10540751-10540783)
chr8 (77-109)||(11019519-11019551)
chr8 (77-109)||(11976372-11976404)
chr8 (77-109)||(20277691-20277723)
chr8 (73-109)||(20278026-20278062)
chr8 (77-109)||(20984145-20984177)
chr8 (77-109)||(21064318-21064350)
chr8 (73-109)||(21064653-21064689)
chr8 (77-109)||(27117945-27117977)
chr8 (77-109)||(28346393-28346425)
chr8 (77-109)||(28497254-28497286)
chr8 (77-109)||(32725906-32725938)
chr8 (77-109)||(34963299-34963331)
chr8 (77-109)||(37536085-37536117)
chr8 (77-109)||(39439923-39439955)
chr8 (77-109)||(44997930-44997962)
[»] chr2 (64 HSPs)
chr2 (80-253)||(23862933-23863107)
chr2 (76-277)||(23861750-23861951)
chr2 (77-132)||(25979256-25979311)
chr2 (74-132)||(25977866-25977924)
chr2 (76-132)||(2412433-2412489)
chr2 (77-132)||(1777468-1777523)
chr2 (77-132)||(8809595-8809651)
chr2 (75-138)||(29794316-29794378)
chr2 (160-246)||(11087134-11087220)
chr2 (78-132)||(25283277-25283331)
chr2 (81-138)||(43824166-43824223)
chr2 (78-130)||(1778797-1778849)
chr2 (81-133)||(12067000-12067052)
chr2 (76-132)||(36837783-36837839)
chr2 (81-132)||(4040221-4040272)
chr2 (81-124)||(24754171-24754214)
chr2 (78-128)||(11088689-11088739)
chr2 (74-108)||(15531025-15531059)
chr2 (76-130)||(19603736-19603790)
chr2 (78-132)||(19604924-19604978)
chr2 (156-214)||(24749522-24749580)
chr2 (160-253)||(1590782-1590875)
chr2 (80-125)||(8810715-8810760)
chr2 (76-132)||(20245310-20245367)
chr2 (72-109)||(25705418-25705455)
chr2 (160-249)||(43825815-43825904)
chr2 (169-237)||(3924764-3924832)
chr2 (69-109)||(20131308-20131348)
chr2 (74-109)||(14003405-14003440)
chr2 (74-109)||(24358612-24358647)
chr2 (76-110)||(10671628-10671662)
chr2 (91-129)||(12067041-12067079)
chr2 (76-118)||(12068364-12068406)
chr2 (75-109)||(16673740-16673774)
chr2 (156-214)||(25977949-25978007)
chr2 (76-110)||(30215839-30215873)
chr2 (76-109)||(13215058-13215091)
chr2 (76-109)||(16523294-16523327)
chr2 (76-109)||(31909447-31909480)
chr2 (76-109)||(41451835-41451868)
chr2 (76-109)||(44559060-44559093)
chr2 (77-109)||(2481526-2481558)
chr2 (77-109)||(3172019-3172051)
chr2 (77-109)||(4423894-4423926)
chr2 (77-109)||(4424154-4424186)
chr2 (78-130)||(11087049-11087101)
chr2 (77-109)||(14003711-14003743)
chr2 (77-109)||(15842792-15842824)
chr2 (77-109)||(16522990-16523022)
chr2 (77-109)||(16673410-16673442)
chr2 (77-109)||(18113088-18113120)
chr2 (169-229)||(25282498-25282558)
chr2 (77-109)||(25705084-25705116)
chr2 (77-109)||(25954114-25954146)
chr2 (155-191)||(26239021-26239057)
chr2 (77-109)||(29859841-29859873)
chr2 (77-109)||(30215421-30215453)
chr2 (78-110)||(30844575-30844607)
chr2 (77-109)||(31644840-31644872)
chr2 (77-109)||(33576086-33576118)
chr2 (77-109)||(37228732-37228764)
chr2 (77-109)||(37911089-37911121)
chr2 (77-109)||(40125258-40125290)
chr2 (77-109)||(43672287-43672319)
[»] scaffold0002 (5 HSPs)
scaffold0002 (75-133)||(345901-345959)
scaffold0002 (74-236)||(376269-376432)
scaffold0002 (78-132)||(374335-374389)
scaffold0002 (75-132)||(344934-344991)
scaffold0002 (169-246)||(345030-345107)
[»] chr4 (74 HSPs)
chr4 (76-265)||(45618283-45618472)
chr4 (78-229)||(32699221-32699373)
chr4 (16-77)||(25349308-25349369)
chr4 (77-236)||(3880397-3880556)
chr4 (78-138)||(44705299-44705359)
chr4 (78-132)||(22204055-22204109)
chr4 (160-246)||(29060771-29060857)
chr4 (78-132)||(42359351-42359405)
chr4 (77-138)||(17326733-17326794)
chr4 (74-266)||(19674410-19674602)
chr4 (175-246)||(29415649-29415720)
chr4 (77-132)||(33137233-33137288)
chr4 (77-132)||(42358031-42358086)
chr4 (76-214)||(54121622-54121761)
chr4 (74-132)||(3879082-3879140)
chr4 (76-130)||(41933816-41933870)
chr4 (74-132)||(45619736-45619794)
chr4 (76-129)||(35054660-35054713)
chr4 (78-138)||(19675619-19675679)
chr4 (81-129)||(41935078-41935126)
chr4 (81-132)||(16574373-16574424)
chr4 (80-222)||(16916069-16916212)
chr4 (77-132)||(17281570-17281625)
chr4 (77-132)||(17370072-17370127)
chr4 (81-132)||(17371850-17371901)
chr4 (78-234)||(32697999-32698150)
chr4 (169-268)||(41934937-41935036)
chr4 (77-246)||(16573377-16573546)
chr4 (160-245)||(45533376-45533461)
chr4 (77-109)||(5259179-5259211)
chr4 (74-110)||(13074093-13074129)
chr4 (77-137)||(34659705-34659765)
chr4 (76-128)||(38166493-38166545)
chr4 (74-109)||(13631224-13631259)
chr4 (74-109)||(14488156-14488191)
chr4 (74-109)||(14594202-14594237)
chr4 (77-132)||(29059712-29059767)
chr4 (74-109)||(35464014-35464049)
chr4 (169-236)||(41933910-41933977)
chr4 (74-109)||(42823772-42823807)
chr4 (81-131)||(38167779-38167829)
chr4 (156-246)||(45619621-45619711)
chr4 (76-109)||(4211559-4211592)
chr4 (76-109)||(11693090-11693123)
chr4 (76-109)||(12152152-12152185)
chr4 (76-109)||(12152462-12152495)
chr4 (76-109)||(14487800-14487833)
chr4 (76-109)||(20291984-20292017)
chr4 (77-130)||(29060889-29060942)
chr4 (76-109)||(29420506-29420539)
chr4 (76-109)||(33134889-33134922)
chr4 (77-132)||(40198576-40198628)
chr4 (156-205)||(42358111-42358160)
chr4 (155-192)||(46115492-46115529)
chr4 (155-192)||(46128626-46128663)
chr4 (76-109)||(53915681-53915714)
chr4 (76-109)||(53916016-53916049)
chr4 (156-281)||(55542435-55542559)
chr4 (77-109)||(5827942-5827974)
chr4 (77-109)||(13530682-13530714)
chr4 (77-109)||(13631568-13631600)
chr4 (77-109)||(14791775-14791807)
chr4 (77-109)||(24774044-24774076)
chr4 (77-109)||(25423923-25423955)
chr4 (148-192)||(25424032-25424076)
chr4 (77-109)||(25424281-25424313)
chr4 (77-109)||(29499181-29499213)
chr4 (77-109)||(30046761-30046793)
chr4 (77-109)||(30061102-30061134)
chr4 (77-109)||(35119291-35119323)
chr4 (77-109)||(43231087-43231119)
chr4 (77-109)||(43231358-43231390)
chr4 (80-132)||(47359516-47359568)
chr4 (77-109)||(54903444-54903476)
[»] scaffold0516 (2 HSPs)
scaffold0516 (156-249)||(1022-1115)
scaffold0516 (78-132)||(1140-1194)
[»] chr5 (47 HSPs)
chr5 (77-132)||(3936577-3936632)
chr5 (80-214)||(14809165-14809300)
chr5 (75-132)||(3954049-3954106)
chr5 (75-128)||(31540493-31540546)
chr5 (68-132)||(4565383-4565447)
chr5 (74-251)||(15603944-15604120)
chr5 (75-131)||(15599762-15599818)
chr5 (77-132)||(27571134-27571189)
chr5 (76-246)||(3937951-3938121)
chr5 (169-246)||(3204994-3205071)
chr5 (77-138)||(34911827-34911888)
chr5 (78-132)||(31541627-31541681)
chr5 (78-246)||(6893900-6894069)
chr5 (73-109)||(1105117-1105153)
chr5 (74-109)||(1104854-1104889)
chr5 (74-109)||(19565800-19565835)
chr5 (80-131)||(27570058-27570109)
chr5 (74-109)||(32108804-32108839)
chr5 (74-109)||(35877021-35877056)
chr5 (156-269)||(3936657-3936770)
chr5 (76-109)||(5917124-5917157)
chr5 (76-109)||(19685015-19685048)
chr5 (76-109)||(20690731-20690764)
chr5 (76-109)||(24443713-24443746)
chr5 (77-109)||(1381246-1381278)
chr5 (77-109)||(1381580-1381612)
chr5 (80-132)||(3205107-3205159)
chr5 (77-109)||(4736511-4736543)
chr5 (77-109)||(5917429-5917461)
chr5 (77-109)||(17070534-17070566)
chr5 (77-109)||(18258161-18258193)
chr5 (77-109)||(18258496-18258528)
chr5 (77-109)||(19565466-19565498)
chr5 (77-109)||(19685349-19685381)
chr5 (77-109)||(20660947-20660979)
chr5 (77-109)||(20986058-20986090)
chr5 (77-109)||(24443379-24443411)
chr5 (160-268)||(25253999-25254107)
chr5 (80-132)||(25254136-25254188)
chr5 (160-268)||(25317789-25317897)
chr5 (80-132)||(25317926-25317978)
chr5 (77-109)||(28213372-28213404)
chr5 (77-109)||(35876687-35876719)
chr5 (77-109)||(35928063-35928095)
chr5 (77-109)||(37271675-37271707)
chr5 (77-109)||(38170513-38170545)
chr5 (77-109)||(40764414-40764446)
[»] scaffold0106 (2 HSPs)
scaffold0106 (76-132)||(30912-30968)
scaffold0106 (75-132)||(29726-29783)
[»] scaffold0230 (1 HSPs)
scaffold0230 (78-132)||(436-490)
[»] scaffold0001 (2 HSPs)
scaffold0001 (78-132)||(119593-119647)
scaffold0001 (78-132)||(120990-121044)
[»] scaffold0562 (1 HSPs)
scaffold0562 (74-132)||(9918-9976)
[»] scaffold0765 (1 HSPs)
scaffold0765 (81-202)||(1863-1985)
[»] scaffold0009 (1 HSPs)
scaffold0009 (77-131)||(202578-202632)
[»] scaffold0684 (1 HSPs)
scaffold0684 (74-109)||(2629-2664)
[»] scaffold0160 (1 HSPs)
scaffold0160 (74-109)||(27333-27368)
[»] scaffold0095 (1 HSPs)
scaffold0095 (79-138)||(42754-42813)
[»] scaffold0024 (1 HSPs)
scaffold0024 (74-109)||(75733-75768)
[»] scaffold0005 (2 HSPs)
scaffold0005 (74-109)||(223141-223176)
scaffold0005 (77-109)||(47924-47956)
[»] scaffold0599 (1 HSPs)
scaffold0599 (82-128)||(6593-6639)
[»] scaffold0078 (1 HSPs)
scaffold0078 (76-109)||(3750-3783)
[»] scaffold0026 (2 HSPs)
scaffold0026 (155-192)||(82591-82628)
scaffold0026 (76-109)||(82675-82708)
[»] scaffold0119 (1 HSPs)
scaffold0119 (78-110)||(16724-16756)


