View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5967-Insertion-5 (Length: 410)

Name: NF5967-Insertion-5
Description: NF5967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5967-Insertion-5
NF5967-Insertion-5
[»] chr3 (20 HSPs)
chr3 (9-410)||(27782751-27783152)
chr3 (7-50)||(20327837-20327880)
chr3 (7-101)||(35038416-35038515)
chr3 (9-50)||(1723066-1723107)
chr3 (9-50)||(4155377-4155418)
chr3 (9-57)||(16239636-16239685)
chr3 (13-57)||(27086635-27086680)
chr3 (9-50)||(54567945-54567986)
chr3 (12-50)||(17638287-17638325)
chr3 (9-99)||(22729099-22729194)
chr3 (9-50)||(11589838-11589879)
chr3 (72-101)||(16239588-16239617)
chr3 (70-99)||(17001477-17001506)
chr3 (9-50)||(21833401-21833442)
chr3 (9-57)||(33640090-33640139)
chr3 (70-99)||(39269330-39269359)
chr3 (9-50)||(54368569-54368610)
chr3 (70-98)||(472116-472144)
chr3 (10-50)||(12930119-12930159)
chr3 (18-50)||(50083079-50083111)
[»] chr5 (17 HSPs)
chr5 (9-99)||(2063724-2063818)
chr5 (11-58)||(13296717-13296764)
chr5 (9-99)||(24528539-24528634)
chr5 (9-50)||(8081103-8081144)
chr5 (9-101)||(41666983-41667080)
chr5 (68-101)||(2061992-2062025)
chr5 (70-101)||(19705900-19705931)
chr5 (70-101)||(41666813-41666844)
chr5 (70-100)||(6413482-6413512)
chr5 (9-99)||(15480321-15480416)
chr5 (70-100)||(17352491-17352521)
chr5 (70-100)||(24531597-24531627)
chr5 (9-50)||(9368648-9368689)
chr5 (9-50)||(18333689-18333730)
chr5 (9-50)||(24531652-24531693)
chr5 (70-99)||(37782106-37782135)
chr5 (70-98)||(30770321-30770349)
[»] chr8 (27 HSPs)
chr8 (9-100)||(41790657-41790752)
chr8 (9-57)||(10884110-10884158)
chr8 (9-101)||(24532411-24532508)
chr8 (9-101)||(11232184-11232281)
chr8 (9-99)||(12317045-12317140)
chr8 (9-99)||(11232419-11232514)
chr8 (9-57)||(20301306-20301355)
chr8 (9-57)||(21087938-21087987)
chr8 (9-101)||(19256810-19256907)
chr8 (70-101)||(5932005-5932036)
chr8 (17-100)||(12688305-12688393)
chr8 (70-101)||(15042726-15042757)
chr8 (70-101)||(35682837-35682868)
chr8 (70-101)||(38447483-38447514)
chr8 (70-101)||(39052593-39052624)
chr8 (70-101)||(39052985-39053016)
chr8 (70-99)||(7669640-7669669)
chr8 (70-135)||(7729907-7729969)
chr8 (9-50)||(28213094-28213135)
chr8 (9-50)||(31197668-31197708)
chr8 (9-57)||(37001271-37001320)
chr8 (71-100)||(42584672-42584701)
chr8 (70-98)||(20301261-20301289)
chr8 (70-98)||(20301501-20301529)
chr8 (70-98)||(21087893-21087921)
chr8 (70-98)||(21088133-21088161)
chr8 (10-46)||(31079566-31079602)
[»] chr1 (26 HSPs)
chr1 (9-94)||(4098393-4098482)
chr1 (9-98)||(38668125-38668219)
chr1 (11-101)||(4112998-4113093)
chr1 (9-50)||(25145710-25145751)
chr1 (9-50)||(29266006-29266047)
chr1 (9-50)||(35772082-35772123)
chr1 (17-101)||(35772261-35772350)
chr1 (70-101)||(2859448-2859479)
chr1 (70-101)||(15986389-15986420)
chr1 (9-99)||(3169765-3169860)
chr1 (68-98)||(16163167-16163197)
chr1 (9-58)||(30369879-30369929)
chr1 (12-50)||(33156786-33156824)
chr1 (70-100)||(40079150-40079180)
chr1 (9-50)||(2120130-2120171)
chr1 (68-101)||(17452882-17452915)
chr1 (70-99)||(20208582-20208611)
chr1 (74-135)||(21626399-21626457)
chr1 (70-99)||(25713392-25713421)
chr1 (70-99)||(26173280-26173309)
chr1 (17-50)||(33157274-33157307)
chr1 (9-50)||(39348343-39348383)
chr1 (9-50)||(51589859-51589900)
chr1 (70-98)||(8870745-8870773)
chr1 (71-99)||(26173513-26173541)
chr1 (70-98)||(38668360-38668388)
[»] chr2 (24 HSPs)
chr2 (9-101)||(27036405-27036499)
chr2 (9-50)||(93617-93658)
chr2 (9-50)||(5509132-5509173)
chr2 (9-57)||(28407783-28407832)
chr2 (9-50)||(40379434-40379475)
chr2 (70-101)||(5711495-5711526)
chr2 (70-101)||(5711731-5711762)
chr2 (9-101)||(14466400-14466497)
chr2 (17-100)||(14927100-14927188)
chr2 (70-101)||(16533544-16533575)
chr2 (70-101)||(17719397-17719428)
chr2 (70-100)||(37812554-37812584)
chr2 (9-50)||(93344-93385)
chr2 (9-50)||(2029822-2029863)
chr2 (9-50)||(10571023-10571064)
chr2 (9-50)||(15124773-15124814)
chr2 (9-50)||(16419320-16419361)
chr2 (70-99)||(16419501-16419530)
chr2 (70-99)||(17525394-17525423)
chr2 (9-57)||(21383660-21383709)
chr2 (73-101)||(93182-93210)
chr2 (10-50)||(27897597-27897637)
chr2 (70-98)||(32356386-32356414)
chr2 (12-59)||(33381184-33381232)
[»] chr7 (28 HSPs)
chr7 (9-101)||(48243427-48243524)
chr7 (18-101)||(6634852-6634940)
chr7 (9-100)||(25620134-25620230)
chr7 (9-101)||(29469602-29469699)
chr7 (9-50)||(10882229-10882270)
chr7 (9-57)||(33996301-33996350)
chr7 (9-50)||(40121914-40121955)
chr7 (9-49)||(4886383-4886423)
chr7 (9-56)||(21821852-21821900)
chr7 (9-101)||(21861291-21861388)
chr7 (70-101)||(21861526-21861557)
chr7 (70-101)||(29469837-29469868)
chr7 (70-101)||(31485480-31485511)
chr7 (18-101)||(34027624-34027712)
chr7 (70-101)||(36277282-36277313)
chr7 (70-101)||(43688215-43688246)
chr7 (9-99)||(31257257-31257352)
chr7 (70-99)||(2404230-2404259)
chr7 (17-50)||(3038082-3038115)
chr7 (70-99)||(3520096-3520125)
chr7 (70-99)||(4454775-4454804)
chr7 (70-99)||(26239972-26240001)
chr7 (68-101)||(26562127-26562160)
chr7 (9-50)||(33834244-33834285)
chr7 (17-50)||(36993072-36993105)
chr7 (70-99)||(48243117-48243146)
chr7 (18-50)||(7786253-7786285)
chr7 (70-98)||(35308202-35308230)
[»] chr6 (20 HSPs)
chr6 (9-101)||(9705017-9705114)
chr6 (9-101)||(13353198-13353295)
chr6 (9-101)||(33796323-33796420)
chr6 (9-50)||(4868803-4868844)
chr6 (70-101)||(4868633-4868664)
chr6 (70-101)||(31961175-31961206)
chr6 (9-51)||(8001540-8001582)
chr6 (18-100)||(16570157-16570244)
chr6 (9-50)||(3680065-3680106)
chr6 (70-99)||(3680245-3680274)
chr6 (70-99)||(6542999-6543028)
chr6 (9-50)||(8026442-8026483)
chr6 (9-57)||(12330169-12330218)
chr6 (9-57)||(15082134-15082183)
chr6 (9-50)||(20373623-20373664)
chr6 (9-57)||(27653262-27653311)
chr6 (9-50)||(30256631-30256672)
chr6 (9-50)||(30256865-30256906)
chr6 (9-50)||(33494592-33494633)
chr6 (14-57)||(11085626-11085670)
[»] chr4 (32 HSPs)
chr4 (9-49)||(52827415-52827455)
chr4 (9-100)||(52559565-52559661)
chr4 (70-144)||(44118915-44118986)
chr4 (9-50)||(12869253-12869294)
chr4 (9-50)||(17111616-17111657)
chr4 (9-50)||(22231298-22231339)
chr4 (9-50)||(35788712-35788753)
chr4 (9-50)||(40716611-40716652)
chr4 (9-50)||(40717431-40717472)
chr4 (70-101)||(9279224-9279255)
chr4 (70-101)||(11036802-11036833)
chr4 (70-101)||(22863471-22863502)
chr4 (70-101)||(27634137-27634168)
chr4 (70-101)||(28245582-28245613)
chr4 (70-101)||(31254463-31254494)
chr4 (70-101)||(35788656-35788687)
chr4 (70-101)||(35788891-35788922)
chr4 (70-101)||(39902619-39902650)
chr4 (9-50)||(1518217-1518258)
chr4 (9-57)||(9685443-9685492)
chr4 (9-50)||(14783177-14783218)
chr4 (9-50)||(24513350-24513391)
chr4 (9-50)||(25052905-25052946)
chr4 (9-50)||(35609701-35609742)
chr4 (70-99)||(35645821-35645850)
chr4 (9-50)||(50543320-50543361)
chr4 (9-57)||(50543557-50543606)
chr4 (9-50)||(53828513-53828554)
chr4 (18-50)||(7926611-7926643)
chr4 (10-50)||(23209894-23209934)
chr4 (70-98)||(28246141-28246169)
chr4 (70-98)||(35796798-35796826)
[»] scaffold0083 (1 HSPs)
scaffold0083 (7-98)||(51236-51332)
[»] scaffold0048 (1 HSPs)
scaffold0048 (9-101)||(81839-81936)
[»] scaffold0692 (2 HSPs)
scaffold0692 (9-99)||(5744-5839)
scaffold0692 (70-98)||(5600-5628)
[»] scaffold0519 (2 HSPs)
