View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5965_low_32 (Length: 203)
Name: NF5965_low_32
Description: NF5965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5965_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 41074505 - 41074675
Alignment:
| Q |
15 |
caaaggttgtgttgagcattttcttgtattcttgaataccacgtatacacattgacaagcatgaaatgttgtgcttccatattttgaaaaagcttattta |
114 |
Q |
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| T |
41074505 |
caaaggttgtgttgagcatttgcttgtattcttgaataccacctatacacattgacaagcatgaaatgttgtgtttccatattttgaaaaagcttattta |
41074604 |
T |
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| Q |
115 |
gagtttatgtagacttatcttatcacatatgtatccaaattaactatagaatacacttatgatatctcatt |
185 |
Q |
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| T |
41074605 |
gagtttatgtagacttatcttatcacatatgtatccaaattaactacagaatacacttatgatatctcatt |
41074675 |
T |
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