Alignment Details
Target: chr1 (Bit Score: 106; Significance: 9e-53; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 78 - 282
Target Start/End: Original strand, 24422515 - 24422720
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgttt 176  Q
    |||||||||||| |||||||||||| |||||||| ||| |||| ||||| |||||  ||||          ||||| ||| |||||||||  ||||||||    
T  24422515 ggctaaaatatgcttttggtccctgtaaatatagtgaagttggattttgatccctggtaaaaaaaaaatttgaaaaacgtacttgcaaaaatttttgttt 24422614  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtg 276  Q
    ||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24422615 ttaaaaatagtccttagacccactttcttgctaatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtg 24422714  T
Q  277 gcaata 282  Q
    ||||||    
T  24422715 gcaata 24422720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 78 - 281
Target Start/End: Complemental strand, 24427428 - 24427224
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgttt 176  Q
    |||||||||||||||||||||||| ||||||||| || |||| ||||| ||||||  ||||          |||||| ||||||||||||  ||||||||    
T  24427428 ggctaaaatatgtttttggtccctacaaatatagcgagtttgagttttagtccctggtaaaaattttatttgaaaattgtccttgcaaaattttttgttt 24427329  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtg 276  Q
    || |||||||||| ||  |||||||||||| ||||||||||||||| ||||||| ||  ||||||||||||||||||| |||||||||||||||||| ||    
T  24427328 tttaaaatagtccctgaacccactttcttggtgatttgtctcatttttgcctatttgaaatatgctgactatgcaaacctgtacatgtggcatccagttg 24427229  T
Q  277 gcaat 281  Q
    |||||    
T  24427228 gcaat 24427224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 76 - 281
Target Start/End: Original strand, 35721099 - 35721302
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||         ||||| ||| | |||||||  ||||||     
T  35721099 taggctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtccctggtaaaaaaaatt--gaaaaacgttcctgcaaaattttttgta 35721196  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggt 275  Q
    ||| |||||||||| ||| |||||||| | | ||||||||| ||||| ||| ||  ||||| ||||||||  ||||||||| ||||||||||||| ||||    
T  35721197 ttttaaaatagtccctggtcccactttttcgatgatttgtcacatttatgcatacttggcagatgctgacggtgcaaacatttacatgtggcatctaggt 35721296  T
Q  276 ggcaat 281  Q
    ||||||    
T  35721297 ggcaat 35721302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 465 - 537
Target Start/End: Original strand, 24426291 - 24426363
Alignment:
Q  465 attcatcttaatcaaatcaaaattctggaaaactaaattcatcttcgtgcaagatcttcatcttcatcaattc 537  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24426291 attcatcttaatcaaatcaaaattctggaaaactaaattcatcttcgtgcaacatcttcatcttcatcaattc 24426363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 74 - 281
Target Start/End: Complemental strand, 34934810 - 34934602
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacatttt 172  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||||| |  ||||          ||||| ||||| |||||||  ||||    
T  34934810 tttaggctaaaatatgctttttgtccctgcaaatatagcgaatttgggttttggtccttggtaaaatttttttttgaaaaacgtccatgcaaaatttttt 34934711  T
Q  173 gtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatcca 272  Q
    |||||| |||||||||| ||| |||||||| | | ||||||||| ||||| ||| ||  | ||| ||||||||  |||||| ||||||||||||||||||    
T  34934710 gttttttaaaatagtccctggtcccactttttcgatgatttgtcacatttatgcatactttgcagatgctgacggtgcaaatatgtacatgtggcatcca 34934611  T
Q  273 ggtggcaat 281  Q
    |||||||||    
T  34934610 ggtggcaat 34934602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 276
Target Start/End: Complemental strand, 37396899 - 37396700
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgttt 176  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |  ||||          ||||| ||||| |||||||  ||||||||    
T  37396899 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaaaaaaattttttgaaaaacgtccctgcaaaattttttgttt 37396800  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtg 276  Q
    || |||||||||| ||| |||||||| | | ||||||||| ||||| ||| ||  ||||| ||||||||  |||||||||||||||||||||||||||||    
T  37396799 tttaaaatagtccctggtcccactttttcgatgatttgtcacatttatgcatacttggcagatgctgacggtgcaaacatgtacatgtggcatccaggtg 37396700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 77 - 281
Target Start/End: Complemental strand, 35911948 - 35911743
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgtt 175  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| |  ||||          ||||| ||||| |||||||  |||| ||    
T  35911948 aggctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccttggtaaaaaaaaaatttgaaaaacgtccctgcaaaaatttttatt 35911849  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggt 275  Q
    ||| ||||| |||| ||| |||||||| | | ||||||||| ||||| ||| ||  ||||| ||||||||  ||||||||||||||||||||||||||||    
T  35911848 ttttaaaatggtccctggtcccactttttcgatgatttgtcacatttatgcatacttggcagatgctgacggtgcaaacatgtacatgtggcatccaggt 35911749  T
Q  276 ggcaat 281  Q
    ||||||    
T  35911748 ggcaat 35911743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 78 - 281
Target Start/End: Original strand, 24609919 - 24610123
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgttt 176  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||||||||| ||||          |||  || ||| |||||||  ||||||||    
T  24609919 ggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctagtaaataaattttttgaatttcatccctgcaaaattttttgttt 24610018  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtg 276  Q
    || |||||||||| | | |||||||| ||| ||||||||| ||||| ||| ||||||||||  ||||| | | ||||| ||||||||||||||||| |||    
T  24610019 tttaaaatagtccctcgccccacttttttggtgatttgtcacatttgtgcatatgtggcatgagctgattgtacaaacttgtacatgtggcatccatgtg 24610118  T
Q  277 gcaat 281  Q
    |||||    
T  24610119 gcaat 24610123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 26863859 - 26863997
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa-nnnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||  ||||          ||||||| ||| |||||||  |||||||    
T  26863859 aggctaaaatgtgtttttggtccctgcaaatatagcgaatttgagttttggtccctggtaaattttttttttgaaaatcatccctgcaaaaatttttgtt 26863958  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    ||| ||||||||||||||||||||||| ||| |||||||    
T  26863959 ttttaaaatagtccttgggcccactttattgctgatttg 26863997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 24611177 - 24611007
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||||||||||||||| ||||||   || |||| ||||||||||||  | |||         |||  || ||| |||||||  |||||||    
T  24611177 aggctaaaatatgtttttggtccctgtaaatatgacgagtttgagttttggtccctggtaaaataaaattttgaatttcatccctgcaaaaatttttgtt 24611078  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    ||| |||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||  ||||||||    
T  24611077 tttcaaaatagtccttggacccactttcttgatgatttgtctcatttttgtctatgtggcagctgctgact 24611007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 30722199 - 30722285
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||  |||||||||| |||||||||| ||| |||||||||||| ||||||||||||||| |||||| |||||| |||||||||    
T  30722199 tgcaaaattttttgttttttaaaatagtccctggacccactttcttgctgatttgtctcatttttgcctacgtggcaaatgctgact 30722285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 37395632 - 37395687
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  37395632 aggctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccct 37395687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 27264277 - 27264221
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  27264277 taggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttggtccct 27264221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 9774948 - 9774893
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  9774948 aggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccct 9774893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 20723748 - 20723693
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  20723748 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttagtccct 20723693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 27262907 - 27262962
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  27262907 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgtgttttggtccct 27262962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 35722348 - 35722293
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtc 129  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  35722348 tttaggctaaaatatgtttttggtccctgtaaatatagcgaatttggattttggtc 35722293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 267
Target Start/End: Original strand, 47038865 - 47039056
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||||||| ||||||||||||||||  | |||||||||||||||||  | |||         |||   | ||| |||||||  |||||||    
T  47038865 aggctaaaatatgtttttagtccctgcaaatatagctagtttgggttttggtccctggtaaaaaaaaattttgaattccatccctgcaaaaatttttgtt 47038964  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggc 267  Q
    ||| |||||||||||||| |||||||||| ||||||||| || |||| ||| || |||||| ||| ||||| | ||| | | ||||||||||    
T  47038965 ttttaaaatagtccttggacccactttctagttgatttggctgatttttgcttaggtggcagatgttgactgtacaatcttatacatgtggc 47039056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 11711312 - 11711266
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttt 124  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  11711312 ggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttt 11711266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 20722472 - 20722526
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  20722472 ggctaaaatgtgcttttggtccctgcaaatatagcgaatttgggttttggtccct 20722526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 45979556 - 45979506
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttgg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  45979556 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttgg 45979506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 46075109 - 46075055
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  46075109 ggctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttggtccct 46075055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 17977619 - 17977566
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  17977619 aggcttaaatatggttttggtccctgcaaatatagcgaatttgggttttggtcc 17977566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 2604190 - 2604138
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttg 126  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  2604190 tttaggctaaaatatgtttttagtccctgcaaatatggggagtttgggttttg 2604138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 48589021 - 48588961
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    |||||||||||||||||||||||||| |||||| | || ||||||||||||||||| ||||    
T  48589021 aggctaaaatatgtttttggtccctgtaaatatggtgagtttgggttttggtccctgataa 48588961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 17976761 - 17976815
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  17976761 ggcttaaatatggttttggttcctgcaaatatagcgaatttgggttttggtccct 17976815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 23470028 - 23469974
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||| |||||    
T  23470028 ggctaaaatatgtttttggtccctgcaaatatagcgagtttcggttttgatccct 23469974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 39163087 - 39163029
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||| ||||||||||||||||||| | ||  ||||||||||||||||    
T  39163087 tttaggctaaaatatgcttttggtccctgcaaatatggcgaggttgggttttggtccct 39163029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 27816774 - 27816725
Alignment:
Q  83 aaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  27816774 aaatatggttttggtccctgcaaatatagccaatttgggttttggtccct 27816725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 51240121 - 51240178
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||| ||||| ||||    
T  51240121 ctaaaatatgtttttggtctctgcaaatatagcgaatttggattttgatccctgataa 51240178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 46073883 - 46073939
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||| |||||||||||||||  |||||||||||| ||||||    
T  46073883 taggctaaaatatgcttttgatccctgcaaatatagcaaatttgggttttagtccct 46073939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 48334193 - 48334141
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||    
T  48334193 taggctaaaatatgcttttggtccctacaaatatagcgaatttgagttttggt 48334141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 48594108 - 48594048
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    |||||||||||||||||||||||||| |||||| | || ||||||||||| ||||| ||||    
T  48594108 aggctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctgataa 48594048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 48598719 - 48598659
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    |||||||||||||||||||||||||| |||||| | || ||||||||||| ||||| ||||    
T  48598719 aggctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctgataa 48598659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 9774040 - 9774091
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||  || |||| ||||||||||||    
T  9774040 taaaatatgtttttggtccctgcaaatataacgagtttgagttttggtccct 9774091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 27815440 - 27815495
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||| ||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  27815440 aggcttaaatatggttctggtccctgcaaatatagccaatttgggttttggtccct 27815495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 26865243 - 26865189
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||| ||||||||| |||||||||||| |||||||| |||| ||||||    
T  26865243 ggctaaaatatatttttggtctctgcaaatatagcgaatttggattttagtccct 26865189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 30724077 - 30724020
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||| |||| |||||||||||||||   |||||| ||||||||||||    
T  30724077 ttaggctaaaatatgcttttcgtccctgcaaatataacaaatttgagttttggtccct 30724020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 50164402 - 50164455
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    ||||||||||||| ||||||||||||||||||| | || |||| ||||||||||    
T  50164402 aggctaaaatatgcttttggtccctgcaaatatggcgagtttgagttttggtcc 50164455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 10887229 - 10887264
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  10887229 tttaggctaaaatatggttttggtccctgcaaatat 10887264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 11710552 - 11710607
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||| |||||| |||||||  ||  ||||||||||||||||    
T  11710552 aggctaaaatatgtttttgatccctgtaaatataacgaggttgggttttggtccct 11710607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 15516578 - 15516613
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  15516578 tttaggctaaaatatggttttggtccctgcaaatat 15516613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 24426181 - 24426220
Alignment:
Q  360 ttttaatatattaaaaacagaatatccttccatttcaccc 399  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  24426181 ttttaatatattaaaaatagaatctccttccatttcaccc 24426220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 30323297 - 30323262
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  30323297 tttaggctaaaatatgattttggtccctgcaaatat 30323262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 45380268 - 45380303
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  45380268 tttaggctaaaatatggttttggtccctgcaaatat 45380303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 8140431 - 8140465
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  8140431 ttaggctaaaatatggttttggtccctgcaaatat 8140465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 10887601 - 10887567
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  10887601 ttaggctaaaatatggttttggtccctgcaaatat 10887567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 20723664 - 20723578
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||  |||||||||| |||||||||||||  ||||||||  || ||||||| | ||||| ||| |||||||||  ||||||||    
T  20723664 tgcaaaattttttgttttttaaaatagtccttgaccccactttactgatgatttggcccatttttgcatatgtggcaggtgctgact 20723578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 23469949 - 23469859
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||||||  |||||||||| |||||||||| | | |||||||  ||| ||||||| | ||||| ||| ||||||||||  |||||||    
T  23469949 tccttgcaaaattttttgttttttaaaatagtccctagccccacttcattgatgatttggcgcatttttgcatatgtggcattagctgact 23469859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 45638897 - 45638863
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  45638897 ttaggctaaaatatggttttggtccctgcaaatat 45638863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 12360601 - 12360634
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  12360601 taggctaaaatatggttttggtccctgcaaatat 12360634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 16026940 - 16026907
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  16026940 taggctaaaatatggttttggtccctgcaaatat 16026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 26324583 - 26324616
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  26324583 taggctaaaatatgattttggtccctgcaaatat 26324616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 32035790 - 32035757
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  32035790 taggctaaaatatggttttggtccctgcaaatat 32035757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 35056896 - 35056863
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  35056896 taggctaaaatatgattttggtccctgcaaatat 35056863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 36912851 - 36912884
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  36912851 taggctaaaatatggttttggtccctgcaaatat 36912884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 39747837 - 39747804
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  39747837 taggctaaaatatggttttggtccctgcaaatat 39747804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 42482977 - 42483010
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  42482977 taggctaaaatatggttttggtccctgcaaatat 42483010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 47819230 - 47819263
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  47819230 taggctaaaatatggttttggtccctgcaaatat 47819263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 48856302 - 48856347
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    |||||||||| |||||||||||||| |||||||| ||| |||||||    
T  48856302 ttttgttttttaaaatagtccttggccccactttattgatgatttg 48856347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 50429215 - 50429178
Alignment:
Q  72 tctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  50429215 tctttaggctaaaatatgattttagtccctgcaaatat 50429178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 3247197 - 3247229
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  3247197 aggctaaaatatggttttggtccctgcaaatat 3247229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 7867358 - 7867326
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  7867358 aggctaaaatatggttttggtccctgcaaatat 7867326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 10631529 - 10631497
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  10631529 aggctaaaatatggttttggtccctgcaaatat 10631497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 12360969 - 12360937
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  12360969 aggctaaaatatggttttggtccctgcaaatat 12360937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 13074121 - 13074173
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||||||||||  | |||||| |||||||||||| ||||||| ||||||||||    
T  13074121 ggctaaaatattctcttggtctctgcaaatatagcgaatttgagttttggtcc 13074173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 15526363 - 15526331
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  15526363 aggctaaaatatggttttggtccctgcaaatat 15526331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 19720711 - 19720743
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  19720711 aggctaaaatatggttttggtccctgcaaatat 19720743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 24507844 - 24507812
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  24507844 aggctaaaatatggttttggtccctgcaaatat 24507812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 24654168 - 24654136
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  24654168 aggctaaaatatggttttggtccctgcaaatat 24654136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 30322928 - 30322960
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  30322928 aggctaaaatatggttttggtccctgcaaatat 30322960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 33000670 - 33000638
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  33000670 aggctaaaatatggttttggtccctgcaaatat 33000638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 33045691 - 33045659
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  33045691 aggctaaaatatggttttggtccctgcaaatat 33045659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 33234545 - 33234577
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  33234545 aggctaaaatatggttttggtccctgcaaatat 33234577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 35910651 - 35910706
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||||| |||||||||||||   |||| |||||||||||||    
T  35910651 taggctaaaatatgattttggt-cctgcaaatatagcatatttcggttttggtccct 35910706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 38164296 - 38164264
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  38164296 aggctaaaatatggttttggtccctgcaaatat 38164264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 42483272 - 42483240
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  42483272 aggctaaaatatggttttggtccctgcaaatat 42483240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 47819597 - 47819565
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  47819597 aggctaaaatatggttttggtccctgcaaatat 47819565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 7e-32; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 79 - 269
Target Start/End: Complemental strand, 31489993 - 31489803
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgttttt 178  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||| || ||||         |||||||||  ||||||    |||| |||||    
T  31489993 gctaaaatatgtttttggtccctgcaaatataacgagtttgggttttggtccttagtaaaaaaaaaattgaaaatcgttattgcaattttttttattttt 31489894  T
Q  179 aaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcat 269  Q
     ||||||||||     |||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  31489893 taaaatagtccccaaacccactttcttgctgatttgtctcatttttgcctatgtggcatatgctaactctgcaaacctgtacatgtggcat 31489803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 75 - 281
Target Start/End: Complemental strand, 32197971 - 32197763
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna--gaaaatcgtccttgcaaaacatttt 172  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |  ||||           ||||| ||||| |||||||  ||||    
T  32197971 ttaggctaaaatatgcttttggtccctgcaaatatagcgaatttgggttttggtccttggtaaaaaaaaaattttgaaaagcgtccctgcaaaatttttt 32197872  T
Q  173 gtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatcca 272  Q
    |||||| |||||||||| ||| |||| ||| | | ||||||||| ||||| ||| ||  ||||| ||||||||  |||||||||||||||||||||||||    
T  32197871 gttttttaaaatagtccctggtcccattttttcgatgatttgtcacatttatgcatacttggcagatgctgacggtgcaaacatgtacatgtggcatcca 32197772  T
Q  273 ggtggcaat 281  Q
    |||| ||||    
T  32197771 ggtgacaat 32197763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 39619760 - 39619652
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggca 268  Q
    |||||||||| |||||||||||||| | |||||||||  ||||||||| ||||| ||| ||||||||||  ||||||||||||||| |||||||||| ||    
T  39619760 ttttgttttttaaaatagtccttggactcactttcttaatgatttgtcacatttgtgcatatgtggcattagctgactatgcaaacttgtacatgtgtca 39619661  T
Q  269 tccaggtgg 277  Q
    |||| ||||    
T  39619660 tccatgtgg 39619652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 24195606 - 24195746
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccc---taataaannnnnnnnagaaaatcgtccttgcaaaacattttg 173  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||   ||| |||         ||||  | |||||||||||  |||||    
T  24195606 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttgctccctggtaaaaaaaaaaaaattgaaatccatccttgcaaaattttttg 24195705  T
Q  174 tttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    ||||| |||| ||||||||| ||||||||||||||||||||    
T  24195706 ttttttaaaaaagtccttggccccactttcttgttgatttg 24195746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 476 - 537
Target Start/End: Original strand, 31488943 - 31489004
Alignment:
Q  476 tcaaatcaaaattctggaaaactaaattcatcttcgtgcaagatcttcatcttcatcaattc 537  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  31488943 tcaaatcaaaattctggaaaattaaattcatcttcgagcaacatcttcatcttcatcaattc 31489004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 31848206 - 31848149
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  31848206 ttaggctaaaatatgtttttagtccctgcaaatatagcgaatttgggttttggtccct 31848149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 32544830 - 32544657
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnn-agaaaatcgtccttgcaaaacattttgttttta 179  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||| |  ||||         | ||||  |||| || |||   ||||||||||     
T  32544830 taaaatatgattttggtccctgcaaatatagcgaatttgggttttggtccttggtaaataaaaaattaaaaaaatgtccctgtaaatttttttgtttttt 32544731  T
Q  180 aaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaa 253  Q
    ||||||||| ||||| | ||||||||| |||||||| | |||| ||||||||||||| ||| ||||||||||||    
T  32544730 aaaatagtcattgggtctactttcttgctgatttgtttaatttttgcctatgtggcagatgatgactatgcaaa 32544657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 36749307 - 36749147
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgtt 175  Q
    ||||||||||||||||||||||  |||||||||   || |||| ||||||||||||| ||||          |||| || ||| ||||||| ||||||||    
T  36749307 aggctaaaatatgtttttggtcattgcaaatatgacgagtttgagttttggtccctagtaaatttttgttttgaaattcatccctgcaaaaaattttgtt 36749208  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    ||| ||||||||| ||||  ||||||||| | ||||||||||||||||||| |||||||||    
T  36749207 ttttaaaatagtctttggatccactttctcgctgatttgtctcatttctgcatatgtggca 36749147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 42255882 - 42255794
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctga 244  Q
    ||||||||||| ||||||||||| |||||||||  | | | |||||||||| |||||||||||||||| |||||||||||| |||||||    
T  42255882 tccttgcaaaatattttgttttttaaaatagtctctagacacactttcttgctgatttgtctcatttcagcctatgtggcagatgctga 42255794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 31488683 - 31488763
Alignment:
Q  200 tttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtggcaa 280  Q
    ||||||| ||||||||| |||||| ||| ||||||| ||||| |||||||||||||| ||||| ||||||| |||||||||    
T  31488683 tttcttgctgatttgtcccatttcagcccatgtggcttatgccgactatgcaaacatatacatatggcatctaggtggcaa 31488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 81 - 236
Target Start/End: Complemental strand, 12385763 - 12385608
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgtttttaa 180  Q
    ||||||||| ||||||||||||||||||||| || ||||| |||||||||||  ||||         |||| || ||| |||||||  |||||||||| |    
T  12385763 taaaatatgattttggtccctgcaaatatagcgagtttggattttggtccctggtaaaaaaaaatttgaaattcatccctgcaaaattttttgtttttta 12385664  T
Q  181 aaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    |||| |||||||| |||||||| ||| || ||||   ||||||| |||||||||||    
T  12385663 aaattgtccttggccccactttattgatgttttggtgcatttctacctatgtggca 12385608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 13418949 - 13419004
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||    
T  13418949 aggctaaaatatgtttttggtccctgcaaatattgcgaatttgggtattggtccct 13419004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 24197164 - 24197025
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaa-tcgtccttgcaaaacattttgt 174  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||  ||||          |||| || |||||||||||  ||||||    
T  24197164 taggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggttcctggtaaaaaaaaattttaaaattcatccttgcaaaattttttgt 24197065  T
Q  175 ttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    |||| |||| |||| |||  ||||||||||||||||||||    
T  24197064 tttttaaaaaagtcattgaccccactttcttgttgatttg 24197025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 37784072 - 37784139
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    |||| ||||| |||||||||||||| || ||||||||| |||||||||||||| ||||||||||||||    
T  37784072 ttttattttttaaaatagtccttggaccaactttcttgctgatttgtctcattcctgcctatgtggca 37784139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 41693644 - 41693699
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  41693644 aggctaaaatatgtttttgatccctgcaaatatggcgaatttgggttttggtccct 41693699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 5611570 - 5611512
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||    
T  5611570 tttaggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttcgtccct 5611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 32196685 - 32196743
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||    
T  32196685 gctaaaatatgtttttggtccctgcaaatatagcgtatttggattttggtccctgataa 32196743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 245
Target Start/End: Original strand, 36748198 - 36748365
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna--gaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||||||| | ||||           |||| || ||  |||||||  |||||||    
T  36748198 ggctaaaatatgtttttggtccctgcaaatat-gagagtttgggttttggtccc-agtaaatttttttttttgaaattcatctctgcaaaattttttgtt 36748295  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgac 245  Q
    ||  |||||||||  ||| |||||||| ||| ||||||||||||||| ||||||||||||| ||||||||    
T  36748296 ttctaaaatagtctctggacccacttttttgctgatttgtctcatttttgcctatgtggcagatgctgac 36748365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 39618747 - 39618847
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggca 268  Q
    |||||| ||| |||||||||||||| |||||||||||| |||||||||| |||| || ||||||||||  |||||| | || ||  || |||||||||||    
T  39618747 ttttgtattttaaaatagtccttggacccactttcttgatgatttgtcttatttttgtctatgtggcaggtgctgattgtgtaattatatacatgtggca 39618846  T
Q  269 t 269  Q
    |    
T  39618847 t 39618847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 42255050 - 42255122
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgc 241  Q
    |||||||||| ||||||||| ||||  ||||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  42255050 ttttgttttttaaaatagtcattggatccactttcttgctgatttgtcccatttctgcatatgtggcagatgc 42255122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 554244 - 554402
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    ||||||||||||  | ||||||||||||||||||| || ||||||||||||||||  |||||        | ||| || ||| |||| |   ||||||||    
T  554244 aggctaaaatataatattggtccctgcaaatatagcgagtttgggttttggtccccgataaaaaaaattta-aaattcatccatgcagatttttttgttt 554342  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    ||||||||||| | | | |||||| ||||||||||||| ||||||| ||| |||||||||    
T  554343 ttaaaaatagttcctagacccactgtcttgttgatttggctcatttttgcttatgtggca 554402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 31853549 - 31853608
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||||||||||||||||||||| | || ||||| |||||||||||| ||||    
T  31853549 gctaaaatatgtttttggtccctgcaaatattgtgagtttggattttggtccctagtaaa 31853608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 35212067 - 35212122
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||    
T  35212067 aggctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccct 35212122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 17066421 - 17066479
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||| ||||  ||||||||||||||| || |||||||||||||||||    
T  17066421 tttaggctaaaatatgcttttaatccctgcaaatatagcgagtttgggttttggtccct 17066479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 38742184 - 38742234
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccc 131  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  38742184 taaaatatgtttttagtccctgcaaatatagcgagtttgggttttggtccc 38742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 41695018 - 41694960
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||  ||||||||||||||| || |||| ||||||||||||    
T  41695018 tttaggctaaaatatgtttttcatccctgcaaatatagcgagtttgagttttggtccct 41694960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 12933417 - 12933473
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||||||||||||||||||| || ||||  |||||||||||    
T  12933417 taggctaaaatatgcttttggtccctgcaaatatagtgagtttgaattttggtccct 12933473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 43869965 - 43869917
Alignment:
Q  84 aatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||    
T  43869965 aatatggttttggtccctgcaaatatagccaatttgggttttggtccct 43869917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 12932785 - 12932752
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||||||||||||||||||||||    
T  12932785 taggctaaaatatgtttttggtccctgcaaatat 12932752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 30512040 - 30512105
Alignment:
Q  73 ctttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||| |||||||||| |||||| ||| ||||||||||| ||||||| |||||||| ||| |||||    
T  30512040 ctttaagctaaaatatatttttgttccttgcaaatatagcgaatttgagttttggtacctgataaa 30512105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 40576764 - 40576817
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtc 129  Q
    |||||||||||||| |||||||||||||||||||   |||||||| ||||||||    
T  40576764 taggctaaaatatgcttttggtccctgcaaatatgacgaatttggattttggtc 40576817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 39619852 - 39619800
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    |||||||||||||| ||||||||| ||||||||| | || |||||||||||||    
T  39619852 taggctaaaatatgcttttggtccatgcaaatatggcgagtttgggttttggt 39619800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 3975842 - 3975807
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  3975842 tttaggctaaaatatggttttggtccctgcaaatat 3975807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 11217127 - 11217076
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||| ||||||||||||||||||||| || ||||  |||||||||||    
T  11217127 taaaatatgcttttggtccctgcaaatatagcgagtttgaattttggtccct 11217076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 11767279 - 11767244
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  11767279 tttaggctaaaatatggttttggtccctgcaaatat 11767244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 23399608 - 23399643
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  23399608 tttaggctaaaatatggttttggtccctgcaaatat 23399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 25988381 - 25988416
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  25988381 tttaggctaaaatatggttttggtccctgcaaatat 25988416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 35838341 - 35838306
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  35838341 tttaggctaaaatatggttttggtccctgcaaatat 35838306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 41054240 - 41054205
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  41054240 tttaggctaaaatatggttttggtccctgcaaatat 41054205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 42254957 - 42255012
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||| |||||||||||| |||||| | || |||| ||||||||||||    
T  42254957 aggctaaaatatgcttttggtccctgtaaatatggcgagtttgagttttggtccct 42255012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 46759654 - 46759689
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  46759654 tttaggctaaaatatggttttggtccctgcaaatat 46759689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 29198301 - 29198335
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||||| ||||||||||||||||||||    
T  29198301 taggctaaaatatggttttggtccctgcaaatata 29198335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 31846982 - 31847036
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    |||||| ||||||||| ||||||||||||||||||||   ||||||| |||||||    
T  31846982 tttaggttaaaatatgcttttggtccctgcaaatatatctaatttggattttggt 31847036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 1614557 - 1614590
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  1614557 taggctaaaatatggttttggtccctgcaaatat 1614590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 8144660 - 8144627
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  8144660 taggctaaaatatggttttggtccctgcaaatat 8144627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 23676454 - 23676421
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  23676454 taggctaaaatatggttttggtccctgcaaatat 23676421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 26878073 - 26878040
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  26878073 taggctaaaatatggttttggtccctgcaaatat 26878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 28262711 - 28262744
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  28262711 taggctaaaatatggttttggtccctgcaaatat 28262744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 29198664 - 29198631
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  29198664 taggctaaaatatggttttggtccctgcaaatat 29198631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 44568325 - 44568358
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatata 110  Q
    ||||||||||||| ||||||||||||||||||||    
T  44568325 aggctaaaatatggttttggtccctgcaaatata 44568358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 48192490 - 48192457
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  48192490 taggctaaaatatggttttggtccctgcaaatat 48192457  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 1614905 - 1614873
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  1614905 aggctaaaatatggttttggtccctgcaaatat 1614873  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 2945846 - 2945814
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||||||||||||| |||||||    
T  2945846 aggctaaaatatgtttttggtccctacaaatat 2945814  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 3975548 - 3975580
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  3975548 aggctaaaatatggttttggtccctgcaaatat 3975580  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 5233807 - 5233839
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  5233807 aggctaaaatatggttttggtccctgcaaatat 5233839  T