scaffold0519 (9-99)||(1915-2010)
scaffold0519 (70-101)||(2148-2179)
[»] scaffold0766 (1 HSPs)
scaffold0766 (70-99)||(6273-6302)
[»] scaffold0481 (1 HSPs)
scaffold0481 (9-50)||(3461-3502)
[»] scaffold0129 (1 HSPs)
scaffold0129 (9-50)||(14356-14397)
[»] scaffold0092 (1 HSPs)
scaffold0092 (9-50)||(5708-5749)
[»] scaffold0005 (2 HSPs)
scaffold0005 (9-50)||(56512-56553)
scaffold0005 (18-57)||(288656-288696)
[»] scaffold0001 (1 HSPs)
scaffold0001 (73-101)||(429870-429898)


Alignment Details
Target: chr3 (Bit Score: 312; Significance: 1e-176; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 9 - 410
Target Start/End: Complemental strand, 27783152 - 27782751
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttacttaataaagattgcccccacttataaacacattgtcaggcgggccat 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27783152 ctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttacttaatgaagattgcccccacttataaacacattgtcaggcgggccat 27783053  T
Q  109 ctcttatatgatgtggactctttaacatgtttttctcagtacaccctatcacacgtgcgtgaacatattatgtttttatatagtgacattttttataaac 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  27783052 ctcttatatgatgtggactctttaacatgtttttctcagtacaccctatcacacgtgcgtgaacatattatgtttttatatcgtgacatttcttataaac 27782953  T
Q  209 tcttatcaggcattgtttaaccttgcaacttgtttggccctaagctttataatctcatttgcaaatgacagnnnnnnnnnnnnnnnnnnnnnnttaaggg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||                      |||||||    
T  27782952 tcttatcaggcattgtttaaccttgcaacttgtttggccctaagctttataatctcatttgcaaatgaaagaaaataaaaattaaaacaaaaattaaggg 27782853  T
Q  309 acaatgaccttgaaaagaagttccttgtatgttgctcttttaatttttcatattctcgcataaacaatgaccttgaaacaaagaaatttccttgctactt 408  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27782852 acaatgaccttgaaaagaagttccctgtatgttgctcttttaatttttcatattctcgcataaacaatgaccttgaaacaaagaaattcccttgctactt 27782753  T
Q  409 aa 410  Q
    ||    
T  27782752 aa 27782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 20327837 - 20327880
Alignment:
Q  7 cactgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  20327837 cactgataccatattagaaatcatggttgggcctaacacaaccc 20327880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 35038416 - 35038515
Alignment:
Q  7 cactgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||| || || ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||||    
T  35038416 cactgataccatcttagaagtcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaacacattgtcaggc 35038515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 1723066 - 1723107
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  1723066 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 1723107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 4155418 - 4155377
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  4155418 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 4155377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 16239685 - 16239636
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 57  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  16239685 ctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaac 16239636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 27086680 - 27086635
Alignment:
Q  13 taccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 57  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  27086680 taccatcttagaaatcatggttgggcctaacacaactccacaaaac 27086635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 54567986 - 54567945
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  54567986 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 54567945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 17638325 - 17638287
Alignment:
Q  12 ataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  17638325 ataccatcttagaaatcgtggttgggcctaacacaaccc 17638287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 22729194 - 22729099
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||  || ||||||||||||||||| ||||||||   |||    | | | |||||||||||||| |||||||||||||||    
T  22729194 ctgataccatcttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacattgtcag 22729099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 11589879 - 11589838
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  11589879 ctgataccatattagaaatcgtggttgggcctaacacaaccc 11589838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 101
Target Start/End: Complemental strand, 16239617 - 16239588
Alignment:
Q  72 ttgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||    
T  16239617 ttgcccccacttataaacacattgtcaggc 16239588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 17001477 - 17001506
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  17001477 gattgcccccacttataaacacattgtcag 17001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 21833442 - 21833401
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  21833442 ctgataccatgttagaaatcgtggttgggcctaacacaaccc 21833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 33640139 - 33640090
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 57  Q
    |||||| ||||||||||||  |||||||||||||||||| ||||||||||    
T  33640139 ctgatatcatcttagaaattgtgattgggcctaacacaatcccacaaaac 33640090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 39269359 - 39269330
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  39269359 gattgcccccacttataaacacattgtcag 39269330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 54368610 - 54368569
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  54368610 ctgataccatcttagaaatcgtggttgggtctaacacaaccc 54368569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 472116 - 472144
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  472116 gattgcccccacttataaacacattgtca 472144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 12930119 - 12930159
Alignment:
Q  10 tgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||||||  || ||||||||||||||||||    
T  12930119 tgataccatcttagaaatggtggttgggcctaacacaaccc 12930159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 50083079 - 50083111
Alignment:
Q  18 tcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||| ||||||||||||||||||    
T  50083079 tcttagaaatcatggttgggcctaacacaaccc 50083111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 2063724 - 2063818
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt---aataaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||  ||||   | | | ||||||||||||||||||||||||||||||    
T  2063724 ctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgagtgaggattgcccccacttataaacacattgtcag 2063818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 13296764 - 13296717
Alignment:
Q  11 gataccatcttagaaatcatgattgggcctaacacaacccacaaaact 58  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  13296764 gataccatcttagaaatcgtggttgggcctaacacaacccacaaaact 13296717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 24528634 - 24528539
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||    
T  24528634 ctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 24528539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 8081103 - 8081144