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Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 5610159 - 5610203
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggtttt 125  Q
    ||||||||| ||||| ||||||||||||||  |||||||||||||    
T  5610159 taaaatatgcttttgatccctgcaaatataacgaatttgggtttt 5610203  T

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Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 8144294 - 8144326
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  8144294 aggctaaaatatggttttggtccctgcaaatat 8144326  T

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Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 9659690 - 9659658
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  9659690 aggctaaaatatggttttggtccctgcaaatat 9659658  T

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Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 14543709 - 14543741
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  14543709 aggctaaaatatggttttggtccctgcaaatat 14543741  T

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Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 23399977 - 23399945
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  23399977 aggctaaaatatggttttggtccctgcaaatat 23399945  T

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Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 25046303 - 25046247
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||||||||||||||| ||||||||| ||||||||| | || ||| | |||||||||    
T  25046303 tttaggctaaaatatgattttggtccttgcaaatatggcgagtttagattttggtcc 25046247  T

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Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 25092159 - 25092191
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  25092159 aggctaaaatatggttttggtccctgcaaatat 25092191  T

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Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 25092549 - 25092517
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  25092549 aggctaaaatatggttttggtccctgcaaatat 25092517  T

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Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 25988750 - 25988718
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  25988750 aggctaaaatatggttttggtccctgcaaatat 25988718  T

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Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 27458398 - 27458430
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  27458398 aggctaaaatatggttttggtccctgcaaatat 27458430  T

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Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 28462685 - 28462633
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||| |||||||| ||||||||||   |||||||||||||| |||||    
T  28462685 ctaaaatatgcttttggtctctgcaaatatgacgaatttgggttttgatccct 28462633  T

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Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 35837923 - 35837955
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  35837923 aggctaaaatatggttttggtccctgcaaatat 35837955  T

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Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 36687264 - 36687232
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  36687264 aggctaaaatatgattttggtccctgcaaatat 36687232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 36892876 - 36892812
Alignment:
Q  170 tttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtgg 234  Q
    ||||||||| ||||||||| |||| |||||||  ||  ||||||||| |||||||||||| ||||    
T  36892876 tttgttttttaaaatagtcattggccccacttatttactgatttgtcacatttctgcctacgtgg 36892812  T

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Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 41053841 - 41053873
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  41053841 aggctaaaatatggttttggtccctgcaaatat 41053873  T

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Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 43065999 - 43066051
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    |||| ||||||||||||||  ||||||||||||||| || |||| ||||||||    
T  43065999 taggttaaaatatgttttttatccctgcaaatatagcgagtttgagttttggt 43066051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 45228919 - 45228887
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  45228919 aggctaaaatatggttttggtccctgcaaatat 45228887  T

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Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 46828943 - 46828975
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  46828943 aggctaaaatatggttttggtccctgcaaatat 46828975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 48852443 - 48852475
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  48852443 aggctaaaatatggttttggtccctgcaaatat 48852475  T

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Target: scaffold0517 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 276
Target Start/End: Original strand, 10315 - 10514
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgttt 176  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |  ||||          ||||| ||||| |||||||  ||||||||    
T  10315 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaaaaaaattttttgaaaaacgtccctgcaaaattttttgttt 10414  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtg 276  Q
    || |||||||||| ||| |||||||| | | ||||||||| ||||| ||| ||  ||||| ||||||||  |||||||||||||||||||||||||||||    
T  10415 tttaaaatagtccctggtcccactttttcgatgatttgtcacatttatgcatacttggcagatgctgacggtgcaaacatgtacatgtggcatccaggtg 10514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 11582 - 11527
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  11582 aggctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccct 11527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 52403090 - 52402982
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggca 268  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||| ||||| ||| ||||||||||  ||||||||||||||| |||||||||| ||    
T  52403090 ttttgttttttaaaatagtccttggacccactttcttgatgatttgtcacatttgtgcatatgtggcattagctgactatgcaaacttgtacatgtgtca 52402991  T
Q  269 tccaggtgg 277  Q
    |||| ||||    
T  52402990 tccatgtgg 52402982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 42446524 - 42446695
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgt 174  Q
    |||||||||||||| ||||||||||||||||||| | || ||||||||||||||  || ||||          |||| || ||| ||||||| |||||||    
T  42446524 taggctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtcgatagtaaaagaaatttttgaaattcatccctgcaaaaaattttgt 42446623  T
Q  175 ttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||| |||||||||||| | |||| |||||||||||||||||| ||||| |||||||||||| |||||||||    
T  42446624 tttttaaaatagtcctttgacccaatttcttgttgatttgtcttatttcagcctatgtggcagatgctgact 42446695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 42447763 - 42447677
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||  |||||||||| |||||||||||||| |||||||||||| ||||||||| ||||| |||||||||| || |||||||||    
T  42447763 tgcaaaattttttgttttttaaaatagtccttggacccactttcttgctgatttgtcccatttttgcctatgtgacagatgctgact 42447677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 54437528 - 54437471
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcccta 133  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  54437528 taggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttggtcccta 54437471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 46026072 - 46026131
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcccta 133  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  46026072 tttaggctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtcccta 46026131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 47433871 - 47433814
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  47433871 ttaggctaaaatatggttttggtccctgcaaatatagcgaatttgagttttggtccct 47433814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 20488368 - 20488420
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  20488368 ctaaaatatgtttttggtccctgcaaatatggtgaatttgggttttggtccct 20488420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 39820665 - 39820609
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  39820665 taggctaaaatatggttttggtccctgcaaatatagcgagtttgggttttggtccct 39820609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 52401016 - 52401071
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||| | || |||||||||||||||||    
T  52401016 aggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccct 52401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 53121301 - 53121356
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  53121301 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccct 53121356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 20585707 - 20585649
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| |||||||||||    
T  20585707 tttaggctaaaatatgtttttgatccctgcaaatatagcgagtttggattttggtccct 20585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 52403187 - 52403129
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||| ||||||||||||||||||| | || |||||||||||||||||    
T  52403187 tttaggctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtccct 52403129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 52707533 - 52707595
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  52707533 ttaggttaaaatatgtttttggtccttgcaaatatagcgaatttgagttttggtccctgataa 52707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 40477434 - 40477378
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcccta 133  Q
    ||||||||||||| ||||||||||||||||||||  || ||||||||||||||||||    
T  40477434 aggctaaaatatgattttggtccctgcaaatataacgagtttgggttttggtcccta 40477378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 281
Target Start/End: Original strand, 43641143 - 43641347
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    |||||||||||| |||| |||||||||||||||| || ||||| || ||||||||  | |||         ||||| |||||||||||||  || |||||    
T  43641143 ggctaaaatatgcttttagtccctgcaaatatagcgagtttggattatggtccctggtaaaaaaaagttttgaaaaacgtccttgcaaaattttatgttt 43641242  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtg 276  Q
    || |||||||||| ||  | |||||||||||||||||| | |||||   |  |||||| |  |||||||| || |||| |||| |||||||||||| |||    
T  43641243 tttaaaatagtccctgatctcactttcttgttgatttggcacattttctctcatgtggtaggtgctgactgtgtaaacttgtatatgtggcatccaagtg 43641342  T
Q  277 gcaat 281  Q
    |||||    
T  43641343 gcaat 43641347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 40476222 - 40476281
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| ||||    
T  40476222 gctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtctctagtaaa 40476281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 51004140 - 51004311
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa-nnnnnnnnagaaaatcgtccttgcaaaacattttgt 174  Q
    ||||||||||||||||||| | ||||| |||||| | |||||||||||||||||||  |||||          |||| || ||| |||||||  ||||||    
T  51004140 taggctaaaatatgtttttagaccctgtaaatatggcgaatttgggttttggtcccggataaattttatttttgaaattcatccctgcaaaattttttgt 51004239  T
Q  175 ttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||| ||||||||||||   |||||||| ||| ||||||| | ||||| |||||| |||||||  |||||||    
T  51004240 tttttaaaatagtccttaaccccactttattgatgatttggcacatttatgcctacgtggcattcgctgact 51004311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 52708676 - 52708625
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtc 129  Q
    |||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  52708676 ggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtc 52708625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 32637167 - 32637077
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    ||||||||||| ||||||||||| |||||||||| ||  |||||||| ||| ||||||| | ||||| ||| ||||||||||  |||||||    
T  32637167 tccttgcaaaatattttgttttttaaaatagtccctgaccccactttattgatgatttggcgcatttttgcatatgtggcattagctgact 32637077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 45268633 - 45268575
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||  |||||||||||||||  | |||||||||||||||||    
T  45268633 tttaggctaaaatatgtttttaatccctgcaaatatagcaagtttgggttttggtccct 45268575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 3263332 - 3263243
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgac 245  Q
    |||||||||||  |||||||||| |||||||||| |   |||||||||||| | ||||| | || |||||||||||||||| ||||||||    
T  3263332 tccttgcaaaattttttgttttttaaaatagtccctaaccccactttcttgcttatttggcacagttctgcctatgtggcagatgctgac 3263243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 20489416 - 20489363
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||   || |||||||||||||||||    
T  20489416 gctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccct 20489363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 45267306 - 45267359
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||| ||||||||||||||| || |||| ||||||||||||    
T  45267306 gctaaaatatgtttttgatccctgcaaatatagcgagtttgagttttggtccct 45267359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 20585491 - 20585401
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgta 259  Q
    |||||||||| ||||  |||| ||  |||||||||||| ||||||| ||||||| ||| |||||||||| |||||||| | ||||| ||||    
T  20585491 ttttgttttttaaaaaggtccctgaacccactttcttgctgatttgactcatttttgcttatgtggcatgtgctgactgtacaaacttgta 20585401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 22508733 - 22508787
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||| ||||||||| ||||||||||||||||||||| || |||| ||||||||||    
T  22508733 taggttaaaatatgattttggtccctgcaaatatagcgagtttgagttttggtcc 22508787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 46027477 - 46027339
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcg-tccttgcaaaacattttgtt 175  Q
    ||||||||||||  ||||||||||||||||||||| || ||||  |||||||||||  ||||           |||||| ||||||||||| | ||||||    
T  46027477 aggctaaaatatacttttggtccctgcaaatatagcgagtttgaattttggtccctggtaaaaaaaagttttgaaatcggtccttgcaaaaaaatttgtt 46027378  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    ||| |||| ||||| || ||||||||||||| |||||||    
T  46027377 ttttaaaacagtccctgagcccactttcttgctgatttg 46027339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 46104343 - 46104397
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||||||||||||||||||| || |||| ||||| ||||||    
T  46104343 ggctaaaatatgattttggtccctgcaaatatagcgagtttgagtttttgtccct 46104397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 48033058 - 48033112
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||| ||||||||| | || ||||| |||||||||||    
T  48033058 ggctaaaatatgtttttggtccttgcaaatatggtgagtttggattttggtccct 48033112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 976777 - 976834
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||  ||||| ||||||    
T  976777 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttaagttttagtccct 976834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 32635673 - 32635754
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcat 237  Q
    ||||||||||| ||||||||||| |||||||||| | | |||||||| ||| ||||||| | ||||| | | ||||||||||    
T  32635673 tccttgcaaaatattttgttttttaaaatagtccatagccccactttattgatgatttggcgcatttttacatatgtggcat 32635754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 38505642 - 38505585
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccc 131  Q
    |||||||||||||||| ||||| ||||||||||||| | || |||| |||||||||||    
T  38505642 tttaggctaaaatatgcttttgctccctgcaaatatggcgagtttgagttttggtccc 38505585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 9855178 - 9855238
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    |||||||||||| ||||| |||||| |||||||| || ||||| |||||||||||| ||||    
T  9855178 ggctaaaatatgattttgatccctgtaaatatagcgagtttggattttggtccctagtaaa 9855238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 15782765 - 15782721
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggtttt 125  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||    
T  15782765 taaaatatgtttttggtccctacaaatatagcgaatttgagtttt 15782721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 12740903 - 12740938
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  12740903 tttaggctaaaatatggttttggtccctgcaaatat 12740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 20405226 - 20405191
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatata 110  Q
    ||||||||||||||| ||||||||||||||||||||    
T  20405226 ttaggctaaaatatggttttggtccctgcaaatata 20405191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 32635593 - 32635648
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||| |||| || |||||||| || |||||||||||||||||    
T  32635593 aggctaaaatatattttttgtccttgtaaatatagcgagtttgggttttggtccct 32635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 39132910 - 39132875
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  39132910 tttaggctaaaatatggttttggtccctgcaaatat 39132875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 40545560 - 40545595
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  40545560 tttaggctaaaatatggttttggtccctgcaaatat 40545595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 44507859 - 44507808
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    ||||||||||||| ||||||||||||||||||||| || ||||  |||||||    
T  44507859 aggctaaaatatgattttggtccctgcaaatatagcgagtttgaattttggt 44507808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 47005523 - 47005488
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  47005523 tttaggctaaaatatggttttggtccctgcaaatat 47005488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 51550450 - 51550415
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  51550450 tttaggctaaaatatggttttggtccctgcaaatat 51550415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 52342191 - 52342226
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  52342191 tttaggctaaaatatggttttggtccctgcaaatat 52342226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 4705681 - 4705735
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||| ||||||||||||| | || ||| |||||||||||||    
T  4705681 ggctaaaatatgcttttgatccctgcaaatatggcgagtttaggttttggtccct 4705735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 4705766 - 4705852
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||  |||||||||| |||||||||||||| || |||||  || ||||||| | ||||| |||||| |||||||  |||||||    
T  4705766 tgcaaaattttttgttttttaaaatagtccttggcccaactttactgatgatttggcacatttatgcctacgtggcattcgctgact 4705852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 11914888 - 11914842
Alignment:
Q  82 aaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    ||||| || |||| |||||||||||||||| ||||||||||||||||    
T  11914888 aaaatgtgcttttagtccctgcaaatatagcgaatttgggttttggt 11914842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 14788441 - 14788471
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||||||||||||||||    
T  14788441 gctaaaatatgtttttggtccctgcaaatat 14788471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 28552386 - 28552352
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  28552386 ttaggctaaaatatggttttggtccctgcaaatat 28552352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 30106222 - 30106188
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||||| ||||||||||||||||||||    
T  30106222 taggctaaaatatggttttggtccctgcaaatata 30106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 39819395 - 39819449
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    |||||||  |||||||||| |||| ||||||||| |||||||||||| |||||||    
T  39819395 tgcaaaattttttgtttttcaaaaaagtccttggccccactttcttgctgatttg 39819449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 46104428 - 46104506
Alignment:
Q  168 attttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    ||||||||||| |||||||||| | ||||||||||  || ||||||| | |||||  || ||||||||| |||||||||    
T  46104428 attttgttttttaaaatagtccctaggcccactttactgatgatttggcgcattttcgcatatgtggcagatgctgact 46104506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 474410 - 474377
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  474410 taggctaaaatatggttttggtccctgcaaatat 474377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 9262157 - 9262124
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  9262157 taggctaaaatatggttttggtccctgcaaatat 9262124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 9603921 - 9603888
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  9603921 taggctaaaatatggttttggtccctgcaaatat 9603888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 15782216 - 15782261
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttt 124  Q
    |||||||||| |||||||||||||||||||||| || |||| ||||    
T  15782216 gctaaaatatatttttggtccctgcaaatatagcgagtttgagttt 15782261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 20802847 - 20802896
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttg 126  Q
    |||||||||||||||| | |||||| ||||||||| || |||||||||||    
T  20802847 aggctaaaatatgtttctagtccctacaaatatagcgagtttgggttttg 20802896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 28552019 - 28552052
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  28552019 taggctaaaatatggttttggtccctgcaaatat 28552052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 29490745 - 29490712
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  29490745 taggctaaaatatggttttggtccctgcaaatat 29490712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 32637246 - 32637197
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    ||||||||||| |||||||||||| |||| ||| || |||||||||||||    
T  32637246 gctaaaatatgcttttggtccctgtaaatgtagcgagtttgggttttggt 32637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 41780868 - 41780807
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||||||||| |||||  ||||||||  | ||||||||| |||||||| ||||    
T  41780868 aggctaaaatatgtttttgatccctaaaaatatagcaagtttgggtttcggtccctagtaaa 41780807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 45002019 - 45002052
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  45002019 taggctaaaatatggttttggtccctgcaaatat 45002052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 47336583 - 47336550
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  47336583 taggctaaaatatggttttggtccctgcaaatat 47336550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 48035790 - 48035737
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||| |||||||||||||   || ||||| |||||||||||    
T  48035790 gctaaaatatgtttttgatccctgcaaatatgacgagtttggattttggtccct 48035737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 51550080 - 51550113
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  51550080 taggctaaaatatggttttggtccctgcaaatat 51550113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 52401109 - 52401162
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcattt 222  Q
    |||||||||| |||||||||| ||| |||||||||||| |||||| ||| ||||    
T  52401109 ttttgttttttaaaatagtccatggacccactttcttgatgatttatcttattt 52401162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 54608865 - 54608832
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  54608865 taggctaaaatatggttttggtccctgcaaatat 54608832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 474043 - 474075
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  474043 aggctaaaatatggttttggtccctgcaaatat 474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 977905 - 977853
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||| ||||||| |||||||||||||||||||   || |||||||||||||||    
T  977905 ggctgaaatatgcttttggtccctgcaaatatgacgagtttgggttttggtcc 977853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 1721453 - 1721421
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  1721453 aggctaaaatatggttttggtccctgcaaatat 1721421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 3416579 - 3416660
Alignment:
Q  163 aaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||| ||||||||||  |||||| || ||||||||||||| ||| | || |||||||||| ||| ||||||||| ||| |||||    
T  3416579 aaaaaattttgtttt--aaaataatcattgggcccacttttttgctcatgtgtctcatttatgcatatgtggcagatgttgact 3416660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 3417852 - 3417820
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||||||||||| ||||||    
T  3417852 aggctaaaatatgtttttggtccctgtaaatat 3417820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 12741272 - 12741240
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  12741272 aggctaaaatatggttttggtccctgcaaatat 12741240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 14772210 - 14772242
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  14772210 aggctaaaatatggttttggtccctgcaaatat 14772242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 15782686 - 15782634
Alignment:
Q  162 caaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    ||||| ||||||||||| |||| ||| ||||  ||||||||||||||||||||    
T  15782686 caaaatattttgttttttaaaaaagttcttgaccccactttcttgttgatttg 15782634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 19844582 - 19844550
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  19844582 aggctaaaatatggttttggtccctgcaaatat 19844550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 21553888 - 21553920
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  21553888 aggctaaaatatggttttggtccctgcaaatat 21553920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 25615974 - 25616006
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  25615974 aggctaaaatatggttttggtccctgcaaatat 25616006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 106
Target Start/End: Original strand, 30128280 - 30128312
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaa 106  Q
    |||||||||||||||| ||||||||||||||||    
T  30128280 tttaggctaaaatatggttttggtccctgcaaa 30128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 31480135 - 31480167
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  31480135 aggctaaaatatggttttggtccctgcaaatat 31480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 32119585 - 32119553
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  32119585 aggctaaaatatgattttggtccctgcaaatat 32119553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 35177254 - 35177286
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  35177254 aggctaaaatatgattttggtccctgcaaatat 35177286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 37845403 - 37845455
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    |||| |||||||||||||||||| |||||||||||| || ||||  |||||||    
T  37845403 taggttaaaatatgtttttggtctctgcaaatatagtgagtttgtattttggt 37845455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 38232240 - 38232272
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  38232240 aggctaaaatatgattttggtccctgcaaatat 38232272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 39819314 - 39819366
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||| |||| |||||||||||||||| || ||||  |||||||||||    
T  39819314 ctaaaatatggttttagtccctgcaaatatagcgagtttgaattttggtccct 39819366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 109
Target Start/End: Original strand, 42444040 - 42444068
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||||||||||||||    
T  42444040 taaaatatgtttttggtccctgcaaatat 42444068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 45267384 - 45267464
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    ||| |||||||  ||||||||||  ||||||||| |   |||||||||||| |||||||||  |||| |||||||||||||    
T  45267384 tccctgcaaaattttttgttttttgaaatagtccctatacccactttcttgatgatttgtccaatttttgcctatgtggca 45267464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 47005153 - 47005185
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  47005153 aggctaaaatatggttttggtccctgcaaatat 47005185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 47114486 - 47114518
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  47114486 aggctaaaatatgattttggtccctgcaaatat 47114518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 47336227 - 47336259
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  47336227 aggctaaaatatggttttggtccctgcaaatat 47336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 50563013 - 50563081
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcat 237  Q
    |||||||||| |||||||||  | | |||||||||||||||||||| | ||||| ||| ||||| ||||    
T  50563013 ttttgttttttaaaatagtctctagtcccactttcttgttgatttggcacatttttgcttatgtagcat 50563081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 53113442 - 53113474
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  53113442 aggctaaaatatggttttggtccctgcaaatat 53113474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 54608517 - 54608549
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  54608517 aggctaaaatatggttttggtccctgcaaatat 54608549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 80 - 277
Target Start/End: Original strand, 17516164 - 17516362
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgttttt 178  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||||| |||||          |||  || ||  ||||||   |||| |||||    
T  17516164 ctaaaatatgtttttggtccctgcaaatatggtgagtttgggttttggtccctgataaattttttttttgaatttcatctctgcaaatttttttattttt 17516263  T
Q  179 aaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggtgg 277  Q
     |||||||||||||| |||||||||||| ||||||||| ||||| ||| ||||||||||   |||||||||||||| |||||||||| |||||| ||||    
T  17516264 taaaatagtccttggacccactttcttgatgatttgtcacatttgtgcatatgtggcattaactgactatgcaaacttgtacatgtgtcatccatgtgg 17516362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 253
Target Start/End: Complemental strand, 26421903 - 26421726
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    ||||||||| |||||||||||| |||||||||||| ||||||| ||||| ||||||  |||          ||||| ||||  ||||||   ||||||||    
T  26421903 aggctaaaacatgtttttggtctctgcaaatatagcgaatttgagttttagtccctggtaattttttttttgaaaaacgtctctgcaaatttttttgttt 26421804  T
Q  177 ttaaaaat-agtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaa 253  Q
    || ||||| |||| ||||  ||||||||||| ||||||||||||||| ||||||||| ||| ||| ||||||||||||    
T  26421803 tttaaaattagtcattggatccactttcttgctgatttgtctcatttttgcctatgtagcagatgatgactatgcaaa 26421726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 3276363 - 3276427
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  3276363 tttaggctaaaatatgtttttggtccctgcaaatatagcgaatttggattttagtccctagtaaa 3276427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 16995450 - 16995505
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  16995450 aggctaaaatatgtttttggtccctgcaaatataaagaatttgggttttggtccct 16995505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 20897556 - 20897502
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  20897556 ggctaaaatatggttttggtccctgcaaatatagtgaatttgggttttggtccct 20897502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 21953203 - 21953260
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  21953203 ttaggctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccct 21953260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 34998202 - 34998062
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct--aataaannnnnnnnagaaaatcgtccttgcaaaacattttg 173  Q
    |||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||   | |||         ||||  | |||||||||||  |||||    
T  34998202 taggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaaaaaaaaaaatttgaaatccatccttgcaaaattttttg 34998103  T
Q  174 tttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    |||||||||| ||||||||| |||||||||||| |||||||    
T  34998102 tttttaaaaaaagtccttggccccactttcttgctgatttg 34998062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 74 - 244
Target Start/End: Complemental strand, 17517372 - 17517201
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacatttt 172  Q
    |||||||||||||||||||||||||||||||||||| | || |||| ||||||||||||  | |||         |||  || ||| ||||||   ||||    
T  17517372 tttaggctaaaatatgtttttggtccctgcaaatatggcgagtttgagttttggtccctggtaaaaaaaaaaattgaatttcatccctgcaaattttttt 17517273  T
Q  173 gtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctga 244  Q
    |||||| |||||||| ||||  |||||||||||| |||||||| | |||| || |||||||||| |||||||    
T  17517272 gttttttaaaatagtacttgaacccactttcttgatgatttgttttatttttgtctatgtggcagatgctga 17517201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 20391217 - 20391268
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  20391217 taaaatatgcttttggtccctgcaaatatagtgaatttgggttttggtccct 20391268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 18810532 - 18810586
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  18810532 ggctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccct 18810586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 1972390 - 1972447
Alignment:
Q  68 aatatctttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggtttt 125  Q
    ||||| ||| ||||||||||||||||||||||||||||||| || |||||||||||||    
T  1972390 aatattttttggctaaaatatgtttttggtccctgcaaataaagcgaatttgggtttt 1972447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 1974211 - 1974157
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||    
T  1974211 ggctaaaatatgtttttgatccttgcaaatatagcgaatttgagttttggtccct 1974157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 21165246 - 21165300
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||||||||||||||||||| || |||| ||||||||||||    
T  21165246 ggctaaaatatgcttttggtccctgcaaatatagcgagtttgtgttttggtccct 21165300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 20895960 - 20896005
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggtttt 125  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  20895960 ctaaaatatgtttttggtccctgcaaatatagcgaatttgagtttt 20896005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 34995112 - 34995164
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  34995112 taggctaaaatatgcttttgatccctgcaaatatagcgaatttgagttttggt 34995164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 17000336 - 17000277
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    |||||||||||  ||||||||||||||||| ||| || ||||||||||||||||| ||||    
T  17000336 ggctaaaatatacttttggtccctgcaaatgtagtgagtttgggttttggtccctgataa 17000277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 26419609 - 26419688
Alignment:
Q  174 tttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaa 253  Q
    ||||| |||||||||| ||||| ||||||||||||||||||  ||||||   | ||||||||| ||||||| ||||||||    
T  26419609 ttttttaaaatagtccctgggcgcactttcttgttgatttggatcattttaacttatgtggcagatgctgagtatgcaaa 26419688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 29291358 - 29291413
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||| ||||||||| ||||||||| | || |||||||||||||||||    
T  29291358 aggctaaaatatgcttttggtccttgcaaatatggcgagtttgggttttggtccct 29291413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 20393327 - 20393281
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttt 124  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  20393327 ggctaaaatatgcttttgatccctgcaaatatagcgaatttgggttt 20393281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 1171707 - 1171650
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||||| ||||||||||||||  || ||||| ||||||||||| |||||    
T  1171707 taaaatatgtttttgatccctgcaaatataacgagtttggtttttggtccctgataaa 1171650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 1007120 - 1007155
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  1007120 tttaggctaaaatatggttttggtccctgcaaatat 1007155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 1170530 - 1170597
Alignment:
Q  168 attttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggc 235  Q
    |||||||||||||||||||||||| || ||||||| ||| || |||||| ||||| | | ||||||||    
T  1170530 attttgtttttaaaaatagtccttaggtccacttttttgctgttttgtcacatttttacttatgtggc 1170597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 6412214 - 6412249
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  6412214 tttaggctaaaatatggttttggtccctgcaaatat 6412249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 19129524 - 19129489
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  19129524 tttaggctaaaatatgattttggtccctgcaaatat 19129489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 19321135 - 19321100
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  19321135 tttaggctaaaatatggttttggtccctgcaaatat 19321100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 21994407 - 21994372
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  21994407 tttaggctaaaatatggttttggtccctgcaaatat 21994372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 22543722 - 22543687
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  22543722 tttaggctaaaatatggttttggtccctgcaaatat 22543687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 18024378 - 18024344
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  18024378 ttaggctaaaatatggttttggtccctgcaaatat 18024344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 20896030 - 20896072
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccacttt 202  Q
    |||||||  |||||||||| |||||||||||||||||||||||    
T  20896030 tgcaaaattttttgttttttaaaatagtccttgggcccacttt 20896072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 25439650 - 25439696
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttg 126  Q
    ||||||||||||||| |||||||||||||||  || |||||||||||    
T  25439650 ctaaaatatgtttttagtccctgcaaatataacgattttgggttttg 25439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 1007511 - 1007478
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  1007511 taggctaaaatatggttttggtccctgcaaatat 1007478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 3414385 - 3414418
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  3414385 taggctaaaatatggttttggtccctgcaaatat 3414418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 3969011 - 3968978
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  3969011 taggctaaaatatggttttggtccctgcaaatat 3968978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 8170153 - 8170120
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  8170153 taggctaaaatatggttttggtccctgcaaatat 8170120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 8680773 - 8680806
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||||||| ||||||||||||||    
T  8680773 taggctaaaatatgtttttagtccctgcaaatat 8680806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 10910966 - 10910933
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  10910966 taggctaaaatatggttttggtccctgcaaatat 10910933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 20467720 - 20467687
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  20467720 taggctaaaatatggttttggtccctgcaaatat 20467687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 21147402 - 21147435
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  21147402 taggctaaaatatggttttggtccctgcaaatat 21147435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 22543352 - 22543385
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  22543352 taggctaaaatatggttttggtccctgcaaatat 22543385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 25137359 - 25137326
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  25137359 taggctaaaatatggttttggtccctgcaaatat 25137326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 30253596 - 30253547
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtc 129  Q
    ||||||||||||||||||||||||||||| || || | || |||||||||    
T  30253596 ctaaaatatgtttttggtccctgcaaatacagcgagtatgagttttggtc 30253547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 3276355 - 3276323
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  3276355 aggctaaaatatggttttggtccctgcaaatat 3276323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 3968644 - 3968676
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  3968644 aggctaaaatatggttttggtccctgcaaatat 3968676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 6412580 - 6412548
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  6412580 aggctaaaatatggttttggtccctgcaaatat 6412548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 12299141 - 12299109
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  12299141 aggctaaaatatggttttggtccctgcaaatat 12299109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 12757609 - 12757641
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  12757609 aggctaaaatatggttttggtccctgcaaatat 12757641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 13268108 - 13268140
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  13268108 aggctaaaatatggttttggtccctgcaaatat 13268140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 15442937 - 15442969
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||| ||||||||||||||||||||    
T  15442937 ggctaaaatatggttttggtccctgcaaatata 15442969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 17765008 - 17765040
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  17765008 aggctaaaatatggttttggtccctgcaaatat 17765040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 17765376 - 17765344
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  17765376 aggctaaaatatgattttggtccctgcaaatat 17765344  T