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  8081103 ctgataccatcttagaaatcatggttgggcctaacacaaccc 8081144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 41666983 - 41667080
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||||    
T  41666983 ctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaggc 41667080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 2061992 - 2062025
Alignment:
Q  68 aagattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||||    
T  2061992 aagattgcccccacttataaacacattgtcaggc 2062025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 19705931 - 19705900
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  19705931 gattgcccccacttataaacacattgtcaggc 19705900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 41666813 - 41666844
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  41666813 gattgcccccacttataaacacattgtcaggc 41666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 6413482 - 6413512
Alignment:
Q  70 gattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||||||||||||||||||||    
T  6413482 gattgcccccacttataaacacattgtcagg 6413512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 15480416 - 15480321
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaata----aagattgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||| || |||||||||||| ||||| |||||||   |||   |    | ||||||||||||||||||||||||||||||    
T  15480416 ctgataccatcttagaaatcgtggttgggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacattgtcag 15480321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 17352491 - 17352521
Alignment:
Q  70 gattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||||||||||||||||||||    
T  17352491 gattgcccccacttataaacacattgtcagg 17352521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Complemental strand, 24531627 - 24531597
Alignment:
Q  70 gattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||||||||||||||||||||    
T  24531627 gattgcccccacttataaacacattgtcagg 24531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 9368689 - 9368648
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||    
T  9368689 ctgataccaccttagaaattatggttgggcctaacacaaccc 9368648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 18333689 - 18333730
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||||| || || ||||||||||||||||||    
T  18333689 ctgataccatcttagaattcgtggttgggcctaacacaaccc 18333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 24531693 - 24531652
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || |||||| |||||||||||    
T  24531693 ctgataccatcttagaaatcgtggttgggcataacacaaccc 24531652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 37782106 - 37782135
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  37782106 gattgcccccacttataaacacattgtcag 37782135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 30770321 - 30770349
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  30770321 gattgcccccacttataaacacattgtca 30770349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 41790752 - 41790657
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttactta----ataaagattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||   ||||     | | ||||| |||||||||||||||||||||||||    
T  41790752 ctgataccatcttagaaatcgtggttgggcctaacacaacccacaaaaccggcttatgaggtgaggattgtccccacttataaacacattgtcagg 41790657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 10884158 - 10884110
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacccacaaaac 57  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||    
T  10884158 ctgataccatcttagaaatcgtggttgggcctaacacaacccacaaaac 10884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 24532411 - 24532508
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||||    
T  24532411 ctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcaggc 24532508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 11232184 - 11232281
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||  || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||||    
T  11232184 ctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 11232281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 12317140 - 12317045
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaa----cttacttaataaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||    ||||     | | ||||||||||||||||||||||||||||||    
T  12317140 ctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgcccccacttataaacacattgtcag 12317045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 11232419 - 11232514
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | ||||||||||||||||||||||||||||||    
T  11232419 ctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 11232514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 20301355 - 20301306
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 57  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  20301355 ctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaac 20301306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 21087987 - 21087938
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 57  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  21087987 ctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaac 21087938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 19256810 - 19256907
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||| ||||||||| || ||||||||||||||| |||||||||| | |||      | | ||||||||||||||||||||| ||||||||||    
T  19256810 ctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaattgtcaggc 19256907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 5932005 - 5932036
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  5932005 gattgcccccacttataaacacattgtcaggc 5932036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 12688393 - 12688305
Alignment:
Q  17 atcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaa----taaagattgcccccacttataaacacattgtcagg 100  Q
    ||||||||||||||| |||| |||| |||||||| ||||||||  |||      ||| |||||||||||||||||||||||||||||||    
T  12688393 atcttagaaatcatggttggacctatcacaaccccacaaaactggcttgtgaggtaaggattgcccccacttataaacacattgtcagg 12688305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 15042726 - 15042757
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  15042726 gattgcccccacttataaacacattgtcaggc 15042757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 35682837 - 35682868
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  35682837 gattgcccccacttataaacacattgtcaggc 35682868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 38447483 - 38447514
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  38447483 gattgcccccacttataaacacattgtcaggc 38447514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 39052593 - 39052624
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  39052593 gattgcccccacttataaacacattgtcaggc 39052624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 39052985 - 39053016
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  39052985 gattgcccccacttataaacacattgtcaggc 39053016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 7669669 - 7669640
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  7669669 gattgcccccacttataaacacattgtcag 7669640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 7729969 - 7729907
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggcgggccatctcttatatgatgt-ggactctttaaca 135  Q
    |||||||||||||||||||||||| ||||    ||||||||| ||| |||||| |||||||||||||    
T  7729969 gattgcccccacttataaacacatggtca----ggccatctcatatctgatgtgggactctttaaca 7729907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 28213094 - 28213135
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  28213094 ctgataccatattagaaatcgtggttgggcctaacacaaccc 28213135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 31197708 - 31197668
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  31197708 ctgataccatcttagaaatc-tggttgggcctaacacaaccc 31197668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 37001320 - 37001271
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 57  Q
    ||||||||||||| |||||| || |||||||||||||||| |||||||||    
T  37001320 ctgataccatctttgaaatcgtggttgggcctaacacaactccacaaaac 37001271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 100
Target Start/End: Complemental strand, 42584701 - 42584672
Alignment:
Q  71 attgcccccacttataaacacattgtcagg 100  Q
    ||||||||||||||||||||||||||||||    
T  42584701 attgcccccacttataaacacattgtcagg 42584672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 20301289 - 20301261
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  20301289 gattgcccccacttataaacacattgtca 20301261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 20301529 - 20301501
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  20301529 gattgcccccacttataaacacattgtca 20301501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 21087921 - 21087893
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  21087921 gattgcccccacttataaacacattgtca 21087893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 21088161 - 21088133
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  21088161 gattgcccccacttataaacacattgtca 21088133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 31079566 - 31079602
Alignment:
Q  10 tgataccatcttagaaatcatgattgggcctaacaca 46  Q
    ||||||||||||||||||| | |||||||||||||||    
T  31079566 tgataccatcttagaaatctttattgggcctaacaca 31079602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 4098393 - 4098482
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacccacaaaacttact--taa--taaagattgcccccacttataaacacatt 94  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||  |||  |||  | | |||||||||||||||||||||||||    
T  4098393 ctgataccaacttagaaatcgtggttgggcctaacacaacccacaaaaccaacttgtaaggtgaggattgcccccacttataaacacatt 4098482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 38668219 - 38668125
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||| |  |||     || | |||||||||||||||||||||||||||||    
T  38668219 ctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaattggcttgtgagatgatgattgcccccacttataaacacattgtca 38668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 4112998 - 4113093
Alignment:
Q  11 gataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||   |||      | | ||||||||||||||||||||||||||||||||    
T  4112998 gataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcaggc 4113093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 25145710 - 25145751
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  25145710 ctgatatcatcttagaaatcatggttgggcctaacacaaccc 25145751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 29266047 - 29266006
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  29266047 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 29266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 35772123 - 35772082
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  35772123 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 35772082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 35772350 - 35772261
Alignment:
Q  17 atcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaa----taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||| || |||||||||||||||||| |||||||   |||      ||| ||||||||||||||||||||||||||||||||    
T  35772350 atcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacacattgtcaggc 35772261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 2859448 - 2859479
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  2859448 gattgcccccacttataaacacattgtcaggc 2859479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 15986389 - 15986420
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  15986389 gattgcccccacttataaacacattgtcaggc 15986420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 3169860 - 3169765
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||||||||   |||      | ||||||||||||||||||||||| ||||||||    
T  3169860 ctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaacaaattgtcag 3169765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 98
Target Start/End: Complemental strand, 16163197 - 16163167
Alignment:
Q  68 aagattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||||    
T  16163197 aagattgcccccacttataaacacattgtca 16163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 30369929 - 30369879
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaact 58  Q
    ||||||| |||||||||||| || ||||||||||||||| |||||||||||    
T  30369929 ctgatacaatcttagaaatcgtggttgggcctaacacaaccccacaaaact 30369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 33156824 - 33156786
Alignment:
Q  12 ataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  33156824 ataccatcttagaaatcgtggttgggcctaacacaaccc 33156786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Complemental strand, 40079180 - 40079150
Alignment:
Q  70 gattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||||||||||||||||||||    
T  40079180 gattgcccccacttataaacacattgtcagg 40079150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 2120171 - 2120130
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||| ||||||||||||| ||||||| |||||||||||||    
T  2120171 ctgatatcatcttagaaatcgtgattggacctaacacaaccc 2120130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 17452882 - 17452915
Alignment:
Q  68 aagattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||| ||||||||||||    
T  17452882 aagattgcccccacttataaatacattgtcaggc 17452915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 20208582 - 20208611
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  20208582 gattgcccccacttataaacacattgtcag 20208611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 21626399 - 21626457
Alignment:
Q  74 gcccccacttataaacacattgtcaggcgggccatctcttatatgatgt-ggactctttaaca 135  Q
    ||||||||||||||||| |||||||    ||||||||||||| |||||| |||||||||||||    
T  21626399 gcccccacttataaacatattgtca----ggccatctcttatctgatgtgggactctttaaca 21626457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 25713421 - 25713392
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  25713421 gattgcccccacttataaacacattgtcag 25713392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 26173280 - 26173309
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  26173280 gattgcccccacttataaacacattgtcag 26173309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 33157307 - 33157274