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Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 19690392 - 19690424
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  19690392 aggctaaaatatggttttggtccctgcaaatat 19690424  T

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Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 21385250 - 21385282
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  21385250 aggctaaaatatggttttggtccctgcaaatat 21385282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 21385585 - 21385553
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  21385585 aggctaaaatatggttttggtccctgcaaatat 21385553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 23502236 - 23502268
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  23502236 aggctaaaatatggttttggtccctgcaaatat 23502268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 18326582 - 18326670
Alignment:
Q  148 gaaaatcgtccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    ||||| ||||||||||||| | ||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  18326582 gaaaaacgtccttgcaaaaaaatttgttttttaaaatagtccctgagcccactttcttgttgatttgtcccatttctgcctatgtggca 18326670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 77 - 231
Target Start/End: Original strand, 10292815 - 10292969
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||| |||||| ||| | |||||         |||| || ||| ||||||| |||||||||    
T  10292815 aggctaaaatatgattttggtcccttcaaatatagcgaatttgcgttttgatccttgataaaaaaatttttgaaattcatccctgcaaaaaattttgttt 10292914  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatg 231  Q
    || |||||| |||||||  ||||||||||| ||||||||||||||||||| ||||    
T  10292915 tttaaaataatccttggatccactttcttgctgatttgtctcatttctgcgtatg 10292969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 38658477 - 38658648
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttg 173  Q
    |||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||  ||||         ||||  | ||| ||||||   |||||    
T  38658477 tttaggctaaaatatgcttctggtccatgcaaatatagcgaatttgggttttggtccctggtaaaaaaaaaattgaaatccatccctgcaaatttttttg 38658576  T
Q  174 tttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    ||||| ||||||||| |||| |||||||| ||| ||||||| | ||||| |||||||||||||| ||||||||    
T  38658577 ttttttaaaatagtctttggccccactttattgatgatttggcacatttatgcctatgtggcat-tgctgact 38658648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 277
Target Start/End: Complemental strand, 45518021 - 45517820
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||  | |           |||| ||||||||||||   |||||||    
T  45518021 taggctaaaatatgcttttggtccctgcaagtatagcgagtttgggttttggtccctggttatttttttttttaaaaacgtccttgcaaatttttttgtt 45517922  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggt 275  Q
    ||| |||||||||  |||||||| ||||||| | ||||| | |||||  || ||||||| |  |||||||| || |||| |||| |||||||||||||||    
T  45517921 ttttaaaatagtctatgggcccaatttcttgctaatttggcgcattttcgcttatgtggtaggtgctgactgtgtaaacttgtatatgtggcatccaggt 45517822  T
Q  276 gg 277  Q
    ||    
T  45517821 gg 45517820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 28998052 - 28997992
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  28998052 ggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctagtaaa 28997992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 259
Target Start/End: Complemental strand, 22534782 - 22534599
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna-gaaaatcgtccttgcaaaacattttgtt 175  Q
    ||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||  ||||          |||  ||  || |||||||  |||||||    
T  22534782 aggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaaaatttttttttgaatttcaaccctgcaaaattttttgtt 22534683  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgta 259  Q
    ||| |||| ||||||||| |||||||||||| ||||||| ||||||| ||| |||||||||  |||||||| | ||||| ||||    
T  22534682 ttttaaaaaagtccttggacccactttcttgctgatttggctcatttttgcttatgtggcaagtgctgactgtacaaacttgta 22534599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 10717117 - 10717175
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  10717117 tttaggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccct 10717175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 10718509 - 10718453
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  10718509 taggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccct 10718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 1420501 - 1420363
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnna--gaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||||||||||||||||||||||| || ||||| | ||||||||| |||||        |  |||| || ||||| |||||  |||||||    
T  1420501 ggctaaaatatgtttttggtccctgcaaatatagcgagtttggatattggtccctgataaaaaaaaaaaattgaaattcatcctttcaaaattttttgtt 1420402  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    ||| |||||||||| ||| |||||||| ||| |||||||    
T  1420401 ttttaaaatagtccatggacccactttattgatgatttg 1420363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 3483629 - 3483692
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    ||||| |||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||    
T  3483629 tttagactaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctgataa 3483692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 22272330 - 22272275
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  22272330 aggctaaaatatgcttttggtccccgcaaatatagcgaatttgggttttggtccct 22272275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 4182623 - 4182676
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  4182623 gctaaaatatgcttttggtccctgtaaatatagcgaatttgggttttggtccct 4182676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 14197824 - 14197885
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||||||||||||||||||||||| | || ||||| |||||||||||| ||||    
T  14197824 aggctaaaatatgtttttggtccctgcaaatatggcgagtttggattttggtccctagtaaa 14197885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 28996835 - 28996888
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  28996835 gctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccct 28996888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 269
Target Start/End: Original strand, 36588221 - 36588414
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    ||||||||||||| ||||||||||||||||||||| || |||| ||||||||||||  | |||         |||   | ||| |||||||  |||||||    
T  36588221 aggctaaaatatgcttttggtccctgcaaatatagcgagtttgcgttttggtccctggtaaaaaaaaaatttgaattacatccctgcaaaattttttgtt 36588320  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcat 269  Q
    ||| ||||| |||| ||| |||||||| ||| |||||| || ||||| | | ||||||  |  ||||||||||||||| |||||||||||||||    
T  36588321 ttttaaaatggtccctggacccacttttttgctgatttatcacatttttacttatgtgttagttgctgactatgcaaaaatgtacatgtggcat 36588414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 38455449 - 38455502
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcccta 133  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  38455449 ctaaaatatgtttttggtccttgcaaatatagtgaatttgagttttggtcccta 38455502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 38456791 - 38456735
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||    
T  38456791 taggctaaaatatgcttttggtccctgcaaatatagcaaatttaggttttggtccct 38456735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 41847243 - 41847180
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    |||||||||||||||| |||| ||| |||||||||||| ||||||| |||||||||||| ||||    
T  41847243 tttaggctaaaatatgcttttagtctctgcaaatatagcgaatttgagttttggtccctgataa 41847180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 45516399 - 45516532
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgttttta 179  Q
    ||||||||||||||| |||| || |||||||| ||||||||||||||||| ||  ||||         ||||| | |||||||||||  ||||||||||     
T  45516399 ctaaaatatgtttttagtccatgtaaatatagcgaatttgggttttggtctctggtaaaaaaaaaattgaaaaacatccttgcaaaaatttttgtttttt 45516498  T
Q  180 aaaatagtccttgggcccactttcttgttgattt 213  Q
    |||||||||  |||  ||||||||||| ||||||    
T  45516499 aaaatagtctctggatccactttcttgctgattt 45516532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 1376933 - 1376989
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||| ||||||| |||||||||||||||||||||  ||||||| |||||||||||    
T  1376933 taggcttaaatatgattttggtccctgcaaatatagccaatttggattttggtccct 1376989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 1385616 - 1385560
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||| ||||||| |||||||||||||||||||||  ||||||| |||||||||||    
T  1385616 taggcttaaatatggttttggtccctgcaaatatagccaatttggattttggtccct 1385560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 22270941 - 22270997
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||| |||| ||||||    
T  22270941 taggctaaaatatgcttttgatccctgcaaatatagcgaatttggattttagtccct 22270997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 30123151 - 30123199
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggtttt 125  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  30123151 aggctaaaatatgtttttggtccatacaaatatagcgaatttgggtttt 30123199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 30124288 - 30124228
Alignment:
Q  72 tctttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||| |||||||||||||||||| ||  | |||| ||||||||||||    
T  30124288 tctttaggctaaaatatgcttttggtccctgcaaataaagcaagtttgagttttggtccct 30124228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 22533316 - 22533371
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||| |||||||||||| | |||||| || |||||||||||||||||    
T  22533316 aggctaaaatatgcttttggtccctgtatatatagcgagtttgggttttggtccct 22533371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 4184038 - 4183984
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| |||| |||||||||||||||| |  |||||||||||||||||    
T  4184038 ggctaaaatatgcttttagtccctgcaaatatagtgcgtttgggttttggtccct 4183984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 4376020 - 4375979
Alignment:
Q  68 aatatctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  4376020 aatatctttaggctaaaatatggttttagtccctgcaaatat 4375979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 6783577 - 6783630
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||||||||||||||||||||| |||||||||| | |||||||  |||||||||    
T  6783577 aggctaaaatatgtttttggtcactgcaaatatggtgaatttgaattttggtcc 6783630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 10293793 - 10293728
Alignment:
Q  168 attttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtg 233  Q
    ||||||||||| ||||||||||||   |||| ||||||| ||||||||||||||| ||| ||||||    
T  10293793 attttgttttttaaaatagtccttaaacccattttcttgctgatttgtctcatttatgcatatgtg 10293728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 9465368 - 9465320
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggtttt 125  Q
    |||||||| ||||||||| || ||||||||||||| |||||||||||||    
T  9465368 aggctaaagtatgtttttagttcctgcaaatatagtgaatttgggtttt 9465320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 41357342 - 41357266
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    ||||||| |||||||||||  |||||||  ||||||| ||||||||| |||||||| |||||| ||  |||||||||    
T  41357342 tgcaaaaaattttgttttttgaaatagttattgggcctactttcttgatgatttgtttcatttttgaatatgtggca 41357266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 3512270 - 3512235
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  3512270 tttaggctaaaatatggttttggtccctgcaaatat 3512235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 10337115 - 10337150
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  10337115 tttaggctaaaatatggttttggtccctgcaaatat 10337150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 11019861 - 11019826
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  11019861 tttaggctaaaatatggttttggtccctgcaaatat 11019826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 28346762 - 28346727
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  28346762 tttaggctaaaatatggttttggtccctgcaaatat 28346727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 39440480 - 39440421
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||| ||||||||| ||||||||| | || |||| |||||||||||| |||||    
T  39440480 gctaaaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctgataaa 39440421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 3031602 - 3031548
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||| |||||| |   |||| |||||||||||||    
T  3031602 ggctaaaatatgtttttggtccctgtaaatatggctcatttaggttttggtccct 3031548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 4710223 - 4710189
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  4710223 ttaggctaaaatatggttttggtccctgcaaatat 4710189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 10337452 - 10337418
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  10337452 ttaggctaaaatatggttttggtccctgcaaatat 10337418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 4473701 - 4473734
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaata 108  Q
    ||||||||||||||| ||||||||||||||||||    
T  4473701 ttaggctaaaatatggttttggtccctgcaaata 4473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 5357421 - 5357454
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  5357421 taggctaaaatatgattttggtccctgcaaatat 5357454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 9496339 - 9496372
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  9496339 taggctaaaatatggttttggtccctgcaaatat 9496372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 17073805 - 17073838
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  17073805 taggctaaaatatggttttggtccctgcaaatat 17073838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 17574465 - 17574432
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  17574465 taggctaaaatatggttttggtccctgcaaatat 17574432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 25600228 - 25600261
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  25600228 taggctaaaatatggttttggtccctgcaaatat 25600261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 25702811 - 25702778
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  25702811 taggctaaaatatggttttggtccctgcaaatat 25702778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 32726273 - 32726240
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  32726273 taggctaaaatatggttttggtccctgcaaatat 32726240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 34904563 - 34904518
Alignment:
Q  83 aaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    ||||||| |||| |||||| ||||||||| ||||||||||||||||    
T  34904563 aaatatgattttagtcccttcaaatatagcgaatttgggttttggt 34904518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 35097326 - 35097359
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  35097326 taggctaaaatatggttttggtccctgcaaatat 35097359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 35347000 - 35346967
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  35347000 taggctaaaatatggttttggtccctgcaaatat 35346967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 36589447 - 36589394
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    ||||||||||||| |||| || ||||||||||||| || ||| |||||||||||    
T  36589447 aggctaaaatatgattttagttcctgcaaatatagcgagtttaggttttggtcc 36589394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 37536425 - 37536388
Alignment:
Q  72 tctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  37536425 tcttttggctaaaatatggttttggtccctgcaaatat 37536388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 41846729 - 41846814
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgac 245  Q
    |||||||  |||| ||||| |||||||||||| | ||||||||  || | ||||||| ||||| ||||||||||| | ||||||||    
T  41846729 tgcaaaaatttttcttttttaaaatagtccttagacccacttttgtgctaatttgtcccatttttgcctatgtggtagatgctgac 41846814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 2728231 - 2728263
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  2728231 aggctaaaatatgattttggtccctgcaaatat 2728263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 7420229 - 7420261
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  7420229 aggctaaaatatggttttggtccctgcaaatat 7420261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 8298976 - 8298944
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  8298976 aggctaaaatatggttttggtccctgcaaatat 8298944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 9496724 - 9496692
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  9496724 aggctaaaatatggttttggtccctgcaaatat 9496692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 10540783 - 10540751
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  10540783 aggctaaaatatggttttggtccctgcaaatat 10540751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 11019519 - 11019551
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  11019519 aggctaaaatatggttttggtccctgcaaatat 11019551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 11976372 - 11976404
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  11976372 aggctaaaatatggttttggtccctgcaaatat 11976404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 20277691 - 20277723
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  20277691 aggctaaaatatggttttggtccctgcaaatat 20277723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 20278062 - 20278026
Alignment:
Q  73 ctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  20278062 ctttaggctaaaatatggttttggtccctgcagatat 20278026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 20984145 - 20984177
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  20984145 aggctaaaatatggttttggtccctgcaaatat 20984177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 21064318 - 21064350
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  21064318 aggctaaaatatggttttggtccctgcaaatat 21064350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 21064689 - 21064653
Alignment:
Q  73 ctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  21064689 ctttaggctaaaatatggttttggtccctgcagatat 21064653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 27117977 - 27117945
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  27117977 aggctaaaatatggttttggtccctgcaaatat 27117945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 28346393 - 28346425
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  28346393 aggctaaaatatggttttggtccctgcaaatat 28346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 28497254 - 28497286
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  28497254 aggctaaaatatgattttggtccctgcaaatat 28497286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 32725906 - 32725938
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  32725906 aggctaaaatatggttttggtccctgcaaatat 32725938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 34963299 - 34963331
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  34963299 aggctaaaatatggttttggtccctgcaaatat 34963331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 37536085 - 37536117
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  37536085 aggctaaaatatggttttggtccctgcaaatat 37536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 39439923 - 39439955
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  39439923 aggctaaaatatgattttggtccctgcaaatat 39439955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 44997930 - 44997962
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  44997930 aggctaaaatatgattttggtccctgcaaatat 44997962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 80 - 253
Target Start/End: Complemental strand, 23863107 - 23862933
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcg-tccttgcaaaacattttgttttt 178  Q
    ||||||||||||||||||| |||||||||| | || ||||||||||| |||||| ||||           |||||  |||||||||||  ||||||||||    
T  23863107 ctaaaatatgtttttggtctctgcaaatatggcgagtttgggttttgatccctagtaaaaaaaaaaattgaaatccatccttgcaaaattttttgttttt 23863008  T
Q  179 aaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaa 253  Q
     ||||||||| |||| |||||||| ||| |||||||||  |||| ||||||||||||||||||||||| ||||||    
T  23863007 caaaatagtctttggacccactttattgctgatttgtccaatttatgcctatgtggcatatgctgactgtgcaaa 23862933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 76 - 277
Target Start/End: Original strand, 23861750 - 23861951
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||||||||||||||||||||||| | || ||||| |||||||||||  ||||         ||||  | ||| |||||    |||||||    
T  23861750 taggctaaaatatgtttttggtccctgcaaatatggagagtttggattttggtccctggtaaaaaaaaatttgaaatccatccctgcaattttttttgtt 23861849  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggcatccaggt 275  Q
    ||| |||||||||| |||  ||||||| |||||||||||   ||||| | | ||||||||| ||| ||| | ||||||||||| ||||||||||||||||    
T  23861850 ttttaaaatagtccatggatccactttattgttgatttggaccatttttacttatgtggcagatgttgattgtgcaaacatgttcatgtggcatccaggt 23861949  T
Q  276 gg 277  Q