Alignment:
Q  17 atcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||| |||||||||||||||||||||    
T  33157307 atcttagaaatcgtgattgggcctaacacaaccc 33157274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 39348343 - 39348383
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  39348343 ctgataccatcttagaaatcgtg-ttgggcctaacacaaccc 39348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 51589900 - 51589859
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  51589900 ctgataccatattagaaatcgtggttgggcctaacacaaccc 51589859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 8870745 - 8870773
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  8870745 gattgcccccacttataaacacattgtca 8870773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 99
Target Start/End: Original strand, 26173513 - 26173541
Alignment:
Q  71 attgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||||||||||||    
T  26173513 attgcccccacttataaacacattgtcag 26173541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 38668388 - 38668360
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  38668388 gattgcccccacttataaacacattgtca 38668360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 27036405 - 27036499
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaata-aagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||   ||||  |   ||||||||||||||||||||| ||||||||||    
T  27036405 ctgataccatattagaaatcatggttgggcctaacacaaccctacaaaaccggcttatgaggggattgcccccacttataaacaaattgtcaggc 27036499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 93617 - 93658
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  93617 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 93658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 5509173 - 5509132
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  5509173 ctgataccatattagaaatcatggttgggcctaacacaaccc 5509132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 28407783 - 28407832
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 57  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||    
T  28407783 ctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaac 28407832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 40379434 - 40379475
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  40379434 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 40379475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 5711495 - 5711526
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  5711495 gattgcccccacttataaacacattgtcaggc 5711526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 5711731 - 5711762
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  5711731 gattgcccccacttataaacacattgtcaggc 5711762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 14466400 - 14466497
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | |||||| |||||||||||||||||||||||||    
T  14466400 ctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgctcccacttataaacacattgtcaggc 14466497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 14927188 - 14927100
Alignment:
Q  17 atcttagaaatcatgattgggcctaacacaacc-cacaaaacttacttaata----aagattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||| || ||| ||||||||||||| |||||| || |||||  |    | |||||||||||||||||||||||||||||||    
T  14927188 atcttagaaatcgtggttgagcctaacacaaccacacaaagctgacttatgaggtgaggattgcccccacttataaacacattgtcagg 14927100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 16533575 - 16533544
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  16533575 gattgcccccacttataaacacattgtcaggc 16533544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 17719428 - 17719397
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  17719428 gattgcccccacttataaacacattgtcaggc 17719397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 37812554 - 37812584
Alignment:
Q  70 gattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||||||||||||||||||||    
T  37812554 gattgcccccacttataaacacattgtcagg 37812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 93344 - 93385
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  93344 ctgataccatcttaaaaatcgtggttgggcctaacacaaccc 93385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 2029863 - 2029822
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || |||||||||| |||||||    
T  2029863 ctgataccatcttagaaatcgtggttgggcctaaaacaaccc 2029822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 10571064 - 10571023
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||| ||||||||||||||    
T  10571064 ctgataccatcttagaaatcgtggttgagcctaacacaaccc 10571023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 15124773 - 15124814
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  15124773 ctgataccatcttagaaatcgtggttgggtctaacacaaccc 15124814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 16419361 - 16419320
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || |||||||||| |||||||    
T  16419361 ctgataccatcttagaaatcgtggttgggcctaatacaaccc 16419320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 16419530 - 16419501
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  16419530 gattgcccccacttataaacacattgtcag 16419501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 17525394 - 17525423
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  17525394 gattgcccccacttataaacacattgtcag 17525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 21383660 - 21383709
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 57  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||||||    
T  21383660 ctgataccatcttagaaatcgtggttgggcctaactcaatcccacaaaac 21383709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 101
Target Start/End: Original strand, 93182 - 93210
Alignment:
Q  73 tgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||||||||||||    
T  93182 tgcccccacttataaacacattgtcaggc 93210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 27897597 - 27897637
Alignment:
Q  10 tgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||||||  || ||||||||||||||||||    
T  27897597 tgataccatcttagaaatggtggttgggcctaacacaaccc 27897637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 32356414 - 32356386
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  32356414 gattgcccccacttataaacacattgtca 32356386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 33381184 - 33381232
Alignment:
Q  12 ataccatcttagaaatcatgattgggcctaacacaacc-cacaaaactt 59  Q
    ||||||||||||||||| || ||||| ||||||||||| ||||||||||    
T  33381184 ataccatcttagaaatcgtggttgggactaacacaacctcacaaaactt 33381232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 48243427 - 48243524
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactta----ataaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||| |||||||| ||||| |||||||||||| |||||||   |||     || | ||||||||||||||||||||||||||||||||    
T  48243427 ctgataccatcttaaaaatcatggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaacacattgtcaggc 48243524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 6634940 - 6634852
Alignment:
Q  18 tcttagaaatcatgattgggcctaacacaa-cccacaaaacttactta----ataaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||| ||||||||||||||| |||||||||||  ||||     | | ||||||||||||||||||||| ||||||||||    
T  6634940 tcttagaaatcatggttgggcctaacacaaccccacaaaactagcttatgaggtgaggattgcccccacttataaacaaattgtcaggc 6634852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 25620230 - 25620134
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||   |||      | | |||||||||||||||||||||||||||||||    
T  25620230 ctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagg 25620134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 29469699 - 29469602
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||| ||||||||| || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||||    
T  29469699 ctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 29469602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 10882229 - 10882270
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  10882229 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 10882270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 33996301 - 33996350
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 57  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||    
T  33996301 ctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaac 33996350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 40121914 - 40121955
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  40121914 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 40121955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 4886423 - 4886383
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacc 49  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  4886423 ctgataccatcttagaaatcgtggttgggcctaacacaacc 4886383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 21821900 - 21821852
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaa 56  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||    
T  21821900 ctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaa 21821852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 21861388 - 21861291
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||  || ||||||||||||||| ||||||||||   ||  |||  | | |||||||| |||||||||||||||||||||||    
T  21861388 ctgataccatcttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacattgtcaggc 21861291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 21861557 - 21861526
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  21861557 gattgcccccacttataaacacattgtcaggc 21861526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 29469868 - 29469837
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  29469868 gattgcccccacttataaacacattgtcaggc 29469837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 31485480 - 31485511
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  31485480 gattgcccccacttataaacacattgtcaggc 31485511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 34027712 - 34027624
Alignment:
Q  18 tcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||| |||||||||||||||||| ||||||||||   |||    | | | ||||||||||||||||||||| ||||||||||    
T  34027712 tcttagaaatcgtgattgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgcccccacttataaacaaattgtcaggc 34027624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 36277282 - 36277313
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  36277282 gattgcccccacttataaacacattgtcaggc 36277313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 43688215 - 43688246
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  43688215 gattgcccccacttataaacacattgtcaggc 43688246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 31257257 - 31257352
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||||||||   |||    | ||| ||||||||||||||||||| | ||||||||    
T  31257257 ctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaattaaggattgcccccacttataaataaattgtcag 31257352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 2404230 - 2404259
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  2404230 gattgcccccacttataaacacattgtcag 2404259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 3038082 - 3038115
Alignment:
Q  17 atcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||| ||||||||||||||||||    
T  3038082 atcttagaaatcatggttgggcctaacacaaccc 3038115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 3520096 - 3520125
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  3520096 gattgcccccacttataaacacattgtcag 3520125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 4454804 - 4454775
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  4454804 gattgcccccacttataaacacattgtcag 4454775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 26239972 - 26240001
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  26239972 gattgcccccacttataaacacattgtcag 26240001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 26562127 - 26562160
Alignment:
Q  68 aagattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||| ||||||||||    
T  26562127 aagattgcccccacttataaacaaattgtcaggc 26562160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 33834285 - 33834244
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  33834285 ctgataccatcttagaaatggtggttgggcctaacacaaccc 33834244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 36993072 - 36993105
Alignment:
Q  17 atcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||| ||||||||||||||||||    
T  36993072 atcttagaaatcatggttgggcctaacacaaccc 36993105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 48243117 - 48243146
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  48243117 gattgcccccacttataaacacattgtcag 48243146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 7786253 - 7786285
Alignment:
Q  18 tcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||| ||||||||||||||||||    
T  7786253 tcttagaaatcatggttgggcctaacacaaccc 7786285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 35308202 - 35308230
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  35308202 gattgcccccacttataaacacattgtca 35308230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 9705114 - 9705017
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttacttaata----aagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||  || |||||||||||||||||| |||||||  ||||   |    | ||||||||||||||||||||||||||||||||    
T  9705114 ctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataaacacattgtcaggc 9705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 13353295 - 13353198
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||  || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||||    
T  13353295 ctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 13353198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 33796420 - 33796323
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||  || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||||    
T  33796420 ctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcaggc 33796323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 4868803 - 4868844