    ||    
T  23861950 gg 23861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 25979311 - 25979256
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25979311 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccct 25979256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 25977866 - 25977924
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  25977866 tttaggctaaaatatgtttttggtccctgcaaatatagtgagtttgggttttggtccct 25977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 2412489 - 2412433
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  2412489 taggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccct 2412433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 1777468 - 1777523
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  1777468 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccct 1777523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 8809595 - 8809651
Alignment:
Q  77 aggctaaaatatgtttttggtccc-tgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  8809595 aggctaaaatatgtttttggtcccttgcaaatataacgaatttgggttttggtccct 8809651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 29794378 - 29794316
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||| |||||    
T  29794378 ttaggctaaaatatgtttt-ggtccctgcaaatatagcgaatttgagttttggttcctgataaa 29794316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 11087134 - 11087220
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||  |||||||||| |||||||||  | | |||||||||||| ||||||||||||||| |||||  |||||| |||||||||    
T  11087134 tgcaaaattttttgttttttaaaatagtctcttgacccactttcttgctgatttgtctcatttttgcctgcgtggcaaatgctgact 11087220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 25283331 - 25283277
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||    
T  25283331 ggctaaaatatgtttttggtcactgcaaatatagcgaatttgagttttgatccct 25283277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 43824166 - 43824223
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    |||||||||||||| ||||||||||||||||  |||||| ||||||||||||| ||||    
T  43824166 taaaatatgtttttcgtccctgcaaatatagcaaatttgagttttggtccctagtaaa 43824223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 1778849 - 1778797
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||||||||||| ||||||| ||||||||||||| || |||||||||||||||    
T  1778849 ggctaaaatatgcttttggttcctgcaaatatagcgactttgggttttggtcc 1778797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 12067000 - 12067052
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcccta 133  Q
    ||||||||||||||||||||| ||||||||  ||||||| |||||||||||||    
T  12067000 taaaatatgtttttggtccctacaaatataacgaatttgagttttggtcccta 12067052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 36837839 - 36837783
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||| |||||||| ||||||||| |||||||||||| || |||||||||||||||||    
T  36837839 taggttaaaatatatttttggtctctgcaaatatagcgagtttgggttttggtccct 36837783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 4040272 - 4040221
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||| |||||    
T  4040272 taaaatatgattttggtccctgcaaatatagagaatttaggttttgctccct 4040221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 24754214 - 24754171
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttt 124  Q
    ||||||||||||||||||||||||||||| | ||||||||||||    
T  24754214 taaaatatgtttttggtccctgcaaatatggcgaatttgggttt 24754171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 11088739 - 11088689
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    ||||||||||||||||| |||| ||||||||||| ||||||| ||||||||    
T  11088739 ggctaaaatatgtttttcgtccatgcaaatatagcgaatttgagttttggt 11088689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 15531025 - 15531059
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaata 108  Q
    |||||||||||||||||||||||||||||||||||    
T  15531025 tttaggctaaaatatgtttttggtccctgcaaata 15531059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 19603736 - 19603790
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||||| ||||||||||||||||||||||||||||    ||||||||||||||||    
T  19603736 taggcttaaatatgtttttggtccctgcaaatataactcatttgggttttggtcc 19603790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 19604978 - 19604924
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||| |||||| |   ||||||||||||||||||    
T  19604978 ggctaaaatatgtttttggtccctgtaaatatggctcatttgggttttggtccct 19604924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 24749580 - 24749522
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    ||||||||||| ||||||||||| ||||  |||||||| |||||||||||| |||||||    
T  24749580 tccttgcaaaaaattttgttttttaaaacggtccttggacccactttcttgctgatttg 24749522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 1590875 - 1590782
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaa 253  Q
    |||||||  |||||||||| |||| ||||| ||   ||||||||||||||||||| ||||||| ||  |||||||||  |||||||||| ||||    
T  1590875 tgcaaaattttttgttttttaaaaaagtccctgaatccactttcttgttgatttggctcatttttgtttatgtggcaagtgctgactatacaaa 1590782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 8810760 - 8810715
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggtttt 125  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||    
T  8810760 ctaaaatatgtttttggtctctgcaaatatagcgaatttggatttt 8810715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 20245367 - 20245310
Alignment:
Q  76 taggctaaaatatg-tttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| |||||| | ||||||||||||| ||||||||||||| ||||||    
T  20245367 taggctaaaatatggtttttgattcctgcaaatatagcgaatttgggttttagtccct 20245310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 25705455 - 25705418
Alignment:
Q  72 tctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25705455 tctttaggctaaaatatggttttggtccctgcaaatat 25705418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 43825904 - 43825815
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatg 249  Q
    |||||||  |||||||||| |||||||||  |||  | ||||||||| ||||||||||||||  |||||| || ||| ||||||||||||    
T  43825904 tgcaaaattttttgttttttaaaatagtctctggatctactttcttgctgatttgtctcattgttgcctacgtagcagatgctgactatg 43825815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 3924832 - 3924764
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcat 237  Q
    |||||||||| |||||||||||||| |||||||| ||| ||||||| | ||||| | |||| |||||||    
T  3924832 ttttgttttttaaaatagtccttggccccactttattgatgatttgacacatttattcctacgtggcat 3924764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 20131308 - 20131348
Alignment:
Q  69 atatctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  20131308 atatttttaggctaaaatatggttttggtccctgcaaatat 20131348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 14003405 - 14003440
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  14003405 tttaggctaaaatatggttttggtccctgcaaatat 14003440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 24358612 - 24358647
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  24358612 tttaggctaaaatatggttttggtccctgcaaatat 24358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 10671628 - 10671662
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||||| ||||||||||||||||||||    
T  10671628 taggctaaaatatggttttggtccctgcaaatata 10671662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 12067041 - 12067079
Alignment:
Q  91 ttttggtccctgcaaatatagggaatttgggttttggtc 129  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  12067041 ttttggtccctacaaatatagggaatttgagttttggtc 12067079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 12068406 - 12068364
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaattt 118  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||    
T  12068406 taggctaaaatatgcttttgatccctgcaaatatagcgaattt 12068364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 16673774 - 16673740
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  16673774 ttaggctaaaatatggttttggtccctgcaaatat 16673740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 25977949 - 25978007
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    ||| ||||||| ||||||||||| |||| ||||| ||| |||||||||||| |||||||    
T  25977949 tccctgcaaaaaattttgttttttaaaaaagtccctggacccactttcttgctgatttg 25978007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 30215873 - 30215839
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||||| ||||||||||||||||||||    
T  30215873 taggctaaaatatggttttggtccctgcaaatata 30215839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 13215058 - 13215091
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  13215058 taggctaaaatatggttttggtccctgcaaatat 13215091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 16523327 - 16523294
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  16523327 taggctaaaatatggttttggtccctgcaaatat 16523294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 31909480 - 31909447
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  31909480 taggctaaaatatggttttggtccctgcaaatat 31909447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 41451835 - 41451868
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  41451835 taggctaaaatatggttttggtccctgcaaatat 41451868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 44559060 - 44559093
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  44559060 taggctaaaatatggttttggtccctgcaaatat 44559093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 2481558 - 2481526
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  2481558 aggctaaaatatggttttggtccctgcaaatat 2481526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 3172019 - 3172051
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  3172019 aggctaaaatatgattttggtccctgcaaatat 3172051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 4423894 - 4423926
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  4423894 aggctaaaatatggttttggtccctgcaaatat 4423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 4424186 - 4424154
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  4424186 aggctaaaatatggttttggtccctgcaaatat 4424154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 11087049 - 11087101
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||||||||||| ||||  ||||||||||||||| || ||||| |||||||||    
T  11087049 ggctaaaatatgattttaatccctgcaaatatagcgagtttggcttttggtcc 11087101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 14003743 - 14003711
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  14003743 aggctaaaatatggttttggtccctgcaaatat 14003711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 15842824 - 15842792
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  15842824 aggctaaaatatggttttggtccctgcaaatat 15842792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 16522990 - 16523022
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  16522990 aggctaaaatatggttttggtccctgcaaatat 16523022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 16673410 - 16673442
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  16673410 aggctaaaatatggttttggtccctgcaaatat 16673442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 18113088 - 18113120
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  18113088 aggctaaaatatggttttggtccctgcaaatat 18113120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 25282498 - 25282558
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgccta 229  Q
    |||||||||| |||||||||||||  |||||||| ||| ||||||| | ||||| ||||||    
T  25282498 ttttgttttttaaaatagtccttgaccccactttattgatgatttgacacatttatgccta 25282558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 25705084 - 25705116
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  25705084 aggctaaaatatggttttggtccctgcaaatat 25705116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 25954114 - 25954146
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||| ||||||||||||||    
T  25954114 aggctaaaatatgtttttagtccctgcaaatat 25954146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 26239021 - 26239057
Alignment:
Q  155 gtccttgcaaaacattttgtttttaaaaatagtcctt 191  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  26239021 gtccttgcaaaaaattttgtttttgaaaatagtcctt 26239057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 29859873 - 29859841
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  29859873 aggctaaaatatggttttggtccctgcaaatat 29859841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 30215421 - 30215453
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  30215421 aggctaaaatatggttttggtccctgcaaatat 30215453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 30844607 - 30844575
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||||||||||||| ||||||||||    
T  30844607 ggctaaaatatgtttttggtccttgcaaatata 30844575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 31644840 - 31644872
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  31644840 aggctaaaatatggttttggtccctgcaaatat 31644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 33576118 - 33576086
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  33576118 aggctaaaatatggttttggtccctgcaaatat 33576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 37228732 - 37228764
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  37228732 aggctaaaatatggttttggtccctgcaaatat 37228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 37911121 - 37911089
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  37911121 aggctaaaatatggttttggtccctgcaaatat 37911089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 40125290 - 40125258
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  40125290 aggctaaaatatgattttggtccctgcaaatat 40125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 43672319 - 43672287
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  43672319 aggctaaaatatgattttggtccctgcaaatat 43672287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 345959 - 345901
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcccta 133  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  345959 ttaggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtcccta 345901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 376432 - 376269
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacatttt 172  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||  ||||| || |||         |||| || | | |||||||  ||||    
T  376432 tttaggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttattccctcataaaaaaaaaaattgaaattcatgcctgcaaaatttttt 376333  T
Q  173 gtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    |||||| |||||||||| |||  |||||||||| ||||||||  |||||| ||| |||||||||    
T  376332 gttttttaaaatagtccctggatccactttctttttgatttggttcatttttgcttatgtggca 376269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 374335 - 374389
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||| ||||||||||||||| || |||||||||||||||||    
T  374335 ggctaaaatatgattttgatccctgcaaatatagcgagtttgggttttggtccct 374389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 344934 - 344991
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||| ||||||| ||||||||||||||||||| | || |||||||||||||||||    
T  344934 ttaggctcaaatatgattttggtccctgcaaatatggcgagtttgggttttggtccct 344991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 345030 - 345107
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||||| |||||||||||||| |||||||| ||  ||||||| | ||||| |||||| |||||||  |||||||    
T  345030 ttttgttttttaaaatagtccttggccccactttattaatgatttggcacatttatgcctacgtggcattcgctgact 345107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 9e-22; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 76 - 265
Target Start/End: Original strand, 45618283 - 45618472
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||  ||||         |||   | ||| ||||||| ||||||||    
T  45618283 taggctaatatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaaaaaaaaaattgaattacatccctgcaaaaaattttgtt 45618382  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtg 265  Q
    ||| ||||  |||||||| |||||||| ||| |||||| || ||||| | | |||||| ||  ||||||||||||||| |||||||||||    
T  45618383 ttttaaaacggtccttggacccacttttttgctgatttatcacatttttacttatgtgtcagctgctgactatgcaaaaatgtacatgtg 45618472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 32699373 - 32699221
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||| || |||         |||| |||||| |||||||  |||| |||    
T  32699373 ggctaaaatatgtttttggtccctgtaaatatagcgagtttgggttttggtccctcataaaaaaaaaatttgaaattcgtccctgcaaaattttttattt 32699274  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgccta 229  Q
    || |||||||||| | |||||||||| ||| ||||||||| ||||||| ||||    
T  32699273 tttaaaatagtccctaggcccacttttttgctgatttgtcacatttctaccta 32699221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 25349369 - 25349308
Alignment:
Q  16 atggattaggggtcgagtcatggcccaaaataaaactaaccatagagtcatgaatatcttta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  25349369 atggattaggggtcgagtcatggcccaaaataaaactatccatagagtcatggatagcttta 25349308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 3880556 - 3880397
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| ||||         |||  |  ||| ||||||| |||||||||    
T  3880556 aggctaaaatatgtttttggttcctgcaaatatagcgagtttgggttttggtccctagtaaaaaaaaaattgaattttatccctgcaaaaaattttgttt 3880457  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    || |||| ||||| ||| |||| ||||||  ||||||| ||||||  ||| |||||||||    
T  3880456 tttaaaaaagtccctggacccattttcttactgatttggctcattgttgcttatgtggca 3880397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 44705299 - 44705359
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| ||||    
T  44705299 ggctaaaatatgtttttggtctctgcaaatatagtgaatttgggttttggttcctagtaaa 44705359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 22204055 - 22204109
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  22204055 ggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccct 22204109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 29060857 - 29060771
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||  |||||||||| |||||||| | ||| |||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  29060857 tgcaaaattttttgttttttaaaatagttcatggacccactttcttgctgatttatctcatttttgcctacgtggcaaatgctgact 29060771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 42359405 - 42359351
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||||| || ||||| |||||||||||    
T  42359405 ggctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccct 42359351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 17326794 - 17326733
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  17326794 aggcttaaatatggttttggtccctccaaatatagggcatttgggttttggtccctagtaaa 17326733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 266
Target Start/End: Original strand, 19674410 - 19674602
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttg 173  Q
    |||||||||||||||| ||||||||| ||||||||||| || |||| ||||||||||||  |||          |||| || ||| |||||||  |||||    
T  19674410 tttaggctaaaatatgcttttggtccttgcaaatatagcgagtttgagttttggtccctggtaattttttttttgaaattcatccctgcaaaattttttg 19674509  T
Q  174 tttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtgg 266  Q
    ||||| |||| ||||||||| ||||||||  || ||||||| | ||||| |||||| |||  || || ||||| |||||| | ||||| ||||    
T  19674510 ttttttaaaaaagtccttggccccactttactgatgatttggcacatttttgcctacgtgatatttgttgactgtgcaaaaacgtacaggtgg 19674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 29415649 - 29415720
Alignment:
Q  175 ttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||| |||||||||||||| ||||| |||||| |||||||||  ||||||| |||||||||| |||||||||    
T  29415649 tttttaaaatagtccttggacccaccttcttgctgatttgtcctatttctgtctatgtggcagatgctgact 29415720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 33137288 - 33137233
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||    
T  33137288 aggctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttagtccct 33137233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 42358031 - 42358086
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| |||||    
T  42358031 aggctaaaatatgtttttggtccctgcaaatataggaagtttgagttttgatccct 42358086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 54121761 - 54121622
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaat-cgtccttgcaaaacattttgt 174  Q
    |||||||||||||| ||||| ||||||||||||  | || |||||||||||||||||  ||||        |   ||| | ||||||||||| |||||||    
T  54121761 taggctaaaatatgattttgctccctgcaaatacggcgagtttgggttttggtccctggtaaaaaaaaaaaatttaattcatccttgcaaaatattttgt 54121662  T
Q  175 ttttaaaaatagtccttgggcccactttcttgttgatttg 214  Q
    |||| |||||||| ||| |||||||||||||| |||||||    
T  54121661 tttttaaaatagttcttaggcccactttcttgctgatttg 54121622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 3879082 - 3879140
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||| ||||| ||||||||||||||| || ||||| |||||||||||    