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  4868803 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 4868844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 4868633 - 4868664
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  4868633 gattgcccccacttataaacacattgtcaggc 4868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 31961206 - 31961175
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  31961206 gattgcccccacttataaacacattgtcaggc 31961175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 8001540 - 8001582
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccca 51  Q
    |||||||||||||||||||  || |||||||||||||||||||    
T  8001540 ctgataccatcttagaaattgtggttgggcctaacacaaccca 8001582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 16570244 - 16570157
Alignment:
Q  18 tcttagaaatcatgattgggcctaacacaa-cccacaaaacttacttaata----aagattgcccccacttataaacacattgtcagg 100  Q
    |||||||||||||| ||||||||||||||| ||||||||||  ||||  ||    | |||| ||||| ||||||||||||||||||||    
T  16570244 tcttagaaatcatggttgggcctaacacaaccccacaaaaccgacttgttacgtgaggattacccccgcttataaacacattgtcagg 16570157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 3680106 - 3680065
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  3680106 ctgataccatcttagaaattgtggttgggcctaacacaaccc 3680065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 3680274 - 3680245
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  3680274 gattgcccccacttataaacacattgtcag 3680245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 6542999 - 6543028
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  6542999 gattgcccccacttataaacacattgtcag 6543028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 8026483 - 8026442
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  8026483 ctgataccatattagaaatcgtggttgggcctaacacaaccc 8026442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 12330169 - 12330218
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 57  Q
    |||||||||| ||||||||| || ||||||||||||||||| ||||||||    
T  12330169 ctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaac 12330218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 15082134 - 15082183
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 57  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||||||||    
T  15082134 ctgataccatattagaaatcgtgtttgggcctaacacaatcccacaaaac 15082183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 20373664 - 20373623
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  20373664 ctgataccatcttataaatcgtggttgggcctaacacaaccc 20373623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 27653311 - 27653262
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaac 57  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||||||||    
T  27653311 ctgataccatattagaaatcgtggttgggcctaacacaatcccacaaaac 27653262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 30256672 - 30256631
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||| |||||||||| || ||||||||||||||||||    
T  30256672 ctgataccaccttagaaatcgtggttgggcctaacacaaccc 30256631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 30256906 - 30256865
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  30256906 ctgataccatattagaaatcgtggttgggcctaacacaaccc 30256865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 33494633 - 33494592
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  33494633 ctgataccatcttagaaatggtggttgggcctaacacaaccc 33494592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 11085670 - 11085626
Alignment:
Q  14 accatcttagaaatcatgattgggcctaacacaacc-cacaaaac 57  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||    
T  11085670 accatcttagaaatcgtgattggacctaacacaaccgcacaaaac 11085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 52827415 - 52827455
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacc 49  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  52827415 ctgataccatcttagaaatcatggttgggcctaacacaacc 52827455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 52559661 - 52559565
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcagg 100  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||||   |||      | | |||||||||||||||||||||||||||||||    
T  52559661 ctgatactatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcagg 52559565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 44118915 - 44118986
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggcgggccatctcttatatgatgt-ggactctttaacatgtttttct 144  Q
    |||| ||||||||||||||||||||||||    |||||||||||||  ||||| |||||||||||||| |||||||    
T  44118915 gattacccccacttataaacacattgtca----ggccatctcttatccgatgtgggactctttaacatttttttct 44118986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 12869253 - 12869294
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  12869253 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 12869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 17111657 - 17111616
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  17111657 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 17111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 22231298 - 22231339
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  22231298 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 22231339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 35788753 - 35788712
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  35788753 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 35788712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 40716611 - 40716652
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  40716611 ctgataccatcttagaaaccatggttgggcctaacacaaccc 40716652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 40717431 - 40717472
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  40717431 ctgataccatcttagaaatcgtggttgggcctaacacaaccc 40717472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 9279255 - 9279224
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  9279255 gattgcccccacttataaacacattgtcaggc 9279224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 11036802 - 11036833
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  11036802 gattgcccccacttataaacacattgtcaggc 11036833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 22863502 - 22863471
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  22863502 gattgcccccacttataaacacattgtcaggc 22863471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 27634137 - 27634168
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  27634137 gattgcccccacttataaacacattgtcaggc 27634168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 28245582 - 28245613
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  28245582 gattgcccccacttataaacacattgtcaggc 28245613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 31254463 - 31254494
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  31254463 gattgcccccacttataaacacattgtcaggc 31254494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 35788687 - 35788656
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  35788687 gattgcccccacttataaacacattgtcaggc 35788656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 35788922 - 35788891
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  35788922 gattgcccccacttataaacacattgtcaggc 35788891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 39902619 - 39902650
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  39902619 gattgcccccacttataaacacattgtcaggc 39902650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 1518258 - 1518217
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || || |||||||||||||||    
T  1518258 ctgataccatcttagaaatcgtggttaggcctaacacaaccc 1518217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 9685492 - 9685443
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaacc-cacaaaac 57  Q
    |||||||||| ||||||||| || ||||||||||||||||| ||||||||    
T  9685492 ctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaac 9685443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 14783177 - 14783218
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  14783177 ctgataccatattagaaatcgtggttgggcctaacacaaccc 14783218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 24513350 - 24513391
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||| ||| ||||||||| |||||||||||||||||||||    
T  24513350 ctgatatcatgttagaaatcgtgattgggcctaacacaaccc 24513391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 25052946 - 25052905
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  25052946 ctgataccatgttagaaatcgtggttgggcctaacacaaccc 25052905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 35609701 - 35609742
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||||||||||||||||||||| ||||| || |||||||||    
T  35609701 ctgataccatcttagaaatcatggttgggtcttacacaaccc 35609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 35645821 - 35645850
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  35645821 gattgcccccacttataaacacattgtcag 35645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 50543320 - 50543361
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||| ||||||||||||| || ||||||||||||||||||    
T  50543320 ctgataacatcttagaaatcgtggttgggcctaacacaaccc 50543361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 50543557 - 50543606
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaac-ccacaaaac 57  Q
    |||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  50543557 ctgatatcatcttagaaatcgtggttgggcctaacacaactccacaaaac 50543606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 53828513 - 53828554
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  53828513 ctgataccatcttagaaattgtggttgggcctaacacaaccc 53828554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 7926643 - 7926611
Alignment:
Q  18 tcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||| ||||||||||||||||||    
T  7926643 tcttagaaatcatggttgggcctaacacaaccc 7926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 23209934 - 23209894
Alignment:
Q  10 tgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    ||||| ||||||||||||| |||||||||||||| ||||||    
T  23209934 tgatatcatcttagaaatcgtgattgggcctaactcaaccc 23209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 28246141 - 28246169
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  28246141 gattgcccccacttataaacacattgtca 28246169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 35796798 - 35796826
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  35796798 gattgcccccacttataaacacattgtca 35796826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 51332 - 51236
Alignment:
Q  7 cactgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||  |||||| || |||||||| ||||||||||| ||||      | | |||||||||||||||||||||||||||||    
T  51332 cactgataccatcttagaaattgtgattgagcataacacaaccccacaaaactgacttgtgaggtgaggattgcccccacttataaacacattgtca 51236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 81936 - 81839
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttact--taa--taaagattgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||  |||  |||  | || |||| ||||||||||||||| ||||||||||    
T  81936 ctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtaaggtgaaaattgtccccacttataaacatattgtcaggc 81839  T

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Target: scaffold0692 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 5744 - 5839
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaa-cccacaaaacttactt----aataaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||| || ||||||||||||||| ||| ||||||   |||     || | ||||||||||||||||||||||||||||||    
T  5744 ctgataccatcttagaaatcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcag 5839  T

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Target: scaffold0692; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 5600 - 5628
Alignment:
Q  70 gattgcccccacttataaacacattgtca 98  Q
    |||||||||||||||||||||||||||||    
T  5600 gattgcccccacttataaacacattgtca 5628  T

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Target: scaffold0519 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 2010 - 1915
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc-acaaaacttactt--aa--taaagattgcccccacttataaacacattgtcag 99  Q
    |||||||||||||||||||  || |||||||||||||||||| |||||||   |||  ||  | | ||||||||||||||||||||||||||||||    
T  2010 ctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 1915  T

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Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 2179 - 2148
Alignment:
Q  70 gattgcccccacttataaacacattgtcaggc 101  Q
    ||||||||||||||||||||||||||||||||    
T  2179 gattgcccccacttataaacacattgtcaggc 2148  T

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Target: scaffold0766 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 6302 - 6273
Alignment:
Q  70 gattgcccccacttataaacacattgtcag 99  Q
    ||||||||||||||||||||||||||||||    
T  6302 gattgcccccacttataaacacattgtcag 6273  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 3461 - 3502
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| |||||||| ||||||||||||    
T  3461 ctgataccatattagaaatcgtgattgggtctaacacaaccc 3502  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 14397 - 14356
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||| | || ||||||||||||||||||    
T  14397 ctgataccatcttagaaaacgtggttgggcctaacacaaccc 14356  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 5749 - 5708
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  5749 ctgataccatcttagaaatcgtggttgggtctaacacaaccc 5708  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 56553 - 56512
Alignment:
Q  9 ctgataccatcttagaaatcatgattgggcctaacacaaccc 50  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  56553 ctgataccatattagaaatcgtggttgggcctaacacaaccc 56512  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 288656 - 288696
Alignment:
Q  18 tcttagaaatcatgattgggcctaacacaac-ccacaaaac 57  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  288656 tcttagaaatcatggttgggcctaacacaactccacaaaac 288696  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 429898 - 429870
Alignment:
Q  73 tgcccccacttataaacacattgtcaggc 101  Q
    |||||||||||||||||||||||||||||    
T  429898 tgcccccacttataaacacattgtcaggc 429870  T

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