T  3879082 tttaggctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccct 3879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 41933816 - 41933870
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    |||||||||||||| |||||||| |||||||||||| || |||||||||||||||    
T  41933816 taggctaaaatatgattttggtctctgcaaatatagcgagtttgggttttggtcc 41933870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 45619794 - 45619736
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||| |||||||||||||||| || ||| ||||||| |||||    
T  45619794 tttaggctaaaatatgtttttagtccctgcaaatatagcgagtttaggttttgttccct 45619736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 35054660 - 35054713
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtc 129  Q
    |||| ||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  35054660 taggttaaaatatgattttagtccctgcaaatatagcgaatttgggttttggtc 35054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 19675679 - 19675619
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    |||||||||||| ||||||||||||||||||||  || ||||| ||||||||||| |||||    
T  19675679 ggctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtccctgataaa 19675619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 41935126 - 41935078
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtc 129  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||    
T  41935126 taaaatatgtttttggtccctgcaaatataacgagtttgggttttggtc 41935078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 16574424 - 16574373
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| |||||||||||||||| ||||||  ||||||||||||    
T  16574424 taaaatatgtttttagtccctgcaaatatagcgaatttaagttttggtccct 16574373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 16916069 - 16916212
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcccta-ataaannnnnnnnagaaaatcgtccttgcaaaacattttgttttt 178  Q
    |||||||||  ||||||||||||||||||| | || |||| ||||||||| ||| | |||         ||||| ||||||| ||||| ||||||||||     
T  16916069 ctaaaatatacttttggtccctgcaaatatggtgagtttgagttttggtctctagagaaaaaaacttttgaaaaacgtccttacaaaaaattttgtttta 16916168  T
Q  179 aaaaatagtccttgggcccactttcttgttgatttgtctcattt 222  Q
     |||| ||||  |||||||||||||||| ||||||| |||||||    
T  16916169 caaaaaagtctctgggcccactttcttgatgatttggctcattt 16916212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 17281570 - 17281625
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||| || |||| |||||||||||||||| |||||||| |||||||||||    
T  17281570 aggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccct 17281625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 17370072 - 17370127
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||| || |||| |||||||||||||||| |||||||| |||||||||||    
T  17370072 aggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccct 17370127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 17371901 - 17371850
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||| ||||| ||||||||||||||  ||||||||||||||||||||    
T  17371901 taaaatatgcttttgatccctgcaaatataacgaatttgggttttggtccct 17371850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 234
Target Start/End: Original strand, 32697999 - 32698150
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgtttt 177  Q
    |||||||||||| ||||| ||||||||||||||| |||||| |||||| || ||| |||||         ||||    ||| ||||||| ||||| ||||    
T  32697999 ggctaaaatatgattttgatccctgcaaatatagcgaatttaggttttagttcctgataaaaaaaattt-gaaa----tccctgcaaaaaattttatttt 32698093  T
Q  178 taaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtgg 234  Q
    | ||||||||| ||||| ||||||| ||| ||||||||| ||||| ||| |||||||    
T  32698094 ttaaaatagtcattgggtccacttttttgctgatttgtcacatttttgcttatgtgg 32698150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 41935036 - 41934937
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgtacatgtggca 268  Q
    |||||||||| |||||||||||||| |||||||| ||| ||||||| | |||||  | |||  | |||  ||||||| |||||| |||||||||||||||    
T  41935036 ttttgttttttaaaatagtccttggacccactttgttgctgatttgacacattttagtctacatagcaattgctgaccatgcaatcatgtacatgtggca 41934937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 16573377 - 16573546
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    ||||||||||||| |||||||| || ||||||| | ||||||||||||||||| ||  ||           ||||  | ||| |||||||  ||||||||    
T  16573377 aggctaaaatatgcttttggtctctacaaatatggcgaatttgggttttggtctctggtatttttttttttgaaatccatccctgcaaaattttttgttt 16573476  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    || ||||||||| |||| |||||||| ||| ||||||| | ||||| |||||| |||||||  |||||||    
T  16573477 tttaaaatagtctttggccccactttattgatgatttggcacatttatgcctacgtggcattcgctgact 16573546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 45533376 - 45533461
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgac 245  Q
    |||||||  |||||||||| |||||||||  ||  |||||||||||| | ||| ||||| ||| ||||||||||||| ||||||||    
T  45533376 tgcaaaattttttgttttttaaaatagtctctgaacccactttcttgcttattagtctcgtttatgcctatgtggcagatgctgac 45533461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 5259211 - 5259179
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||||||||||||||||||    
T  5259211 aggctaaaatatgtttttggtccctgcaaatat 5259179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 13074129 - 13074093
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13074129 tttaggctaaaatatggttttggtccctgcaaatata 13074093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 34659705 - 34659765
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataa 137  Q
    ||||||||||||| ||||||||||||||||||| | || ||  ||||||||||||| ||||    
T  34659705 aggctaaaatatgcttttggtccctgcaaatatggcgagttaaggttttggtccctgataa 34659765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 38166493 - 38166545
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    |||||||||||||||||||  ||||||||||||||| || ||||| |||||||    
T  38166493 taggctaaaatatgtttttaatccctgcaaatatagcgagtttggattttggt 38166545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 13631224 - 13631259
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  13631224 tttaggctaaaatatggttttggtccctgcaaatat 13631259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 14488191 - 14488156
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  14488191 tttaggctaaaatatggttttggtccctgcaaatat 14488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 14594202 - 14594237
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  14594202 tttaggctaaaatatggttttggtccctgcaaatat 14594237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 29059712 - 29059767
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||| |||||||||||||||  ||||||| |||  |||||||    
T  29059712 aggctaaaatatgtttttcgtccctgcaaatataacgaatttgagttccggtccct 29059767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 35464014 - 35464049
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  35464014 tttaggctaaaatatggttttggtccctgcaaatat 35464049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 41933910 - 41933977
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggca 236  Q
    |||||||||| |||||||||||||  | |||||||||| |||| || ||||||| ||| |||||||||    
T  41933910 ttttgttttttaaaatagtccttgaactcactttcttgctgatgtggctcatttttgcttatgtggca 41933977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 42823772 - 42823807
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  42823772 tttaggctaaaatatgattttggtccctgcaaatat 42823807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 38167829 - 38167779
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccc 131  Q
    |||||||| |||||||||||| ||||||||  ||||||||||||| |||||    
T  38167829 taaaatatatttttggtccctacaaatataacgaatttgggttttagtccc 38167779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 45619711 - 45619621
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||||||  ||||||||||  |||| |||| | | |||||||| ||| |||||| || |||||||||||| ||||||  ||||||||    
T  45619711 tccttgcaaaagtttttgtttttttaaatggtccctagacccacttttttgctgatttatcacatttctgcctacgtggcagttgctgact 45619621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 4211559 - 4211592
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  4211559 taggctaaaatatggttttggtccctgcaaatat 4211592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 11693123 - 11693090
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  11693123 taggctaaaatatggttttggtccctgcaaatat 11693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 12152152 - 12152185
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  12152152 taggctaaaatatggttttggtccctgcaaatat 12152185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 12152495 - 12152462
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  12152495 taggctaaaatatggttttggtccctgcaaatat 12152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 14487800 - 14487833
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  14487800 taggctaaaatatggttttggtccctgcaaatat 14487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 20291984 - 20292017
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  20291984 taggctaaaatatgattttggtccctgcaaatat 20292017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 29060942 - 29060889
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtcc 130  Q
    ||||||||||||||||||  ||||||||||||||| || ||||  |||||||||    
T  29060942 aggctaaaatatgtttttaatccctgcaaatatagcgagtttgaattttggtcc 29060889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 29420539 - 29420506
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  29420539 taggctaaaatatggttttggtccctgcaaatat 29420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 33134889 - 33134922
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||||||| |||||||||||||    
T  33134889 taggctaaaatatgtttttgatccctgcaaatat 33134922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 40198576 - 40198628
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||| ||||   |||||||||||||| || |||||||||||||||||    
T  40198576 aggctaaaatatgctttt---ccctgcaaatatagcgagtttgggttttggtccct 40198628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 42358111 - 42358160
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttctt 205  Q
    ||| |||||||  |||||||||| |||||||||||||| |||||||||||    
T  42358111 tccctgcaaaattttttgttttttaaaatagtccttggacccactttctt 42358160  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 46115492 - 46115529
Alignment:
Q  155 gtccttgcaaaacattttgtttttaaaaatagtccttg 192  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  46115492 gtccttgcaaaatattttgtttttgaaaatagtccttg 46115529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 46128626 - 46128663
Alignment:
Q  155 gtccttgcaaaacattttgtttttaaaaatagtccttg 192  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  46128626 gtccttgcaaaatattttgtttttgaaaatagtccttg 46128663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 53915681 - 53915714
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  53915681 taggctaaaatatggttttggtccctgcaaatat 53915714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 53916049 - 53916016
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  53916049 taggctaaaatatggttttggtccctgcaaatat 53916016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 55542559 - 55542435
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaaca 255  Q
    ||||||||||   |||||||||| |||| |||||| |  |||||||||||||||||||| ||||||| ||| | ||| |||  |||||||  | |||||     
T  55542559 tccttgcaaatttttttgttttttaaaaaagtcctaga-cccactttcttgttgatttgactcatttttgcttttgttgcaagtgctgaccgtacaaact 55542461  T
Q  256 tgtacatgtggcatccaggtggcaat 281  Q
    |||| |  ||||||| ||||||||||    
T  55542460 tgtatacatggcatctaggtggcaat 55542435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 5827974 - 5827942
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  5827974 aggctaaaatatggttttggtccctgcaaatat 5827942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 13530714 - 13530682
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  13530714 aggctaaaatatggttttggtccctgcaaatat 13530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 13631600 - 13631568
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  13631600 aggctaaaatatggttttggtccctgcaaatat 13631568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 14791807 - 14791775
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  14791807 aggctaaaatatggttttggtccctgcaaatat 14791775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 24774044 - 24774076
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  24774044 aggctaaaatatggttttggtccctgcaaatat 24774076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 25423923 - 25423955
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  25423923 aggctaaaatatggttttggtccctgcaaatat 25423955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 25424076 - 25424032
Alignment:
Q  148 gaaaatcgtccttgcaaaacattttgtttttaaaaatagtccttg 192  Q
    |||||| |||| ||||||| ||||||||||| |||||||||||||    
T  25424076 gaaaatagtccctgcaaaatattttgtttttgaaaatagtccttg 25424032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 25424313 - 25424281
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  25424313 aggctaaaatatggttttggtccctgcaaatat 25424281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 29499181 - 29499213
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  29499181 aggctaaaatatggttttggtccctgcaaatat 29499213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 30046793 - 30046761
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  30046793 aggctaaaatatggttttggtccctgcaaatat 30046761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 30061134 - 30061102
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  30061134 aggctaaaatatggttttggtccctgcaaatat 30061102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 35119291 - 35119323
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  35119291 aggctaaaatatggttttggtccctgcaaatat 35119323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 43231087 - 43231119
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  43231087 aggctaaaatatggttttggtccctgcaaatat 43231119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 43231390 - 43231358
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  43231390 aggctaaaatatggttttggtccctgcaaatat 43231358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 47359516 - 47359568
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||| || | ||||||||||| ||||||| ||||| ||||||    
T  47359516 ctaaaatatgtttttcgttcttgcaaatatagcgaatttgagttttagtccct 47359568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 54903476 - 54903444
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  54903476 aggctaaaatatggttttggtccctgcaaatat 54903444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 1115 - 1022
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatg 249  Q
    |||||||||||  |||||||||| ||||| |||||||| |||||||| ||| ||||||| | ||||||||||||||||||||  ||||||||||    
T  1115 tccttgcaaaattttttgttttttaaaattgtccttggccccactttattgatgatttggcacatttctgcctatgtggcattcgctgactatg 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 1194 - 1140
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||| ||||||||| |||||||||| | || |||| ||||||||||||    
T  1194 ggctaaaatatatttttggtctctgcaaatatggcgagtttgagttttggtccct 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 3936577 - 3936632
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  3936577 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccct 3936632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 80 - 214
Target Start/End: Original strand, 14809165 - 14809300
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaata-aannnnnnnnagaaaatcgtccttgcaaaacattttgttttt 178  Q
    |||||||||||||||| ||||| ||||||||| |||||||| |||||||||||| || ||         ||||  | ||||||||||| |||||||||||    
T  14809165 ctaaaatatgtttttgatccctacaaatatagcgaatttggattttggtccctagtagaaataaattttgaaatccatccttgcaaaaaattttgttttt 14809264  T
Q  179 aaaaatagtccttgggcccactttcttgttgatttg 214  Q
     ||||||||| |||| |||||||||||| |||||||    
T  14809265 taaaatagtcattggacccactttcttgctgatttg 14809300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 3954049 - 3954106
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  3954049 ttaggctaaaatatgtttttggtccttgcaaatatatcgaatttgggttttggtccct 3954106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 31540493 - 31540546
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  31540493 ttaggctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggt 31540546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 4565383 - 4565447
Alignment:
Q  68 aatatctttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||| || |||||||||||||||||    
T  4565383 aatatttttaggctaaaatatgtttttagtccctacaaatatagcgagtttgggttttggtccct 4565447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 15604120 - 15603944
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttg 173  Q
    ||||| ||||||| |||||||||||| ||||||||| | || |||||||||||||||||| ||||         |||| || ||| |||||||  ||||     
T  15604120 tttagactaaaatgtgtttttggtcc-tgcaaatatggcgagtttgggttttggtccctagtaaaaaaaaaattgaaattcatccctgcaaaatttttta 15604022  T
Q  174 tttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgca 251  Q
    ||||| |||||||||||||| ||||||||  || ||||||| |  |||| ||||||||| ||||  ||||||| ||||    
T  15604021 ttttttaaaatagtccttggacccactttactgatgatttggcatatttttgcctatgtagcattcgctgactgtgca 15603944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 15599762 - 15599818
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccc 131  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||    
T  15599762 ttaggctaaaatatgcttttggtccctacaaatatggcgaatttgggttttggtccc 15599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 27571189 - 27571134
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||| |||||    
T  27571189 aggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttgatccct 27571134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 246
Target Start/End: Complemental strand, 3938121 - 3937951
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaannnnnnnnagaaaatcgtccttgcaaaacattttgtt 175  Q
    |||||||||||||| |||| ||||||||||||||||  | ||| |||||||||||||  ||||         |||     |||||||||||  |||||||    
T  3938121 taggctaaaatatgcttttagtccctgcaaatatagcaagtttaggttttggtccctggtaaaaaaaaatttgaattatatccttgcaaaagtttttgtt 3938022  T
Q  176 tttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    ||| ||||| |||| | | |||||||| ||| ||||||||| |||||||||||| ||||||  ||||||||    
T  3938021 ttttaaaatggtccctagacccacttttttgctgatttgtcacatttctgcctacgtggcaattgctgact 3937951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 3205071 - 3204994
Alignment:
Q  169 ttttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    |||||||||| ||||||||| |||| |||||||| ||||||||||| | ||||| |||||| |||||||  |||||||    
T  3205071 ttttgttttttaaaatagtcattggccccactttattgttgatttggcacatttatgcctacgtggcattcgctgact 3204994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 34911888 - 34911827
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| ||||| |||||| ||||    
T  34911888 aggctaaaatatgattttggtccctgcaaatatagcgagtttggattttgatccctagtaaa 34911827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 31541681 - 31541627
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||||| ||||||||||||||  |||||| |||||| ||||||    
T  31541681 ggctaaaatatgtttttgatccctgcaaatataacgaattttggtttttgtccct 31541627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 246
Target Start/End: Complemental strand, 6894069 - 6893900
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacattttgttt 176  Q
    |||||||||||||||||||||| |||||||||   || ||| |||||||||||||  | |||         |||| || ||| |||||||  ||||||||    
T  6894069 ggctaaaatatgtttttggtccttgcaaatatgacgagtttaggttttggtccctggtaaaaaaaaaatttgaaattcatccctgcaaaattttttgttt 6893970  T
Q  177 ttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgact 246  Q
    || ||||||||| |||  |||||||| ||| ||||||| | ||||| ||||||||| ||||  |||||||    
T  6893969 tttaaaatagtcattgaccccactttattgatgatttggcacatttatgcctatgtagcattcgctgact 6893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 1105153 - 1105117
Alignment:
Q  73 ctttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1105153 ctttaggctaaaatatggttttggtccctgcaaatat 1105117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 1104854 - 1104889
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  1104854 tttaggctaaaatatggttttggtccctgcaaatat 1104889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 19565835 - 19565800
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  19565835 tttaggctaaaatatggttttggtccctgcaaatat 19565800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 27570058 - 27570109
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccc 131  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||| ||||    
T  27570058 ctaaaatatgattttggtccttgcaaatatagcgagtttgggttttgttccc 27570109  T

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Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 32108804 - 32108839
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  32108804 tttaggctaaaatatggttttggtccctgcaaatat 32108839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 35877056 - 35877021
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  35877056 tttaggctaaaatatggttttggtccctgcaaatat 35877021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 3936657 - 3936770
Alignment:
Q  156 tccttgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaaca 255  Q
    ||| |||||||  ||||| |||| ||||| || | ||| |||||||| ||| |||||| || ||||| | | ||||||  |  ||||||||||||||| |    
T  3936657 tccctgcaaaattttttgatttttaaaatggttcctggacccacttttttgctgatttatcacatttttacttatgtgttagttgctgactatgcaaaaa 3936756  T
Q  256 tgtacatgtggcat 269  Q
    ||||||||||||||    
T  3936757 tgtacatgtggcat 3936770  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 5917124 - 5917157
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  5917124 taggctaaaatatggttttggtccctgcaaatat 5917157  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 19685015 - 19685048
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  19685015 taggctaaaatatggttttggtccctgcaaatat 19685048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 20690731 - 20690764
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  20690731 taggctaaaatatggttttggtccctgcaaatat 20690764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 24443746 - 24443713
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  24443746 taggctaaaatatggttttggtccctgcaaatat 24443713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 1381246 - 1381278
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  1381246 aggctaaaatatggttttggtccctgcaaatat 1381278  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 1381612 - 1381580
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  1381612 aggctaaaatatggttttggtccctgcaaatat 1381580  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 3205159 - 3205107
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||| ||||| |||||||||||||   || |||||||||||||||||    
T  3205159 ctaaaatatgcttttgatccctgcaaatatgatgagtttgggttttggtccct 3205107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 4736543 - 4736511
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  4736543 aggctaaaatatggttttggtccctgcaaatat 4736511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 5917461 - 5917429
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  5917461 aggctaaaatatggttttggtccctgcaaatat 5917429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 17070534 - 17070566
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  17070534 aggctaaaatatggttttggtccctgcaaatat 17070566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 18258161 - 18258193
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  18258161 aggctaaaatatggttttggtccctgcaaatat 18258193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 18258528 - 18258496
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  18258528 aggctaaaatatggttttggtccctgcaaatat 18258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 19565466 - 19565498
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  19565466 aggctaaaatatggttttggtccctgcaaatat 19565498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 19685381 - 19685349
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  19685381 aggctaaaatatggttttggtccctgcaaatat 19685349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 20660947 - 20660979
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  20660947 aggctaaaatatggttttggtccctgcaaatat 20660979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 20986090 - 20986058
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  20986090 aggctaaaatatggttttggtccctgcaaatat 20986058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 24443379 - 24443411
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  24443379 aggctaaaatatggttttggtccctgcaaatat 24443411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 25254107 - 25253999
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgta 259  Q
    |||||||  |||||||||| |||| |||| || | ||||||||  || ||||||| | ||||| |||||| |||| || || ||||| |||||| | |||    
T  25254107 tgcaaaattttttgttttttaaaaaagtcattagccccactttactgatgatttggcgcatttttgcctacgtggtatttgttgactgtgcaaaaacgta 25254008  T
Q  260 catgtggca 268  Q
    |||||||||    
T  25254007 catgtggca 25253999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 25254188 - 25254136
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||| ||||||||||||||||||||  || |||| |||||| |||||    
T  25254188 ctaaaatatgcttttggtccctgcaaatatatagagtttgagttttgatccct 25254136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 25317897 - 25317789
Alignment:
Q  160 tgcaaaacattttgtttttaaaaatagtccttgggcccactttcttgttgatttgtctcatttctgcctatgtggcatatgctgactatgcaaacatgta 259  Q
    |||||||  |||||||||| |||| |||| || | ||||||||  || ||||||| | ||||| |||||| |||| || || ||||| |||||| | |||    
T  25317897 tgcaaaattttttgttttttaaaaaagtcattagccccactttactgatgatttggcgcatttttgcctacgtggtatttgttgactgtgcaaaaacgta 25317798  T
Q  260 catgtggca 268  Q
    |||||||||    
T  25317797 catgtggca 25317789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 25317978 - 25317926
Alignment:
Q  80 ctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||| ||||||||||||||||||||  || |||| |||||| |||||    
T  25317978 ctaaaatatgcttttggtccctgcaaatatatagagtttgagttttgatccct 25317926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 28213372 - 28213404
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  28213372 aggctaaaatatggttttggtccctgcaaatat 28213404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 35876687 - 35876719
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  35876687 aggctaaaatatggttttggtccctgcaaatat 35876719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 35928063 - 35928095
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  35928063 aggctaaaatatggttttggtccctgcaaatat 35928095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 37271707 - 37271675
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  37271707 aggctaaaatatggttttggtccctgcaaatat 37271675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 38170513 - 38170545
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  38170513 aggctaaaatatggttttggtccctgcaaatat 38170545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 40764414 - 40764446
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  40764414 aggctaaaatatggttttggtccctgcaaatat 40764446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 30968 - 30912
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  30968 taggctaaaatatggttttggtccctgcaaatatagtgagtttgggttttggtccct 30912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 29726 - 29783
Alignment:
Q  75 ttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    ||||||||||||||| |||||||||||||||||| |  || ||||| |||||||||||    
T  29726 ttaggctaaaatatgcttttggtccctgcaaataaaacgagtttggattttggtccct 29783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 490 - 436
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  490 ggctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccct 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 119593 - 119647
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  119593 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccct 119647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 121044 - 120990
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||| ||||||||||||||||||||  || |||||||||||||||||    
T  121044 ggctaaaatatgcttttggtccctgcaaatataacgagtttgggttttggtccct 120990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 9918 - 9976
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccct 132  Q
    |||||||||||||||| ||||| ||||||||||||||| || ||||| |||||||||||    
T  9918 tttaggctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccct 9976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 1863 - 1985
Alignment:
Q  81 taaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaat-aaannnnnnnnagaaaatcgtccttgcaaaacattttgttttta 179  Q
    ||||||||| ||||||||||||||||||||| || |||| |||||| |||||| | |||         |||| || ||| |||||||  ||||||||||     
T  1863 taaaatatgattttggtccctgcaaatatagcgagtttgagttttgatccctagtaaaaaaaagttttgaaattcatccatgcaaaattttttgtttttt 1962  T
Q  180 aaaatagtccttgggcccacttt 202  Q
    |||||||||||||| ||||||||    
T  1963 aaaatagtccttggacccacttt 1985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 202578 - 202632
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccc 131  Q
    ||||||||||||| ||||||||||||||||||||  || ||||| ||||||||||    
T  202578 aggctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtccc 202632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 2664 - 2629
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  2664 tttaggctaaaatatggttttggtccctgcaaatat 2629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 27368 - 27333
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  27368 tttaggctaaaatatggttttggtccctgcaaatat 27333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 42813 - 42754
Alignment:
Q  79 gctaaaatatgtttttggtccctgcaaatatagggaatttgggttttggtccctaataaa 138  Q
    ||||||||||| ||||||||| ||||||||| | || |||| |||||||||||| |||||    
T  42813 gctaaaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctgataaa 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 75768 - 75733
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  75768 tttaggctaaaatatggttttggtccctgcaaatat 75733  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 223176 - 223141
Alignment:
Q  74 tttaggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||||| |||||||||||||||||||    
T  223176 tttaggctaaaatatggttttggtccctgcaaatat 223141  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 47924 - 47956
Alignment:
Q  77 aggctaaaatatgtttttggtccctgcaaatat 109  Q
    ||||||||||||| |||||||||||||||||||    
T  47924 aggctaaaatatggttttggtccctgcaaatat 47956  T

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Target: scaffold0599 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 6639 - 6593
Alignment:
Q  82 aaaatatgtttttggtccctgcaaatatagggaatttgggttttggt 128  Q
    ||||| || |||| |||||||||||||||| ||||||||||||||||    
T  6639 aaaatgtgcttttagtccctgcaaatatagcgaatttgggttttggt 6593  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 3750 - 3783
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  3750 taggctaaaatatggttttggtccctgcaaatat 3783  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 82628 - 82591
Alignment:
Q  155 gtccttgcaaaacattttgtttttaaaaatagtccttg 192  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  82628 gtccttgcaaaatattttgtttttgaaaatagtccttg 82591  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 82708 - 82675
Alignment:
Q  76 taggctaaaatatgtttttggtccctgcaaatat 109  Q
    |||||||||||||| |||||||||||||||||||    
T  82708 taggctaaaatatggttttggtccctgcaaatat 82675  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 16724 - 16756
Alignment:
Q  78 ggctaaaatatgtttttggtccctgcaaatata 110  Q
    |||||||||||| ||||||||||||||||||||    
T  16724 ggctaaaatatgattttggtccctgcaaatata 16756  T

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